Query 038707
Match_columns 597
No_of_seqs 458 out of 3177
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 02:33:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038707.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038707hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.6E-54 3.4E-59 446.1 27.3 289 303-593 61-353 (361)
2 KOG0581 Mitogen-activated prot 100.0 3E-47 6.5E-52 370.7 20.2 247 319-588 81-335 (364)
3 KOG0192 Tyrosine kinase specif 100.0 4.2E-47 9E-52 388.2 21.3 259 319-596 43-307 (362)
4 KOG0575 Polo-like serine/threo 100.0 3.2E-47 7E-52 390.8 19.6 247 317-587 18-268 (592)
5 KOG0197 Tyrosine kinases [Sign 100.0 2.4E-47 5.1E-52 388.3 16.7 256 319-595 208-464 (468)
6 KOG0595 Serine/threonine-prote 100.0 1.7E-46 3.7E-51 368.3 18.4 204 316-527 9-221 (429)
7 KOG0615 Serine/threonine prote 100.0 6E-46 1.3E-50 363.7 16.8 253 315-587 170-436 (475)
8 KOG0591 NIMA (never in mitosis 100.0 6.4E-47 1.4E-51 353.1 9.3 257 317-589 19-282 (375)
9 KOG1026 Nerve growth factor re 100.0 5E-45 1.1E-49 388.6 14.6 260 316-594 485-764 (774)
10 KOG0598 Ribosomal protein S6 k 100.0 1.3E-44 2.8E-49 352.2 14.3 243 316-581 24-270 (357)
11 KOG0198 MEKK and related serin 100.0 1.8E-43 3.8E-48 350.7 14.6 255 316-589 16-277 (313)
12 KOG0582 Ste20-like serine/thre 100.0 1.4E-42 3E-47 343.2 20.2 261 316-587 25-292 (516)
13 KOG0578 p21-activated serine/t 100.0 3E-43 6.5E-48 358.9 15.6 250 317-588 273-523 (550)
14 KOG0600 Cdc2-related protein k 100.0 3.1E-43 6.7E-48 352.9 15.1 266 316-587 116-399 (560)
15 KOG0593 Predicted protein kina 100.0 2.9E-43 6.3E-48 331.9 13.7 264 317-587 2-283 (396)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.6E-42 1.2E-46 355.3 19.9 261 316-594 6-336 (338)
17 KOG0661 MAPK related serine/th 100.0 2.9E-43 6.4E-48 350.6 9.5 263 315-588 8-291 (538)
18 KOG0583 Serine/threonine prote 100.0 1.4E-41 3.1E-46 350.8 20.4 249 314-586 14-273 (370)
19 KOG0592 3-phosphoinositide-dep 100.0 5.6E-42 1.2E-46 346.5 15.6 252 314-588 70-338 (604)
20 KOG0659 Cdk activating kinase 100.0 6.5E-42 1.4E-46 317.7 14.0 262 317-588 2-281 (318)
21 KOG1095 Protein tyrosine kinas 100.0 3.3E-42 7.2E-47 379.8 14.3 261 316-595 691-964 (1025)
22 KOG0611 Predicted serine/threo 100.0 7.2E-42 1.6E-46 333.0 12.4 247 316-588 52-303 (668)
23 KOG0616 cAMP-dependent protein 100.0 3E-41 6.5E-46 317.8 16.0 236 317-579 44-283 (355)
24 KOG0194 Protein tyrosine kinas 100.0 9.7E-42 2.1E-46 352.9 13.5 263 312-595 152-423 (474)
25 KOG0196 Tyrosine kinase, EPH ( 100.0 2.8E-42 6.1E-47 360.3 9.2 255 319-594 631-893 (996)
26 KOG0597 Serine-threonine prote 100.0 1.9E-41 4.1E-46 342.6 14.5 246 317-587 2-250 (808)
27 PHA02988 hypothetical protein; 100.0 1.1E-40 2.4E-45 336.6 20.3 246 323-594 26-281 (283)
28 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-40 2.5E-45 333.5 19.7 256 316-592 4-265 (266)
29 KOG4721 Serine/threonine prote 100.0 7.3E-42 1.6E-46 345.3 10.7 240 322-592 129-368 (904)
30 KOG0201 Serine/threonine prote 100.0 4.2E-42 9.1E-47 339.8 8.6 249 317-588 13-263 (467)
31 KOG0605 NDR and related serine 100.0 4E-41 8.6E-46 340.7 15.9 247 315-581 139-435 (550)
32 KOG2345 Serine/threonine prote 100.0 2.5E-41 5.5E-46 310.8 11.3 265 315-593 19-301 (302)
33 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-40 6.2E-45 329.4 20.0 256 316-592 5-261 (261)
34 KOG0193 Serine/threonine prote 100.0 3.9E-41 8.5E-46 344.3 13.5 267 308-594 383-655 (678)
35 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-40 5.6E-45 347.3 20.0 259 316-592 34-374 (375)
36 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-40 8.3E-45 336.4 20.7 264 316-591 4-304 (304)
37 cd05106 PTKc_CSF-1R Catalytic 100.0 2.6E-40 5.7E-45 346.9 19.4 260 316-593 37-373 (374)
38 cd05052 PTKc_Abl Catalytic dom 100.0 4.9E-40 1.1E-44 328.3 20.4 255 317-592 6-262 (263)
39 KOG0585 Ca2+/calmodulin-depend 100.0 6.6E-41 1.4E-45 333.3 13.4 260 307-588 87-372 (576)
40 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.4E-40 5.2E-45 329.9 17.4 257 315-592 4-261 (261)
41 cd05068 PTKc_Frk_like Catalyti 100.0 5E-40 1.1E-44 327.8 19.5 256 316-592 5-261 (261)
42 KOG0588 Serine/threonine prote 100.0 1.4E-40 3.1E-45 342.8 15.7 247 317-588 12-263 (786)
43 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.8E-40 1.3E-44 326.4 19.5 252 317-590 4-256 (256)
44 cd05631 STKc_GRK4 Catalytic do 100.0 6.8E-40 1.5E-44 331.4 20.0 252 318-588 1-261 (285)
45 cd05048 PTKc_Ror Catalytic Dom 100.0 8.7E-40 1.9E-44 330.0 20.5 257 317-592 5-283 (283)
46 cd05612 STKc_PRKX_like Catalyt 100.0 4.3E-40 9.2E-45 333.9 17.2 245 317-588 1-254 (291)
47 cd07848 STKc_CDKL5 Catalytic d 100.0 4E-40 8.6E-45 333.3 16.9 262 317-587 1-283 (287)
48 KOG4278 Protein tyrosine kinas 100.0 1.1E-40 2.3E-45 339.4 12.5 263 311-594 261-525 (1157)
49 KOG0694 Serine/threonine prote 100.0 3E-40 6.4E-45 343.3 15.8 245 313-582 364-613 (694)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.3E-40 1.4E-44 339.3 18.2 253 317-588 1-257 (333)
51 cd05093 PTKc_TrkB Catalytic do 100.0 1.7E-39 3.7E-44 329.0 21.0 260 317-595 5-282 (288)
52 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-40 6.2E-45 329.3 14.7 249 321-589 3-259 (259)
53 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-39 2.9E-44 328.1 19.5 256 317-591 5-280 (280)
54 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-39 2.8E-44 335.4 19.8 241 323-587 1-250 (323)
55 PTZ00263 protein kinase A cata 100.0 1E-39 2.2E-44 336.9 19.1 245 317-588 18-271 (329)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 2.3E-39 5E-44 334.6 21.3 262 316-588 4-301 (331)
57 cd05033 PTKc_EphR Catalytic do 100.0 3.2E-39 6.8E-44 323.0 21.5 255 317-592 4-265 (266)
58 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-39 3.9E-44 323.0 19.0 252 317-590 4-256 (256)
59 cd05094 PTKc_TrkC Catalytic do 100.0 3.2E-39 7E-44 327.5 21.0 260 317-595 5-285 (291)
60 KOG0580 Serine/threonine prote 100.0 2.6E-40 5.5E-45 302.9 11.1 249 316-588 21-273 (281)
61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1E-39 2.2E-44 330.6 16.7 261 317-587 5-284 (288)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 3E-39 6.5E-44 340.6 20.9 263 314-594 34-399 (400)
63 KOG0589 Serine/threonine prote 100.0 4.4E-40 9.6E-45 334.3 13.4 251 317-588 4-258 (426)
64 KOG1025 Epidermal growth facto 100.0 1.2E-39 2.6E-44 341.5 16.9 252 321-594 700-959 (1177)
65 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.5E-39 9.7E-44 320.7 20.2 254 316-591 5-259 (260)
66 PHA03212 serine/threonine kina 100.0 7.8E-39 1.7E-43 337.1 22.8 259 316-587 91-375 (391)
67 KOG0660 Mitogen-activated prot 100.0 5.7E-40 1.2E-44 318.6 12.9 269 313-588 18-310 (359)
68 cd08228 STKc_Nek6 Catalytic do 100.0 5.3E-39 1.1E-43 321.4 20.3 260 317-593 2-266 (267)
69 cd05062 PTKc_IGF-1R Catalytic 100.0 3.7E-39 8E-44 324.5 19.3 258 315-591 4-277 (277)
70 cd05108 PTKc_EGFR Catalytic do 100.0 4.3E-39 9.4E-44 330.5 20.2 256 317-594 7-270 (316)
71 cd05043 PTK_Ryk Pseudokinase d 100.0 6.3E-39 1.4E-43 323.3 20.9 262 316-596 5-280 (280)
72 KOG3653 Transforming growth fa 100.0 5.5E-39 1.2E-43 319.8 20.0 267 317-594 210-505 (534)
73 cd05585 STKc_YPK1_like Catalyt 100.0 3.6E-39 7.9E-44 330.4 19.4 239 325-587 1-246 (312)
74 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.4E-39 7.4E-44 325.9 18.8 264 317-593 4-284 (284)
75 PTZ00267 NIMA-related protein 100.0 3.6E-39 7.9E-44 348.7 20.2 252 317-587 67-322 (478)
76 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.3E-39 1.1E-43 320.2 19.6 255 316-592 5-260 (260)
77 cd05059 PTKc_Tec_like Catalyti 100.0 3.9E-39 8.4E-44 320.5 18.6 251 318-590 5-256 (256)
78 cd05071 PTKc_Src Catalytic dom 100.0 8.4E-39 1.8E-43 319.3 20.9 254 317-592 6-260 (262)
79 KOG1989 ARK protein kinase fam 100.0 1.7E-39 3.7E-44 348.0 16.8 261 313-594 33-313 (738)
80 cd05053 PTKc_FGFR Catalytic do 100.0 6.2E-39 1.3E-43 325.5 20.1 263 312-593 7-292 (293)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 4.8E-39 1E-43 331.7 19.4 242 323-588 1-251 (328)
82 cd05054 PTKc_VEGFR Catalytic d 100.0 6.2E-39 1.3E-43 332.0 20.2 261 316-594 6-335 (337)
83 cd05090 PTKc_Ror1 Catalytic do 100.0 7E-39 1.5E-43 323.6 20.0 256 317-591 5-282 (283)
84 cd05595 STKc_PKB_beta Catalyti 100.0 4.2E-39 9.1E-44 331.5 18.5 241 323-587 1-250 (323)
85 cd05089 PTKc_Tie1 Catalytic do 100.0 9.7E-39 2.1E-43 324.9 20.8 257 317-594 2-277 (297)
86 PTZ00426 cAMP-dependent protei 100.0 4.7E-39 1E-43 333.0 18.6 246 316-588 29-284 (340)
87 PLN00113 leucine-rich repeat r 100.0 4.7E-38 1E-42 369.6 29.4 265 313-594 686-953 (968)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 7.7E-39 1.7E-43 330.9 19.8 263 316-587 4-298 (333)
89 cd07862 STKc_CDK6 Catalytic do 100.0 5.5E-39 1.2E-43 325.5 18.2 261 317-587 1-286 (290)
90 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.9E-39 1.9E-43 322.8 19.5 267 319-593 6-282 (283)
91 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-38 4.2E-43 318.2 21.7 255 319-592 1-272 (273)
92 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-38 2.8E-43 322.8 20.6 258 318-594 1-288 (290)
93 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-38 3.7E-43 314.5 20.9 247 323-590 1-249 (250)
94 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-38 2.5E-43 316.1 19.8 248 323-591 1-252 (252)
95 KOG0663 Protein kinase PITSLRE 100.0 2.9E-39 6.2E-44 308.8 14.5 261 317-587 76-360 (419)
96 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-38 2.6E-43 325.2 20.3 263 316-587 4-287 (303)
97 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.9E-39 6.3E-44 336.7 15.9 252 317-588 1-285 (350)
98 cd05614 STKc_MSK2_N N-terminal 100.0 7.5E-39 1.6E-43 331.1 18.8 251 318-587 1-266 (332)
99 cd05596 STKc_ROCK Catalytic do 100.0 6.2E-39 1.3E-43 336.2 18.4 254 315-588 41-304 (370)
100 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-38 5.9E-43 316.0 22.2 260 317-593 2-266 (267)
101 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.3E-39 1.2E-43 332.9 17.4 264 318-588 1-290 (338)
102 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-38 3.2E-43 320.7 19.8 256 317-591 5-280 (280)
103 cd05588 STKc_aPKC Catalytic do 100.0 2.6E-38 5.7E-43 326.4 22.0 248 323-587 1-261 (329)
104 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.7E-38 3.6E-43 319.8 20.0 257 316-591 5-277 (277)
105 cd05601 STKc_CRIK Catalytic do 100.0 5.3E-39 1.1E-43 331.9 16.7 252 317-587 1-262 (330)
106 cd05584 STKc_p70S6K Catalytic 100.0 1.7E-38 3.7E-43 327.0 20.4 241 323-587 2-255 (323)
107 cd05069 PTKc_Yes Catalytic dom 100.0 2.5E-38 5.4E-43 315.4 20.9 253 317-591 6-259 (260)
108 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-38 3E-43 325.4 19.4 261 316-595 17-302 (307)
109 cd08229 STKc_Nek7 Catalytic do 100.0 2E-38 4.3E-43 317.2 20.1 260 317-593 2-266 (267)
110 cd05075 PTKc_Axl Catalytic dom 100.0 2.7E-38 5.9E-43 317.1 21.2 255 319-592 1-271 (272)
111 cd05621 STKc_ROCK2 Catalytic d 100.0 9.3E-39 2E-43 334.5 18.5 254 315-588 41-304 (370)
112 cd05039 PTKc_Csk_like Catalyti 100.0 2E-38 4.3E-43 315.3 19.7 251 316-592 5-256 (256)
113 cd05116 PTKc_Syk Catalytic dom 100.0 3E-38 6.4E-43 314.3 20.9 245 324-591 2-254 (257)
114 cd05111 PTK_HER3 Pseudokinase 100.0 2.7E-38 5.9E-43 318.7 20.9 257 317-595 7-271 (279)
115 cd05088 PTKc_Tie2 Catalytic do 100.0 1.9E-38 4.2E-43 323.7 20.0 257 317-594 7-282 (303)
116 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-38 6E-43 316.4 20.7 256 316-592 4-267 (268)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-38 8.1E-43 325.2 22.3 243 323-582 1-250 (329)
118 cd05599 STKc_NDR_like Catalyti 100.0 9E-39 2E-43 334.8 18.0 251 317-587 1-295 (364)
119 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.6E-38 3.4E-43 334.9 19.6 265 311-593 31-400 (401)
120 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-38 2.9E-43 317.3 18.1 256 315-591 4-260 (261)
121 cd05073 PTKc_Hck Catalytic dom 100.0 2.9E-38 6.2E-43 315.0 20.3 255 316-592 5-260 (260)
122 PLN00034 mitogen-activated pro 100.0 1.2E-38 2.7E-43 332.2 18.3 248 317-588 74-328 (353)
123 cd05594 STKc_PKB_alpha Catalyt 100.0 9.2E-39 2E-43 329.3 17.1 242 323-588 1-252 (325)
124 cd05055 PTKc_PDGFR Catalytic d 100.0 3E-38 6.6E-43 322.1 20.7 259 315-592 33-301 (302)
125 PTZ00283 serine/threonine prot 100.0 7.5E-39 1.6E-43 346.6 17.0 259 311-588 26-297 (496)
126 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-38 4.7E-43 333.7 20.0 252 318-588 2-305 (381)
127 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-38 3.1E-43 321.2 17.9 255 318-591 6-282 (283)
128 cd05056 PTKc_FAK Catalytic dom 100.0 3.9E-38 8.4E-43 315.8 20.9 258 316-595 5-268 (270)
129 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.9E-38 6.3E-43 322.5 20.3 262 315-595 13-299 (304)
130 cd05066 PTKc_EphR_A Catalytic 100.0 4.4E-38 9.5E-43 314.9 21.1 255 317-592 4-266 (267)
131 cd05589 STKc_PKN Catalytic dom 100.0 2E-38 4.3E-43 326.7 19.0 244 319-587 1-256 (324)
132 cd05115 PTKc_Zap-70 Catalytic 100.0 4.4E-38 9.6E-43 313.2 20.7 247 324-592 2-255 (257)
133 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-38 3E-43 310.2 16.5 268 317-592 11-308 (323)
134 KOG4257 Focal adhesion tyrosin 100.0 5.6E-39 1.2E-43 327.5 14.3 256 317-594 389-651 (974)
135 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-38 4.9E-43 325.6 19.1 236 323-582 1-241 (320)
136 cd05032 PTKc_InsR_like Catalyt 100.0 2.4E-38 5.3E-43 318.3 18.8 257 316-591 5-277 (277)
137 cd05061 PTKc_InsR Catalytic do 100.0 3E-38 6.5E-43 319.8 19.5 260 315-593 4-279 (288)
138 cd06625 STKc_MEKK3_like Cataly 100.0 4.2E-38 9.2E-43 314.0 20.3 251 317-588 2-260 (263)
139 cd05591 STKc_nPKC_epsilon Cata 100.0 3.2E-38 6.9E-43 324.8 19.7 242 323-588 1-254 (321)
140 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-38 3.2E-43 334.6 17.6 252 317-588 1-305 (377)
141 cd08529 STKc_FA2-like Catalyti 100.0 4.8E-38 1E-42 312.2 20.3 250 318-588 1-253 (256)
142 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-38 6.1E-43 330.8 19.5 252 317-588 1-293 (363)
143 cd05592 STKc_nPKC_theta_delta 100.0 2.7E-38 5.8E-43 324.5 18.9 240 323-586 1-246 (316)
144 cd05617 STKc_aPKC_zeta Catalyt 100.0 7E-38 1.5E-42 323.0 21.9 243 323-582 1-248 (327)
145 cd05605 STKc_GRK4_like Catalyt 100.0 3.8E-38 8.2E-43 318.6 19.5 252 318-588 1-261 (285)
146 KOG1094 Discoidin domain recep 100.0 6E-39 1.3E-43 325.6 13.4 263 317-592 538-804 (807)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 3E-38 6.5E-43 316.0 18.3 254 317-589 9-266 (267)
148 cd05097 PTKc_DDR_like Catalyti 100.0 4.6E-38 1E-42 319.6 20.0 263 317-591 5-295 (295)
149 cd05047 PTKc_Tie Catalytic dom 100.0 6.7E-38 1.5E-42 314.2 20.9 250 323-593 1-269 (270)
150 cd05587 STKc_cPKC Catalytic do 100.0 4E-38 8.7E-43 324.5 19.6 241 318-582 1-246 (324)
151 cd05109 PTKc_HER2 Catalytic do 100.0 6.8E-38 1.5E-42 315.7 20.8 257 317-595 7-271 (279)
152 cd05065 PTKc_EphR_B Catalytic 100.0 5.7E-38 1.2E-42 314.4 20.1 255 317-592 4-268 (269)
153 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-38 7E-43 331.5 19.0 261 318-588 1-288 (372)
154 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.6E-38 1.4E-42 321.4 20.9 259 317-594 12-295 (314)
155 cd05625 STKc_LATS1 Catalytic d 100.0 2.2E-38 4.8E-43 334.0 17.7 250 318-587 2-304 (382)
156 KOG0599 Phosphorylase kinase g 100.0 9.3E-39 2E-43 297.0 12.8 255 313-588 13-283 (411)
157 cd05051 PTKc_DDR Catalytic dom 100.0 8.4E-38 1.8E-42 317.6 21.2 264 316-591 4-296 (296)
158 cd05622 STKc_ROCK1 Catalytic d 100.0 5.8E-38 1.3E-42 328.8 20.5 258 311-588 37-304 (371)
159 cd05082 PTKc_Csk Catalytic dom 100.0 6.2E-38 1.3E-42 311.8 19.6 249 317-592 6-256 (256)
160 KOG0574 STE20-like serine/thre 100.0 2.7E-40 5.8E-45 310.9 2.2 248 319-588 35-283 (502)
161 cd05582 STKc_RSK_N N-terminal 100.0 2E-38 4.4E-43 325.8 16.2 238 323-584 2-245 (318)
162 cd05616 STKc_cPKC_beta Catalyt 100.0 6.1E-38 1.3E-42 322.9 19.5 241 318-582 1-246 (323)
163 cd05112 PTKc_Itk Catalytic dom 100.0 5.5E-38 1.2E-42 312.0 18.5 252 317-590 4-256 (256)
164 cd08219 STKc_Nek3 Catalytic do 100.0 7E-38 1.5E-42 311.1 19.2 250 318-588 1-252 (255)
165 cd05607 STKc_GRK7 Catalytic do 100.0 8.7E-38 1.9E-42 314.6 20.0 247 325-589 1-251 (277)
166 cd00192 PTKc Catalytic domain 100.0 1.1E-37 2.4E-42 310.0 20.5 249 323-590 1-262 (262)
167 cd05608 STKc_GRK1 Catalytic do 100.0 7.1E-38 1.5E-42 315.8 19.2 246 325-587 1-256 (280)
168 cd05598 STKc_LATS Catalytic do 100.0 1.9E-38 4E-43 333.9 15.6 251 318-588 2-301 (376)
169 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.8E-38 1.7E-42 316.1 19.4 262 317-592 4-283 (284)
170 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-37 2.9E-42 316.4 21.2 263 317-591 5-296 (296)
171 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.9E-38 8.5E-43 322.3 17.2 261 317-587 6-285 (309)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-37 4.5E-42 312.2 22.2 251 317-588 1-253 (279)
173 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-37 3.6E-42 307.6 21.0 248 323-591 1-251 (251)
174 KOG0658 Glycogen synthase kina 100.0 9.4E-39 2E-43 310.6 11.7 265 316-593 23-313 (364)
175 cd06654 STKc_PAK1 Catalytic do 100.0 8.5E-38 1.8E-42 317.9 19.2 250 317-588 20-270 (296)
176 cd05620 STKc_nPKC_delta Cataly 100.0 6.1E-38 1.3E-42 321.9 18.2 240 323-586 1-246 (316)
177 cd05619 STKc_nPKC_theta Cataly 100.0 8.9E-38 1.9E-42 320.5 19.4 240 323-586 1-246 (316)
178 cd05575 STKc_SGK Catalytic dom 100.0 6.2E-38 1.3E-42 322.9 18.3 237 323-583 1-242 (323)
179 cd05570 STKc_PKC Catalytic dom 100.0 6.3E-38 1.4E-42 322.1 18.3 241 323-587 1-251 (318)
180 cd05060 PTKc_Syk_like Catalyti 100.0 1.6E-37 3.4E-42 309.0 20.4 248 323-593 1-256 (257)
181 cd05058 PTKc_Met_Ron Catalytic 100.0 1.8E-37 3.8E-42 309.4 20.8 251 323-594 1-261 (262)
182 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-37 2.5E-42 323.5 20.1 261 316-594 6-341 (343)
183 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-37 2.5E-42 315.5 19.6 257 316-591 4-288 (288)
184 cd05597 STKc_DMPK_like Catalyt 100.0 1.5E-37 3.2E-42 321.1 20.7 255 317-588 1-266 (331)
185 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-37 2.3E-42 322.8 19.6 261 315-594 10-295 (334)
186 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-37 3.3E-42 320.5 20.6 253 314-588 32-293 (382)
187 cd05040 PTKc_Ack_like Catalyti 100.0 1.4E-37 3.1E-42 309.1 19.4 248 323-590 1-256 (257)
188 cd05046 PTK_CCK4 Pseudokinase 100.0 1.3E-37 2.9E-42 312.7 19.2 257 317-591 5-275 (275)
189 PF00069 Pkinase: Protein kina 100.0 8.8E-38 1.9E-42 310.9 17.7 250 319-587 1-256 (260)
190 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-37 2.9E-42 318.2 19.5 263 317-588 1-287 (308)
191 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-37 2.9E-42 314.3 19.1 263 318-587 1-281 (285)
192 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-37 2.3E-42 314.7 18.4 263 317-593 4-284 (284)
193 cd05602 STKc_SGK1 Catalytic do 100.0 9.9E-38 2.1E-42 321.7 18.3 243 323-589 1-248 (325)
194 PRK13184 pknD serine/threonine 100.0 1.7E-37 3.7E-42 345.2 21.4 260 317-593 2-291 (932)
195 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.8E-37 6E-42 308.3 20.7 240 323-590 1-262 (262)
196 cd06624 STKc_ASK Catalytic dom 100.0 2.8E-37 6.1E-42 309.2 20.7 259 312-588 3-265 (268)
197 cd05630 STKc_GRK6 Catalytic do 100.0 2.1E-37 4.6E-42 313.1 19.9 250 319-587 2-260 (285)
198 cd05604 STKc_SGK3 Catalytic do 100.0 7.9E-38 1.7E-42 322.4 17.1 242 323-588 1-247 (325)
199 cd05057 PTKc_EGFR_like Catalyt 100.0 3.4E-37 7.5E-42 310.5 21.2 256 317-594 7-270 (279)
200 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-39 3.6E-44 297.7 3.7 251 316-587 10-266 (355)
201 cd06643 STKc_SLK Catalytic dom 100.0 3.9E-37 8.6E-42 310.6 21.3 250 319-588 7-262 (282)
202 cd07876 STKc_JNK2 Catalytic do 100.0 8.1E-37 1.8E-41 319.3 24.1 261 314-588 18-315 (359)
203 cd05624 STKc_MRCK_beta Catalyt 100.0 1.9E-37 4.1E-42 320.3 19.1 255 317-588 1-266 (331)
204 KOG0610 Putative serine/threon 100.0 1.3E-37 2.8E-42 305.8 16.7 246 317-581 77-381 (459)
205 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-37 5.7E-42 319.4 20.0 255 317-588 1-266 (332)
206 cd07873 STKc_PCTAIRE1 Catalyti 100.0 9.1E-38 2E-42 318.4 16.3 261 317-587 6-285 (301)
207 KOG0199 ACK and related non-re 100.0 1.1E-37 2.4E-42 321.8 16.8 253 320-593 113-373 (1039)
208 cd06644 STKc_STK10_LOK Catalyt 100.0 6.6E-37 1.4E-41 310.6 22.3 251 317-587 12-268 (292)
209 cd06631 STKc_YSK4 Catalytic do 100.0 3.1E-37 6.7E-42 308.3 19.6 250 318-587 1-261 (265)
210 cd06609 STKc_MST3_like Catalyt 100.0 3.2E-37 7E-42 309.8 19.7 247 317-587 1-250 (274)
211 cd05603 STKc_SGK2 Catalytic do 100.0 1.7E-37 3.6E-42 319.4 18.1 237 323-583 1-242 (321)
212 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.2E-37 2E-41 305.7 22.9 253 323-590 1-268 (269)
213 cd05615 STKc_cPKC_alpha Cataly 100.0 2.5E-37 5.5E-42 318.3 19.3 241 318-582 1-246 (323)
214 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-37 3.1E-42 311.9 16.9 253 314-587 3-268 (272)
215 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-37 3.2E-42 314.6 17.2 260 318-587 1-284 (288)
216 cd08221 STKc_Nek9 Catalytic do 100.0 4.3E-37 9.4E-42 305.5 20.1 251 318-589 1-254 (256)
217 PTZ00036 glycogen synthase kin 100.0 1.6E-37 3.6E-42 332.1 18.1 259 316-587 65-350 (440)
218 cd06613 STKc_MAP4K3_like Catal 100.0 4.3E-37 9.3E-42 306.4 19.9 253 317-587 3-259 (262)
219 cd06645 STKc_MAP4K3 Catalytic 100.0 2.7E-37 5.9E-42 309.1 18.5 252 317-587 9-264 (267)
220 cd06656 STKc_PAK3 Catalytic do 100.0 2.7E-37 5.8E-42 314.3 18.7 250 316-587 18-268 (297)
221 KOG0577 Serine/threonine prote 100.0 2.7E-38 5.8E-43 320.8 10.8 244 319-588 28-278 (948)
222 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-37 9.1E-42 305.4 19.3 249 317-587 3-252 (256)
223 cd06640 STKc_MST4 Catalytic do 100.0 8.5E-37 1.9E-41 307.4 21.6 248 317-588 4-253 (277)
224 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.6E-37 1.2E-41 306.7 20.1 248 318-587 1-263 (267)
225 KOG4717 Serine/threonine prote 100.0 1.5E-37 3.3E-42 310.8 15.7 248 316-587 17-269 (864)
226 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-37 1E-41 310.7 19.6 253 317-588 1-262 (286)
227 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.6E-37 1.9E-41 303.7 21.2 238 323-590 1-259 (259)
228 cd08223 STKc_Nek4 Catalytic do 100.0 5.6E-37 1.2E-41 304.8 19.8 250 318-588 1-254 (257)
229 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.6E-37 1E-41 308.9 19.3 239 324-590 2-274 (274)
230 cd05044 PTKc_c-ros Catalytic d 100.0 3.5E-37 7.7E-42 308.5 18.5 250 323-591 1-269 (269)
231 KOG4279 Serine/threonine prote 100.0 4.3E-38 9.3E-43 324.0 12.0 244 324-587 582-831 (1226)
232 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-37 2.6E-42 325.7 15.6 251 317-587 1-292 (360)
233 smart00219 TyrKc Tyrosine kina 100.0 5.9E-37 1.3E-41 304.4 19.7 251 319-589 1-258 (258)
234 cd05632 STKc_GRK5 Catalytic do 100.0 4.6E-37 9.9E-42 310.7 19.2 251 319-588 2-261 (285)
235 cd07874 STKc_JNK3 Catalytic do 100.0 3.4E-37 7.5E-42 321.7 18.6 261 314-588 14-311 (355)
236 cd06611 STKc_SLK_like Catalyti 100.0 5.9E-37 1.3E-41 308.9 19.6 252 317-588 5-262 (280)
237 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.1E-37 6.7E-42 310.5 17.4 246 318-587 5-252 (277)
238 cd07868 STKc_CDK8 Catalytic do 100.0 6.7E-37 1.5E-41 314.4 20.2 197 322-524 6-220 (317)
239 PHA03207 serine/threonine kina 100.0 7E-37 1.5E-41 323.3 20.8 261 316-588 91-375 (392)
240 cd05083 PTKc_Chk Catalytic dom 100.0 5E-37 1.1E-41 304.9 18.5 247 317-591 6-253 (254)
241 cd06655 STKc_PAK2 Catalytic do 100.0 3.7E-37 8.1E-42 313.1 17.7 249 317-587 19-268 (296)
242 PHA03209 serine/threonine kina 100.0 6.2E-37 1.3E-41 319.7 19.7 259 316-588 65-351 (357)
243 cd05110 PTKc_HER4 Catalytic do 100.0 5.5E-37 1.2E-41 313.0 18.8 256 317-594 7-270 (303)
244 PHA03211 serine/threonine kina 100.0 1.2E-36 2.6E-41 324.6 22.0 262 315-588 167-455 (461)
245 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-37 6.1E-42 307.5 16.0 240 323-590 1-258 (258)
246 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-36 2.6E-41 313.9 21.2 256 321-587 2-306 (327)
247 cd08528 STKc_Nek10 Catalytic d 100.0 8.5E-37 1.8E-41 305.8 19.5 253 318-590 1-268 (269)
248 cd07875 STKc_JNK1 Catalytic do 100.0 5.7E-37 1.2E-41 321.1 18.8 261 314-588 21-318 (364)
249 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-36 3E-41 303.9 20.7 249 317-587 2-260 (266)
250 cd06632 STKc_MEKK1_plant Catal 100.0 9.7E-37 2.1E-41 303.0 19.3 247 318-587 1-254 (258)
251 cd05042 PTKc_Aatyk Catalytic d 100.0 1.9E-36 4E-41 303.4 21.3 253 323-590 1-268 (269)
252 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.7E-37 1.7E-41 308.9 18.6 255 317-589 5-267 (284)
253 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.3E-36 5E-41 301.9 21.7 256 317-587 1-263 (267)
254 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.8E-37 1.3E-41 318.5 17.7 259 314-588 12-298 (343)
255 cd05586 STKc_Sck1_like Catalyt 100.0 2.8E-37 6.1E-42 319.0 15.2 240 325-587 1-252 (330)
256 cd06638 STKc_myosinIIIA Cataly 100.0 8.2E-37 1.8E-41 308.8 17.8 261 309-588 10-283 (286)
257 cd05074 PTKc_Tyro3 Catalytic d 100.0 2E-36 4.2E-41 303.8 20.2 256 319-593 1-273 (273)
258 cd06636 STKc_MAP4K4_6 Catalyti 100.0 9.6E-37 2.1E-41 307.7 18.0 259 308-587 7-278 (282)
259 cd08218 STKc_Nek1 Catalytic do 100.0 1.4E-36 3E-41 301.9 18.8 250 318-588 1-253 (256)
260 cd06652 STKc_MEKK2 Catalytic d 100.0 2E-36 4.4E-41 302.5 20.1 249 317-587 2-260 (265)
261 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-36 3.5E-41 302.4 19.2 251 318-588 1-262 (265)
262 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-36 5.1E-41 302.2 20.3 252 318-587 1-263 (268)
263 cd07832 STKc_CCRK Catalytic do 100.0 1E-36 2.2E-41 307.9 17.8 262 318-588 1-282 (286)
264 PTZ00284 protein kinase; Provi 100.0 8.2E-37 1.8E-41 330.1 18.2 267 309-587 121-437 (467)
265 cd06658 STKc_PAK5 Catalytic do 100.0 9.6E-37 2.1E-41 309.4 17.4 248 319-588 24-272 (292)
266 cd05574 STKc_phototropin_like 100.0 1.5E-36 3.3E-41 311.6 19.1 252 317-587 1-288 (316)
267 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.9E-36 6.4E-41 302.0 20.7 253 323-590 1-267 (268)
268 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-36 3.2E-41 306.7 18.7 261 317-587 1-282 (286)
269 KOG2052 Activin A type IB rece 100.0 1.4E-36 3E-41 300.5 17.6 269 313-594 207-505 (513)
270 cd08220 STKc_Nek8 Catalytic do 100.0 2.8E-36 6.1E-41 299.5 20.0 249 318-588 1-253 (256)
271 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-36 5.1E-41 306.4 19.7 263 306-587 11-286 (291)
272 cd06626 STKc_MEKK4 Catalytic d 100.0 3E-36 6.4E-41 300.7 20.1 251 318-587 1-260 (264)
273 PTZ00266 NIMA-related protein 100.0 8E-37 1.7E-41 341.1 17.5 256 314-587 10-294 (1021)
274 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.8E-36 6E-41 302.6 19.6 254 318-588 2-269 (272)
275 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.6E-37 2.1E-41 308.2 16.3 261 317-587 1-282 (286)
276 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-36 6.9E-41 309.2 19.8 260 322-587 6-313 (317)
277 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-36 5.5E-41 301.5 18.4 252 317-587 1-256 (265)
278 cd05609 STKc_MAST Catalytic do 100.0 3.5E-36 7.7E-41 307.3 19.8 254 317-590 1-272 (305)
279 cd07836 STKc_Pho85 Catalytic d 100.0 5E-36 1.1E-40 302.6 20.7 262 318-587 1-280 (284)
280 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-36 3.1E-41 306.7 16.6 261 318-587 1-280 (284)
281 cd06647 STKc_PAK_I Catalytic d 100.0 3.1E-36 6.7E-41 305.9 19.1 250 317-588 19-269 (293)
282 cd06659 STKc_PAK6 Catalytic do 100.0 2.2E-36 4.8E-41 307.6 18.0 246 321-588 25-271 (297)
283 cd06608 STKc_myosinIII_like Ca 100.0 2.9E-36 6.3E-41 302.4 18.3 254 315-587 4-271 (275)
284 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-36 3.1E-41 307.2 15.9 262 317-587 1-284 (288)
285 cd06623 PKc_MAPKK_plant_like C 100.0 5.7E-36 1.2E-40 298.6 19.9 252 317-588 1-256 (264)
286 KOG0584 Serine/threonine prote 100.0 9.6E-37 2.1E-41 314.2 14.5 245 320-587 43-295 (632)
287 cd07860 STKc_CDK2_3 Catalytic 100.0 4.4E-36 9.6E-41 303.1 19.1 261 318-587 1-280 (284)
288 KOG0596 Dual specificity; seri 100.0 4.5E-37 9.7E-42 310.9 11.7 252 315-587 359-626 (677)
289 cd06641 STKc_MST3 Catalytic do 100.0 6.8E-36 1.5E-40 300.8 20.4 247 318-588 5-253 (277)
290 KOG0667 Dual-specificity tyros 100.0 2.4E-36 5.2E-41 314.3 17.3 201 317-527 186-395 (586)
291 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.5E-36 1.2E-40 302.2 19.5 251 317-587 1-260 (283)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 4.3E-36 9.3E-41 304.4 18.8 262 317-587 5-287 (291)
293 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.6E-35 3.4E-40 299.8 22.7 260 317-587 1-265 (287)
294 cd05580 STKc_PKA Catalytic dom 100.0 5.5E-36 1.2E-40 303.6 19.3 244 317-587 1-253 (290)
295 cd06648 STKc_PAK_II Catalytic 100.0 7.9E-36 1.7E-40 301.7 20.1 247 319-587 21-268 (285)
296 cd06607 STKc_TAO Catalytic dom 100.0 1.1E-35 2.5E-40 303.8 21.3 246 317-588 15-267 (307)
297 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-35 2.3E-40 300.8 20.4 253 315-588 17-270 (286)
298 cd06917 STKc_NAK1_like Catalyt 100.0 8.4E-36 1.8E-40 300.0 19.3 247 318-587 2-254 (277)
299 cd07841 STKc_CDK7 Catalytic do 100.0 5.8E-36 1.2E-40 304.5 18.1 261 318-588 1-282 (298)
300 cd07843 STKc_CDC2L1 Catalytic 100.0 6.6E-36 1.4E-40 303.4 18.4 261 317-587 5-289 (293)
301 cd05122 PKc_STE Catalytic doma 100.0 1.7E-35 3.7E-40 292.4 20.8 249 318-587 1-250 (253)
302 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-36 7.7E-41 299.4 15.8 247 318-586 1-253 (258)
303 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-35 3.6E-40 300.2 20.7 264 315-587 3-287 (291)
304 KOG0579 Ste20-like serine/thre 100.0 3.8E-37 8.3E-42 314.1 8.5 250 319-588 34-289 (1187)
305 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-35 3.3E-40 303.9 20.2 266 318-587 1-312 (316)
306 cd08225 STKc_Nek5 Catalytic do 100.0 6.1E-36 1.3E-40 297.2 16.6 250 318-588 1-254 (257)
307 PHA03210 serine/threonine kina 100.0 8.5E-36 1.8E-40 323.7 18.9 268 315-588 146-454 (501)
308 cd07840 STKc_CDK9_like Catalyt 100.0 1.3E-35 2.8E-40 299.8 18.9 260 319-587 1-283 (287)
309 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-35 3E-40 301.2 18.8 263 317-587 1-290 (295)
310 cd07831 STKc_MOK Catalytic dom 100.0 1.9E-35 4.1E-40 298.0 19.5 257 319-587 1-278 (282)
311 cd06635 STKc_TAO1 Catalytic do 100.0 3.9E-35 8.4E-40 301.3 21.5 245 319-589 27-278 (317)
312 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-35 4E-40 293.5 18.1 248 318-587 1-252 (256)
313 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-35 3.4E-40 298.9 18.0 260 319-587 1-279 (283)
314 PHA02882 putative serine/threo 100.0 3.7E-35 8E-40 298.1 20.7 259 316-590 11-294 (294)
315 cd08215 STKc_Nek Catalytic dom 100.0 3.2E-35 6.9E-40 291.7 19.5 250 318-587 1-254 (258)
316 cd07849 STKc_ERK1_2_like Catal 100.0 8.9E-36 1.9E-40 308.6 15.7 262 316-588 4-292 (336)
317 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.2E-35 9E-40 292.9 19.9 249 317-587 2-260 (264)
318 cd07850 STKc_JNK Catalytic dom 100.0 3.9E-35 8.5E-40 305.9 20.4 261 314-588 13-311 (353)
319 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-35 2.8E-40 303.7 16.4 263 316-588 6-290 (309)
320 cd06606 STKc_MAPKKK Catalytic 100.0 4.1E-35 8.9E-40 290.8 19.4 250 318-587 1-256 (260)
321 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-35 2.3E-40 308.2 15.8 266 316-593 4-298 (337)
322 cd05572 STKc_cGK_PKG Catalytic 100.0 4.5E-35 9.7E-40 292.2 19.7 242 325-587 1-251 (262)
323 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-35 3.7E-40 301.6 16.4 266 313-587 3-298 (302)
324 cd05633 STKc_GRK3 Catalytic do 100.0 4.4E-35 9.6E-40 295.3 19.2 242 324-588 1-255 (279)
325 cd06657 STKc_PAK4 Catalytic do 100.0 4E-35 8.7E-40 297.5 18.9 243 323-587 26-269 (292)
326 cd06627 STKc_Cdc7_like Catalyt 100.0 6E-35 1.3E-39 289.3 19.7 247 318-587 1-250 (254)
327 cd06616 PKc_MKK4 Catalytic dom 100.0 3.7E-35 8.1E-40 297.1 18.2 254 318-588 5-267 (288)
328 cd05577 STKc_GRK Catalytic dom 100.0 5.1E-35 1.1E-39 294.4 18.9 244 325-587 1-253 (277)
329 cd05118 STKc_CMGC Catalytic do 100.0 2.8E-35 6.1E-40 296.8 17.1 259 319-587 1-279 (283)
330 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-35 6.2E-40 293.4 16.4 245 325-590 1-256 (265)
331 cd07852 STKc_MAPK15 Catalytic 100.0 3.2E-35 6.9E-40 304.6 16.8 266 315-588 5-295 (337)
332 cd07865 STKc_CDK9 Catalytic do 100.0 4.2E-35 9.2E-40 299.7 17.4 262 317-587 12-306 (310)
333 cd07855 STKc_ERK5 Catalytic do 100.0 2.7E-35 5.9E-40 304.7 15.8 265 316-587 4-293 (334)
334 KOG0586 Serine/threonine prote 100.0 2.9E-35 6.2E-40 303.1 15.6 248 315-587 54-305 (596)
335 PLN00009 cyclin-dependent kina 100.0 6E-35 1.3E-39 296.5 17.8 261 317-587 2-283 (294)
336 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-34 2.4E-39 289.0 19.2 243 323-589 2-249 (260)
337 cd05583 STKc_MSK_N N-terminal 100.0 6.7E-35 1.5E-39 295.2 17.9 255 318-591 1-266 (288)
338 cd08216 PK_STRAD Pseudokinase 100.0 2.6E-34 5.6E-39 294.7 22.4 255 322-588 7-295 (314)
339 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-34 4.9E-39 297.1 21.8 255 323-587 4-307 (328)
340 cd07834 STKc_MAPK Catalytic do 100.0 3.1E-35 6.6E-40 303.8 15.2 266 318-593 1-296 (330)
341 cd06634 STKc_TAO2 Catalytic do 100.0 1.4E-34 3.1E-39 295.8 19.9 246 318-589 16-268 (308)
342 PHA03390 pk1 serine/threonine- 100.0 3.3E-34 7.2E-39 287.0 21.8 246 313-587 10-261 (267)
343 cd07838 STKc_CDK4_6_like Catal 100.0 4E-34 8.7E-39 289.0 22.4 259 319-587 1-283 (287)
344 cd06633 STKc_TAO3 Catalytic do 100.0 3.7E-34 8.1E-39 293.4 21.4 244 319-588 23-273 (313)
345 cd05613 STKc_MSK1_N N-terminal 100.0 3.2E-34 7E-39 290.5 20.7 251 318-587 1-267 (290)
346 KOG0200 Fibroblast/platelet-de 100.0 1.6E-34 3.5E-39 318.6 18.8 264 311-592 290-579 (609)
347 KOG0983 Mitogen-activated prot 100.0 4.5E-35 9.7E-40 272.7 12.1 248 321-588 96-349 (391)
348 cd07830 STKc_MAK_like Catalyti 100.0 3.2E-34 6.8E-39 289.3 19.4 262 319-587 1-279 (283)
349 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-34 2.8E-39 291.4 16.1 248 317-587 1-276 (280)
350 cd07866 STKc_BUR1 Catalytic do 100.0 8.8E-35 1.9E-39 297.4 15.1 262 316-587 7-307 (311)
351 KOG1035 eIF-2alpha kinase GCN2 100.0 3.7E-35 8.1E-40 320.7 12.9 254 314-587 476-870 (1351)
352 PTZ00024 cyclin-dependent prot 100.0 1.5E-34 3.2E-39 299.4 16.8 261 317-587 8-312 (335)
353 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-34 2.8E-39 300.6 16.2 262 316-593 14-304 (342)
354 cd05606 STKc_beta_ARK Catalyti 100.0 5.2E-34 1.1E-38 287.3 20.1 242 324-588 1-255 (278)
355 KOG0604 MAP kinase-activated p 100.0 5.2E-35 1.1E-39 275.6 11.6 253 315-587 59-321 (400)
356 KOG0607 MAP kinase-interacting 100.0 1.7E-34 3.7E-39 274.1 15.2 253 323-587 84-360 (463)
357 cd07829 STKc_CDK_like Catalyti 100.0 3.1E-34 6.8E-39 289.0 18.2 259 319-587 1-278 (282)
358 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-34 5.9E-39 298.5 18.0 266 308-588 8-300 (345)
359 cd06618 PKc_MKK7 Catalytic dom 100.0 2.9E-34 6.3E-39 291.9 17.1 252 316-588 14-273 (296)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-34 2.4E-39 301.1 14.3 261 316-587 4-299 (342)
361 cd08222 STKc_Nek11 Catalytic d 100.0 2.9E-34 6.3E-39 285.9 16.7 249 318-587 1-256 (260)
362 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-33 3.4E-38 292.6 22.7 262 312-587 10-297 (343)
363 KOG1024 Receptor-like protein 100.0 1.3E-34 2.8E-39 281.6 13.5 268 311-597 278-560 (563)
364 KOG0690 Serine/threonine prote 100.0 7E-35 1.5E-39 277.2 11.0 241 316-580 167-411 (516)
365 KOG4250 TANK binding protein k 100.0 7.8E-35 1.7E-39 303.7 12.4 268 318-592 14-310 (732)
366 KOG0612 Rho-associated, coiled 100.0 2.7E-35 5.9E-40 319.3 9.3 258 310-587 68-337 (1317)
367 KOG0986 G protein-coupled rece 100.0 7E-35 1.5E-39 288.5 11.3 244 317-582 185-435 (591)
368 KOG0666 Cyclin C-dependent kin 100.0 8E-35 1.7E-39 275.5 11.1 271 314-588 21-337 (438)
369 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.9E-34 8.4E-39 295.2 17.0 262 312-588 5-288 (328)
370 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-35 2.8E-40 325.7 6.2 255 313-588 1231-1494(1509)
371 cd07851 STKc_p38 Catalytic dom 100.0 2.3E-34 4.9E-39 298.9 13.1 259 314-587 12-297 (343)
372 KOG0696 Serine/threonine prote 100.0 1.2E-34 2.7E-39 283.1 10.2 241 317-581 349-594 (683)
373 cd07857 STKc_MPK1 Catalytic do 100.0 9.7E-34 2.1E-38 292.9 17.0 260 318-587 1-291 (332)
374 cd05123 STKc_AGC Catalytic dom 100.0 2.7E-33 5.8E-38 277.0 17.7 236 325-584 1-240 (250)
375 KOG1151 Tousled-like protein k 100.0 3.6E-34 7.7E-39 282.0 9.8 258 315-587 461-740 (775)
376 KOG0662 Cyclin-dependent kinas 100.0 1.2E-33 2.6E-38 247.7 9.5 261 318-587 3-282 (292)
377 cd05610 STKc_MASTL Catalytic d 100.0 1.7E-32 3.6E-37 307.1 19.8 145 317-467 4-152 (669)
378 KOG1006 Mitogen-activated prot 100.0 2E-34 4.4E-39 267.5 3.4 260 304-587 58-326 (361)
379 KOG4236 Serine/threonine prote 100.0 1.9E-33 4E-38 282.2 10.0 244 322-587 569-818 (888)
380 cd05576 STKc_RPK118_like Catal 100.0 1.8E-32 3.9E-37 269.4 15.8 220 328-583 4-224 (237)
381 KOG0603 Ribosomal protein S6 k 100.0 9.5E-33 2.1E-37 286.1 13.7 239 316-587 321-562 (612)
382 PLN03225 Serine/threonine-prot 100.0 6.3E-32 1.4E-36 295.2 19.6 260 315-588 130-450 (566)
383 KOG0669 Cyclin T-dependent kin 100.0 2.7E-34 5.9E-39 264.5 0.6 266 317-588 17-315 (376)
384 smart00220 S_TKc Serine/Threon 100.0 7.1E-32 1.5E-36 264.5 17.7 238 329-587 1-240 (244)
385 KOG0587 Traf2- and Nck-interac 100.0 3.9E-32 8.5E-37 288.7 16.7 254 314-587 16-281 (953)
386 PLN03224 probable serine/threo 100.0 9.6E-32 2.1E-36 286.6 18.5 262 316-588 144-500 (507)
387 KOG0671 LAMMER dual specificit 100.0 1.5E-32 3.2E-37 267.8 10.0 261 316-588 88-406 (415)
388 KOG0695 Serine/threonine prote 100.0 3.2E-32 7E-37 259.8 11.5 248 316-580 249-502 (593)
389 KOG0608 Warts/lats-like serine 100.0 7.3E-31 1.6E-35 268.6 15.5 206 317-528 629-879 (1034)
390 KOG0668 Casein kinase II, alph 100.0 3E-31 6.4E-36 241.3 11.0 256 316-587 37-321 (338)
391 KOG1027 Serine/threonine prote 100.0 1.1E-31 2.4E-36 284.0 8.0 245 319-587 511-766 (903)
392 KOG0614 cGMP-dependent protein 100.0 9.2E-32 2E-36 269.3 5.2 242 317-581 420-665 (732)
393 KOG0664 Nemo-like MAPK-related 100.0 1.2E-31 2.6E-36 249.6 2.9 263 320-589 56-344 (449)
394 KOG0984 Mitogen-activated prot 100.0 2.1E-30 4.5E-35 232.5 9.0 207 312-523 41-255 (282)
395 cd00180 PKc Catalytic domain o 100.0 1.7E-28 3.7E-33 234.5 20.2 211 325-589 1-215 (215)
396 KOG1152 Signal transduction se 100.0 2.1E-29 4.5E-34 256.2 8.6 196 318-522 562-771 (772)
397 KOG0576 Mitogen-activated prot 100.0 5.4E-30 1.2E-34 264.6 3.6 253 316-587 14-270 (829)
398 KOG1290 Serine/threonine prote 100.0 1.7E-27 3.6E-32 238.5 19.1 131 317-452 78-221 (590)
399 KOG0670 U4/U6-associated splic 100.0 5.4E-29 1.2E-33 250.2 8.4 269 312-588 427-746 (752)
400 KOG0665 Jun-N-terminal kinase 100.0 7.2E-29 1.6E-33 236.7 8.4 260 316-587 16-309 (369)
401 smart00221 STYKc Protein kinas 100.0 1.9E-27 4.2E-32 230.6 18.0 199 319-522 1-202 (225)
402 KOG1167 Serine/threonine prote 99.9 2.6E-27 5.7E-32 234.3 10.3 265 312-588 31-381 (418)
403 KOG1345 Serine/threonine kinas 99.9 5.3E-27 1.1E-31 218.8 9.3 252 315-587 22-283 (378)
404 PLN00181 protein SPA1-RELATED; 99.9 1E-26 2.2E-31 266.7 9.7 195 369-587 28-264 (793)
405 PF13947 GUB_WAK_bind: Wall-as 99.9 3E-26 6.5E-31 194.5 9.2 100 1-103 2-106 (106)
406 smart00750 KIND kinase non-cat 99.9 1.9E-25 4.2E-30 208.7 14.2 169 398-594 1-171 (176)
407 KOG1165 Casein kinase (serine/ 99.9 1.3E-24 2.8E-29 208.3 16.9 265 316-597 27-304 (449)
408 KOG1164 Casein kinase (serine/ 99.9 8.3E-24 1.8E-28 217.1 18.9 261 318-595 19-300 (322)
409 KOG1163 Casein kinase (serine/ 99.9 2.4E-24 5.3E-29 197.9 12.6 264 315-595 13-287 (341)
410 PRK09188 serine/threonine prot 99.9 7E-24 1.5E-28 217.2 15.3 169 309-494 10-194 (365)
411 KOG0195 Integrin-linked kinase 99.9 1.6E-23 3.4E-28 195.5 4.7 250 320-593 193-447 (448)
412 COG0515 SPS1 Serine/threonine 99.9 2.5E-21 5.3E-26 197.9 21.2 261 319-588 2-275 (384)
413 KOG0590 Checkpoint kinase and 99.9 6.5E-23 1.4E-27 223.7 6.6 253 320-587 321-584 (601)
414 KOG1240 Protein kinase contain 99.9 3.1E-22 6.7E-27 217.7 6.6 248 318-591 24-294 (1431)
415 PRK10359 lipopolysaccharide co 99.9 1.4E-21 3E-26 186.4 10.3 172 314-514 28-216 (232)
416 cd05147 RIO1_euk RIO kinase fa 99.8 8.1E-21 1.8E-25 179.0 12.1 139 322-469 2-167 (190)
417 KOG1023 Natriuretic peptide re 99.8 2.2E-20 4.7E-25 194.8 13.2 217 367-594 1-226 (484)
418 cd05145 RIO1_like RIO kinase f 99.8 1.4E-19 3E-24 171.2 14.8 139 322-470 2-168 (190)
419 PF14531 Kinase-like: Kinase-l 99.8 6.3E-20 1.4E-24 180.2 12.8 233 318-579 13-288 (288)
420 KOG1166 Mitotic checkpoint ser 99.8 1.1E-19 2.3E-24 202.1 13.3 204 306-518 687-901 (974)
421 PRK12274 serine/threonine prot 99.8 2.5E-19 5.3E-24 167.3 13.1 188 320-525 5-212 (218)
422 KOG0603 Ribosomal protein S6 k 99.8 8.5E-21 1.8E-25 197.5 3.7 225 324-582 1-232 (612)
423 PRK10345 hypothetical protein; 99.8 1.2E-18 2.7E-23 165.7 14.0 136 320-466 5-156 (210)
424 PRK14879 serine/threonine prot 99.8 1.1E-17 2.4E-22 161.1 15.8 134 323-468 2-143 (211)
425 KOG1033 eIF-2alpha kinase PEK/ 99.7 8E-19 1.7E-23 179.5 3.5 242 319-585 246-509 (516)
426 KOG4158 BRPK/PTEN-induced prot 99.7 9.6E-18 2.1E-22 164.8 10.7 196 371-589 274-511 (598)
427 smart00090 RIO RIO-like kinase 99.7 3.9E-17 8.4E-22 159.3 13.1 143 317-469 28-198 (237)
428 cd05144 RIO2_C RIO kinase fami 99.7 8.6E-17 1.9E-21 153.3 13.8 143 312-470 10-176 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 1.3E-16 2.9E-21 152.1 13.1 130 324-468 1-138 (199)
430 PRK09605 bifunctional UGMP fam 99.7 1.5E-16 3.3E-21 174.4 14.4 137 316-468 332-476 (535)
431 KOG0606 Microtubule-associated 99.7 1.8E-17 3.9E-22 181.0 5.4 209 316-581 82-305 (1205)
432 cd05119 RIO RIO kinase family, 99.6 3.9E-15 8.5E-20 140.5 12.0 136 322-470 2-165 (187)
433 cd05120 APH_ChoK_like Aminogly 99.6 6.6E-15 1.4E-19 133.1 13.1 135 321-468 2-138 (155)
434 KOG0590 Checkpoint kinase and 99.6 6.6E-17 1.4E-21 176.7 -0.4 254 316-586 19-284 (601)
435 PRK01723 3-deoxy-D-manno-octul 99.6 1.8E-14 4E-19 140.8 14.0 135 323-469 37-192 (239)
436 TIGR01982 UbiB 2-polyprenylphe 99.4 7.5E-13 1.6E-17 140.6 13.0 141 322-470 122-308 (437)
437 KOG1266 Protein kinase [Signal 99.4 1.6E-13 3.6E-18 132.4 6.5 202 365-588 119-331 (458)
438 KOG0601 Cyclin-dependent kinas 99.4 3.7E-13 8.1E-18 140.9 7.1 247 318-587 115-378 (524)
439 KOG1243 Protein kinase [Genera 99.4 1E-11 2.2E-16 131.3 16.1 165 339-516 35-199 (690)
440 PF08488 WAK: Wall-associated 99.3 4E-12 8.6E-17 105.5 8.5 97 130-237 2-102 (103)
441 cd05151 ChoK Choline Kinase (C 99.3 1.2E-11 2.5E-16 114.7 10.4 129 323-467 4-135 (170)
442 PRK04750 ubiB putative ubiquin 99.3 3.4E-11 7.3E-16 129.5 12.8 144 317-471 120-316 (537)
443 cd05146 RIO3_euk RIO kinase fa 99.2 1.4E-10 3.1E-15 108.5 14.6 136 322-469 2-174 (197)
444 COG3642 Mn2+-dependent serine/ 99.2 2.4E-10 5.1E-15 103.3 11.5 131 323-468 2-140 (204)
445 KOG3087 Serine/threonine prote 99.2 6.2E-10 1.3E-14 100.0 13.2 143 321-468 11-165 (229)
446 KOG3741 Poly(A) ribonuclease s 99.2 7.1E-10 1.5E-14 113.9 15.4 169 329-518 288-474 (655)
447 cd05154 ACAD10_11_like Acyl-Co 99.1 4E-10 8.7E-15 109.1 12.6 142 323-468 4-206 (223)
448 KOG0601 Cyclin-dependent kinas 99.1 2.9E-11 6.3E-16 126.8 4.5 261 304-594 251-520 (524)
449 KOG0606 Microtubule-associated 99.0 5.8E-11 1.2E-15 130.8 0.9 250 314-583 801-1084(1205)
450 COG4248 Uncharacterized protei 99.0 4.1E-09 8.9E-14 105.8 12.7 266 320-596 14-304 (637)
451 PF01163 RIO1: RIO1 family; I 99.0 4.5E-09 9.7E-14 98.1 11.8 126 332-470 1-157 (188)
452 PRK15123 lipopolysaccharide co 98.9 5.1E-08 1.1E-12 96.5 15.7 134 330-468 35-194 (268)
453 COG0478 RIO-like serine/threon 98.8 8.9E-08 1.9E-12 91.9 12.2 135 319-468 93-251 (304)
454 KOG2137 Protein kinase [Signal 98.7 5.1E-09 1.1E-13 111.6 2.0 151 422-587 105-264 (700)
455 PF06293 Kdo: Lipopolysacchari 98.6 4E-07 8.6E-12 87.1 12.1 108 356-469 54-171 (206)
456 PRK09902 hypothetical protein; 98.5 3.9E-06 8.4E-11 79.0 14.2 139 325-468 26-179 (216)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.5E-06 5.3E-11 82.8 13.4 132 323-467 7-181 (226)
458 COG0661 AarF Predicted unusual 98.4 1.5E-06 3.2E-11 93.3 11.9 185 323-515 131-387 (517)
459 PF06176 WaaY: Lipopolysacchar 98.4 4.1E-06 8.9E-11 79.1 11.3 138 315-468 29-183 (229)
460 cd05150 APH Aminoglycoside 3'- 98.2 1.4E-05 3.1E-10 78.6 13.1 139 325-467 6-192 (244)
461 COG1718 RIO1 Serine/threonine 98.2 1.6E-05 3.4E-10 76.0 11.9 150 309-469 37-216 (268)
462 KOG0576 Mitogen-activated prot 98.2 2.2E-07 4.7E-12 98.3 -1.0 186 318-520 243-430 (829)
463 PF01636 APH: Phosphotransfera 98.2 8.7E-06 1.9E-10 79.2 10.0 142 323-467 3-196 (239)
464 PF12260 PIP49_C: Protein-kina 98.1 1E-05 2.3E-10 75.8 9.2 104 361-468 7-111 (188)
465 PLN02876 acyl-CoA dehydrogenas 98.1 4.8E-05 1E-09 88.0 14.2 79 322-400 43-131 (822)
466 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00012 2.5E-09 69.1 13.9 128 322-462 6-165 (199)
467 KOG1235 Predicted unusual prot 98.0 4.1E-05 8.8E-10 82.1 11.8 140 323-471 167-357 (538)
468 COG2112 Predicted Ser/Thr prot 97.8 0.00013 2.8E-09 66.0 9.9 128 320-467 25-154 (201)
469 PRK10593 hypothetical protein; 97.8 0.00032 6.8E-09 71.1 13.9 76 322-400 19-100 (297)
470 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00015 3.2E-09 70.9 11.2 73 323-401 3-82 (235)
471 TIGR02721 ycfN_thiK thiamine k 97.7 0.0002 4.3E-09 71.0 10.7 138 324-467 3-174 (256)
472 cd05157 ETNK_euk Ethanolamine 97.7 0.00034 7.4E-09 68.3 12.0 74 323-401 4-80 (235)
473 PRK09550 mtnK methylthioribose 97.7 0.00051 1.1E-08 71.8 13.3 75 323-399 32-117 (401)
474 PF13095 FTA2: Kinetochore Sim 97.6 0.0008 1.7E-08 63.0 11.2 125 317-466 37-206 (207)
475 KOG1035 eIF-2alpha kinase GCN2 97.5 0.00039 8.5E-09 79.1 9.4 197 358-588 227-434 (1351)
476 PRK05231 homoserine kinase; Pr 97.4 0.0043 9.3E-08 63.6 15.3 156 308-467 8-216 (319)
477 TIGR00938 thrB_alt homoserine 97.3 0.0023 5E-08 65.2 12.6 156 309-467 9-216 (307)
478 cd05153 HomoserineK_II Homoser 97.3 0.0045 9.8E-08 62.7 14.5 142 322-467 19-204 (296)
479 cd05156 ChoK_euk Choline Kinas 97.3 0.0016 3.4E-08 66.3 10.4 139 324-467 5-212 (302)
480 PF03881 Fructosamin_kin: Fruc 97.0 0.004 8.7E-08 62.4 10.2 73 322-398 22-97 (288)
481 cd05152 MPH2' Macrolide 2'-Pho 97.0 0.0075 1.6E-07 60.4 11.9 31 438-468 185-216 (276)
482 COG3173 Predicted aminoglycosi 96.9 0.01 2.2E-07 60.0 11.9 128 333-469 41-229 (321)
483 PLN02236 choline kinase 96.9 0.0086 1.9E-07 62.0 11.6 139 324-467 43-230 (344)
484 KOG2268 Serine/threonine prote 96.8 0.0019 4.2E-08 64.1 5.6 134 318-467 93-250 (465)
485 TIGR01767 MTRK 5-methylthiorib 96.8 0.014 3E-07 59.9 11.7 79 324-404 2-92 (370)
486 PLN02756 S-methyl-5-thioribose 96.8 0.019 4.2E-07 60.0 12.7 80 322-404 37-128 (418)
487 PRK12396 5-methylribose kinase 96.6 0.023 4.9E-07 59.1 12.2 81 322-404 34-125 (409)
488 KOG1826 Ras GTPase activating 96.6 0.00014 3.1E-09 84.2 -4.2 161 359-520 1275-1440(2724)
489 KOG2270 Serine/threonine prote 96.4 0.029 6.2E-07 56.9 10.7 142 320-469 147-314 (520)
490 KOG1093 Predicted protein kina 96.1 0.0075 1.6E-07 63.4 5.0 50 357-407 26-76 (725)
491 TIGR02906 spore_CotS spore coa 96.0 0.16 3.5E-06 51.7 14.6 28 439-467 188-215 (313)
492 PF01633 Choline_kinase: Choli 96.0 0.013 2.8E-07 56.2 5.8 30 439-468 144-174 (211)
493 TIGR02904 spore_ysxE spore coa 95.8 0.12 2.7E-06 52.6 12.5 30 439-468 197-226 (309)
494 PLN02421 phosphotransferase, a 95.7 0.083 1.8E-06 54.4 11.0 139 324-467 21-212 (330)
495 PF07387 Seadorna_VP7: Seadorn 95.6 0.044 9.6E-07 51.7 7.4 149 329-515 74-223 (308)
496 COG5072 ALK1 Serine/threonine 95.6 0.035 7.6E-07 56.2 7.1 74 385-469 298-371 (488)
497 COG2334 Putative homoserine ki 95.0 0.6 1.3E-05 47.8 14.3 140 324-467 33-227 (331)
498 PF14380 WAK_assoc: Wall-assoc 95.0 0.036 7.8E-07 45.5 4.4 69 161-239 23-93 (94)
499 COG3001 Uncharacterized protei 94.9 0.36 7.8E-06 46.1 11.3 73 325-401 24-99 (286)
500 PRK11768 serine/threonine prot 94.7 0.64 1.4E-05 47.7 13.8 94 306-400 10-114 (325)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-54 Score=446.11 Aligned_cols=289 Identities=46% Similarity=0.752 Sum_probs=257.7
Q ss_pred cccccCHHHHHHHhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEE
Q 038707 303 KTKLFTSKDLEKATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCC 382 (597)
Q Consensus 303 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 382 (597)
..+.|+..++..+|++|...++||+|+||.||+|.+.+++.||||++.........+|.+|+.++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56789999999999999999999999999999999999999999987764443145599999999999999999999999
Q ss_pred EeCCc-ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEe
Q 038707 383 LETEV-PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVS 461 (597)
Q Consensus 383 ~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~ 461 (597)
.+.+. .+||||||++|+|.++|+..... +++|..+++||.++|+||+|||....++|+||||||+|||||+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99994 99999999999999999986544 79999999999999999999999998899999999999999999999999
Q ss_pred eccccccccC-CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 462 DFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 462 Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
|||+++..+. ........ .||.+|+|||++..+..+.|+|||||||+|+||++|++|.+.........+..|+...+.
T Consensus 220 DFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred CccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999976654 22222211 799999999999999999999999999999999999999887666666779999999999
Q ss_pred cCchhhhhhHHhh-hhhhH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 541 ENRLFEALDARVL-KEAKK-EEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 541 ~~~~~~~l~~~~~-~~~~~-~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
++.+.+++|+.+. ..... .....+..++.+|++.+|.+||+|.||+++|+.+.
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9999999999987 44333 67888999999999999999999999999997765
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-47 Score=370.74 Aligned_cols=247 Identities=30% Similarity=0.426 Sum_probs=210.2
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc-ceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEV-PLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~ 395 (597)
.+..+.||+|..|+|||+.++ +++.+|+|.+.. .++...+++.+|+++++..+||+||+++|.|..... ..|+||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 444678999999999999987 689999999854 456677899999999999999999999999999995 99999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++|+|++++.+.. .+++..+.+++.+|++||.|||+ ++ |+||||||+|||++..|.+||+|||.+..+...
T Consensus 161 DgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred CCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 9999999998753 39999999999999999999996 66 999999999999999999999999999887544
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh-
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL- 553 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 553 (597)
......||..|||||.+.+..|+.++||||||++++|+.+|+.||....... . .++++++....
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-~-------------~~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-L-------------DIFELLCAIVDE 297 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC-C-------------CHHHHHHHHhcC
Confidence 4566789999999999999999999999999999999999999997641111 1 12222222221
Q ss_pred --hhhhH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 --KEAKK-EEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 --~~~~~-~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+. ..++++..+|..||++||.+||+++|++++
T Consensus 298 ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 298 PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11223 477889999999999999999999999863
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-47 Score=388.17 Aligned_cols=259 Identities=35% Similarity=0.563 Sum_probs=214.3
Q ss_pred CccCCcccccCceEEEEEEecCCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-cceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETE-VPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 395 (597)
....+.||+|+||+||+|.+.....||||++.... ....++|.+|+.+|++++|||||+++|++.+.. ...|||||+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 34445699999999999999765669999987533 223679999999999999999999999999988 789999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccccccCCCc
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~~~~~~~~ 474 (597)
++|+|.++++.. ....+++..+++++.+||+||.|||+.+. ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 999999999885 34569999999999999999999999984 99999999999999997 99999999998754322
Q ss_pred eeeecccccccccCccccc--cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 475 HLTTKVQGTFGYVDPEYFQ--SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~--~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
...+...||+.|||||++. ...|+.|+||||||++||||+||+.||....... ........+.
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~------~~~~v~~~~~--------- 263 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ------VASAVVVGGL--------- 263 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCC---------
Confidence 2233467999999999999 5699999999999999999999999998655311 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhhc
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTSI 596 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~~ 596 (597)
....+...++.+..|+.+||..||..||++.+++..|+.+...+
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 11223336777999999999999999999999999999987653
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-47 Score=390.85 Aligned_cols=247 Identities=27% Similarity=0.433 Sum_probs=215.9
Q ss_pred cCCccCCcccccCceEEEEEEe-cCCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
..|...++||+|||+.+|+++. ..|+.||+|.+.. ......+.+.+||++.++|+|||||+++++|++.+..|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999997 6899999998653 45667889999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
|++++++|.+++++ ++++++.+++.+++||+.||.|||+++ |+|||||..|+||+++.++||+|||||..+..+
T Consensus 98 ELC~~~sL~el~Kr---rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR---RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 99999999999984 346999999999999999999999999 999999999999999999999999999987644
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. ......+|||.|+|||++.....+..+||||+|||||.||.|++||+..+..+ ....++.+..
T Consensus 172 ~-Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-------ty~~Ik~~~Y-------- 235 (592)
T KOG0575|consen 172 G-ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-------TYNKIKLNEY-------- 235 (592)
T ss_pred c-cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-------HHHHHHhcCc--------
Confidence 3 34556789999999999999999999999999999999999999997544332 3333333322
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...+.+..+||.++|+.||.+|||+++|+.
T Consensus 236 --~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 --SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 113355667889999999999999999999986
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=388.29 Aligned_cols=256 Identities=31% Similarity=0.480 Sum_probs=223.5
Q ss_pred CccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 319 YNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.+.+.||+|-||+||.|.++....||+|.++.. ....+.|.+|+++|++|+|+|||++++++..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3445689999999999999988889999988754 334578899999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeee
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT 478 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~ 478 (597)
+|.+||+.. .+..+...+.+.++.|||+|++||++++ +|||||.++||||+++..+||+||||++....+......
T Consensus 287 sLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~ 362 (468)
T KOG0197|consen 287 SLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE 362 (468)
T ss_pred cHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence 999999973 3445999999999999999999999999 999999999999999999999999999965555555566
Q ss_pred cccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 479 KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 479 ~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
...-...|+|||.+..+.++.|||||||||+||||+| |+.|+..+...+ ..+.++.......+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------------v~~~le~GyRlp~P 426 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------------VLELLERGYRLPRP 426 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----------------HHHHHhccCcCCCC
Confidence 6667789999999999999999999999999999999 999987765444 23334444445556
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
..++.++.+|+..||+.+|++|||++.+.+.|+.+...
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 77889999999999999999999999999999988753
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-46 Score=368.25 Aligned_cols=204 Identities=32% Similarity=0.524 Sum_probs=184.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
..+|.+.+.||+|+|++||+|+++ ++..||||.+... ..+..+.+..|+.+|+.++|||||+|+++++..+..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457889999999999999999976 5899999987654 6777888999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC------CcEEEeecccc
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK------YRAKVSDFGTS 466 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~------~~~kl~Dfgl~ 466 (597)
|||.+|+|.+||+++. .+++..+..++.|||.||++||+++ |+||||||+||||+.. -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999764 3999999999999999999999999 9999999999999764 46899999999
Q ss_pred ccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE 527 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~ 527 (597)
+.+. ........+|++-|||||+++..+|+.|+|+||+|++||++++|+.||+..+..|
T Consensus 163 R~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e 221 (429)
T KOG0595|consen 163 RFLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE 221 (429)
T ss_pred hhCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence 9875 3344667889999999999999999999999999999999999999998655443
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-46 Score=363.74 Aligned_cols=253 Identities=28% Similarity=0.380 Sum_probs=209.2
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-------hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-------ETNVEQFINEVVILSQINHRNIVKLLGCCLETE 386 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 386 (597)
..+.|.+.+.||+|+||.|-+|..+ +|+.||||++.... ........+|+++|++|+|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4567889999999999999999965 79999999865421 112234579999999999999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC---CcEEEeec
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK---YRAKVSDF 463 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~---~~~kl~Df 463 (597)
..|+||||++||.|.+++-.+.. +.+..-..++.|++.|+.|||+.| |+||||||+|||+..+ -.+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999999987543 788888999999999999999999 9999999999999765 78999999
Q ss_pred cccccccCCCceeeecccccccccCccccccCC---CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 464 GTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQ---FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 464 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
|+|+... ....+...+|||.|.|||++.+.. +..+.|+||+||+||-+|+|.+||.....+. + ..+.+.
T Consensus 324 GlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--s----l~eQI~ 395 (475)
T KOG0615|consen 324 GLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--S----LKEQIL 395 (475)
T ss_pred chhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--c----HHHHHh
Confidence 9998764 556788899999999999997654 3458899999999999999999997544332 1 233344
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+++... .....+.+++..+||.+||..||++|||+.|+|+
T Consensus 396 ~G~y~f~------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 KGRYAFG------PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCccccc------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 4443211 1123566778899999999999999999999886
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-47 Score=353.12 Aligned_cols=257 Identities=28% Similarity=0.416 Sum_probs=211.1
Q ss_pred cCCccCCcccccCceEEEEEEe-cCCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeee-EEEeCC-cceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLG-CCLETE-VPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~-~~~lv 391 (597)
.+|++.+.||+|.||+||++.. .+|..+|.|.++. .+....+....|+.+|++|+|||||++++ .+.++. .++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4588889999999999999995 5899999998763 56677888999999999999999999998 455544 48999
Q ss_pred EeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 392 YEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAA-SIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
||++..|+|...++..+ .+..++++.+|+++.|++.||..+|+.- +..|+||||||.||+|+.+|.+||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999998643 3345999999999999999999999921 113999999999999999999999999999987
Q ss_pred cCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
.... .......|||.||+||.+.+..|+.||||||+||++|||..-++||.+.+..+ ....+..+....+.
T Consensus 179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~-------L~~KI~qgd~~~~p- 249 (375)
T KOG0591|consen 179 SSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS-------LCKKIEQGDYPPLP- 249 (375)
T ss_pred cchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH-------HHHHHHcCCCCCCc-
Confidence 5433 34556789999999999999999999999999999999999999998753211 33444444332221
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
....+..+.+||..|+..||+.||+...++..+
T Consensus 250 -------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 250 -------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred -------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 255677899999999999999999954444443
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5e-45 Score=388.56 Aligned_cols=260 Identities=30% Similarity=0.494 Sum_probs=226.5
Q ss_pred hcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 388 (597)
..+.+..+.||+|+||+||+|... +...||||.++..... ..++|.+|++++..++|||||+|+|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 345666789999999999999853 2467999999976665 788999999999999999999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIE-----------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
++|+|||..|+|.+||..... ..+|+..+.+.||.|||.|+.||-++. ++||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 999999999999999986321 234899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCCCceeee-cccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHH
Q 038707 458 AKVSDFGTSRSVMVDQTHLTT-KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 458 ~kl~Dfgl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~ 535 (597)
|||+||||++.....+.+... ...-..+|||||.+..+++|.+||||||||+|||+++ |+.|+.+...+| +
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------V 714 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------V 714 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------H
Confidence 999999999987765554433 4445779999999999999999999999999999999 999998877666 5
Q ss_pred HHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 536 LQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+.++.+++ -..+..++.++.+|+..||+.+|.+||+++||-..|+.+-.
T Consensus 715 Ie~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 715 IECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 556666655 23467788899999999999999999999999999987653
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=352.24 Aligned_cols=243 Identities=29% Similarity=0.407 Sum_probs=206.4
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
.+.|++.++||+|+||+||.++.+ +++.+|+|.++. ....+.+..+.|..+|.+++||.||+++-.|++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999965 589999997664 4445678899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
+||+.||.|..+|.+.. .++++.+.-++.+|+.||.|||+++ |+||||||+|||||++|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998654 3899999999999999999999999 99999999999999999999999999986544
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.. ......+||+.|||||++.+..|+..+|.||||+++|||++|.+||...+..+ ....+..++
T Consensus 178 ~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~-------~~~~I~~~k-------- 241 (357)
T KOG0598|consen 178 DG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK-------MYDKILKGK-------- 241 (357)
T ss_pred CC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH-------HHHHHhcCc--------
Confidence 32 23445789999999999999999999999999999999999999997644322 122222222
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCC
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPT 581 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt 581 (597)
....+.-.+.+..+|+.+.|+.||++|..
T Consensus 242 -~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 242 -LPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred -CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 12223335567889999999999999963
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=350.67 Aligned_cols=255 Identities=31% Similarity=0.467 Sum_probs=207.8
Q ss_pred hcCCccCCcccccCceEEEEEEecC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC--cceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETE--VPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 392 (597)
..++...+.||+|+||.||++...+ |+..|||.+...+....+.+.+|+.+|++++|||||+.+|.....+ ...+.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3457788999999999999999764 9999999987654444778999999999999999999999855554 688999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~~~~~ 471 (597)
||+++|+|.+++.+... .+++..+..+++||++||.|||+++ |+|+||||+|||++. ++.+||+|||++.....
T Consensus 96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999998653 5999999999999999999999999 999999999999999 79999999999987653
Q ss_pred --CCceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 472 --DQTHLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 472 --~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
..........||+.|||||++..+ ....++|||||||++.||+||+.||... ..............
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~------ 239 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRED------ 239 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccC------
Confidence 222234457799999999999853 3345999999999999999999999753 11111111111111
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
.....+...+.+..+++.+|++.+|++|||++++|+..
T Consensus 240 ---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 240 ---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11133445667789999999999999999999999864
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=343.23 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=212.2
Q ss_pred hcCCccCCcccccCceEEEEEEe-cCCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.+.|++.+.||.|.-++||+|.. ..++.||||++.+.... +.+.+.+|+..|+.++||||++++..|..++.+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46799999999999999999995 46899999998864433 36889999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
||.+|++.++++.....+ +++..+..|++++++||.|||.+| .||||||+.||||+++|.|||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999999865544 999999999999999999999999 9999999999999999999999999987765433
Q ss_pred cee---eecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 474 THL---TTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 474 ~~~---~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
... .....||+.|||||++.. ..|+.|+||||||++..||.+|..||....+-. .....+....- -.+
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk------vLl~tLqn~pp-~~~ 253 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK------VLLLTLQNDPP-TLL 253 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH------HHHHHhcCCCC-Ccc
Confidence 221 145679999999999543 579999999999999999999999998655432 11111111111 000
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......+........+.++|..||+.||.+|||++++++
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 001111122333447899999999999999999999986
No 13
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=358.86 Aligned_cols=250 Identities=27% Similarity=0.435 Sum_probs=215.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
..|...+.||+|+-|.||.+... +++.||||++........+-+++|+.+|+..+|+|||.+++.+...+.+|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 45777789999999999999954 68899999999888888889999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++|+|.|.+.... +++.++..|.+++++||+|||.++ |+|||||.+|||++.++.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred CCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 9999999997653 999999999999999999999999 99999999999999999999999999988765444
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......||+.|||||++....|++|.||||||+|++||+-|.+||-..++ +. +...+..+.-.++ .
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-----lr--AlyLIa~ng~P~l-------k 490 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LR--ALYLIATNGTPKL-------K 490 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-----HH--HHHHHhhcCCCCc-------C
Confidence 45566799999999999999999999999999999999999999975221 11 2222222221111 1
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+..|.+|+.+||+.|+++|++++|+|+.
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 235566779999999999999999999999873
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-43 Score=352.85 Aligned_cols=266 Identities=26% Similarity=0.345 Sum_probs=211.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 390 (597)
.+.|+..++||+|.||.||+|++. +|+.||+|++.... +....-..+||.||++|+||||++|.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 345777789999999999999964 79999999987654 44456678999999999999999999999887 68999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|+|||++ +|.-++... ...+++.++.-+++||+.||+|+|+.+ |+|||||.+|||||.+|.+||+|||||+.+.
T Consensus 196 VFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999976 888888753 334999999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch-----
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL----- 544 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 544 (597)
.......+..+-|+.|.|||++.+ ..|+.+.|+||.||||.||+.|++.|++.++-++-..+-.......+.-+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 666666777788999999999877 57999999999999999999999999886654432222111000001001
Q ss_pred --hhhhh-----HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 --FEALD-----ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 --~~~l~-----~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+. ++...+.....+....+|+..+|..||.+|.|+.++|+
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 01110 11112223344566789999999999999999999875
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.9e-43 Score=331.86 Aligned_cols=264 Identities=23% Similarity=0.363 Sum_probs=210.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|+.+.++|+|+||+||+.+++ +|+.||||++....+ .-.+-.++||++|++++|||+|.|+++|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45788889999999999999987 599999999775433 334567899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|++. ++.+-|.+...+ ++.+.+.+++.|+++|+.|+|+++ ++||||||+||||+.++.+||+|||+|+.+.. .
T Consensus 82 ~~dh-TvL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNG--VPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA-P 154 (396)
T ss_pred ecch-HHHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC-C
Confidence 9976 555556665544 889999999999999999999999 99999999999999999999999999998764 3
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH--------HHHHHHHhcCch
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV--------GYFLQAINENRL 544 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~ 544 (597)
....+.+..|..|.|||++.+ .+|+...|||++||++.||++|.+.|.+...-+.--++ -...+....+..
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 445667788999999999887 78999999999999999999999988765432211111 111222223332
Q ss_pred hhhh------hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 FEAL------DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ~~~l------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.-+ +++.++..-.....-+.+|+++||+.||.+|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 2111 122222223444557899999999999999999999874
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.6e-42 Score=355.33 Aligned_cols=261 Identities=28% Similarity=0.468 Sum_probs=208.1
Q ss_pred hcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCC-
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQI-NHRNIVKLLGCCLETE- 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 386 (597)
.++|++.++||+|+||.||+|.+. +++.||||+++... ......+.+|+.++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 467999999999999999999742 35689999886432 34456799999999999 8999999999887644
Q ss_pred cceEEEeccCCCChhhHHhhcCC---------------------------------------------------------
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIE--------------------------------------------------------- 409 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 409 (597)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999999975321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce-eeecccccccc
Q 038707 410 --EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGY 486 (597)
Q Consensus 410 --~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y 486 (597)
..++++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++........ ......+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 124788999999999999999999999 999999999999999999999999999865432221 12223456789
Q ss_pred cCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHH
Q 038707 487 VDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVA 565 (597)
Q Consensus 487 ~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 565 (597)
+|||++.+..++.++||||||++||||++ |..||......+ .+...+..+... ..+...++.+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQRLKDGTRM---------RAPENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHHHhcCCCC---------CCCCCCCHHHH
Confidence 99999998999999999999999999997 999997643322 112222222111 11223455688
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 566 TLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 566 ~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
+|+.+||+.||++|||+.|++++|+++..
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998865
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-43 Score=350.55 Aligned_cols=263 Identities=25% Similarity=0.359 Sum_probs=210.1
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhH-HHHHHHHHHHhhcC-CCccceeeeEEEeCC-cceE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNV-EQFINEVVILSQIN-HRNIVKLLGCCLETE-VPLL 390 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 390 (597)
..++|.+.++||.|.||.||+|+.. +++.||||+++..-.... -.=++|++.|++|+ |||||+|.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4567999999999999999999965 689999999875333322 22358999999999 999999999999988 9999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|||||+ .+|.++++++ +.++++..+..|+.||++||+|+|.+| ++|||+||+|||+..+..+||+|||+|+...
T Consensus 88 VfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence 999995 5999999986 557999999999999999999999999 9999999999999999899999999999875
Q ss_pred CCCceeeecccccccccCcccc-ccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC---ch--
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYF-QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN---RL-- 544 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~-- 544 (597)
. ....+.+..|..|.|||++ ....|+.+.|+|++|||++|+.+-++.|.+.++-++... +.+.+... .+
T Consensus 162 S--kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K---Ic~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 162 S--KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK---ICEVLGTPDKDSWPE 236 (538)
T ss_pred c--CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH---HHHHhCCCccccchh
Confidence 3 3446677889999999986 457799999999999999999999999987654322111 11111111 00
Q ss_pred -----------hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 545 -----------FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 545 -----------~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+....+.-....-...+.+..+||.+|+++||.+|||++|.+++
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111122223467789999999999999999999999874
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=350.75 Aligned_cols=249 Identities=27% Similarity=0.384 Sum_probs=207.8
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc----Ch-hhHHHHHHHHHHHhhcC-CCccceeeeEEEeCC
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV----DE-TNVEQFINEVVILSQIN-HRNIVKLLGCCLETE 386 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 386 (597)
...++|.+.+.||+|+||+|+.|... +++.||+|.+... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 44578999999999999999999865 6899999965432 11 33556778999999999 999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeeccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGT 465 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfgl 465 (597)
..++||||+.+|+|.+++.+. ..+.+.++..+++|++.|++|+|+++ |+||||||+|||++.+ +++||+|||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence 999999999999999999873 34899999999999999999999999 9999999999999999 9999999999
Q ss_pred cccccCCCceeeecccccccccCccccccCC-CC-cccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQ-FT-EKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
+.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||... +....+.. +..+.
T Consensus 168 s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~------~~~~l~~k-i~~~~ 239 (370)
T KOG0583|consen 168 SAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS------NVPNLYRK-IRKGE 239 (370)
T ss_pred ccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc------cHHHHHHH-HhcCC
Confidence 98764 2334456678999999999999877 75 7999999999999999999999752 22222222 33322
Q ss_pred hhhhhhHHhhhhhhHHH-HHHHHHHHHHhcccCCCCCCCHHHHH
Q 038707 544 LFEALDARVLKEAKKEE-IMTVATLAKRCLNLNGKMRPTMKEVT 586 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~-~~~l~~li~~cl~~~p~~RPt~~evl 586 (597)
.. .+... +.++..|+.+||..||.+|+|+.+++
T Consensus 240 ~~----------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 FK----------IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred cc----------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 21 11222 66788999999999999999999998
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-42 Score=346.50 Aligned_cols=252 Identities=30% Similarity=0.399 Sum_probs=209.4
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
+...+|.++++||+|+|++|++|+.. .++.+|||++.. ..+....-+..|-.+|.+| .||.|++|+--|.|+..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34567999999999999999999965 689999998653 2333445567889999999 799999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
|+|+||+++|+|.++|++.. .+++.....++.||+.||+|||++| ||||||||+|||||+++++||+|||.|+.
T Consensus 150 YFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeecccccc
Confidence 99999999999999999764 4999999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCce------------eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 469 VMVDQTH------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 469 ~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
+...... .....+||..|.+||++..+..+..+|+|+||||||+|+.|++||.+.++-- .|.
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl------iFq 297 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL------IFQ 297 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH------HHH
Confidence 7532211 1144779999999999999999999999999999999999999998643211 111
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+ + +.-+.+...++.+.+||++.|..||.+|+|.++|-++
T Consensus 298 kI~---------~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 KIQ---------A--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHH---------H--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 111 1 1112334455778899999999999999999887653
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.5e-42 Score=317.70 Aligned_cols=262 Identities=25% Similarity=0.331 Sum_probs=208.4
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhh--HHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETN--VEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.+|...++||+|.||.||+|.+. +|+.||||+++..+..+ .....+||+.|+.++|+||+.|+++|.+.+.+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46778889999999999999965 79999999988754332 4567899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
||+ .+|...++.. ...++..++..++.++++||+|||++. |+||||||+|+|++++|.+||+|||+++.+....
T Consensus 82 fm~-tdLe~vIkd~--~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK--NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhccc--ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 5999999874 346999999999999999999999999 9999999999999999999999999999886544
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc---Cchhh---
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE---NRLFE--- 546 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 546 (597)
.... ...-|..|.|||++.+ ..|+...|+||.|||+.||+-|.+-|.+.+.-+ ........... ..+.+
T Consensus 156 ~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid---QL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 156 RIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID---QLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred cccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH---HHHHHHHHcCCCCcccCccccc
Confidence 4332 2367889999999876 579999999999999999999987776644322 22222222211 11111
Q ss_pred hhhH--------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 547 ALDA--------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 547 ~l~~--------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+.|- ......-...+..+.+|+.+|+..||.+|++++|++++
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111 11111223345667999999999999999999999874
No 21
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=379.81 Aligned_cols=261 Identities=30% Similarity=0.531 Sum_probs=220.6
Q ss_pred hcCCccCCcccccCceEEEEEEecC--Cc----EEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD--GR----IVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~----~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 388 (597)
..+..+.+.||+|+||.||.|...+ +. .||||.+.. .+.++..+|++|..+|++++|||||+++|++.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3456677899999999999999653 43 489998765 5677889999999999999999999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 389 LLVYEFIPNGTLYQYIHNQI----EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
+|++|||++|+|..||++.. ....++..+++.++.+||+|+.||++++ +|||||..+|+||++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999999752 1345999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecc-cccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 465 TSRSVMVDQTHLTTKV-QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
+|+.+...+.+..... .-...|||||.+..+.++.|+|||||||+|||++| |..||...+..+ .+....+.+
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~~~~~gg 921 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLLDVLEGG 921 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHHHHHhCC
Confidence 9997665444433332 34568999999999999999999999999999999 999997655443 122233344
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
++ +.+..+++.+.+|+..||+.+|++||++..+++++..+...
T Consensus 922 RL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 922 RL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred cc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 22 33577888899999999999999999999999999887653
No 22
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-42 Score=332.98 Aligned_cols=247 Identities=25% Similarity=0.435 Sum_probs=214.3
Q ss_pred hcCCccCCcccccCceEEEEEEe-cCCcEEEEEEcc---ccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSK---LVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
..+|++.+.||+|.||+|-+|.. ..|+.||||.++ +.++++.-.+++||+||+.|+||||++++.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35688889999999999999995 579999999654 45677788899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||..+|.|.||+.+.. .|++.+...+++||.+|+.|+|.++ ++|||||.+|||||+++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 99999999999998764 3999999999999999999999999 9999999999999999999999999997764
Q ss_pred CCceeeecccccccccCccccccCCC-CcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQF-TEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
.......++|.+-|.+||++.+.+| .+..|-||||++||-|+.|..||++.+.. .....+..|.+++-
T Consensus 205 -~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-------~lvrQIs~GaYrEP--- 273 (668)
T KOG0611|consen 205 -DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-------RLVRQISRGAYREP--- 273 (668)
T ss_pred -cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-------HHHHHhhcccccCC---
Confidence 3344567889999999999999888 57899999999999999999999875422 24445556655542
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+.+....-||++||..||++|.|+.+|...
T Consensus 274 --------~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 274 --------ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred --------CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 223345679999999999999999999764
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=317.75 Aligned_cols=236 Identities=29% Similarity=0.395 Sum_probs=203.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|+..+.||.|+||.|.+++.+ +|..+|+|.+.. ....+.+...+|..+|+.+.||.++++++.+.+.+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888899999999999999976 689999998764 33445677889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|.|.+++++..+ +++..+.-++.||+.||+|||+.+ |++|||||+|||||.+|.+||+|||+|+.....
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999997543 999999999999999999999999 999999999999999999999999999876432
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.-..+|||.|+|||+++...+..++|.|+|||++|||+.|.+||...++.. ..+.+-++.+
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~-------iY~KI~~~~v-------- 258 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ-------IYEKILEGKV-------- 258 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH-------HHHHHHhCcc--------
Confidence 556789999999999999999999999999999999999999998655421 2233333222
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCC
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMR 579 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~R 579 (597)
..+.....++.+|+.+.|+.|-.+|
T Consensus 259 --~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 --KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 1234455668899999999999888
No 24
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=352.90 Aligned_cols=263 Identities=29% Similarity=0.452 Sum_probs=216.0
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEecC--C--cE-EEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEE
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLTD--G--RI-VAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCL 383 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~--~~-vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 383 (597)
.+...++..+.++||+|+||.||+|.+.. + .. ||||..+. .......+|++|+++|++++|||||+++|+..
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33344555666899999999999999753 2 23 89998875 45778899999999999999999999999999
Q ss_pred eCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 384 ETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 384 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
.+..++||||++.+|+|.+||++... .++..+++.++.+.|.||+|||+++ ++||||.++|+|++.++.+||+||
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcc
Confidence 99999999999999999999998654 4999999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 464 GTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 464 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
|+++..... ........-...|+|||.+....|+.++|||||||++||+++ |..||.+....+ +...+..+
T Consensus 307 GLs~~~~~~-~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~-------v~~kI~~~ 378 (474)
T KOG0194|consen 307 GLSRAGSQY-VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE-------VKAKIVKN 378 (474)
T ss_pred ccccCCcce-eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH-------HHHHHHhc
Confidence 999765311 111112235678999999999999999999999999999999 899998755442 22222111
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
. .....+...+.++..++.+||..+|++||+|.++.+.|+.+...
T Consensus 379 ~--------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 379 G--------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred C--------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 1 11222335566788899999999999999999999999988754
No 25
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=360.29 Aligned_cols=255 Identities=24% Similarity=0.412 Sum_probs=221.1
Q ss_pred CccCCcccccCceEEEEEEecC----CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 319 YNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
..+.++||.|.||+|++|.++. ...||||.++... +....+|+.|+.||-+++||||++|.|+.......+||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 4566899999999999999863 3579999999744 5567889999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
||++|+|+.||+++. ..+++.++..+++.||.|+.||-+.+ ++||||.++|||++.+..+||+||||++.+.++.
T Consensus 711 yMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 999999999999865 34999999999999999999999999 9999999999999999999999999999776544
Q ss_pred ceee--ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 474 THLT--TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 474 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
.... ..-.-..+|.|||.+...+++.+|||||||++|||.++ |..||-.+..++ ....++.
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd----------------VIkaIe~ 849 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----------------VIKAIEQ 849 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH----------------HHHHHHh
Confidence 2222 22234578999999999999999999999999999998 999998766544 2233444
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+.-..+.+++..|.+|++.||++|-.+||.+.+|+..|++|-.
T Consensus 850 gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 850 GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 45556678999999999999999999999999999999998753
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-41 Score=342.59 Aligned_cols=246 Identities=28% Similarity=0.450 Sum_probs=210.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.. ..+.+...+.+|+++++.++||||+.++++|+....+++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999976 588999997654 345567889999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+.+ +|..+|.... .++++.+..++.+++.||.|||+.+ |+|||+||.|||++.++.+|++|||+++.... .
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST-N 153 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc-C
Confidence 9976 9999998654 3999999999999999999999999 99999999999999999999999999997754 4
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
....+...|||-|||||++.+..|+..+|.||||||||||++|++||..... . .....+.....
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~-~Lv~~I~~d~v--------- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------T-QLVKSILKDPV--------- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------H-HHHHHHhcCCC---------
Confidence 5567778899999999999999999999999999999999999999964221 1 11111111111
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...+..+..++...|.+||.+|.|..+++.
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 113456677999999999999999999998875
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=336.61 Aligned_cols=246 Identities=22% Similarity=0.394 Sum_probs=201.1
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChhh---HHHHHHHHHHHhhcCCCccceeeeEEEe----CCcceEEEecc
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETN---VEQFINEVVILSQINHRNIVKLLGCCLE----TEVPLLVYEFI 395 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 395 (597)
..|++|+++.||+|.+ +|+.||||+++...... .+.+.+|+.+|++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 68899999887543322 5778899999999999999999999977 34678999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++|+|.+++.+.. .+++...+.++.|++.||.|||+. + ++||||||+|||+++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999998642 488999999999999999999985 6 7899999999999999999999999987653221
Q ss_pred eeeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 475 HLTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ........+..
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~------~~~~i~~~~~~-------- 240 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE------IYDLIINKNNS-------- 240 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcCCC--------
Confidence 22347889999999976 689999999999999999999999997543221 11111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
...+...++.+.+|+.+||+.||++|||++|+++.|+.+..
T Consensus 241 -~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 241 -LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 01122346679999999999999999999999999998864
No 28
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-40 Score=333.48 Aligned_cols=256 Identities=21% Similarity=0.390 Sum_probs=207.8
Q ss_pred hcCCccCCcccccCceEEEEEEec----CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT----DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.++|++.+.||+|+||.||+|.+. .+..||+|..+.. .......+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356889999999999999999863 3568999988754 23445679999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.+|++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 999999999999998642 35899999999999999999999999 9999999999999999999999999876543
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~~~---- 227 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-------VIKAVEDGFRL---- 227 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCCCC----
Confidence 222111222335678999999999999999999999999999875 999997543221 12222222111
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
..+...+..+.+++.+||+.+|++||++++|++.|+++
T Consensus 228 -----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11233456789999999999999999999999999875
No 29
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-42 Score=345.28 Aligned_cols=240 Identities=32% Similarity=0.516 Sum_probs=204.6
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChh
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
++.||.|+.|.||+|++. ++.||||+++...+. +|+.|++|+||||+.+.|+|....-++|||||++.|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elkET-------dIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELKET-------DIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhhhh-------hHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 568999999999999985 789999988754443 578899999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeeccc
Q 038707 402 QYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQ 481 (597)
Q Consensus 402 ~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 481 (597)
..|+.. .+++......|..+||.|+.|||.+. |||||||+-||||..+..+||+|||-++..... .....+.
T Consensus 201 ~VLka~---~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFa 272 (904)
T KOG4721|consen 201 EVLKAG---RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFA 272 (904)
T ss_pred HHHhcc---CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhh
Confidence 999864 35899999999999999999999999 999999999999999999999999999876433 2334567
Q ss_pred ccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHH
Q 038707 482 GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEI 561 (597)
Q Consensus 482 gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 561 (597)
||..|||||++.+.+.++|.|||||||+|||||||..||...+.... ++..-...+....+..++
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------------IwGVGsNsL~LpvPstcP 337 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------------IWGVGSNSLHLPVPSTCP 337 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------------EEeccCCcccccCcccCc
Confidence 99999999999999999999999999999999999999976553321 111111122223456677
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 562 MTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 562 ~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
+-+.-|+++||+-.|..||++++++..|+-.
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999999999998743
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=339.80 Aligned_cols=249 Identities=26% Similarity=0.404 Sum_probs=212.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..|...+.||+|.||.||+|.+. .++.||+|.+.+. .+.+.+++.+|+.+|++++++||.++++.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 34666789999999999999975 6899999998864 445678899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+.+|++.+.|+... .+.+..+.-++++++.||.|||+++ .+|||||+.|||+..+|.+||+|||++-.......
T Consensus 93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999999997543 3588899999999999999999999 99999999999999999999999999987765444
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.. ....||+.|||||+++...|+.|+||||||++.+||.+|.+|+....+.- +.-++.+....
T Consensus 167 rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------------vlflIpk~~PP 229 (467)
T KOG0201|consen 167 RR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------------VLFLIPKSAPP 229 (467)
T ss_pred cc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------EEEeccCCCCC
Confidence 43 67789999999999998899999999999999999999999997665422 11112211222
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+..+.+|+..||..||+.||++.++++.
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 2234566779999999999999999999999864
No 31
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4e-41 Score=340.72 Aligned_cols=247 Identities=25% Similarity=0.338 Sum_probs=202.8
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
..+.|+++++||+|+||.||+++-+ +|+.+|+|+++. ....+++.++.|-.+|...++|+||+|+-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3578999999999999999999965 699999998774 345567788999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||++||++..+|.+. ..|+++.+..++.+++-|++.||+.| ++||||||+|+|||..|++||+||||+.-+.
T Consensus 219 iMEylPGGD~mTLL~~~---~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK---DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhc---CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999864 35999999999999999999999999 9999999999999999999999999985332
Q ss_pred CC----------------------Cce-----ee-------------------ecccccccccCccccccCCCCccccee
Q 038707 471 VD----------------------QTH-----LT-------------------TKVQGTFGYVDPEYFQSSQFTEKSDVY 504 (597)
Q Consensus 471 ~~----------------------~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~sDv~ 504 (597)
.. ... .. ....|||.|||||++.+..|+...|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 000 00 113499999999999999999999999
Q ss_pred ehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC
Q 038707 505 SFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT 581 (597)
Q Consensus 505 SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt 581 (597)
||||||||||.|.+||...++.+. ...+...+. . +..........+..+||.++|. ||++|..
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T-------~rkI~nwr~--~----l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQET-------YRKIVNWRE--T----LKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHHHhh--h----ccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999988766552 111111110 0 1111123334678899999998 9999976
No 32
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=310.78 Aligned_cols=265 Identities=25% Similarity=0.378 Sum_probs=216.1
Q ss_pred HhcCCccCCcccccCceEEEEEE-ecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cc
Q 038707 315 ATDNYNANRILGQGGQGTVYKGM-LTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VP 388 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 388 (597)
..++|.+.+.||+|||+.||+++ ..+++.+|+|++...+.++.+..++|++..++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45689999999999999999999 4578999999999888889999999999999999999999999876544 48
Q ss_pred eEEEeccCCCChhhHHhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEF-PITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
||+++|...|+|.+.+.....++ .+++.++++|+.+|.+||++||+... |++||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999998755443 69999999999999999999999874 69999999999999999999999999987
Q ss_pred cccCCCceee--------ecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 468 SVMVDQTHLT--------TKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 468 ~~~~~~~~~~--------~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
.....-.... .....|..|.|||++. +...++++|||||||+||+|+.|..||...-...+. +.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS-la---- 252 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS-LA---- 252 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe-EE----
Confidence 6542211111 1123688999999975 356789999999999999999999999754432211 10
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
.......+........++.+.+||++||+.||.+||++.+++..++.|-
T Consensus 253 --------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 --------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred --------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111112222222336778999999999999999999999999998764
No 33
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-40 Score=329.45 Aligned_cols=256 Identities=23% Similarity=0.426 Sum_probs=210.4
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.++|++.++||+|++|.||+|...++..||+|..... ....+.+.+|+.++++++|+||+++++.+.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3578999999999999999999888888999987643 334678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.++++... ...+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.........
T Consensus 84 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 84 AKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 9999999997642 335889999999999999999999998 999999999999999999999999999876433322
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||++....++.++||||||+++|+|++ |+.||......+ ....+......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 223 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-------VMSALQRGYRM--------- 223 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCCCC---------
Confidence 2233345678999999988889999999999999999998 999986533221 11122111110
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+.++.+++.+||..+|++||+++++++.|+++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11122345688999999999999999999999999864
No 34
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=344.26 Aligned_cols=267 Identities=25% Similarity=0.471 Sum_probs=215.1
Q ss_pred CHHHHHHHhcCCccCCcccccCceEEEEEEecCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC
Q 038707 308 TSKDLEKATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLET 385 (597)
Q Consensus 308 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 385 (597)
+.++.+...+...+.+.||+|.||+||+|.+.. .||||.+... .++..+.|++|+..+++-+|.||+-+.|++...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 345666667778888999999999999999864 4899987754 445788999999999999999999999999988
Q ss_pred CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
.. .||..++++-+|+.+||.... .+.....++|++||++|+.|||.++ |||||||..||+|.++++|||+|||+
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred ce-eeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccc
Confidence 88 999999999999999997543 4888999999999999999999999 99999999999999999999999999
Q ss_pred cccccC-CCceeeecccccccccCcccccc---CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 466 SRSVMV-DQTHLTTKVQGTFGYVDPEYFQS---SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 466 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
+..-.. ..........|...|||||++.. .+|++.+||||||+++|||++|..||. ....+. ..-++..
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dq------IifmVGr 607 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQ------IIFMVGR 607 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhh------eEEEecc
Confidence 854321 11122233347789999999754 579999999999999999999999998 332221 1112222
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
|-+. ++.. ......++++.+|+..||..++++||.+.+|+.+|+.+..
T Consensus 608 G~l~----pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 608 GYLM----PDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cccC----ccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 2111 1111 1235567789999999999999999999999998887765
No 35
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.6e-40 Score=347.25 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=206.8
Q ss_pred hcCCccCCcccccCceEEEEEEe------cCCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCc
Q 038707 316 TDNYNANRILGQGGQGTVYKGML------TDGRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEV 387 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 387 (597)
.++|++.+.||+|+||.||+|.. .++..||||+++.. .....+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45789999999999999999974 23568999988643 234456789999999999 89999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCC----------------------------------------------------------
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIE---------------------------------------------------------- 409 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 409 (597)
.++||||+++|+|.+++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999975321
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 410 --------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 410 --------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
...+++..++.++.||++||.|||+.+ |+||||||+|||+++++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788999999999999999999999 999999999999999999999999999765433221
Q ss_pred e-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 476 L-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 476 ~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
. .....++..|+|||.+.+..++.++||||||+++|||++ |..||....... .+...+..+..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~------~~~~~~~~~~~--------- 335 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS------KFYKMIKEGYR--------- 335 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH------HHHHHHHhCcc---------
Confidence 1 122334667999999999999999999999999999998 888986543221 12222222211
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
...+...+.++.+|+.+||+.||++||++.||+++|++.
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 011122345788999999999999999999999999864
No 36
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-40 Score=336.41 Aligned_cols=264 Identities=24% Similarity=0.396 Sum_probs=205.2
Q ss_pred hcCCccCCcccccCceEEEEEEecC-----------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccce
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-----------------GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVK 377 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 377 (597)
.++|.+.+.||+|+||.||++.+.+ +..||+|.+... ......++.+|+.++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578899999999999999998532 347999987753 3445678999999999999999999
Q ss_pred eeeEEEeCCcceEEEeccCCCChhhHHhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 038707 378 LLGCCLETEVPLLVYEFIPNGTLYQYIHNQIE----------------EFPITWELLLRIAVEVSGALFYLHSAASIPIY 441 (597)
Q Consensus 378 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~ 441 (597)
+++++.+.+..++||||+++++|.+++..... ...+++..++.++.||+.||.|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 99999999999999999999999999965321 124788999999999999999999999 99
Q ss_pred eccCCCCCeEeCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh--CCC
Q 038707 442 HRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT--GQK 518 (597)
Q Consensus 442 H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~--g~~ 518 (597)
||||||+|||+++++.+||+|||+++........ ......++..|+|||++....++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999765433222 2223345788999999988899999999999999999987 556
Q ss_pred CCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 519 PIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 519 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
||......+ ............... .....+...+..+.+|+.+||+.+|++|||+.+|.+.|++
T Consensus 241 p~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTDEQ---VIENAGEFFRDQGRQ------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCHHH---HHHHHHHHhhhcccc------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 776543222 111111111110000 0001112345678999999999999999999999998863
No 37
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.6e-40 Score=346.93 Aligned_cols=260 Identities=28% Similarity=0.470 Sum_probs=207.3
Q ss_pred hcCCccCCcccccCceEEEEEEec------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEV 387 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 387 (597)
.++|++.+.||+|+||.||++... ++..||+|++... .....+.+.+|+.+++.+ +|+||+++++++.+...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 457899999999999999999842 2357999998753 344466789999999999 89999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCC----------------------------------------------------------
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIE---------------------------------------------------------- 409 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 409 (597)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999999865321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce-eeec
Q 038707 410 ---------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-LTTK 479 (597)
Q Consensus 410 ---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~ 479 (597)
..++++.++++++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++........ ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 124788999999999999999999999 999999999999999999999999999765433222 1122
Q ss_pred ccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhH
Q 038707 480 VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKK 558 (597)
Q Consensus 480 ~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 558 (597)
..++..|||||++....++.++||||||+++|||++ |+.||....... .+...+..+. ....+.
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~~~~~~---------~~~~~~ 338 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKMVKRGY---------QMSRPD 338 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHHHHccc---------CccCCC
Confidence 335668999999988899999999999999999997 999997543221 1111111110 001111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 559 EEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 559 ~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
..+.++.+++.+||+.||.+|||+.+|+++|+++-
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 23467899999999999999999999999999863
No 38
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.9e-40 Score=328.32 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=209.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
..|.+.+.||+|++|.||+|... .++.||+|..... .....++.+|+.++++++|+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45788899999999999999976 5889999987643 344678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ...+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||++.........
T Consensus 85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 9999999997643 335899999999999999999999999 999999999999999999999999999776443322
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.......+..|+|||.+.+..++.++||||||+++|||++ |..||.....++ ....+... ...
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~---------~~~ 224 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKG---------YRM 224 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCC---------CCC
Confidence 2222334668999999998999999999999999999998 999986543221 11111111 111
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
..+...+.++.+++.+||+.+|++||++.+++++|+++
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 12233456789999999999999999999999999876
No 39
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-41 Score=333.25 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=204.1
Q ss_pred cCHHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--------------ChhhHHHHHHHHHHHhhcC
Q 038707 307 FTSKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--------------DETNVEQFINEVVILSQIN 371 (597)
Q Consensus 307 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--------------~~~~~~~~~~E~~~l~~l~ 371 (597)
+...+-.+..++|++.+.||+|.||.|-+|... +++.||||++... .....++..+||.+|++++
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 344444556689999999999999999999976 6999999975431 1123568999999999999
Q ss_pred CCccceeeeEEEe--CCcceEEEeccCCCChhhHHhhcCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCC
Q 038707 372 HRNIVKLLGCCLE--TEVPLLVYEFIPNGTLYQYIHNQIEEFP-ITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSA 448 (597)
Q Consensus 372 h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~ 448 (597)
|||||+|+++..+ .+.+|||+||+..|.+.+.- ...+ +++.+++++++.++.||+|||.++ |+||||||+
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPs 239 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPS 239 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchh
Confidence 9999999999976 56889999999988775542 2234 999999999999999999999999 999999999
Q ss_pred CeEeCCCCcEEEeeccccccccCCC----ceeeecccccccccCccccccCC----CCcccceeehHHHHHHHHhCCCCC
Q 038707 449 NILLDDKYRAKVSDFGTSRSVMVDQ----THLTTKVQGTFGYVDPEYFQSSQ----FTEKSDVYSFGVVLVEILTGQKPI 520 (597)
Q Consensus 449 NIll~~~~~~kl~Dfgl~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~SlG~il~ell~g~~p~ 520 (597)
|+||+++|++||+|||.+....... ........|||.|||||...++. .+.+.||||+||+||.|+.|+.||
T Consensus 240 NLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 240 NLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred heEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 9999999999999999997663221 11123366999999999987632 367899999999999999999999
Q ss_pred CCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 521 RAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+...-+ ....+.+. .+......+..+++.+||++||++||++|.++.+|...
T Consensus 320 ~~~~~~~-------l~~KIvn~--------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 320 FDDFELE-------LFDKIVND--------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred ccchHHH-------HHHHHhcC--------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 7532211 11222221 12222233556778999999999999999999998654
No 40
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.4e-40 Score=329.94 Aligned_cols=257 Identities=26% Similarity=0.459 Sum_probs=214.0
Q ss_pred HhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
...+|++.+.||+|+||.||+|...+++.+++|.+.........++.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34568899999999999999999888999999998876666678899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999998643 345899999999999999999999999 99999999999999999999999999976543221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
......++..|+|||.+....++.++||||||+++++|++ |+.||......+ ....+..+ ..
T Consensus 160 -~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~---------~~ 222 (261)
T cd05148 160 -LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-------VYDQITAG---------YR 222 (261)
T ss_pred -cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHHhC---------Cc
Confidence 1223345678999999988899999999999999999998 899996543211 11111111 11
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
...+...++.+.++|.+||+.+|.+|||++++++.|+++
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 111234456788999999999999999999999999874
No 41
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5e-40 Score=327.80 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=209.5
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.++|++.+.||+|++|.||+|.+.+++.||+|..+... ...+++.+|+.++++++||||+++++++...+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688999999999999999998778889999887533 34567899999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||+++........
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999997643 335899999999999999999999999 999999999999999999999999999876532222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.......+..|+|||++.+..++.++||||||++++||++ |+.||....... ....+..... .
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 223 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-------VLQQVDQGYR---------M 223 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC---------C
Confidence 2222223457999999998899999999999999999999 999986543211 1111111110 0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+..+.+++.+||+.+|.+||+++++++.|+.+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 11223456789999999999999999999999999864
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-40 Score=342.83 Aligned_cols=247 Identities=26% Similarity=0.429 Sum_probs=212.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+-|++++-||.|+-|.|-+|++. +|+.+|||.+... .......+-+||.+|+.+.|||+++|++++.+...+|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45888999999999999999975 7999999987653 3334567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|-|++++.++. ++++.++.++++||+.|+.|+|..+ |+||||||+|+|||..+++||+|||+|....
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~-- 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEV-- 163 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeeccc--
Confidence 9999999999998653 5999999999999999999999999 9999999999999999999999999997643
Q ss_pred CceeeecccccccccCccccccCCC-CcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQF-TEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
....-...+|.+.|.+||++.+.+| +.++||||.|||||.||+|+.||++.+ +......+..|..
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-------ir~LLlKV~~G~f------- 229 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-------IRVLLLKVQRGVF------- 229 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-------HHHHHHHHHcCcc-------
Confidence 3345667789999999999999887 579999999999999999999997432 1123334444432
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+.+...+.+..+|+.+||..||++|.|++||+++
T Consensus 230 ---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 ---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2345566778999999999999999999999875
No 43
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.8e-40 Score=326.38 Aligned_cols=252 Identities=28% Similarity=0.443 Sum_probs=205.3
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
+.|++.+.||+|+||.||++.+.++..+|+|..... ....+++.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457888999999999999999888888999987632 3335678999999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+|+|.++++... ..+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||+++.........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 999999997643 24899999999999999999999999 9999999999999999999999999987654333222
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-------~~~~i~~~~~~---------~ 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-------VVEMISRGFRL---------Y 221 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCCC---------C
Confidence 223345668999999988889999999999999999999 899986543211 11222221110 0
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.+...+..+.+|+.+||+.+|++||++.++++.|.
T Consensus 222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01123456899999999999999999999999873
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.8e-40 Score=331.37 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=203.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.|+..+.||+|+||+||++... +++.||+|.+.... ......+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3778889999999999999975 68999999875322 2234567899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 999999998886542 235899999999999999999999999 9999999999999999999999999997653222
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
......|+..|+|||++.+..++.++||||||+++|||++|+.||......... ......+... .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~~~~~~----------~ 221 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR---EEVDRRVKED----------Q 221 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH---HHHHHHhhcc----------c
Confidence 223446899999999999999999999999999999999999999765432211 1111111110 0
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPT-----MKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~evl~~ 588 (597)
.......+..+.+|+.+||+.||.+||+ ++++++.
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 1112334567889999999999999997 7888763
No 45
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8.7e-40 Score=330.04 Aligned_cols=257 Identities=29% Similarity=0.478 Sum_probs=210.1
Q ss_pred cCCccCCcccccCceEEEEEEecC-C-----cEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-G-----RIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~-----~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
++|++.+.||+|+||.||+|.... + ..||+|.+.... .....++.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998643 2 579999876433 344567899999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC
Q 038707 390 LVYEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY 456 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~ 456 (597)
++|||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999976421 135889999999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHH
Q 038707 457 RAKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGY 534 (597)
Q Consensus 457 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~ 534 (597)
.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE------- 234 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999976543222 12233346788999999988899999999999999999998 999997644322
Q ss_pred HHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 535 FLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
....+..+.. ...+...+.++.+|+.+||+.||.+||+++||++.|+++
T Consensus 235 ~~~~i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEMIRSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 2222222221 112345567899999999999999999999999999864
No 46
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.3e-40 Score=333.90 Aligned_cols=245 Identities=27% Similarity=0.360 Sum_probs=202.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36889999999999999999976 6899999987642 2234567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997643 4899999999999999999999999 999999999999999999999999999765322
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+..+..
T Consensus 155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-------~~~~i~~~~~-------- 215 (291)
T cd05612 155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-------IYEKILAGKL-------- 215 (291)
T ss_pred ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCc--------
Confidence 123458999999999998889999999999999999999999997543211 1111211111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPT-----MKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~evl~~ 588 (597)
..+......+.+|+.+||+.||.+||+ ++++++.
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112223456889999999999999995 8887754
No 47
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4e-40 Score=333.28 Aligned_cols=262 Identities=24% Similarity=0.295 Sum_probs=202.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|+||+||++..+ +++.+|+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46899999999999999999986 5889999987643 23345678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|++++.+..+... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 9998776655432 234899999999999999999999999 9999999999999999999999999998764333
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh-----------cC
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN-----------EN 542 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-----------~~ 542 (597)
........|++.|+|||++.+..++.++||||||+++|||++|+.||......+. +. ....... ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ--LF-TIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH--HH-HHHHhhCCCCHHHHHhhhcc
Confidence 3333345689999999999988899999999999999999999999976432211 00 0000000 00
Q ss_pred chhhhhh-HH------hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 543 RLFEALD-AR------VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 543 ~~~~~l~-~~------~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....... +. .........+..+.+|+.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 232 PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 00 000011124567999999999999999999999986
No 48
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=339.39 Aligned_cols=263 Identities=29% Similarity=0.463 Sum_probs=229.9
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEecC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
+++-.........+||-|.||.||.|.|+. .-.||||.++. +.-..++|+.|+.+|+.++|||+|+|+|+|..+..+|
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 333333445667899999999999999975 67899999884 4557899999999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
||.|||..|+|.+||++.. +..++...++.++.||+.|++||..++ +|||||..+|.|+.++..+||+||||++++
T Consensus 340 IiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999999874 445888899999999999999999999 999999999999999999999999999998
Q ss_pred cCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
..+.............|.|||-+..+.++.|+|||+|||+|||+.| |-.||.+.+..+ +.+++
T Consensus 416 tgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq----------------VY~LL 479 (1157)
T KOG4278|consen 416 TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------------VYGLL 479 (1157)
T ss_pred cCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH----------------HHHHH
Confidence 7665555555566789999999999999999999999999999999 889988765333 34556
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
...+..+.+..+++.+.+|++.||+++|.+||++.|+-+.|+.+-.
T Consensus 480 EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 480 EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 6667777788899999999999999999999999999999987753
No 49
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-40 Score=343.26 Aligned_cols=245 Identities=27% Similarity=0.385 Sum_probs=208.5
Q ss_pred HHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCc
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEV 387 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 387 (597)
....++|.+.++||+|.||+|+++..+ +++.+|||.++. ....+++..+.|..|+.... ||.++.|+.+|...+.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 334578999999999999999999987 588999998774 45667888999999998885 9999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
+++||||+.||++..+.+.. .+++..+.-++..|+.||.|||+++ ||+||||.+|||||.+|.+||+|||+++
T Consensus 444 l~fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence 99999999999965555432 3999999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
...... ..+...+|||.|||||++.+..|+.+.|.|||||+|||||.|..||.+.++++. |...+.+...
T Consensus 517 e~m~~g-~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~------FdsI~~d~~~--- 586 (694)
T KOG0694|consen 517 EGMGQG-DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV------FDSIVNDEVR--- 586 (694)
T ss_pred ccCCCC-CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHhcCCCC---
Confidence 765333 356778999999999999999999999999999999999999999998765551 2121111111
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
.+...+.+...|++++|.++|++|..+
T Consensus 587 --------yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 --------YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --------CCCcccHHHHHHHHHHhccCcccccCC
Confidence 234456678899999999999999876
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.3e-40 Score=339.26 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=205.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||.||+|.+. +++.||||.+... .......+.+|+.++.+++||||+++++++.+.+..+|||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 5899999987642 2234567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997542 4899999999999999999999999 99999999999999999999999999976533
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. + ..+.... ..+....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~------~-~~i~~~~--~~~~~~~ 221 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET------W-ENLKYWK--ETLQRPV 221 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH------H-HHHHhcc--ccccCCC
Confidence 23345689999999999989999999999999999999999999975443221 1 1111100 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
........+.++.+|+.+||+.+|.+||+++++++.
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 011112345678899999999999999999999865
No 51
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.7e-39 Score=328.97 Aligned_cols=260 Identities=28% Similarity=0.486 Sum_probs=212.7
Q ss_pred cCCccCCcccccCceEEEEEEec------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++|.+.+.||+|+||+||++... ++..+|+|.+..........+.+|+.++++++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 57889999999999999999842 345789998877666677889999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 391 VYEFIPNGTLYQYIHNQI----------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
||||+++++|.+++.... ....+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999997542 1234899999999999999999999999 999999999999999999999
Q ss_pred eeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHH
Q 038707 461 SDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQA 538 (597)
Q Consensus 461 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 538 (597)
+|||++......... ......++..|+|||.+.+..++.++||||||+++++|++ |..||......+ ....
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-------~~~~ 234 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIEC 234 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHH
Confidence 999999765432221 1222335678999999998899999999999999999998 899986543221 1222
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
+..+.... .....+.++.+|+.+||+.+|.+|||+.+|++.|+++.+.
T Consensus 235 i~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 22222111 1122345689999999999999999999999999998764
No 52
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.9e-40 Score=329.33 Aligned_cols=249 Identities=35% Similarity=0.602 Sum_probs=197.4
Q ss_pred cCCcccccCceEEEEEEec-----CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 321 ANRILGQGGQGTVYKGMLT-----DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~-----~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+.+.||.|.||.||+|.+. .+..|+||.++.. .....+++.+|++.+++++||||++++|++.+.+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4568999999999999986 2578999998653 344588999999999999999999999999988889999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++|+|.++|+.. ....+++..++.|+.||++||.|||+.+ ++|+||+++|||+++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999986 2335899999999999999999999998 99999999999999999999999999987632222
Q ss_pred -eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 475 -HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 475 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
...........|+|||.+....++.++||||||+++|||++ |+.||......+ +...+.++...
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-------~~~~~~~~~~~------- 224 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-------IIEKLKQGQRL------- 224 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-------HHHHHHTTEET-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccc-------
Confidence 22333446789999999999899999999999999999999 788886542211 22222222221
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
..+...+..+.++|.+||+.+|++|||+++++++|
T Consensus 225 --~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 --PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11233456688999999999999999999999987
No 53
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.3e-39 Score=328.07 Aligned_cols=256 Identities=30% Similarity=0.513 Sum_probs=208.9
Q ss_pred cCCccCCcccccCceEEEEEEecC------CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
++|.+.+.||+|+||.||+|...+ ++.||||..+..... ..+.+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 468888999999999999998643 478999988754444 4678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 390 LVYEFIPNGTLYQYIHNQIE-----------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
+||||+++++|.+++..... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 99999999999999976421 235889999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~ 536 (597)
||+|||++........ .......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-------~~ 234 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-------VI 234 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HH
Confidence 9999999976533221 11223345778999999999999999999999999999998 999986543222 11
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..+..+... ..+...+..+.+++.+||+.||++||++.||+++|++
T Consensus 235 ~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 235 ECITQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 222222211 1122345678999999999999999999999999864
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.3e-39 Score=335.38 Aligned_cols=241 Identities=23% Similarity=0.331 Sum_probs=198.4
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||.||++... +|+.||||.++.. .......+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 3344567889999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeee
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT 478 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~ 478 (597)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~ 153 (323)
T cd05571 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMK 153 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Cccc
Confidence 999999754 34899999999999999999999999 9999999999999999999999999987543221 2233
Q ss_pred cccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhH
Q 038707 479 KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKK 558 (597)
Q Consensus 479 ~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 558 (597)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...+... ....+..+.. ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------~~~~~~~~~~----------~~p~ 216 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-------LFELILMEEI----------RFPR 216 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-------HHHHHHcCCC----------CCCC
Confidence 4569999999999999999999999999999999999999996532211 1111111111 1123
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 559 EEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 559 ~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..+.++.+|+.+||+.||++|| ++.++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 3456788999999999999999 7888875
No 55
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1e-39 Score=336.90 Aligned_cols=245 Identities=26% Similarity=0.335 Sum_probs=202.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||.||++.+. +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56899999999999999999976 5899999987642 2234567899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999998643 4889999999999999999999999 999999999999999999999999999765332
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. ....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+..+..
T Consensus 172 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~~~i~~~~~-------- 232 (329)
T PTZ00263 172 T----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-------IYEKILAGRL-------- 232 (329)
T ss_pred c----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-------HHHHHhcCCc--------
Confidence 2 23468999999999999999999999999999999999999996432111 1122222211
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPT-----MKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~evl~~ 588 (597)
..+...+..+.+||.+||+.||.+||+ ++++++.
T Consensus 233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011123456789999999999999997 6777643
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-39 Score=334.64 Aligned_cols=262 Identities=28% Similarity=0.416 Sum_probs=206.1
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.++|++.+.||+|+||.||++... ++..+|+|..... .....+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467999999999999999999976 5889999987753 33456789999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+. |+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 999999999997643 48999999999999999999998532 999999999999999999999999998765322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh-------------
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN------------- 540 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 540 (597)
......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ +...+.....
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcc
Confidence 2233468999999999999899999999999999999999999996533211 0000000000
Q ss_pred -----------------cCchhhhhhHHhhh----hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 541 -----------------ENRLFEALDARVLK----EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 541 -----------------~~~~~~~l~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+..+..... ......+.++.+||.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000111110000 0011245679999999999999999999999875
No 57
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.2e-39 Score=322.97 Aligned_cols=255 Identities=25% Similarity=0.439 Sum_probs=208.2
Q ss_pred cCCccCCcccccCceEEEEEEecC----CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
++|++.+.||+|+||+||+|.+.. ...||||..... ......++.+|+.++++++||||+++++.+.+.+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568899999999999999999752 457999987653 344566899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+|+||||+|||+++++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999976432 5899999999999999999999999 99999999999999999999999999987652
Q ss_pred CCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 472 DQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 472 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
.... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ ....+......
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~---- 227 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-------VIKAVEDGYRL---- 227 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCCCC----
Confidence 2222 2222335678999999998899999999999999999998 999986432211 11222211110
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+..+.+|+.+||+.+|++||++++|+++|+++
T Consensus 228 -----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -----PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11223456789999999999999999999999999875
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-39 Score=322.98 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=205.2
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
++|.+.+.||+|++|+||+|.+.++..+|+|.+.... ...+++.+|+.++++++||||+++++++.+.+..+++|||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4578889999999999999998777789999877432 334679999999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+||++++++.+||+|||+++.........
T Consensus 83 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 83 NGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 9999999976432 4899999999999999999999999 9999999999999999999999999987654333222
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....++..|+|||.+.+..++.++||||||+++|+|++ |+.||......+ ....+..+... .
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~---------~ 221 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-------TVEKVSQGLRL---------Y 221 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHhcCCCC---------C
Confidence 222335678999999988889999999999999999998 999986543221 11111111110 0
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.....+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11123467899999999999999999999998874
No 59
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.2e-39 Score=327.46 Aligned_cols=260 Identities=27% Similarity=0.451 Sum_probs=212.8
Q ss_pred cCCccCCcccccCceEEEEEEec------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.+|.+.+.||+|+||.||++... ++..+++|............+.+|+.++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999842 345789999877666666789999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 391 VYEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
||||+++++|.+++..... ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 9999999999999976421 234899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHH
Q 038707 458 AKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 458 ~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~ 535 (597)
+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ .
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~ 234 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------V 234 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------H
Confidence 99999999976543222 12223446788999999998899999999999999999999 999986543221 1
Q ss_pred HHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 536 LQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
...+..+...+ .....+..+.+++.+||+.+|++|||+++|+++|+++.+.
T Consensus 235 ~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 235 IECITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 22222222211 1223456789999999999999999999999999998653
No 60
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-40 Score=302.88 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=210.2
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
.++|++.+.||+|-||.||.|..+ ++-.||+|.+... ......++.+|++|.+.|+||||++++++|.++...||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356899999999999999999975 6789999987632 233356799999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
+||.++|.|...|.+.. ...+++...+.++.|+|.||.|+|..+ |+||||||+|+|++..+.+||+|||.+-..+
T Consensus 101 lEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 99999999999998643 334889999999999999999999999 9999999999999999999999999986543
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.......+||..|+|||...+..++...|+|++|++.||++.|.+||.....++ ..+.++.-++
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-------tYkrI~k~~~------- 239 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-------TYKRIRKVDL------- 239 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-------HHHHHHHccc-------
Confidence 334556789999999999999999999999999999999999999997544222 2222222111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+...+....+||.+|+..+|.+|.+..|+++.
T Consensus 240 ---~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 ---KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ---cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1234556678899999999999999999999864
No 61
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1e-39 Score=330.62 Aligned_cols=261 Identities=24% Similarity=0.323 Sum_probs=201.0
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|+||+||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46899999999999999999976 68899999876432 23345778999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++ ++|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 97 49999987543 24789999999999999999999999 99999999999999999999999999876432221
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc------------
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE------------ 541 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 541 (597)
......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+.... .......
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 159 -TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL---IFRLLGTPTEETWPGITSN 234 (288)
T ss_pred -cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChHHhhccccc
Confidence 1233457899999998865 5689999999999999999999999976543221111 1111000
Q ss_pred CchhhhhhHHhh----hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 NRLFEALDARVL----KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 ~~~~~~l~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......+.+... .......+.++.+|+.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000 0011123456889999999999999999999985
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3e-39 Score=340.55 Aligned_cols=263 Identities=26% Similarity=0.408 Sum_probs=210.2
Q ss_pred HHhcCCccCCcccccCceEEEEEEecC------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeC
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLV-DETNVEQFINEVVILSQIN-HRNIVKLLGCCLET 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 385 (597)
...++|.+.++||+|+||.||+|.+.. +..||||++... .....+.+.+|+.+++++. ||||+++++++.+.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 345678999999999999999998531 347999988753 3344578999999999996 99999999999999
Q ss_pred CcceEEEeccCCCChhhHHhhcCC--------------------------------------------------------
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIE-------------------------------------------------------- 409 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 409 (597)
+..+|||||+++|+|.++++....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999999875321
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe
Q 038707 410 -------------------------------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL 452 (597)
Q Consensus 410 -------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll 452 (597)
...+++..++.++.||++||.|||+.+ |+|+||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEE
Confidence 124788899999999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCc
Q 038707 453 DDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKS 530 (597)
Q Consensus 453 ~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~ 530 (597)
++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--- 347 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--- 347 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH---
Confidence 99999999999999765432221 1222346778999999988899999999999999999997 999987543221
Q ss_pred HHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 531 LVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+...+..+.. .......+..+.+++.+||+.+|++||++.+|.++|+++..
T Consensus 348 ---~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 ---TFYNKIKSGYR---------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHHHHhcCCC---------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11122222111 11123445678999999999999999999999999998754
No 63
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-40 Score=334.27 Aligned_cols=251 Identities=30% Similarity=0.416 Sum_probs=216.4
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc-ceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEV-PLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 392 (597)
++|..++++|+|+||.++..+.+ ++..+++|++.... ........+|+.++++++|||||.+.+.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57899999999999999999876 57899999877643 3344578899999999999999999999999998 99999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
+|++||+|.+.+.+.. +..++++.+..|+.|++.|+.|||+.. |+|||||+.|||++.+..+||.|||+|+.+..+
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999865 456999999999999999999999888 999999999999999999999999999987654
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .......||+.||.||++.+.+|..|+|||||||++|||++-+++|...+..+ +. ..+.. ..
T Consensus 160 ~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---Li----~ki~~---------~~ 222 (426)
T KOG0589|consen 160 D-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---LI----LKINR---------GL 222 (426)
T ss_pred h-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---HH----HHHhh---------cc
Confidence 4 34556779999999999999999999999999999999999999998655433 11 11111 11
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+...+.++..||..||+.+|..||++.+++.+
T Consensus 223 ~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 233456777889999999999999999999999986
No 64
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=341.51 Aligned_cols=252 Identities=27% Similarity=0.490 Sum_probs=213.0
Q ss_pred cCCcccccCceEEEEEEec-CC----cEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 321 ANRILGQGGQGTVYKGMLT-DG----RIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~-~~----~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..++||+|+||+||+|.+- +| -+||||.+.. ...+...++++|+.+|.+++|||+++|++++..+. +.||.+|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 3578999999999999963 44 3688887654 44556789999999999999999999999999877 8899999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++.|+|.+|++.+.. .+..+..+.|..|||+||.|||.+. ++||||..+|||+.+-..+||+|||+++.+..+..
T Consensus 779 mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred cccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999998644 4899999999999999999999998 99999999999999999999999999998875544
Q ss_pred ee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 475 HL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 475 ~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.. .....-.+.|||-|.+....|+.++|||||||++||++| |..|+++...++..++ +....
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl----------------le~ge 917 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL----------------LEKGE 917 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH----------------Hhccc
Confidence 32 333344678999999999999999999999999999999 9999998877663222 22222
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.-..+...+.++..++.+||..|+..||+++++.+++.++-.
T Consensus 918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 223356677789999999999999999999999999987654
No 65
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.5e-39 Score=320.73 Aligned_cols=254 Identities=26% Similarity=0.435 Sum_probs=205.3
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.++|++.+.||+|++|.||+|...++..+|+|....... ..+.+.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 356888999999999999999988888899998775332 3467999999999999999999999875 45689999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.++++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++.........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 83 SKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 9999999997642 234899999999999999999999999 999999999999999999999999999765433222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ ....+..+. ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------~~ 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERGY---------RM 222 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCC---------CC
Confidence 2222335668999999988889999999999999999999 889986533211 111111110 11
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..+...+..+.+|+.+||+.+|++|||+.++.+.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1123345678999999999999999999999999975
No 66
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.8e-39 Score=337.09 Aligned_cols=259 Identities=21% Similarity=0.283 Sum_probs=200.0
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..+|++.+.||+|+||.||++.+. +++.||||... ...+.+|+.++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999975 68999999643 24578899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+. ++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 165 ~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 165 YK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred CC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 95 78988887542 4899999999999999999999999 99999999999999999999999999975432222
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCC----cHHHHHHHHHhcCc------h
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDK----SLVGYFLQAINENR------L 544 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~------~ 544 (597)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||......... .............. .
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 2334456999999999999889999999999999999999999887543221110 01111111000000 0
Q ss_pred hhhhhHHh---------------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 FEALDARV---------------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ~~~l~~~~---------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...++... ........+.++.+||.+||+.||.+|||++|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 00011234567899999999999999999999985
No 67
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-40 Score=318.56 Aligned_cols=269 Identities=25% Similarity=0.338 Sum_probs=212.4
Q ss_pred HHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcc--ccChhhHHHHHHHHHHHhhcCCCccceeeeEEEe-----
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSK--LVDETNVEQFINEVVILSQINHRNIVKLLGCCLE----- 384 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----- 384 (597)
..+...|...+.||+|+||.|..+..+ +|+.||||++. ..+....++..+|+++|+.++|+||+.+++.+..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344556777889999999999999976 68999999987 5667778899999999999999999999999875
Q ss_pred CCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
-+..|+|+|+| ..+|...++... .|+.+.+..++.||++||.|+|+.+ |+||||||+|+|++.+-.+||+|||
T Consensus 98 f~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred cceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccc
Confidence 34679999999 668999988643 3999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCC-CceeeecccccccccCccccc-cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHH-------
Q 038707 465 TSRSVMVD-QTHLTTKVQGTFGYVDPEYFQ-SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF------- 535 (597)
Q Consensus 465 l~~~~~~~-~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~------- 535 (597)
+|+..... .....+.+..|..|.|||++. ...|+.+.||||.||||.||++|++-|.+.+.-+.-.++...
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 99987532 223356677899999999875 478999999999999999999999999886654433222211
Q ss_pred -HHHHhcCchhhhhhH------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 536 -LQAINENRLFEALDA------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 536 -~~~~~~~~~~~~l~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+........+.. ......-....+...+|+.+||..||.+|+|++|.++.
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 122221111111110 00011112334567899999999999999999999863
No 68
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.3e-39 Score=321.37 Aligned_cols=260 Identities=25% Similarity=0.369 Sum_probs=211.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||.||+|... +++.||||.... ........+.+|+.++++++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999975 689999997653 23445567899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQIE-EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
||+++++|.+++..... ...+++..++.++.|+++||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999999865322 345889999999999999999999999 99999999999999999999999999876543
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
... ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||...... ... ....+......
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~~~-~~~~~~~~~~~------ 226 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LFS-LCQKIEQCDYP------ 226 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----HHH-HHHHHhcCCCC------
Confidence 221 122345788999999998888999999999999999999999998643221 111 11222211111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
.......+..+.+++.+||+.+|++||++.+|++.|++++
T Consensus 227 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 --PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1112334567899999999999999999999999999986
No 69
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.7e-39 Score=324.55 Aligned_cols=258 Identities=27% Similarity=0.481 Sum_probs=206.3
Q ss_pred HhcCCccCCcccccCceEEEEEEec------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEV 387 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 387 (597)
..++|++.+.||+|+||.||+|.+. .++.||||+.... ......++.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4577999999999999999999753 2567999987543 23445678999999999999999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIE-------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
.++||||+++++|.+++.+... ...+++..++.++.|+++||.|||+.+ ++|+||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 9999999999999999976322 234678899999999999999999998 999999999999999999999
Q ss_pred eeccccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHH
Q 038707 461 SDFGTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQA 538 (597)
Q Consensus 461 ~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 538 (597)
+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||......+ ....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~-------~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ-------VLRF 233 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHH
Confidence 9999987654322211 122335778999999998889999999999999999999 788886543221 1122
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
+..+... ..+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 234 VMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2122111 1122334568999999999999999999999999864
No 70
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.3e-39 Score=330.50 Aligned_cols=256 Identities=24% Similarity=0.490 Sum_probs=205.4
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc----EEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR----IVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~----~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.+|+..+.||+|+||.||+|.+. +++ .||+|.++.. .....+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 45889999999999999999864 333 4899988643 344567899999999999999999999998764 5689
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
++||+++|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999986532 4889999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
...... ......+..|+|||.+.+..++.++||||||+++|||++ |+.||......+ +......+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~--- 230 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGERL--- 230 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHhCCCCC---
Confidence 433221 222334678999999999999999999999999999998 999986533221 11222211110
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
..+...+..+.+++.+||+.+|.+||++.+++..|..+..
T Consensus 231 ------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 ------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0112233468899999999999999999999999988764
No 71
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.3e-39 Score=323.32 Aligned_cols=262 Identities=24% Similarity=0.434 Sum_probs=212.4
Q ss_pred hcCCccCCcccccCceEEEEEEecC-----CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEe-CCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-----GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLE-TEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 388 (597)
.++|++.++||+|+||.||+|.+.+ +..|++|++... .....+.+.+|+.++++++|+||+++++++.+ ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678999999999999999999765 688999987643 44556778999999999999999999998776 5678
Q ss_pred eEEEeccCCCChhhHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEE-----FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
++++||+++++|.+++...... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999999764322 45899999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 464 GTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 464 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
|+++.+...... ......++..|+|||++.+..++.++||||||+++||+++ |+.||......+ ....+..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~ 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-------MAAYLKD 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHc
Confidence 999865433322 1222345678999999988889999999999999999999 999996533211 1112211
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhhc
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTSI 596 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~~ 596 (597)
+.. .......++++.+++.+||+.+|++|||+.++++.|+.+.+.+
T Consensus 235 ~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~~ 280 (280)
T cd05043 235 GYR---------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQL 280 (280)
T ss_pred CCC---------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhcC
Confidence 110 0011223457899999999999999999999999999998754
No 72
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-39 Score=319.80 Aligned_cols=267 Identities=28% Similarity=0.427 Sum_probs=205.4
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhc--CCCccceeeeEEEeCC----cceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQI--NHRNIVKLLGCCLETE----VPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~----~~~l 390 (597)
...++.++||+|.||.||||.++ ++.||||++. ..+.+.|.+|-.|.+.. +|+||+++++.-.... .++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34556678999999999999985 5999999986 66777888888887764 7999999999877655 7899
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSA------ASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
|+||.+.|+|.+||..+. ++|....+|+..+++||+|||+. .+++|+|||||++||||..++++.|+|||
T Consensus 286 Vt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999998764 99999999999999999999973 35789999999999999999999999999
Q ss_pred ccccccCCCce-eeecccccccccCccccccCC-CC-----cccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHH
Q 038707 465 TSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQ-FT-----EKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 537 (597)
Q Consensus 465 l~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 537 (597)
+|..+...... ......||.+|||||++.+.. +. .+.||||+|.+||||+++-..++.....+.+- .|..
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yql---pfe~ 438 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQL---PFEA 438 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccC---chhH
Confidence 99887644332 233367999999999997632 22 37999999999999999876654322111111 1222
Q ss_pred HHhcCchhhhhhHHhhhh----------hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 538 AINENRLFEALDARVLKE----------AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~----------~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+....-.+-+...+..+ .....+..+.+.+..||..||+.|.|+.=|.+++.+|..
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 222222222111111110 112345678999999999999999999999999988764
No 73
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.6e-39 Score=330.40 Aligned_cols=239 Identities=27% Similarity=0.339 Sum_probs=195.2
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|+||.||++... +++.||+|.+.. ........+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999976 588999998763 2344567788999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecc
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKV 480 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 480 (597)
.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ......
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 153 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTF 153 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccccc
Confidence 99997642 4899999999999999999999999 9999999999999999999999999987543222 223345
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
.||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..+..... ... ..+...
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~-~~~----------~~~~~~ 216 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQ-EPL----------RFPDGF 216 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHc-CCC----------CCCCcC
Confidence 6899999999999999999999999999999999999999753211 11111111 110 112334
Q ss_pred HHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRPT---MKEVTN 587 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt---~~evl~ 587 (597)
+..+.+|+.+||+.||.+||+ +.|+++
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 566889999999999999986 455543
No 74
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.4e-39 Score=325.94 Aligned_cols=264 Identities=28% Similarity=0.440 Sum_probs=205.8
Q ss_pred cCCccCCcccccCceEEEEEEec-----CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccce
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-----DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPL 389 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 389 (597)
+.|++.+.||+|+||.||++... +++.||+|++........+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999742 4789999998877677778899999999999999999999987543 4678
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
+||||+++++|.+++.+.. ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999997542 34899999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCcee--eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch---
Q 038707 470 MVDQTHL--TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL--- 544 (597)
Q Consensus 470 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 544 (597)
....... .....++..|+|||.+.+..++.++||||||++++||++|..|+...... +...+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 230 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE--------FMRMMGNDKQGQM 230 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh--------hhhhccccccccc
Confidence 4332221 11222345699999998888999999999999999999988765432111 1111111000
Q ss_pred -----hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 545 -----FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 545 -----~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
.+.+............+..+.+|+.+||+.+|++|||+.||+++|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 231 IVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred chHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0001100001112234567999999999999999999999999999874
No 75
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.6e-39 Score=348.74 Aligned_cols=252 Identities=25% Similarity=0.325 Sum_probs=207.3
Q ss_pred cCCccCCcccccCceEEEEEEec-C-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-D-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..|.+.+.||+|++|.||+|... + ++.||+|............+.+|+.+++.++||||+++++++.+.+..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 34899999999999999999864 3 678999987766666667888999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQ-IEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++|+|.+++++. ....++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999998753 23456899999999999999999999999 9999999999999999999999999998654322
Q ss_pred c-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 474 T-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 474 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..+...
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-------~~~~~~~~~~~------- 289 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-------IMQQVLYGKYD------- 289 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCCC-------
Confidence 2 12334568999999999999999999999999999999999999996532211 11111111110
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...+..+.+||.+||+.+|++||++.+++.
T Consensus 290 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 --PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112234456889999999999999999999875
No 76
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.3e-39 Score=320.22 Aligned_cols=255 Identities=24% Similarity=0.426 Sum_probs=207.7
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.+.|++.++||+|+||.||+|...+++.+|+|.+.... ...+++.+|+.++++++|+||+++++++ ..+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence 46789999999999999999998888999999876433 3456889999999999999999999986 456789999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ...+++.++..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 9999999987643 345899999999999999999999999 999999999999999999999999999766433222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||.+....++.++||||||++++||++ |+.||......+ ....+..+.. .
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 222 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-------VIQNLERGYR---------M 222 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHHcCCC---------C
Confidence 2233345678999999988889999999999999999999 999997543211 1111111110 1
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+.++.+++.+||..+|++||+++++++.|+.+
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 11223345799999999999999999999999999863
No 77
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.9e-39 Score=320.49 Aligned_cols=251 Identities=29% Similarity=0.458 Sum_probs=203.7
Q ss_pred CCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 318 NYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+|++.+.||+|+||.||++.+.++..+|+|..... .....++.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 47888999999999999999877778999987532 22345788999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++..... .+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..........
T Consensus 84 ~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 84 GCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 999999976432 5899999999999999999999999 99999999999999999999999999876543222222
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
....++..|+|||.+.+..++.++||||||+++|+|++ |+.||......+ ....+..+.. ...
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~~~ 222 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-------VVESVSAGYR---------LYR 222 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-------HHHHHHcCCc---------CCC
Confidence 22234567999999998899999999999999999999 899987543221 1111111100 011
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
+...+.++.+|+.+||..+|++|||+.|+++.|.
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1234567899999999999999999999999873
No 78
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8.4e-39 Score=319.31 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=205.5
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
++|++.+.||+|+||.||+|.+.+...||+|+..... ...+++.+|+.++++++||||+++++.+. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 5689999999999999999998776789999887432 23467899999999999999999999874 456799999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.+.. ...+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||.++.........
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 84 KGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999998642 234799999999999999999999999 9999999999999999999999999997654333222
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....++..|+|||++.+..++.++||||||+++|+|++ |+.||......+ ....+..+. ...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------~~~~~~~~~---------~~~ 223 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQVERGY---------RMP 223 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-------HHHHHhcCC---------CCC
Confidence 223346678999999988889999999999999999999 888886543221 111111110 001
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
.....+..+.+|+.+||+.+|++||++.++++.|+..
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1234556789999999999999999999999999875
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=348.03 Aligned_cols=261 Identities=23% Similarity=0.362 Sum_probs=216.8
Q ss_pred HHHhcCCccCCcccccCceEEEEEEecCC-cEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeE-EEeC----
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLTDG-RIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGC-CLET---- 385 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~---- 385 (597)
.....++++.+.|.+|||+.||+|.+..+ ..+|+|++...++...+.+++||.+|++|+ |+|||.+++. ....
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34456788889999999999999998765 999999998889999999999999999996 9999999993 3221
Q ss_pred --CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 386 --EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 386 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
-+.+|.||||.+|.|.|++....... |++.++++|+.++++|+++||... +||||||||-+||||..+++.||+||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcc
Confidence 25679999999999999999765544 999999999999999999999987 66999999999999999999999999
Q ss_pred cccccccCCCcee--------eecccccccccCcccc---ccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH
Q 038707 464 GTSRSVMVDQTHL--------TTKVQGTFGYVDPEYF---QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 532 (597)
Q Consensus 464 gl~~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~ 532 (597)
|.+.......... .....-|+.|.|||.+ .+...++|+|||+|||+||-|.....||.....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------- 263 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------- 263 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------
Confidence 9986543222110 0112258999999985 567899999999999999999999999964321
Q ss_pred HHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 533 GYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
..+++..+.......++..|.+||+.||+.||++||++-+|++++-+|+.
T Consensus 264 ------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 264 ------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 12333333344446788889999999999999999999999999988874
No 80
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.2e-39 Score=325.55 Aligned_cols=263 Identities=28% Similarity=0.436 Sum_probs=210.9
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEecC------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEE
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCL 383 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 383 (597)
++...++|++.+.||+|+||.||++.... ...+|+|..... ......++.+|+.++.++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 34445678899999999999999998642 367999987743 334556789999999999 7999999999999
Q ss_pred eCCcceEEEeccCCCChhhHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCe
Q 038707 384 ETEVPLLVYEFIPNGTLYQYIHNQI-------------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANI 450 (597)
Q Consensus 384 ~~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NI 450 (597)
+.+..+++|||+++++|.++++... ....+++..++.++.|++.||.|||+.+ |+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeE
Confidence 9999999999999999999997531 2346899999999999999999999999 99999999999
Q ss_pred EeCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCC
Q 038707 451 LLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDED 528 (597)
Q Consensus 451 ll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~ 528 (597)
|+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 242 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE- 242 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-
Confidence 9999999999999999865433221 1222335678999999988899999999999999999997 999986543222
Q ss_pred CcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 529 KSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
....+..+.. ...+...+..+.+|+.+||+.+|++|||+.|+++.|+++.
T Consensus 243 ------~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 ------LFKLLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ------HHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1122222111 1112233557889999999999999999999999999874
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.8e-39 Score=331.75 Aligned_cols=242 Identities=23% Similarity=0.336 Sum_probs=198.4
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
++||+|+||.||++... +++.||+|.+... .......+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999975 6899999987642 3345677889999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeee
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT 478 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~ 478 (597)
+|.+++.... .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~ 153 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMK 153 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccc
Confidence 9999987542 4899999999999999999999999 9999999999999999999999999987543221 2233
Q ss_pred cccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhH
Q 038707 479 KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKK 558 (597)
Q Consensus 479 ~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 558 (597)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||...+..+ ....+..... ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~-------~~~~~~~~~~----------~~p~ 216 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-------LFELILMEDI----------KFPR 216 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH-------HHHHhccCCc----------cCCC
Confidence 4568999999999998899999999999999999999999996533211 1111111100 1122
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 559 EEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 559 ~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
..+.++.+|+.+||+.||++|| ++.++++.
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 3445688999999999999997 88988764
No 82
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.2e-39 Score=331.99 Aligned_cols=261 Identities=29% Similarity=0.477 Sum_probs=207.3
Q ss_pred hcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeC-C
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQI-NHRNIVKLLGCCLET-E 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 386 (597)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357999999999999999999742 24789999876432 33456788999999999 799999999988754 4
Q ss_pred cceEEEeccCCCChhhHHhhcCC---------------------------------------------------------
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIE--------------------------------------------------------- 409 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 409 (597)
..+++|||+++++|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 67899999999999999865321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee-eeccccccccc
Q 038707 410 -EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL-TTKVQGTFGYV 487 (597)
Q Consensus 410 -~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~ 487 (597)
..++++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 125899999999999999999999998 9999999999999999999999999998764332221 22334567899
Q ss_pred CccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHH
Q 038707 488 DPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVAT 566 (597)
Q Consensus 488 aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 566 (597)
|||++.+..++.++||||||++|+||++ |..||......+ .+...+..+... ..+...++++.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~ 307 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRM---------RAPEYATPEIYS 307 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCC---------CCCccCCHHHHH
Confidence 9999999999999999999999999998 999997543222 112222222111 112233467889
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 567 LAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 567 li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
++.+||+.+|++||++.||+++|+++..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
No 83
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7e-39 Score=323.56 Aligned_cols=256 Identities=25% Similarity=0.464 Sum_probs=206.2
Q ss_pred cCCccCCcccccCceEEEEEEe-----cCCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGML-----TDGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
..|++.+.||+|+||+||+|.+ ..+..+++|.+.. ........+.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4578889999999999999985 2457899998874 334445788999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC
Q 038707 391 VYEFIPNGTLYQYIHNQIE--------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY 456 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~ 456 (597)
||||+++++|.+++..... ...+++.+++.++.|++.||.|||+.+ ++|+||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 9999999999999964321 234789999999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHH
Q 038707 457 RAKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGY 534 (597)
Q Consensus 457 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~ 534 (597)
.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE------- 234 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999976543222 12223335678999999988889999999999999999998 999986533211
Q ss_pred HHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 535 FLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
....+...... ..+...+..+.+++.+||+.+|.+||++.+|+++|+.
T Consensus 235 ~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMVRKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22222222211 1122345678899999999999999999999999875
No 84
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.2e-39 Score=331.49 Aligned_cols=241 Identities=25% Similarity=0.343 Sum_probs=197.6
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||.||++... +|+.||+|.+... .......+.+|+.++++++||||+++++++.+.+..+|||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 3345567889999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeee
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT 478 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~ 478 (597)
+|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ....
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~ 153 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMK 153 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cccc
Confidence 9999887542 4899999999999999999999999 9999999999999999999999999987543222 2223
Q ss_pred cccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhH
Q 038707 479 KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKK 558 (597)
Q Consensus 479 ~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 558 (597)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+ .. ..+..... ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~-~~~~~~~~----------~~p~ 216 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LF-ELILMEEI----------RFPR 216 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH------HH-HHHhcCCC----------CCCC
Confidence 4568999999999998999999999999999999999999996533221 11 11111110 1122
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 559 EEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 559 ~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..++++.+|+.+||+.||++|| ++.++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 3456688999999999999998 7888875
No 85
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.7e-39 Score=324.95 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=205.1
Q ss_pred cCCccCCcccccCceEEEEEEecC-C--cEEEEEEccc-cChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-G--RIVAVKKSKL-VDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 391 (597)
++|++.+.||+|+||.||+|..++ + ..+++|.++. ......+.+.+|+.+++++ +||||+++++++.+....+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468899999999999999999753 3 3578888774 3344567899999999999 799999999999999999999
Q ss_pred EeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 392 YEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
+||+++++|.++++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 999999999999976321 124889999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQ 537 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~ 537 (597)
||+|||++...... ........+..|+|||++....++.++||||||+++|||++ |..||......+ ...
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------LYE 229 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHH
Confidence 99999998643211 11111223457999999988889999999999999999997 999996543221 111
Q ss_pred HHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 538 AINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+..+ .....+...+..+.+|+.+||+.+|.+||++.+++++|+.+..
T Consensus 230 ~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 230 KLPQG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 1111122345678899999999999999999999999988765
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=332.99 Aligned_cols=246 Identities=26% Similarity=0.333 Sum_probs=202.1
Q ss_pred hcCCccCCcccccCceEEEEEEecC--CcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD--GRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.++|++.+.||+|+||.||+|.+.. +..||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3569999999999999999998653 368999987532 33456678899999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999998643 4899999999999999999999999 9999999999999999999999999997653
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+... ....+..+..
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------~~~~i~~~~~------ 245 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-------IYQKILEGII------ 245 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-------HHHHHhcCCC------
Confidence 22 223468999999999998889999999999999999999999997533211 1112222111
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
..+...+..+.+++.+||+.+|++|+ +++++++.
T Consensus 246 ----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 ----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 01122345578999999999999995 88888764
No 87
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.7e-38 Score=369.61 Aligned_cols=265 Identities=27% Similarity=0.443 Sum_probs=210.2
Q ss_pred HHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+.....+...++||+|+||.||+|... +++.||||++...... ...|++.+++++|||||++++++.+.+..++|
T Consensus 686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEE
Confidence 333456778889999999999999974 7899999988643322 23468899999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++|+|.++++. ++|..+.+++.|+++||+|||....++|+||||||+||+++.++..++. |+.......
T Consensus 762 ~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 762 HEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 999999999999963 8899999999999999999996655559999999999999999888875 665543221
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
. ....+++.|||||++.+..++.++|||||||++|||++|+.||.... ........+.............+++.
T Consensus 835 ~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 835 D-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-GVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred C-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhcCccchhheeCcc
Confidence 1 12357899999999999999999999999999999999999995432 22334444444333333334444444
Q ss_pred hhh--hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 552 VLK--EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 552 ~~~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
+.. ....+...++.+++.+||+.+|++||||+||+++|+++.+
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 322 2234556678899999999999999999999999998865
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.7e-39 Score=330.90 Aligned_cols=263 Identities=27% Similarity=0.409 Sum_probs=203.6
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.++|++.+.||+|+||.||++.+. ++..+|+|.+... .....+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999976 5888999987653 33455779999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
|+++++|.+++.... .+++..+..++.|++.||.|||+. + |+|+||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999997642 488999999999999999999975 5 999999999999999999999999998755322
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH-------------------
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG------------------- 533 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~------------------- 533 (597)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||......+......
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 1233468999999999998889999999999999999999999997543211000000
Q ss_pred -HHHHHHh-----cCchhhhhhHHhhhhh----hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 534 -YFLQAIN-----ENRLFEALDARVLKEA----KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 534 -~~~~~~~-----~~~~~~~l~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....... ........+....... ....+.++.+|+.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000 0000011111000000 0113456899999999999999999999975
No 89
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.5e-39 Score=325.45 Aligned_cols=261 Identities=25% Similarity=0.377 Sum_probs=196.9
Q ss_pred cCCccCCcccccCceEEEEEEec--CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCccceeeeEEEe-----
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT--DGRIVAVKKSKLVD--ETNVEQFINEVVILSQI---NHRNIVKLLGCCLE----- 384 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 384 (597)
++|++.+.||+|+||+||+|... +++.||+|.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36899999999999999999863 46889999876432 22344566777777766 69999999999853
Q ss_pred CCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
....++||||++ ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346789999996 69999997643 234899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN-- 542 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~-- 542 (597)
+++..... .......|++.|+|||.+.+..++.++||||||+++|||++|++||......+ ............
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~ 230 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGE 230 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCCh
Confidence 99765432 22334558999999999988899999999999999999999999997644322 111111111000
Q ss_pred -chh-------hhhhH---HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 543 -RLF-------EALDA---RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 543 -~~~-------~~l~~---~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+. ..+.+ ..........++.+.+|+.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 00000 0000111234566789999999999999999999985
No 90
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.9e-39 Score=322.80 Aligned_cols=267 Identities=29% Similarity=0.443 Sum_probs=203.8
Q ss_pred CccCCcccccCceEEEEEEe-----cCCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceE
Q 038707 319 YNANRILGQGGQGTVYKGML-----TDGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLL 390 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 390 (597)
|++.+.||+|+||+||++.. .+++.||+|...... ......+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988653 257789999876533 33567789999999999999999999988764 35789
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
+|||+++++|.+++... .+++.+++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 99999999999999754 3899999999999999999999999 9999999999999999999999999997654
Q ss_pred CCCce--eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTH--LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
..... ......++..|+|||.+.+..++.++||||||++++||++|..|+......-. ..............+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhh
Confidence 32221 11222356679999999888899999999999999999999999865332110 0000000000000111111
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
+.......+...+.++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111112334567999999999999999999999999999875
No 91
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-38 Score=318.17 Aligned_cols=255 Identities=26% Similarity=0.473 Sum_probs=204.3
Q ss_pred CccCCcccccCceEEEEEEecC----CcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc-----
Q 038707 319 YNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEV----- 387 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 387 (597)
|.+.+.||+|+||.||+|.+.. +..||+|+++.. ......++.+|+..++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 368999987743 34456789999999999999999999999876554
Q ss_pred -ceEEEeccCCCChhhHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 388 -PLLVYEFIPNGTLYQYIHNQI---EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 388 -~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
.++++||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 789999999999999986532 2235899999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 464 GTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 464 gl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
|+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-------~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-------IYDYLRH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHc
Confidence 9998664332221 112234678999999988899999999999999999999 889986533211 1122222
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
+... ..+...+..+.+++.+||+.||++||++.||++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2111 11233456789999999999999999999999999876
No 92
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-38 Score=322.83 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=207.1
Q ss_pred CCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
+|++.+.||+|+||.||+|... ....+++|...... .....++.+|+.+++.++||||+++++.+.+.+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4788899999999999999853 23578888876433 3456789999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCC
Q 038707 391 VYEFIPNGTLYQYIHNQI---------------------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSAN 449 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~N 449 (597)
++||+++++|.+++.... ...++++..++.++.|++.||.|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999987531 1135889999999999999999999999 9999999999
Q ss_pred eEeCCCCcEEEeeccccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcC
Q 038707 450 ILLDDKYRAKVSDFGTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDE 527 (597)
Q Consensus 450 Ill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~ 527 (597)
||+++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||++++||++ |..||......+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999997654332211 222335678999999988889999999999999999998 999986543221
Q ss_pred CCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 528 DKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
......... ....+...+.++.+++.+||+.+|++||++.++++.|+++-.
T Consensus 238 -------~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 -------LFNLLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -------HHHHHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 112221111 111123344678899999999999999999999999998754
No 93
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-38 Score=314.50 Aligned_cols=247 Identities=28% Similarity=0.462 Sum_probs=201.1
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChh
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
++||+|+||.||+|...++..+|+|...... ......+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4799999999999998888999999876543 334557899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeeccc
Q 038707 402 QYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQ 481 (597)
Q Consensus 402 ~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 481 (597)
+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++...............
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 9987543 34889999999999999999999999 999999999999999999999999998754322222222233
Q ss_pred ccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 482 GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 482 gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
++..|+|||++....++.++||||||+++|+|++ |..||......+ ....+..+.. .......
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~~~~~~~ 219 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKGYR---------MSCPQKC 219 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCCC---------CCCCCCC
Confidence 4678999999998889999999999999999998 999996543221 1111111110 1112234
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 561 IMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
+..+.+|+.+||+.+|++||++.+++++|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 567899999999999999999999999986
No 94
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-38 Score=316.11 Aligned_cols=248 Identities=28% Similarity=0.445 Sum_probs=199.0
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
+.||+|+||.||+|.+. +++.+|+|.... ........+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 47999999999999975 689999998654 3344567899999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee-ec
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT-TK 479 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~-~~ 479 (597)
.+++.... ..+++..++.++.|+++||.|||+.+ |+|+||||+|||++.++.+||+|||++........... ..
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEG--PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 99997532 34899999999999999999999999 99999999999999999999999999875432211111 11
Q ss_pred ccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhH
Q 038707 480 VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKK 558 (597)
Q Consensus 480 ~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 558 (597)
...+..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+... .......
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~~~~---------~~~~~~~ 219 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAIEQG---------VRLPCPE 219 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHHHcC---------CCCCCcc
Confidence 123457999999998889999999999999999998 888886433211 11111111 0111122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 559 EEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 559 ~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..+..+.+|+.+||+.+|++|||+.+|+++|+.
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 345678999999999999999999999999863
No 95
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-39 Score=308.76 Aligned_cols=261 Identities=22% Similarity=0.281 Sum_probs=205.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhh--HHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETN--VEQFINEVVILSQINHRNIVKLLGCCLET--EVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 391 (597)
++|+.++.|++|.||.||+|+++ +++.||+|+++...+.. .-..++||.+|.+.+|||||.+-.+.... +..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45778889999999999999986 68999999988754332 23468999999999999999999988754 478999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||++. +|..+++... .++...++.-++.|+++||+|||.+. |+|||||++|+|+...|.+||+|||+|+.+..
T Consensus 156 Me~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999965 8999998754 45899999999999999999999999 99999999999999999999999999998865
Q ss_pred CCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh---cCchhhh
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN---ENRLFEA 547 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 547 (597)
+. ...+...-|..|.|||++.+ ..|+.+.|+||+|||+.||+++++-|.+...-++ +...| ..+. +..+..+
T Consensus 230 p~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ--l~~If-~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 230 PL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ--LDKIF-KLLGTPSEAIWPGY 305 (419)
T ss_pred Cc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH--HHHHH-HHhCCCccccCCCc
Confidence 43 34566678999999999876 5799999999999999999999999887553332 21111 1111 1111000
Q ss_pred --h------------hHHhhhhhhHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 --L------------DARVLKEAKKE-EIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 --l------------~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+ ...+...+... ..+.-.+|+..+|..||.+|.|++|.|+
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 00111111111 3466789999999999999999999875
No 96
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-38 Score=325.18 Aligned_cols=263 Identities=24% Similarity=0.368 Sum_probs=199.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.++|++.+.||+|+||+||+|... +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999976 689999998765332 234567899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|++ ++|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 68888887542 34889999999999999999999999 9999999999999999999999999987543221
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc---h---h-
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR---L---F- 545 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~---~- 545 (597)
.......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||....... .............. + .
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccchhh
Confidence 12233457899999999865 458899999999999999999999997643211 11111111000000 0 0
Q ss_pred -hhhhHH---------hhhh-hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 546 -EALDAR---------VLKE-AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 546 -~~l~~~---------~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+. +... .....+..+.+|+.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 0000 00012356789999999999999999999986
No 97
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.9e-39 Score=336.66 Aligned_cols=252 Identities=25% Similarity=0.329 Sum_probs=205.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|.+.+.||+|+||+||++... +++.||||++... .......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999976 6899999987642 2245567899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999865 34899999999999999999999999 999999999999999999999999999765433
Q ss_pred C----------------------------ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCC
Q 038707 473 Q----------------------------THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 524 (597)
Q Consensus 473 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~ 524 (597)
. ........||+.|+|||++.+..++.++||||||++||||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 112233468999999999999999999999999999999999999997544
Q ss_pred CcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 038707 525 TDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT-MKEVTNE 588 (597)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~evl~~ 588 (597)
..+ .......... ..........++.+.+||.+||+ +|.+||+ ++++++.
T Consensus 235 ~~~------~~~~i~~~~~-------~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQE------TYNKIINWKE-------SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHH------HHHHHhccCC-------cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 211 1111111000 00000011145678899999997 9999999 9999874
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.5e-39 Score=331.10 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=200.6
Q ss_pred CCccCCcccccCceEEEEEEec----CCcEEEEEEcccc----ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT----DGRIVAVKKSKLV----DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
+|++.+.||+|+||.||++... +++.||+|.+... .....+.+..|+.++..+ +|+||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788999999999999998852 5789999987532 223456788999999999 499999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999997543 4899999999999999999999999 99999999999999999999999999976
Q ss_pred ccCCCceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 469 VMVDQTHLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 469 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.............||+.|+|||++.+. .++.++||||||+++|||++|+.||......... ..+...+...
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~~~~----- 226 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ---SEVSRRILKC----- 226 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH---HHHHHHHhcC-----
Confidence 544333333445699999999998765 4789999999999999999999999754322211 1111111110
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
++ ..+...+..+.+|+.+||+.||++|| +++++++
T Consensus 227 -~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 -DP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -CC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 00 11223455688999999999999999 6777765
No 99
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.2e-39 Score=336.18 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=203.3
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
..++|++.+.||+|+||.||++... +++.+|+|.+.. ......+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467999999999999999999976 588999998753 223344567899999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999999753 3888999999999999999999999 9999999999999999999999999997654
Q ss_pred CCCceeeecccccccccCccccccC----CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSS----QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
...........||+.|+|||++.+. .++.++||||||++||||++|+.||...... ..+...........
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~~~ 267 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMDHKNSLT 267 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHHHHHHcCCCcCC
Confidence 3322223345699999999998653 4789999999999999999999999753321 11111111100000
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKM--RPTMKEVTNE 588 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~evl~~ 588 (597)
.......+.++.+||.+||+.+|.+ ||+++++++.
T Consensus 268 -------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 -------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0011134567889999999999988 9999999764
No 100
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-38 Score=315.99 Aligned_cols=260 Identities=27% Similarity=0.410 Sum_probs=212.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|++|.||+|... +++.+|+|..+. ......+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999987 789999997753 33444678999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
||+++++|.+++.... ....+++.+++.++.|+++||.|||+.+ |+|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999997532 2345899999999999999999999999 99999999999999999999999999876543
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... +... ....+..+....
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~-~~~~~~~~~~~~----- 227 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYS-LCKKIEKCDYPP----- 227 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHH-HHhhhhcCCCCC-----
Confidence 221 12234578899999999888899999999999999999999999864321 1111 111111111110
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
......+..+.++|.+||..+|++|||+.+|+++|++++
T Consensus 228 ---~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 ---LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 011244567889999999999999999999999999886
No 101
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.3e-39 Score=332.92 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=198.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cce
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VPL 389 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 389 (597)
+|++.+.||+|+||.||+|... +++.||||++... ......++.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999975 6899999987642 2334567889999999999999999999886433 479
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
+||||++ ++|.+++.... .+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68999887543 4899999999999999999999999 999999999999999999999999999765
Q ss_pred cCCCc--eeeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH--------HHHH
Q 038707 470 MVDQT--HLTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG--------YFLQ 537 (597)
Q Consensus 470 ~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~--------~~~~ 537 (597)
..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||............. ....
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32221 12234568999999999865 678999999999999999999999997543211000000 0000
Q ss_pred HHhcCchhhhhhH---Hhhh---hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 538 AINENRLFEALDA---RVLK---EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 538 ~~~~~~~~~~l~~---~~~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+......+.+.. .... ......++.+.+++.+||+.||++|||++|+++.
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0111111111100 0000 0001234567899999999999999999999864
No 102
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-38 Score=320.70 Aligned_cols=256 Identities=27% Similarity=0.461 Sum_probs=207.5
Q ss_pred cCCccCCcccccCceEEEEEEec------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.+|...++||+|+||.||++... ++..+++|..........+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45778899999999999999742 356899998887777777899999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 391 VYEFIPNGTLYQYIHNQIE------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
+|||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999986432 124889999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~ 536 (597)
||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~ 234 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-------AI 234 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-------HH
Confidence 99999998765432221 1222335678999999998899999999999999999998 899986433221 11
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..+..+.. ...+...+..+.+|+.+||+.||.+||++.+|++.|+.
T Consensus 235 ~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 235 ECITQGRE---------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHcCcc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11111111 01112344568899999999999999999999999863
No 103
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.6e-38 Score=326.44 Aligned_cols=248 Identities=25% Similarity=0.412 Sum_probs=198.4
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||.||++... +++.||+|.++.. .......+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999976 6889999987642 233456688999999998 699999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTT 153 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC-Ccc
Confidence 9999988754 24999999999999999999999999 9999999999999999999999999987532211 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC--CCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE--DKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ ......+..+.+..... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------C
Confidence 34568999999999999999999999999999999999999997543322 11112222222222211 1
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCC------HHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPT------MKEVTN 587 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt------~~evl~ 587 (597)
.+...+..+.+|+.+||+.||.+||+ ++++++
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 12233456889999999999999997 566654
No 104
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.7e-38 Score=319.83 Aligned_cols=257 Identities=28% Similarity=0.420 Sum_probs=204.8
Q ss_pred hcCCccCCcccccCceEEEEEEecC------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 388 (597)
.++|.+.+.||+|++|.||+|.+.+ +..|++|...... ......+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678999999999999999999753 5688999876433 34456799999999999999999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC---cEEEe
Q 038707 389 LLVYEFIPNGTLYQYIHNQIE----EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY---RAKVS 461 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~ 461 (597)
++||||+++++|.+++..... ...+++..++.++.||+.||+|||+.+ ++|+||||+|||++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 999999999999999986532 125899999999999999999999999 99999999999998754 59999
Q ss_pred eccccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHH
Q 038707 462 DFGTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAI 539 (597)
Q Consensus 462 Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~ 539 (597)
|||+++......... ......+..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~ 234 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-------VMEFV 234 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHH
Confidence 999998653222111 112223567999999998899999999999999999997 999987543221 11111
Q ss_pred hcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 540 NENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 540 ~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..... ...+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 235 ~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 235 TGGGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 11110 11122345678899999999999999999999999863
No 105
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.3e-39 Score=331.93 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=204.0
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||+|.++.. .......+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999976 6899999987642 2334567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999998652 34899999999999999999999999 999999999999999999999999999876544
Q ss_pred CceeeecccccccccCccccc------cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQ------SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
.........||+.|+|||++. ...++.++||||||+++|||++|+.||......+ .+...........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~ 229 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQRFLK 229 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCCccC
Confidence 333334456899999999986 4567899999999999999999999997533211 1111111111100
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. ......+..+.+|+.+||+ +|.+|||+.++++
T Consensus 230 ~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 230 F-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred C-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 0011245568899999997 9999999999885
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.7e-38 Score=327.00 Aligned_cols=241 Identities=27% Similarity=0.382 Sum_probs=196.0
Q ss_pred CcccccCceEEEEEEec----CCcEEEEEEcccc----ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 323 RILGQGGQGTVYKGMLT----DGRIVAVKKSKLV----DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+.||+|+||.||++... .++.||+|.++.. .......+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 68999999999999853 5789999987642 223445678999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... .+.+..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 99999999997543 4788999999999999999999999 9999999999999999999999999987543222
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ....+..+..
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-------~~~~~~~~~~---------- 217 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-------TIDKILKGKL---------- 217 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC----------
Confidence 22233568999999999998889999999999999999999999997533211 1111111111
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..+...+..+.+||.+||+.+|++|| ++.++++
T Consensus 218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11223345688999999999999999 7888765
No 107
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.5e-38 Score=315.42 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=204.6
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
++|++.+.||+|++|.||++.+..+..+|+|...... ...+.+.+|+.++++++|+|++++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4688889999999999999998777789999876432 23467889999999999999999999875 456899999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.++++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++..........
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 84 KGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 999999997642 334899999999999999999999999 9999999999999999999999999997654332222
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....++..|+|||.+.+..++.++||||||+++|+|++ |+.||......+ ....+..+.. ..
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~---------~~ 223 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-------VLEQVERGYR---------MP 223 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCC---------CC
Confidence 223346678999999988889999999999999999999 899987543211 1111111110 01
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
.....+..+.+++.+||+.+|++||++++|++.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 123345678999999999999999999999999985
No 108
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-38 Score=325.37 Aligned_cols=261 Identities=27% Similarity=0.433 Sum_probs=209.1
Q ss_pred hcCCccCCcccccCceEEEEEEec--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeC
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT--------DGRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLET 385 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 385 (597)
.++|.+.+.||+|+||.||++... +...+|+|..... ......++.+|+.+++++ +||||+++++++.+.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357999999999999999999853 1346999988753 344567789999999999 799999999999999
Q ss_pred CcceEEEeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL 452 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll 452 (597)
+..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999986432 134899999999999999999999998 9999999999999
Q ss_pred CCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCc
Q 038707 453 DDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKS 530 (597)
Q Consensus 453 ~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~ 530 (597)
++++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....++
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~--- 250 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--- 250 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---
Confidence 99999999999998765322111 1112224568999999988889999999999999999998 888886433211
Q ss_pred HHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 531 LVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
+...+..+.. .+.+...+.++.+|+.+||+.+|.+|||+.+|++.|+++.+.
T Consensus 251 ----~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 251 ----LFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ----HHHHHHcCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1222222211 111233456788999999999999999999999999998764
No 109
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2e-38 Score=317.22 Aligned_cols=260 Identities=25% Similarity=0.372 Sum_probs=210.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|++|.||++... +++.++||.... .......++.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999964 789999997654 23345578899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
||+++++|.+++.... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987532 2345899999999999999999999999 99999999999999999999999999876543
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
... ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.....+. .. ....+.....
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~-~~~~~~~~~~------- 225 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----YS-LCKKIEQCDY------- 225 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH----HH-HhhhhhcCCC-------
Confidence 221 1223458889999999988889999999999999999999999986533211 11 1111111110
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
........+..+.+++.+||+.+|++|||+.+|++.++++-
T Consensus 226 -~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 -PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00111235567899999999999999999999999998864
No 110
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.7e-38 Score=317.09 Aligned_cols=255 Identities=26% Similarity=0.485 Sum_probs=201.3
Q ss_pred CccCCcccccCceEEEEEEecC-Cc--EEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC------Cc
Q 038707 319 YNANRILGQGGQGTVYKGMLTD-GR--IVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLET------EV 387 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~-~~--~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 387 (597)
+.+.+.||+|+||.||+|.+.. +. .+|+|..+.. .....+.+.+|+.+++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999764 33 6899987643 455677899999999999999999999987532 24
Q ss_pred ceEEEeccCCCChhhHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQI---EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
.+++|||+++|+|.+++.... ....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885321 2234899999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 465 TSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 465 l~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~~~~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-------IYDYLRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHcC
Confidence 998764332211 122235678999999999999999999999999999999 888986532211 12222222
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
.... .....+..+.++|.+||+.+|++|||+.++++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 2111 1123445688999999999999999999999999875
No 111
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.3e-39 Score=334.54 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=201.8
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
..++|++.+.||+|+||.||++... +++.+|+|.+.. ........+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467999999999999999999976 588999998753 223345568899999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999999753 3889999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCceeeecccccccccCccccccC----CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSS----QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
...........||+.|+|||++... .++.++||||||++||||++|+.||...... ..+...+.......
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~ 267 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV------GTYSKIMDHKNSLN 267 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCcccC
Confidence 3333233456699999999998654 3789999999999999999999999754321 11111111111000
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKM--RPTMKEVTNE 588 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~evl~~ 588 (597)
.......+..+.+++.+||+.++.+ ||++.|+++.
T Consensus 268 -------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 -------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0111234566788999999755543 8899998875
No 112
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2e-38 Score=315.27 Aligned_cols=251 Identities=29% Similarity=0.470 Sum_probs=207.8
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.++|++.+.||+|++|.||++... ++.||+|....... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356888999999999999999875 78999999876544 5678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 99999999986532 35899999999999999999999999 99999999999999999999999999976532211
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
....+..|+|||.+....++.++||||||+++++|++ |..||......+ .......+. ..
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------~~ 218 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPHVEKGY---------RM 218 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhcCC---------CC
Confidence 2334668999999988889999999999999999997 999986443221 111111111 01
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
..+...++.+.+++.+||..+|++|||+++++++|+++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11223456788999999999999999999999999864
No 113
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3e-38 Score=314.32 Aligned_cols=245 Identities=30% Similarity=0.445 Sum_probs=198.3
Q ss_pred cccccCceEEEEEEec---CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 324 ILGQGGQGTVYKGMLT---DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
.||+|+||.||+|.++ ++..+|+|+++... ....+++.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 6899999999999753 47889999876432 345678999999999999999999999875 45678999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee-
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT- 477 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~- 477 (597)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999997542 4899999999999999999999999 99999999999999999999999999987644332211
Q ss_pred -ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 478 -TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 478 -~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
....++..|+|||.+....++.++||||||+++|||++ |+.||......+ ....+..+.. ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~i~~~~~---------~~ 218 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-------VTQMIESGER---------ME 218 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHCCCC---------CC
Confidence 12234578999999988889999999999999999998 999997543221 2222222211 11
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
.+...+.++.+||.+||+.||++||++.+|.+.|++
T Consensus 219 ~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 219 CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 123345678899999999999999999999999986
No 114
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.7e-38 Score=318.66 Aligned_cols=257 Identities=23% Similarity=0.443 Sum_probs=203.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR----IVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~----~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++|++.+.||+|+||+||+|.+. +++ .+++|...... .....++..|+..+++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 45778899999999999999974 344 47788765432 334567888999999999999999999875 455789
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
++||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||+++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 999999999999998643 34899999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
..... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~-- 231 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-------VPDLLEKGERLA-- 231 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCcCC--
Confidence 33221 2233446778999999988899999999999999999998 999987543221 112222221111
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
.+......+.+++.+||..+|++|||+.|+++.|..+...
T Consensus 232 -------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 232 -------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0111234578899999999999999999999999887643
No 115
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.9e-38 Score=323.68 Aligned_cols=257 Identities=27% Similarity=0.445 Sum_probs=203.9
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc--EEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR--IVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~--~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 391 (597)
++|++.+.||+|+||.||+|.++ ++. .+++|..+.. .......+.+|+.++.++ +|+||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56888999999999999999975 444 4678776642 344567889999999999 899999999999999999999
Q ss_pred EeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 392 YEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
|||+++++|.++++.... ...+++..++.++.||+.||+|||+.+ ++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999976421 235889999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQ 537 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~ 537 (597)
||+|||++....... .......+..|+|||.+.+..++.++||||||++++||++ |..||......+ ...
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYE 234 (303)
T ss_pred EeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-------HHH
Confidence 999999986432111 1111224567999999988889999999999999999998 999996543221 111
Q ss_pred HHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 538 AINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.+.... ....+...+..+.+|+.+||+.+|++||++.++++.|+++..
T Consensus 235 ~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 235 KLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHhcCC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111110 001112234568899999999999999999999999987653
No 116
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-38 Score=316.44 Aligned_cols=256 Identities=28% Similarity=0.475 Sum_probs=207.0
Q ss_pred hcCCccCCcccccCceEEEEEEec-CC---cEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DG---RIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~---~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.++|+..+.||+|+||.||+|.+. ++ ..+++|..... .....+++.+|++++++++|+||+++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356888899999999999999975 33 37999987654 34456789999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999997643 34899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCCceeee--cccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 471 VDQTHLTT--KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 471 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
........ ....+..|+|||++....++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-------~~~~i~~~~~--- 228 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-------VMKAINDGFR--- 228 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhcCCC---
Confidence 32222111 1223457999999988889999999999999999997 999996533211 2222222110
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
.......+.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 ------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111223456789999999999999999999999999876
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-38 Score=325.23 Aligned_cols=243 Identities=27% Similarity=0.416 Sum_probs=194.6
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||+||++... +++.+|+|.++.. .......+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5889999987642 334456788899988877 799999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTT 153 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccc
Confidence 9999988754 24899999999999999999999999 9999999999999999999999999987543221 122
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC--CCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE--DKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......+....+..... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~ 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------C
Confidence 34568999999999999999999999999999999999999996433221 11112222222222111 1
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
.+...+..+.+|+.+||+.||++||++
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 123345568899999999999999984
No 118
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9e-39 Score=334.79 Aligned_cols=251 Identities=26% Similarity=0.367 Sum_probs=200.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||||++... .......+.+|+.++..++||||+++++++.+.+..+|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999976 6899999987642 2344567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997643 4899999999999999999999999 999999999999999999999999998754321
Q ss_pred Cce-------------------------------------eeecccccccccCccccccCCCCcccceeehHHHHHHHHh
Q 038707 473 QTH-------------------------------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT 515 (597)
Q Consensus 473 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~ 515 (597)
... ......||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 100 0112358999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 038707 516 GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT---MKEVTN 587 (597)
Q Consensus 516 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~evl~ 587 (597)
|..||......+ ............. .......++.+.+||.+|+. +|.+|++ ++++++
T Consensus 235 G~~Pf~~~~~~~------~~~~i~~~~~~~~-------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQE------TYRKIINWKETLQ-------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHH------HHHHHHcCCCccC-------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999997543221 1111111000000 00011234567899999996 9999998 888876
No 119
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.6e-38 Score=334.92 Aligned_cols=265 Identities=26% Similarity=0.428 Sum_probs=210.0
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCccceeeeEE
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQIN-HRNIVKLLGCC 382 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 382 (597)
+.+...++|.+.+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|+.+|.++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 34455567888999999999999999863 24689999987532 333567899999999997 99999999999
Q ss_pred EeCCcceEEEeccCCCChhhHHhhcCC-----------------------------------------------------
Q 038707 383 LETEVPLLVYEFIPNGTLYQYIHNQIE----------------------------------------------------- 409 (597)
Q Consensus 383 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------- 409 (597)
...+..++||||+++|+|.+++++...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999975321
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCC
Q 038707 410 ------------------------------------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKS 447 (597)
Q Consensus 410 ------------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~ 447 (597)
...+++..++.++.||+.||.|||+.+ ++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 123678889999999999999999998 99999999
Q ss_pred CCeEeCCCCcEEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCC
Q 038707 448 ANILLDDKYRAKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINT 525 (597)
Q Consensus 448 ~NIll~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~ 525 (597)
+|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999976532221 11222346788999999998889999999999999999998 8899865432
Q ss_pred cCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 526 DEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
.+ .....+..+.. ...+...+.++.+|+.+||+.+|.+||++++|++.|+++-
T Consensus 348 ~~------~~~~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NE------QFYNAIKRGYR---------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hH------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 21 11111111110 0112233567899999999999999999999999999874
No 120
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-38 Score=317.29 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=208.9
Q ss_pred HhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..++|.+.+.||+|++|.||+|..++++.+|||.+.... ...+++.+|+.++++++|+||+++++++.+....++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 346799999999999999999998888889999877432 3457799999999999999999999999998999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 83 ~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999998643 235899999999999999999999999 99999999999999999999999999876543222
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
........+..|+|||.+.+..++.++||||||+++++|++ |+.||....... ....+..+. .
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~~~---------~ 222 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-------VLEQVERGY---------R 222 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCC---------C
Confidence 22222334568999999998889999999999999999998 999986533211 111111110 0
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
...+...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01112235678999999999999999999999999986
No 121
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.9e-38 Score=314.98 Aligned_cols=255 Identities=24% Similarity=0.422 Sum_probs=208.0
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.++|++.+.||+|+||.||++.+.++..+++|..... ....+.+.+|+.++++++|+||+++++.+.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678999999999999999999877888999987643 3345789999999999999999999999887 7789999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 83 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 9999999997643 335889999999999999999999998 999999999999999999999999999765433222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||++....++.++|+||||+++++|++ |+.||......+ ....+..+...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALERGYRM--------- 222 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCCC---------
Confidence 2223345678999999988889999999999999999998 999986533211 11222221111
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+.++.+++.+||+.+|++||++.++++.|+.+
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 11223455688999999999999999999999999864
No 122
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=332.21 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=195.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
.+|+..+.||+|+||+||++.+. +++.||||.+... .......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34566789999999999999976 6899999987643 334457789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+.. ...+..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 9999986532 2567788899999999999999999 9999999999999999999999999997654222
Q ss_pred eeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
.......||..|+|||++.. ...+.++||||||+++|||++|+.||......+. .. ....+...
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~-~~~~~~~~------- 291 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW---AS-LMCAICMS------- 291 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH---HH-HHHHHhcc-------
Confidence 12234568999999998743 2345689999999999999999999974322221 10 00111000
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.........+.++.+||.+||+.||++|||+.|+++.
T Consensus 292 --~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 --QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred --CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011123345678999999999999999999999874
No 123
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.2e-39 Score=329.34 Aligned_cols=242 Identities=23% Similarity=0.332 Sum_probs=197.2
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||.||++... +++.||+|.+... .......+.+|++++..++||||+++++++.+.+..+|||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 2344567889999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
+|.+++.... .+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++....... ..
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~ 153 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TM 153 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-cc
Confidence 9999887542 48999999999999999999997 67 99999999999999999999999999875432221 22
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||.....++ ....+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~-------~~~~i~~~~~----------~~p 216 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-------LFELILMEEI----------RFP 216 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH-------HHHHHhcCCC----------CCC
Confidence 34568999999999998999999999999999999999999996533221 1111111110 112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
...+.++.+|+.+||+.||++|+ ++.++++.
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 23345688999999999999996 89998754
No 124
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3e-38 Score=322.06 Aligned_cols=259 Identities=28% Similarity=0.447 Sum_probs=208.4
Q ss_pred HhcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCC
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQI-NHRNIVKLLGCCLETE 386 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 386 (597)
..++|.+.+.||+|+||.||++... .+..+|+|..+... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3467999999999999999999742 24579999876543 34457799999999999 7999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..+++|||+++++|.++++.... ..+++.++..++.|++.||.|||+.+ |+|+||||+|||+++++.+||+|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999976432 23899999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCch
Q 038707 467 RSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRL 544 (597)
Q Consensus 467 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (597)
+........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ .+......+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------~~~~~~~~~~- 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------KFYKLIKEGY- 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH------HHHHHHHcCC-
Confidence 866433221 1222345678999999998899999999999999999998 999987543221 1111111111
Q ss_pred hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 545 FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 545 ~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
........++++.+|+.+||..+|++|||+.|+++.|+++
T Consensus 262 --------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 --------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0011122345789999999999999999999999999875
No 125
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.5e-39 Score=346.59 Aligned_cols=259 Identities=27% Similarity=0.354 Sum_probs=208.3
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETE- 386 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 386 (597)
+.....++|.+.+.||+|+||+||++... +++.||||.+.. ........+.+|+..+..++|+||++++..+...+
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 33445679999999999999999999865 689999998754 34556677899999999999999999988775433
Q ss_pred -------cceEEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 387 -------VPLLVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 387 -------~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
..++||||+++|+|.++++... ...++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCE
Confidence 3579999999999999997643 2346899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 537 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 537 (597)
||+|||+++....... .......||+.|+|||++.+..++.++||||||++||||++|+.||......+ ...
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~-------~~~ 255 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE-------VMH 255 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHH
Confidence 9999999976543221 22334568999999999999999999999999999999999999996532211 111
Q ss_pred HHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 538 AINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+.. ...+...++++.+|+.+||+.+|.+||++.++++.
T Consensus 256 ~~~~~~~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 KTLAGRY---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHhcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111 11123345678999999999999999999999864
No 126
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.2e-38 Score=333.72 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=198.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.|++.+.||+|+||+||+|... +++.||||++... .......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999975 5889999987642 33456678999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++|+|.+++.+.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999997643 4889999999999999999999999 9999999999999999999999999975331100
Q ss_pred c----------------------------------------------eeeecccccccccCccccccCCCCcccceeehH
Q 038707 474 T----------------------------------------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFG 507 (597)
Q Consensus 474 ~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG 507 (597)
. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 001234699999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhc--ccCCCCCCCHHHH
Q 038707 508 VVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCL--NLNGKMRPTMKEV 585 (597)
Q Consensus 508 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl--~~~p~~RPt~~ev 585 (597)
|++|||++|+.||......+. ....+..... .........+.++.+||.+|+ ..++..||++.++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~------~~~i~~~~~~-------~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTET------QLKVINWENT-------LHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHH------HHHHHccccc-------cCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 999999999999976432221 1111110000 000011123456788998854 5566669999999
Q ss_pred HHH
Q 038707 586 TNE 588 (597)
Q Consensus 586 l~~ 588 (597)
++.
T Consensus 303 l~h 305 (381)
T cd05626 303 KAH 305 (381)
T ss_pred hcC
Confidence 864
No 127
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-38 Score=321.19 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=205.2
Q ss_pred CCccCCcccccCceEEEEEEecC------CcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 318 NYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.|++.+.||+|+||.||+|...+ +..||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 46777899999999999998642 47899999875433 335678899999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 391 VYEFIPNGTLYQYIHNQI-------------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
++||+++++|.+++.... ....+++..++.++.|++.||.|||+++ |+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 999999999999986321 1234888999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHH
Q 038707 458 AKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 458 ~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~ 535 (597)
+||+|||+++....... .......+++.|+|||.+....++.++||||||+++|||++ |..||......+ .
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~ 235 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-------V 235 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-------H
Confidence 99999999876543222 12223345778999999988889999999999999999998 888886543221 2
Q ss_pred HHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 536 LQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
...+..+... ..+...+..+.+|+.+||+.+|.+||++++|+..|+.
T Consensus 236 ~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEMIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 2222222211 1123455678899999999999999999999999975
No 128
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.9e-38 Score=315.80 Aligned_cols=258 Identities=29% Similarity=0.460 Sum_probs=208.4
Q ss_pred hcCCccCCcccccCceEEEEEEecC----CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.++|.+.+.||+|+||.||+|.+.+ ...|+||...... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3458888999999999999998643 2468999876544 5566789999999999999999999998875 55789
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++++|.+++..... .+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 84 VMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999976432 4899999999999999999999999 9999999999999999999999999987665
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
...........++..|+|||.+....++.++||||||++++||++ |..||......+ ....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~~~---- 227 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-------VIGRIENGERL---- 227 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-------HHHHHHcCCcC----
Confidence 443222333345568999999988889999999999999999996 999997543221 11111111110
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
..+...+..+.+++.+||..+|++|||+.++++.|++++..
T Consensus 228 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11233456789999999999999999999999999998764
No 129
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-38 Score=322.52 Aligned_cols=262 Identities=27% Similarity=0.442 Sum_probs=210.2
Q ss_pred HhcCCccCCcccccCceEEEEEEec--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT--------DGRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLE 384 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 384 (597)
..++|.+.+.||+|+||.||++... ++..||+|..... ......++.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3567889999999999999999741 2457999987643 344567899999999999 89999999999999
Q ss_pred CCcceEEEeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeE
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANIL 451 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIl 451 (597)
....++||||+++++|.+++..... ...+++..++.++.||++||.|||+++ |+||||||+|||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence 9999999999999999999986421 235788999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCC
Q 038707 452 LDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDK 529 (597)
Q Consensus 452 l~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~ 529 (597)
+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|+|++ |..||......+
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-- 247 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 247 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--
Confidence 999999999999999866432222 1222345678999999988889999999999999999998 788886443221
Q ss_pred cHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 530 SLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
....+..+... ......+..+.+|+.+||+.+|++||++.|+++.|+++.+.
T Consensus 248 -----~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 248 -----LFKLLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -----HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 12222222111 11223456788999999999999999999999999988653
No 130
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.4e-38 Score=314.94 Aligned_cols=255 Identities=26% Similarity=0.429 Sum_probs=206.8
Q ss_pred cCCccCCcccccCceEEEEEEec-C---CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-D---GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~---~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
.+|++.+.||+|+||.||+|.+. + +..+|+|.++... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999864 2 3479999876432 34467899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++++|.+++.... ..+++.+++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997643 34899999999999999999999999 99999999999999999999999999987654
Q ss_pred CCceeee--cccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 472 DQTHLTT--KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 472 ~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
....... ...++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ ....+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~~---- 227 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-------VIKAIEEGYR---- 227 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-------HHHHHhCCCc----
Confidence 3322221 1223568999999998899999999999999999887 999987543221 1112221110
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
.......+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011123456788999999999999999999999999875
No 131
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-38 Score=326.69 Aligned_cols=244 Identities=25% Similarity=0.372 Sum_probs=195.4
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHH---hhcCCCccceeeeEEEeCCcceEE
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVIL---SQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
|++.+.||+|+||.||++... +++.||||.++.. .....+.+.+|+.++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999976 6899999987642 233445677776655 566899999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++++|..+++.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888642 4899999999999999999999999 99999999999999999999999999875432
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ....+..+..
T Consensus 154 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~~~------- 218 (324)
T cd05589 154 FG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-------VFDSIVNDEV------- 218 (324)
T ss_pred CC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC-------
Confidence 21 22334568999999999999999999999999999999999999997543221 1111111111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..+...+..+.++|.+||+.||.+|| ++.++++
T Consensus 219 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ---RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11223456688999999999999999 4666654
No 132
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.4e-38 Score=313.18 Aligned_cols=247 Identities=27% Similarity=0.439 Sum_probs=197.8
Q ss_pred cccccCceEEEEEEec---CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCC
Q 038707 324 ILGQGGQGTVYKGMLT---DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGT 399 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 399 (597)
.||+|+||.||+|.+. .+..||+|...... ....+.+.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999864 35679999887543 334567999999999999999999999875 457899999999999
Q ss_pred hhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee--
Q 038707 400 LYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT-- 477 (597)
Q Consensus 400 L~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~-- 477 (597)
|.+++.... ..+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.+||+|||++...........
T Consensus 81 L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 81 LNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 999997532 35899999999999999999999999 99999999999999999999999999976543322211
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
....++..|+|||.+....++.++||||||+++|||++ |+.||......+ +...+..+.. ...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~~~ 219 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-------VMSFIEQGKR---------LDC 219 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCCC---------CCC
Confidence 11223578999999988889999999999999999996 999997543221 1122222111 112
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
+...++++.+++.+||+.+|++||++.+|++.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 233456788999999999999999999999999864
No 133
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-38 Score=310.18 Aligned_cols=268 Identities=23% Similarity=0.330 Sum_probs=207.9
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChh--hHHHHHHHHHHHhhcCCCc-cceeeeEEEeCC------
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDET--NVEQFINEVVILSQINHRN-IVKLLGCCLETE------ 386 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 386 (597)
..|...++||+|+||+||+|+.. +|+.||+|++....++ ......+|+.+|+.++|+| |++|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 44666778999999999999975 6899999998875443 4456789999999999999 999999999877
Q ss_pred cceEEEeccCCCChhhHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEE-FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
.++||+||+ ..+|..++...... ..++...+..++.||+.||+|||+++ |+||||||+||||+++|.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 788999999 55999999876532 23777899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc---
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE--- 541 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 541 (597)
|+....+... .+..++|..|.|||++.+. .|+...||||+|||+.||++++.-|.+....+ ........+..
T Consensus 167 Ara~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~---ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 167 ARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID---QLFRIFRLLGTPNE 242 (323)
T ss_pred HHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH---HHHHHHHHcCCCCc
Confidence 9966533322 4556689999999998875 79999999999999999999999998765422 11111111111
Q ss_pred Cchhhhh-------------hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhh
Q 038707 542 NRLFEAL-------------DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE--LGGI 592 (597)
Q Consensus 542 ~~~~~~l-------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~--L~~l 592 (597)
..+.... .+...............+++.+||+.+|.+|.|++.++++ +..+
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1111000 0111111111122468899999999999999999999986 5544
No 134
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-39 Score=327.47 Aligned_cols=256 Identities=29% Similarity=0.493 Sum_probs=218.7
Q ss_pred cCCccCCcccccCceEEEEEEecC---C--cEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD---G--RIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~---~--~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
....+.++||.|-||.||+|.+.+ | -.||||.-+. ...++.+.|+.|..+|++++||||++|+|++.+. ..||
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence 344556789999999999999643 3 3689998776 5566789999999999999999999999999765 5589
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|||.++-|.|.+||+.++. .|+......++.||..||+|||+.. ++||||..+|||+....-+||+|||+++.+.
T Consensus 468 vmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999999998654 4889999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
.+..+..+...-...|||||.+.-..++.++|||.|||.+||++. |..||.+....+... .+.
T Consensus 543 d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~----------------~iE 606 (974)
T KOG4257|consen 543 DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG----------------HIE 606 (974)
T ss_pred ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE----------------Eec
Confidence 766666665566789999999999999999999999999999998 999999876555211 111
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
..-....++.+++.|..|+.+||..+|.+||++.|+...|..++.
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 222233467788899999999999999999999999999988764
No 135
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.3e-38 Score=325.60 Aligned_cols=236 Identities=30% Similarity=0.431 Sum_probs=193.0
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||+||++... +++.||||.+... .....+.+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5889999987632 234556778899988877 699999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTT 153 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccc
Confidence 99999987643 4899999999999999999999999 9999999999999999999999999987543222 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+..+ ....+..+.. ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~~----------~~~ 216 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-------LFEAILNDEV----------VYP 216 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-------HHHHHhcCCC----------CCC
Confidence 34568999999999999999999999999999999999999997543221 1112211111 011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
...+.++.+|+.+||+.||.+||++
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 2234568899999999999999998
No 136
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.4e-38 Score=318.32 Aligned_cols=257 Identities=28% Similarity=0.466 Sum_probs=207.8
Q ss_pred hcCCccCCcccccCceEEEEEEecC------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 388 (597)
.++|++.+.||+|+||.||+|.... +..||+|...... ......+.+|+.+++.++||||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4578889999999999999998642 3689999976433 34456789999999999999999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEe
Q 038707 389 LLVYEFIPNGTLYQYIHNQIE-------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVS 461 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~ 461 (597)
++||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||+|||+++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 999999999999999976322 234788999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHH
Q 038707 462 DFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAI 539 (597)
Q Consensus 462 Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~ 539 (597)
|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~~~~~ 234 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-------VLKFV 234 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-------HHHHH
Confidence 99998765433221 2223346788999999988889999999999999999998 999986533222 11222
Q ss_pred hcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 540 NENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 540 ~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
..+.... .+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 IDGGHLD---------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred hcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 2221111 122235678999999999999999999999999863
No 137
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-38 Score=319.84 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=206.4
Q ss_pred HhcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEV 387 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 387 (597)
..++|++.+.||+|+||.||+|..+ .+..||+|...... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 24589999876433 2344568899999999999999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIE-------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+++ |+||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999976321 234678889999999999999999999 999999999999999999999
Q ss_pred eeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHH
Q 038707 461 SDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQA 538 (597)
Q Consensus 461 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~ 538 (597)
+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....++ ....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-------~~~~ 233 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-------VLKF 233 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHH
Confidence 999998765432221 1122234678999999998899999999999999999998 788886533221 1111
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
+..+... ..+...+..+.+++.+||+.+|++|||+.++++.|++..
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 234 VMDGGYL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111111 111223467999999999999999999999999998743
No 138
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.2e-38 Score=313.98 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=203.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-----hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-----ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++|++.+.||+|++|.||++... +++.+|+|...... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57899999999999999999975 68999999865422 2234678899999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|+||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999997642 4889999999999999999999999 9999999999999999999999999987654
Q ss_pred CCCceee--ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTHLT--TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
....... ....++..|+|||.+.+..++.++||||||+++|||++|+.||......+ .........
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~------ 223 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA------AIFKIATQP------ 223 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH------HHHHHhccC------
Confidence 3221111 23457889999999999889999999999999999999999986432111 111111110
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+...+..+.+++.+||..+|.+|||+.++++.
T Consensus 224 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 ---TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0111223345568899999999999999999999874
No 139
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.2e-38 Score=324.78 Aligned_cols=242 Identities=26% Similarity=0.373 Sum_probs=196.1
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||.||+|... +++.||||.+... .....+.+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999976 5789999987642 234456778899999876 799999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTT 153 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-ccc
Confidence 99999987543 4899999999999999999999999 9999999999999999999999999987543222 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..+.. ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-------~~~~i~~~~~----------~~p 216 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-------LFESILHDDV----------LYP 216 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC----------CCC
Confidence 34568999999999998899999999999999999999999997543221 1111111111 011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRP-------TMKEVTNE 588 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RP-------t~~evl~~ 588 (597)
...+.++.+|+.+||+.||++|| +++++++.
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 12345688999999999999999 77777643
No 140
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.5e-38 Score=334.63 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=198.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|.+.+.||+|+||+||++... +++.||||.+... .....+.+.+|++++++++||||+++++++.+.+..+|||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36889999999999999999975 6899999987532 2334567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999754 24889999999999999999999999 999999999999999999999999998633210
Q ss_pred Cce----------------------------------------------eeecccccccccCccccccCCCCcccceeeh
Q 038707 473 QTH----------------------------------------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSF 506 (597)
Q Consensus 473 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~Sl 506 (597)
... ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0012458999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCC---CCHH
Q 038707 507 GVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMR---PTMK 583 (597)
Q Consensus 507 G~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---Pt~~ 583 (597)
||+||||++|+.||......+ .+............ ......+.++.+||.+||+ +|.+| +++.
T Consensus 235 Gvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~-------p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHE------TYRKIINWRETLYF-------PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHH------HHHHHHccCCccCC-------CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 999999999999996533211 11111110000000 0011234568899999997 77765 5999
Q ss_pred HHHHH
Q 038707 584 EVTNE 588 (597)
Q Consensus 584 evl~~ 588 (597)
|+++.
T Consensus 301 ~~l~h 305 (377)
T cd05629 301 EIKSH 305 (377)
T ss_pred HHhcC
Confidence 98875
No 141
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.8e-38 Score=312.19 Aligned_cols=250 Identities=27% Similarity=0.442 Sum_probs=206.7
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|.+.+.||+|++|.||++... +++.|++|.+.. ........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778889999999999999976 689999998764 3455677899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.++++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999998752 345899999999999999999999998 99999999999999999999999999876543222
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......+++.|+|||++.+..++.++|+||||+++++|++|+.||......+ ....+..+.. .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 219 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-------LILKIIRGVF---------P 219 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCCC---------C
Confidence 2233457889999999998889999999999999999999999997543111 1111111111 1
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+..+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1122445678999999999999999999999864
No 142
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-38 Score=330.76 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=197.4
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||||.+... .......+.+|+.++.+++|+||+++++.+.+....+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46889999999999999999976 5899999987642 2334567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 999999999999864 34899999999999999999999999 999999999999999999999999998754311
Q ss_pred Cc----------------------------------eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCC
Q 038707 473 QT----------------------------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 518 (597)
Q Consensus 473 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~ 518 (597)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 00123469999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCC---CCCCHHHHHHH
Q 038707 519 PIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGK---MRPTMKEVTNE 588 (597)
Q Consensus 519 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~---~RPt~~evl~~ 588 (597)
||......+ .+ ..+......-.+.+ .....+++.+||.+++. +|. .||+++||++.
T Consensus 235 Pf~~~~~~~------~~-~~i~~~~~~~~~p~------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 235 PFCSETPQE------TY-KKVMNWKETLIFPP------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCHHH------HH-HHHHcCcCcccCCC------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 997543222 11 11111100000000 11133457778887664 344 46899999875
No 143
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.7e-38 Score=324.46 Aligned_cols=240 Identities=25% Similarity=0.377 Sum_probs=192.5
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||+|... +++.||+|.++.. .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5889999987642 233445566777777654 799999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~ 153 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKA 153 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccc
Confidence 99999997643 4899999999999999999999999 9999999999999999999999999997643322 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+ ....+.... ...+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-------~~~~i~~~~----------~~~~ 216 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-------LFDSILNDR----------PHFP 216 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC----------CCCC
Confidence 34568999999999998899999999999999999999999997543211 111111110 0112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMK-EVT 586 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~-evl 586 (597)
...+.++.+|+.+||+.+|++||++. +++
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 22345678999999999999999875 443
No 144
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7e-38 Score=322.96 Aligned_cols=243 Identities=26% Similarity=0.384 Sum_probs=197.1
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||++... +++.+|+|.++.. .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5789999987642 234456788999999988 699999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTT 153 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cce
Confidence 99999887542 4999999999999999999999999 9999999999999999999999999987532221 123
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||++||||++|+.||......+.........+.+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~p 223 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----------RIP 223 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----------CCC
Confidence 3456899999999999999999999999999999999999999765444333333333333222211 112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
...+..+.+++.+||+.||++||++
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 2334567899999999999999985
No 145
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.8e-38 Score=318.62 Aligned_cols=252 Identities=25% Similarity=0.342 Sum_probs=203.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
+|++.+.||+|+||+||++... +++.||+|++.... ......+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999975 68999999876422 2233567889999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999999887542 235899999999999999999999999 9999999999999999999999999997654222
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
. .....|++.|+|||++.+..++.++||||||+++|||++|+.||....... ....+...+... .
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~----------~ 221 (285)
T cd05605 157 T--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKED----------Q 221 (285)
T ss_pred c--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhhc----------c
Confidence 1 223468999999999988889999999999999999999999997543221 111111111110 0
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
.......+..+.+|+.+||+.||++|| +++++++.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 111233556788999999999999999 78888653
No 146
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=325.56 Aligned_cols=263 Identities=24% Similarity=0.357 Sum_probs=216.0
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhh-HHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETN-VEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
+...+.++||+|-||+|.+.....+..||+|+++...... ..+|.+|+++|.+|+||||++|+|+|..++.+.+|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 4456678999999999999999888999999998755544 589999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++|+|.+|+.++.... +.......|+.||+.||+||.+.+ ++||||.++|+|+|.++++||+|||+++.+.....+
T Consensus 618 EnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999998874322 455666789999999999999999 999999999999999999999999999977655544
Q ss_pred e-eecccccccccCccccccCCCCcccceeehHHHHHHHHh--CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 476 L-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT--GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 476 ~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .....-...|||||.+..++++.++|||+||++|||+++ ...||.....++. .+..-......... .
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~~~------~ 764 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQGRQ------V 764 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCCcc------e
Confidence 3 344556789999999999999999999999999999976 7889876554331 11111111111111 1
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
....+.-++..+.+|+.+||..+-++||+++++...|.+.
T Consensus 765 ~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1122455677889999999999999999999999988764
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-38 Score=316.00 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=204.0
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|++.+.||+|+||.||+|... +++.||+|+...........+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 56999999999999999999975 68899999887655556677889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.++++.. .++++..+..++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||++....... .
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 161 (267)
T cd06646 89 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-A 161 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc-c
Confidence 999999999753 34899999999999999999999998 9999999999999999999999999997653221 1
Q ss_pred eeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 476 LTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
......++..|+|||.+. ...++.++||||||+++|||++|+.||......+... . +...... .+..
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~-~~~~~~~---~~~~ 231 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------L-MSKSNFQ---PPKL 231 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------e-eecCCCC---CCCC
Confidence 123345888999999874 3457889999999999999999999986443222100 0 0000000 0000
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
......+..+.+++.+||+.+|++|||++++++.|
T Consensus 232 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 --KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00123456788999999999999999999998754
No 148
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.6e-38 Score=319.62 Aligned_cols=263 Identities=25% Similarity=0.404 Sum_probs=203.5
Q ss_pred cCCccCCcccccCceEEEEEEecC---------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeee
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD---------------GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLG 380 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~---------------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~ 380 (597)
++|++.+.||+|+||.||++.... ...||+|..... .....+.+.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 235899987653 3445667999999999999999999999
Q ss_pred EEEeCCcceEEEeccCCCChhhHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeE
Q 038707 381 CCLETEVPLLVYEFIPNGTLYQYIHNQIE---------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANIL 451 (597)
Q Consensus 381 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIl 451 (597)
++...+..++||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 99999999999999999999999965321 124788999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh--CCCCCCCCCCcCC
Q 038707 452 LDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT--GQKPIRAINTDED 528 (597)
Q Consensus 452 l~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~--g~~p~~~~~~~~~ 528 (597)
+++++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++++|++ +..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 999999999999999765432221 1222335678999999988889999999999999999998 566776543222
Q ss_pred CcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 529 KSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
............ ........+...++.+.+|+.+||+.+|++||++.+|++.|++
T Consensus 241 --~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 --VIENTGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111000 0000011122234679999999999999999999999999863
No 149
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.7e-38 Score=314.19 Aligned_cols=250 Identities=27% Similarity=0.448 Sum_probs=198.3
Q ss_pred CcccccCceEEEEEEecC-Cc--EEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLTD-GR--IVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~-~~--~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||.||+|.+.+ +. .+++|..+.. .....+.+.+|++++.++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999753 43 5788887643 345567899999999999 799999999999999999999999999
Q ss_pred CChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 398 GTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 398 gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
++|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999999976421 124789999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
++....... .......+..|+|||++....++.++||||||++++||++ |..||......+ ....+..+.
T Consensus 158 l~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLPQGY 228 (270)
T ss_pred Cccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-------HHHHHhCCC
Confidence 985322111 1111223567999999988889999999999999999997 999996533211 111111111
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
..+.....+..+.+|+.+||+.+|.+|||+.+++..|+++-
T Consensus 229 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 ---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11112233456889999999999999999999999998864
No 150
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4e-38 Score=324.47 Aligned_cols=241 Identities=26% Similarity=0.378 Sum_probs=196.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCC-ccceeeeEEEeCCcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHR-NIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 392 (597)
+|++.+.||+|+||.||+|... +++.||||.+... .....+.+..|+.++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999976 5789999987642 334567788999999999764 5888999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999997543 4899999999999999999999999 999999999999999999999999998753322
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .......||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~~-------- 218 (324)
T cd05587 155 G-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHNV-------- 218 (324)
T ss_pred C-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCCC--------
Confidence 2 12334568999999999999999999999999999999999999997543221 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
..+...+.++.+|+.+||+.||.+|++.
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 --SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1122334568899999999999999986
No 151
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6.8e-38 Score=315.67 Aligned_cols=257 Identities=26% Similarity=0.481 Sum_probs=205.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc----EEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR----IVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~----~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++|++.+.||+|+||+||+|.+. +++ .||+|..+.. ......++.+|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 46888899999999999999854 444 4899987643 34456778999999999999999999999875 45789
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
++||+++|+|.++++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 86 ~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999998643 24899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~--- 230 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-------IPDLLEKGERL--- 230 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCcC---
Confidence 332221 122235678999999988899999999999999999998 899986433211 11122221111
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
......+..+.+++.+||+.||++||++.++++.|+.+...
T Consensus 231 ------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 231 ------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred ------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11123445688999999999999999999999999988653
No 152
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.7e-38 Score=314.42 Aligned_cols=255 Identities=26% Similarity=0.447 Sum_probs=204.8
Q ss_pred cCCccCCcccccCceEEEEEEecC-C---cEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-G---RIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~---~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
..|++.+.||+|+||.||+|.+.. + ..||||..... ......+|..|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 347888999999999999999753 3 36999987754 455567899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++++|.+++.... ..+++.+++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999997643 34899999999999999999999999 99999999999999999999999999876543
Q ss_pred CCcee--eeccc--ccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 472 DQTHL--TTKVQ--GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 472 ~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
..... ..... .+..|+|||.+....++.++||||||+++|||++ |..||......+ ....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-------~~~~i~~~~--- 228 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VINAIEQDY--- 228 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCC---
Confidence 22111 11111 2457999999998999999999999999999886 999986533211 111211110
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+.+..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 229 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 ------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111233456688999999999999999999999999875
No 153
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-38 Score=331.51 Aligned_cols=261 Identities=24% Similarity=0.328 Sum_probs=201.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cce
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VPL 389 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 389 (597)
+|++.+.||+|+||.||++... +++.||||++... ......++.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999975 6899999987642 3344567899999999999999999999998776 789
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
+|+||+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 5788887643 34899999999999999999999999 999999999999999999999999999865
Q ss_pred cCCCceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh--
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE-- 546 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 546 (597)
............+++.|+|||++.+. .++.++||||||+++|||++|+.||......+. ..............+
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ---LDLITDLLGTPSLEAMR 230 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCCHHHHH
Confidence 43333333444578999999998764 579999999999999999999999976543221 111111111100000
Q ss_pred --------hhhH--------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 547 --------ALDA--------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 547 --------~l~~--------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+.. ..........++++.+||.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 00000112235678899999999999999999999864
No 154
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.6e-38 Score=321.41 Aligned_cols=259 Identities=26% Similarity=0.440 Sum_probs=207.2
Q ss_pred cCCccCCcccccCceEEEEEEec--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT--------DGRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETE 386 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 386 (597)
++|.+.+.||+|+||.||++... ....+|+|..+.. ......++.+|+.+++++ +||||+++++++.+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56888999999999999999742 2457899987743 334567789999999999 6999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIE-------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD 453 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~ 453 (597)
..+++|||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 99999999999999999976421 235899999999999999999999999 99999999999999
Q ss_pred CCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcH
Q 038707 454 DKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSL 531 (597)
Q Consensus 454 ~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~ 531 (597)
+++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---- 244 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---- 244 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999999765432211 1112224467999999988899999999999999999999 888986543222
Q ss_pred HHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 532 VGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 532 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
+...+..+... ..+...+.++.+|+.+||+.+|++|||+.++++.|+++..
T Consensus 245 ---~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 245 ---LFKLLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ---HHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 22222222111 1122334568899999999999999999999999998874
No 155
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.2e-38 Score=333.97 Aligned_cols=250 Identities=23% Similarity=0.291 Sum_probs=196.9
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.|++.++||+|+||+||+|... +++.+|+|.+... .......+.+|+.++++++||||+++++.+.+.+..+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999975 6889999987642 23445678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999997642 4889999999999999999999999 9999999999999999999999999975321000
Q ss_pred ----------------------------------------------ceeeecccccccccCccccccCCCCcccceeehH
Q 038707 474 ----------------------------------------------THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFG 507 (597)
Q Consensus 474 ----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG 507 (597)
........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0001224589999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC---HHH
Q 038707 508 VVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT---MKE 584 (597)
Q Consensus 508 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~e 584 (597)
|+||||++|+.||......+ ........... .........++++.++|.+|+ .+|.+|++ +.+
T Consensus 236 vil~elltG~~Pf~~~~~~~------~~~~i~~~~~~-------~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 301 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLE------TQMKVINWQTS-------LHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADE 301 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHH------HHHHHHccCCC-------cCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHH
Confidence 99999999999997543221 11111110000 000111223456778888876 59999987 777
Q ss_pred HHH
Q 038707 585 VTN 587 (597)
Q Consensus 585 vl~ 587 (597)
+++
T Consensus 302 i~~ 304 (382)
T cd05625 302 IKA 304 (382)
T ss_pred Hhc
Confidence 764
No 156
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-39 Score=297.02 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=210.4
Q ss_pred HHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--------hhhHHHHHHHHHHHhhc-CCCccceeeeEE
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--------ETNVEQFINEVVILSQI-NHRNIVKLLGCC 382 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 382 (597)
+...++|...++||.|..++|-+...+ +|...|+|++.... ..-.+.-++|+.||+++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344567888899999999999988865 68888988765421 12245667899999998 699999999999
Q ss_pred EeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEee
Q 038707 383 LETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 462 (597)
Q Consensus 383 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~D 462 (597)
+.....++|+|.|+.|.|.|+|.+.. .++++...+|++|+.+|++|||..+ |+||||||+|||+|++-++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 99999999999999999999998654 4999999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCceeeecccccccccCcccccc------CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 463 FGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS------SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 463 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
||++..+... ......+|||+|+|||.+.- ..|+...|+|+.|||||.||.|.+||.... .....
T Consensus 167 FGFa~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-------QmlML 237 (411)
T KOG0599|consen 167 FGFACQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-------QMLML 237 (411)
T ss_pred cceeeccCCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-------HHHHH
Confidence 9999877543 34566789999999998742 468899999999999999999999996421 12234
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.++.+|... .......+.+....+||.+||+.||.+|.|++|+|..
T Consensus 238 R~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 238 RMIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 444454432 1122235567788999999999999999999999863
No 157
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.4e-38 Score=317.64 Aligned_cols=264 Identities=26% Similarity=0.420 Sum_probs=206.7
Q ss_pred hcCCccCCcccccCceEEEEEEecC-----------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccce
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-----------------GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVK 377 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 377 (597)
.++|++.+.||+|+||.||++.+.+ +..||+|.+... .....+++.+|+.++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578999999999999999988642 246899987653 3345678999999999999999999
Q ss_pred eeeEEEeCCcceEEEeccCCCChhhHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCC
Q 038707 378 LLGCCLETEVPLLVYEFIPNGTLYQYIHNQIE--------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSAN 449 (597)
Q Consensus 378 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~N 449 (597)
+++++...+..+++|||+++++|.+++.+... ...+++..++.++.|++.||+|||+.+ |+|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 99999999999999999999999999986431 125899999999999999999999999 9999999999
Q ss_pred eEeCCCCcEEEeeccccccccCCCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh--CCCCCCCCCCc
Q 038707 450 ILLDDKYRAKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT--GQKPIRAINTD 526 (597)
Q Consensus 450 Ill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~--g~~p~~~~~~~ 526 (597)
|++++++.+||+|||+++....... .......+++.|+|||.+....++.++||||||+++|||++ +..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999976543322 12233446778999999988889999999999999999998 66777543321
Q ss_pred CCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 527 EDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
+ .........+... ...........+.++.+|+.+||+.+|++|||+.||++.|++
T Consensus 241 ~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 241 Q---VIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred H---HHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1 1111111111100 001111122334679999999999999999999999999863
No 158
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.8e-38 Score=328.80 Aligned_cols=258 Identities=24% Similarity=0.340 Sum_probs=203.6
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETE 386 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 386 (597)
++....++|++.+.||+|+||.||++... +++.+|+|.+.. ........+.+|+.+++.++||||+++++.+.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 44445678999999999999999999976 588999998753 22334556889999999999999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..++||||+++|+|.+++... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 999999999999999999753 3888999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCccccccC----CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQSS----QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
...............||+.|+|||++... .++.++||||||++||||++|+.||...+.. ..+.......
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~ 263 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHK 263 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC
Confidence 87643333333455699999999998653 3789999999999999999999999753321 1122221111
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKM--RPTMKEVTNE 588 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~evl~~ 588 (597)
..... ......+..+.+||.+||..++.+ ||++.++++.
T Consensus 264 ~~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 264 NSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CcccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11110 011234566889999999844433 7899988875
No 159
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.2e-38 Score=311.78 Aligned_cols=249 Identities=28% Similarity=0.476 Sum_probs=201.9
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEE-eCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCL-ETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 395 (597)
++|++.+.||+|+||.||++... ++.+|+|..+.. ...+.+.+|+.++++++|+|++++++++. +.+..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888999999999999999864 788999987642 33567899999999999999999999765 456789999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++++.. ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 9999999998643 234889999999999999999999999 9999999999999999999999999987543222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.....+..|+|||++.+..++.++||||||+++|+|++ |+.||......+ ....+..+. ..
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------~~ 218 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGY---------KM 218 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCC---------CC
Confidence 22334568999999988889999999999999999998 999986432211 111111111 01
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
......+..+.+++.+||+.+|++|||+.++++.|++|
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 11233456788999999999999999999999999865
No 160
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=310.88 Aligned_cols=248 Identities=24% Similarity=0.398 Sum_probs=212.6
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
|.++.+||+|+||.||++.++ .|..+|||++.. +.+.+++..|+.+|++.+.|++|+++|.+.....+|+||||+..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 667789999999999999976 699999999875 56788999999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|++.+.++.. +++|+++++..+++..++||+|||... -+|||||..|||++.+|.+||+|||.+-.+.. .....
T Consensus 113 GSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TMAKR 186 (502)
T KOG0574|consen 113 GSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TMAKR 186 (502)
T ss_pred CcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh-hHHhh
Confidence 9999999864 457999999999999999999999988 78999999999999999999999999976643 23344
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|||||++..-.|+.++||||||++..||..|++||....+-.. .-++.. .+......+
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-------IFMIPT-------~PPPTF~KP 252 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-------IFMIPT-------KPPPTFKKP 252 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-------eEeccC-------CCCCCCCCh
Confidence 567799999999999999999999999999999999999999976543221 001100 111122335
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+.++.++++.||-.+|++|.|+.++++.
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 7778889999999999999999999998874
No 161
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2e-38 Score=325.78 Aligned_cols=238 Identities=28% Similarity=0.357 Sum_probs=193.7
Q ss_pred CcccccCceEEEEEEe----cCCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 323 RILGQGGQGTVYKGML----TDGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~----~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
+.||+|+||.||++.. .+|+.+|+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 257899999876422 2234567889999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.+. ..+++..+..++.||++||.|||+.+ |+||||||+|||+++++.+||+|||++....... ..
T Consensus 82 ~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~ 154 (318)
T cd05582 82 GGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KK 154 (318)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cc
Confidence 99999999754 34899999999999999999999999 9999999999999999999999999987654322 22
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
.....|++.|+|||.+....++.++||||||+++|||++|+.||......+ ....+..... ..
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-------~~~~i~~~~~----------~~ 217 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-------TMTMILKAKL----------GM 217 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-------HHHHHHcCCC----------CC
Confidence 334568999999999998889999999999999999999999997533211 1111111111 11
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPTMKE 584 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt~~e 584 (597)
+...+..+.+|+.+||+.||++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 2234456889999999999999999554
No 162
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.1e-38 Score=322.94 Aligned_cols=241 Identities=27% Similarity=0.379 Sum_probs=195.8
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+|++.+.||+|+||.||+|... +++.||||.+... .....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999976 5789999987642 233445677888888887 5899999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999987543 4899999999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-------~~~~i~~~~~-------- 218 (323)
T cd05616 155 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-------LFQSIMEHNV-------- 218 (323)
T ss_pred C-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC--------
Confidence 2 12334568999999999999999999999999999999999999997543221 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
..+...+.++.+|+.+||+.+|++|++.
T Consensus 219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 --AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1122345668899999999999999985
No 163
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.5e-38 Score=311.96 Aligned_cols=252 Identities=29% Similarity=0.491 Sum_probs=203.9
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
.+|++.+.||+|+||.||++.+.+++.+|+|.+... .....++.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 457888999999999999999877889999987643 2234678999999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.... .+++++.++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++.........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 83 HGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 999999997643 34889999999999999999999999 9999999999999999999999999987654332222
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+. ....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~--~~~~------ 222 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-------VVETINAGF--RLYK------ 222 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHhCCC--CCCC------
Confidence 222335678999999998889999999999999999998 999986433211 112221110 0001
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
+...++.+.+|+.+||+.+|++|||+.+++++|.
T Consensus 223 -~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 -PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1113466899999999999999999999999874
No 164
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7e-38 Score=311.11 Aligned_cols=250 Identities=25% Similarity=0.368 Sum_probs=205.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
+|++.+.||+|+||.||++... +++.+|+|.... ......+.+.+|+.++++++|+||+++++.+.+.+..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999976 688999998754 23445678889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ...+++..++.++.|++.||.|||+++ |+|+||||+||++++++.++|+|||++....... .
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~ 155 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-A 155 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc-c
Confidence 9999999987542 335889999999999999999999999 9999999999999999999999999987654322 2
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......+++.|+|||++.+..++.++|+||||+++|+|++|+.||....... ....+..+....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~--------- 219 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-------LILKVCQGSYKP--------- 219 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-------HHHHHhcCCCCC---------
Confidence 2234568889999999998889999999999999999999999996432111 111122221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+...+..+.+|+.+||+.||++||++.+++.+
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 122334568899999999999999999999875
No 165
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.7e-38 Score=314.64 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=195.3
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|+||+||++... +|+.+|+|.+... .......+..|++++++++||||+++++.+.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999975 5899999987532 122234566799999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecc
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKV 480 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 480 (597)
.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++....... .....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~ 154 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQR 154 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeecc
Confidence 99887543 334899999999999999999999999 9999999999999999999999999987654322 22344
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
.|+..|+|||++.+..++.++||||||+++|||++|+.||....... .... ......... .. ......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~-~~~~~~~~~--------~~-~~~~~~ 222 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEE-LKRRTLEDE--------VK-FEHQNF 222 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHH-HHHHhhccc--------cc-cccccC
Confidence 68999999999998889999999999999999999999997533211 1111 111110100 00 001234
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
+.++.+|+.+||+.||++||+++|+++.+
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 55688999999999999999997766544
No 166
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.1e-37 Score=310.02 Aligned_cols=249 Identities=32% Similarity=0.515 Sum_probs=205.5
Q ss_pred CcccccCceEEEEEEecC----CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLTD----GRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||.||++.... +..+++|........ ..+.+.+|+..++.++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999999763 789999998764443 378899999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 398 GTLYQYIHNQIE------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 398 gsL~~~l~~~~~------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
++|.+++..... ...+++..++.++.|+++||+|||+++ ++|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987521 256999999999999999999999999 99999999999999999999999999987654
Q ss_pred CCc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 472 DQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 472 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
... .......++..|+|||.+....++.++||||||+++++|++ |..||......+ ....+..+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~----- 225 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-------VLEYLRKGYR----- 225 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC-----
Confidence 321 22333457889999999988899999999999999999999 699997652211 1222222111
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
...+...+.++.+++.+||+.+|++|||+.++++.|+
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ----LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1112334667899999999999999999999999874
No 167
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.1e-38 Score=315.79 Aligned_cols=246 Identities=24% Similarity=0.291 Sum_probs=196.6
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|+||+||++... +++.+|+|.+.... ....+.+..|+.++++++|+||+++.+++.+....++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999975 68999999876322 22345678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeec
Q 038707 401 YQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK 479 (597)
Q Consensus 401 ~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 479 (597)
.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 98886432 2345899999999999999999999999 99999999999999999999999999976543222 2234
Q ss_pred ccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHH
Q 038707 480 VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKE 559 (597)
Q Consensus 480 ~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 559 (597)
..||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ......+.... ...+..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~----------~~~~~~ 223 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN---KELKQRILNDS----------VTYPDK 223 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH---HHHHHhhcccC----------CCCccc
Confidence 56899999999999999999999999999999999999999754322110 00111110000 011233
Q ss_pred HHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 560 EIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 560 ~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
.+..+.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 456788999999999999999 6677775
No 168
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-38 Score=333.86 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=198.1
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
+|++.+.||+|+||.||++... +++.||||.+... .......+.+|+.+|++++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999975 5899999987532 22345678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997642 4889999999999999999999999 9999999999999999999999999975321000
Q ss_pred ------------------------------------------ceeeecccccccccCccccccCCCCcccceeehHHHHH
Q 038707 474 ------------------------------------------THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLV 511 (597)
Q Consensus 474 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ 511 (597)
........||+.|||||++.+..++.++|||||||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00011246899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 038707 512 EILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRP---TMKEVTNE 588 (597)
Q Consensus 512 ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP---t~~evl~~ 588 (597)
||++|+.||......+. . ..+...... .........+.++.++|.+|+ .+|.+|+ ++.++++.
T Consensus 236 ell~G~~Pf~~~~~~~~------~-~~i~~~~~~------~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTPAET------Q-LKVINWETT------LHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCHHHH------H-HHHhccCcc------ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999976442221 1 111110000 000011123456778888876 5999999 88888754
No 169
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.8e-38 Score=316.11 Aligned_cols=262 Identities=27% Similarity=0.403 Sum_probs=204.4
Q ss_pred cCCccCCcccccCceEEEEEEe-----cCCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccc
Q 038707 317 DNYNANRILGQGGQGTVYKGML-----TDGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVP 388 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 388 (597)
..|++.+.||+|+||.||++.+ .++..||+|.+.... ......+.+|+.++++++||||+++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3578889999999999999984 247889999987543 44457899999999999999999999998875 567
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||+++++|.+++.+.. ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 89999999999999997643 24899999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCce--eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCc--------CCCcHHHHHHHH
Q 038707 469 VMVDQTH--LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTD--------EDKSLVGYFLQA 538 (597)
Q Consensus 469 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~--------~~~~~~~~~~~~ 538 (597)
....... ......++..|+|||.+.+..++.++||||||+++|||++++.|....... ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6433221 122344667899999998888999999999999999999987764321100 000001111111
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
...+.. .......+..+.+|+.+||+.+|++|||++++++.|+++
T Consensus 239 ~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKR---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCcc---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111 111223456799999999999999999999999999876
No 170
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-37 Score=316.38 Aligned_cols=263 Identities=25% Similarity=0.398 Sum_probs=204.0
Q ss_pred cCCccCCcccccCceEEEEEEec-----------------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCcccee
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-----------------DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKL 378 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l 378 (597)
++|++.+.||+|+||.||++... ++..+|+|..... ......++.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999998532 2346899988753 34456789999999999999999999
Q ss_pred eeEEEeCCcceEEEeccCCCChhhHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCe
Q 038707 379 LGCCLETEVPLLVYEFIPNGTLYQYIHNQIE--------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANI 450 (597)
Q Consensus 379 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NI 450 (597)
++++.+.+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 9999999999999999999999999986421 124778899999999999999999999 99999999999
Q ss_pred EeCCCCcEEEeeccccccccCCCcee-eecccccccccCccccccCCCCcccceeehHHHHHHHHh--CCCCCCCCCCcC
Q 038707 451 LLDDKYRAKVSDFGTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT--GQKPIRAINTDE 527 (597)
Q Consensus 451 ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~--g~~p~~~~~~~~ 527 (597)
|+++++.+||+|||++.......... .....++..|+|||......++.++||||||+++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999997654332211 122334678999999888889999999999999999998 778886543222
Q ss_pred CCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 528 DKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
. ............. ......+...+..+.+|+.+||+.||++||++.+|++.|++
T Consensus 242 ~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 V---IENTGEFFRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred H---HHHHHHHHhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 1111111100000 00001112334678899999999999999999999999864
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.9e-38 Score=322.34 Aligned_cols=261 Identities=22% Similarity=0.331 Sum_probs=200.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|.+.+.||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999976 58899999876533 22345678899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++ +|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 975 8888887543 24889999999999999999999999 99999999999999999999999999876432221
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC---chhhh---
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN---RLFEA--- 547 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 547 (597)
......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+.... ........ .+...
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGISSN 235 (309)
T ss_pred -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCCHHHHhhhcch
Confidence 1223457899999998865 5689999999999999999999999976543321111 11110000 00000
Q ss_pred ---hhHHhh-------hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 ---LDARVL-------KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 ---l~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.... .......++++.+|+.+||+.||.+|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000 0011223567889999999999999999999987
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.1e-37 Score=312.17 Aligned_cols=251 Identities=28% Similarity=0.419 Sum_probs=200.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.++||+|+||.||+|.+. +++.+|+|..... ......++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 35788899999999999999964 6889999987643 344456799999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 9999997652 2788899999999999999999999 999999999999999999999999999765322
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||......+...........+..... ..
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 219 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--------PV 219 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--------CC
Confidence 123346889999999999889999999999999999999999999754332211111111111111000 00
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......++++.+++.+||+.+|++||+++|+++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0112234568899999999999999999999865
No 173
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-37 Score=307.58 Aligned_cols=248 Identities=29% Similarity=0.474 Sum_probs=201.5
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChh
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
++||+|++|.||++.+.+++.|++|....... .....+.+|+.++++++|+||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 47999999999999987799999998775433 35678999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee-ecc
Q 038707 402 QYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT-TKV 480 (597)
Q Consensus 402 ~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~-~~~ 480 (597)
+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++........... ...
T Consensus 81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 9997643 24889999999999999999999999 99999999999999999999999999876532221111 122
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKE 559 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 559 (597)
..+..|+|||.+.+..++.++||||||++++||++ |..||....... ....+.... ....+..
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-------~~~~~~~~~---------~~~~~~~ 219 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-------TRERIESGY---------RMPAPQL 219 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-------HHHHHhcCC---------CCCCCcc
Confidence 34567999999988899999999999999999999 888886543221 111111110 0111233
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 560 EIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 560 ~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
.+.++.+++.+||+.+|++|||+.||++.|+.
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 45678999999999999999999999999863
No 174
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.4e-39 Score=310.65 Aligned_cols=265 Identities=26% Similarity=0.344 Sum_probs=200.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cce
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VPL 389 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 389 (597)
+-.|...+++|.|+||.||+|... +++.||||+.-...+. -.+|+++|+.++|||||+|+-+|.... ..-
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 345777889999999999999976 5799999987643332 236899999999999999999887533 234
Q ss_pred EEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeeccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGTSR 467 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfgl~~ 467 (597)
|||||||. +|.++++... .+..++...+.-+..||.+||.|||+++ |+||||||.|+|+|.+ |.+||+|||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999976 8999988531 1234888889999999999999999999 9999999999999976 899999999999
Q ss_pred cccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch--
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL-- 544 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 544 (597)
.+...+.. ..+..|..|.|||++.+ ..|+.+.||||.||++.||+-|++-|.+.+..+. +.. ....+.....
T Consensus 175 ~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~e-Iik~lG~Pt~e~ 249 (364)
T KOG0658|consen 175 VLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVE-IIKVLGTPTRED 249 (364)
T ss_pred eeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHH-HHHHhCCCCHHH
Confidence 87654433 45667889999999876 6799999999999999999999999987443321 111 1111111100
Q ss_pred --------hhhhhHHhhhh-----hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhhhh
Q 038707 545 --------FEALDARVLKE-----AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN--ELGGIR 593 (597)
Q Consensus 545 --------~~~l~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~--~L~~l~ 593 (597)
.+...+.+... .....++++.+|+.++|+.+|.+|.++.|++. .++.+|
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 01111111111 23445677899999999999999999999985 344444
No 175
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.5e-38 Score=317.85 Aligned_cols=250 Identities=26% Similarity=0.426 Sum_probs=205.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.+|++.+.||+|++|.||+|... +++.+++|.+........+.+.+|+.+++.++|+||+++++.+.+....++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999965 68899999887666666788999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.+. .+++.++..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 100 ~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~- 171 (296)
T cd06654 100 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (296)
T ss_pred CCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc-
Confidence 999999998653 3889999999999999999999999 99999999999999999999999999876432221
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .......... .. ..
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~~-~~-------~~ 237 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNGT-PE-------LQ 237 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCCC-CC-------CC
Confidence 1223458889999999988889999999999999999999999996533211 1111111110 00 01
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
........+.+|+.+||..+|++||++.++++.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 123345668899999999999999999999874
No 176
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.1e-38 Score=321.85 Aligned_cols=240 Identities=26% Similarity=0.364 Sum_probs=193.2
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||.||++.+. +++.||+|.++.. .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999976 5889999987642 123455677788888765 899999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRA 153 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cce
Confidence 9999998764 24899999999999999999999999 9999999999999999999999999987532211 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.... ...+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-------~~~~~~~~~----------~~~~ 216 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-------LFESIRVDT----------PHYP 216 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC----------CCCC
Confidence 44568999999999999999999999999999999999999997543211 111111111 0111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMK-EVT 586 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~-evl 586 (597)
.....++.+|+.+||+.||++||++. +++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 22345688999999999999999985 554
No 177
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.9e-38 Score=320.54 Aligned_cols=240 Identities=27% Similarity=0.377 Sum_probs=193.1
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||+|... +++.||||.++.. .......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5789999987642 223445677788888764 899999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++.++..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........ ..
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 153 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KT 153 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-ce
Confidence 9999999754 24889999999999999999999999 99999999999999999999999999875432221 22
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~~~----------~~~ 216 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-------LFQSIRMDNP----------CYP 216 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC----------CCC
Confidence 34568999999999998899999999999999999999999997543211 1111111110 011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMK-EVT 586 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~-evl 586 (597)
.....++.+|+.+||+.||++||++. +++
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 22345678999999999999999997 554
No 178
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.2e-38 Score=322.91 Aligned_cols=237 Identities=25% Similarity=0.377 Sum_probs=190.2
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHH-HHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVV-ILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||+|... +++.||||.+... ......++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999976 6899999987642 2223345555555 56789999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTT 153 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcc
Confidence 9999999754 24899999999999999999999999 999999999999999999999999998754322 1223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+ .+ ..+..... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~-~~i~~~~~----------~~~ 216 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MY-DNILNKPL----------RLK 216 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HH-HHHHcCCC----------CCC
Confidence 34568999999999999999999999999999999999999997533211 11 11111111 111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMK 583 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~ 583 (597)
...+..+.+++.+||+.||.+||++.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 23356688999999999999999985
No 179
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.3e-38 Score=322.08 Aligned_cols=241 Identities=26% Similarity=0.385 Sum_probs=196.4
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||++... +++.||||.++.. .......+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5789999987642 234456778899999888 699999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.+.. .+++.++..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~ 153 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-TT 153 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-cc
Confidence 99999987643 4899999999999999999999999 99999999999999999999999999875322221 22
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+..... ..+
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-------~~~~i~~~~~----------~~~ 216 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-------LFQSILEDEV----------RYP 216 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-------HHHHHHcCCC----------CCC
Confidence 33458999999999999999999999999999999999999997543211 1111111111 112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTM-----KEVTN 587 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~-----~evl~ 587 (597)
...+..+.+||.+||+.||.+||++ .++++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 2345568899999999999999999 77765
No 180
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.6e-37 Score=309.03 Aligned_cols=248 Identities=29% Similarity=0.461 Sum_probs=198.9
Q ss_pred CcccccCceEEEEEEecC----CcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLTD----GRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||.||+|.+.. +..+|+|....... ...+++.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998542 26899998775433 35567999999999999999999999876 4567999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.... .+++..++.++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999998653 4899999999999999999999999 99999999999999999999999999986643332211
Q ss_pred --ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 478 --TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 478 --~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
....++..|+|||.+....++.++||||||+++|+|++ |..||......+ +...+..... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 217 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-------VIAMLESGER---------L 217 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-------HHHHHHcCCc---------C
Confidence 11223467999999998899999999999999999998 999986543211 1122222211 0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
..+...+..+.++|.+||..+|++||++.+|++.|+++.
T Consensus 218 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 112234467889999999999999999999999999864
No 181
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.8e-37 Score=309.43 Aligned_cols=251 Identities=29% Similarity=0.477 Sum_probs=196.0
Q ss_pred CcccccCceEEEEEEec----CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEE-eCCcceEEEeccC
Q 038707 323 RILGQGGQGTVYKGMLT----DGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCL-ETEVPLLVYEFIP 396 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 396 (597)
+.||+|+||.||+|.+. +...+|||+... ......+.+.+|+.+++.++||||+++++++. .+...+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999863 245799998754 33455778999999999999999999999776 4556899999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.+... .+++..+..++.|+++||.|||+.+ ++||||||+|||+++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999976432 3678888999999999999999998 9999999999999999999999999997654322111
Q ss_pred ---eecccccccccCccccccCCCCcccceeehHHHHHHHHhC-CCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 477 ---TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTG-QKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 477 ---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.....++..|+|||.+....++.++||||||+++|||++| .+||...... ... ..+..+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~------~~~-~~~~~~~~-------- 220 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF------DIT-VYLLQGRR-------- 220 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH------HHH-HHHhcCCC--------
Confidence 1223456789999999888999999999999999999995 5566432211 111 11111110
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
...+...+..+.+++.+||+.+|++||++.+|+++|+++..
T Consensus 221 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 -LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00112234568899999999999999999999999998764
No 182
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-37 Score=323.53 Aligned_cols=261 Identities=28% Similarity=0.440 Sum_probs=204.6
Q ss_pred hcCCccCCcccccCceEEEEEEe------cCCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeC-C
Q 038707 316 TDNYNANRILGQGGQGTVYKGML------TDGRIVAVKKSKLVD-ETNVEQFINEVVILSQI-NHRNIVKLLGCCLET-E 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 386 (597)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35799999999999999999974 246889999987532 33456788999999999 689999999988654 4
Q ss_pred cceEEEeccCCCChhhHHhhcCC---------------------------------------------------------
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIE--------------------------------------------------------- 409 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 409 (597)
..+++|||+++|+|.++++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999999975321
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce-eeeccc
Q 038707 410 -------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQ 481 (597)
Q Consensus 410 -------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~ 481 (597)
...+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||++......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123688899999999999999999999 999999999999999999999999998765322211 112233
Q ss_pred ccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 482 GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 482 gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ .+...+..+.... .+...
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~---------~~~~~ 307 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMR---------APDYT 307 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH------HHHHHHhccCCCC---------CCCCC
Confidence 5678999999988899999999999999999997 999986543221 1112222221110 01112
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 561 IMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
++++.+++.+||+.+|++|||+.||++.|+.+..
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 3468899999999999999999999999998864
No 183
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-37 Score=315.47 Aligned_cols=257 Identities=25% Similarity=0.442 Sum_probs=206.4
Q ss_pred hcCCccCCcccccCceEEEEEEec------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 388 (597)
.++|++.+.||+|+||.||++... ++..+|+|.+.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457899999999999999999863 46789999876533 34456799999999999999999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCC
Q 038707 389 LLVYEFIPNGTLYQYIHNQIE-------------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSAN 449 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~N 449 (597)
+++|||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 999999999999999975321 124788999999999999999999999 9999999999
Q ss_pred eEeCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcC
Q 038707 450 ILLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDE 527 (597)
Q Consensus 450 Ill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~ 527 (597)
||+++++.+||+|||++......... .......+..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998754322211 1122234667999999988899999999999999999998 888886543221
Q ss_pred CCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 528 DKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
....+..+.... .+...+.++.+|+.+||+.+|++|||+.|+++.|++
T Consensus 241 -------~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 -------VIYYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -------HHHHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 122222222211 122345678999999999999999999999999974
No 184
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.5e-37 Score=321.12 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=199.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||+|.+.. ......+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46899999999999999999976 589999998753 23334566889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997632 24899999999999999999999999 999999999999999999999999998765443
Q ss_pred CceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.........||+.|+|||++.. ..++.++||||||+++|+|++|+.||......+ ..............
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~ 229 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKEHFQF 229 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH------HHHHHHcCCCcccC
Confidence 3333333468999999999863 457889999999999999999999996532211 11111111111100
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCC--CCCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGK--MRPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~--~RPt~~evl~~ 588 (597)
.......++.+.+|+.+||..+++ .||+++++++.
T Consensus 230 ------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 ------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000122456688899998865443 37899988865
No 185
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-37 Score=322.75 Aligned_cols=261 Identities=27% Similarity=0.440 Sum_probs=208.3
Q ss_pred HhcCCccCCcccccCceEEEEEEecC--------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTD--------GRIVAVKKSKLV-DETNVEQFINEVVILSQI-NHRNIVKLLGCCLE 384 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 384 (597)
...+|++.+.||+|+||.||++.... ...||+|..+.. .....+++.+|+.+++++ +||||+++++++.+
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 34568999999999999999997421 236899987643 344567899999999999 79999999999999
Q ss_pred CCcceEEEeccCCCChhhHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeE
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQI-------------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANIL 451 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIl 451 (597)
.+..+++|||+++|+|.+++.+.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEE
Confidence 999999999999999999997632 1234889999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCC
Q 038707 452 LDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDK 529 (597)
Q Consensus 452 l~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~ 529 (597)
+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||.....++
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 244 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-- 244 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--
Confidence 999999999999999765432211 1222234567999999999999999999999999999998 888886543222
Q ss_pred cHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 530 SLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
+...+..+... ......+..+.+|+.+||+.+|++||++.|+++.|+++.+
T Consensus 245 -----~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 245 -----LFKLLKEGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred -----HHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 22222221111 1122334568899999999999999999999999998874
No 186
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=320.48 Aligned_cols=253 Identities=28% Similarity=0.384 Sum_probs=215.7
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcc
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVP 388 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 388 (597)
.....|++.+.||+|.||.||+++.+ +|+.+|+|.+.... ....+.+.+|+.+|+++. |||||.+.+.+.+.+..
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 34567999999999999999999987 49999999876432 235678999999999998 99999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC----CcEEEeecc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK----YRAKVSDFG 464 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~----~~~kl~Dfg 464 (597)
++|||++.+|.|.+.+... .+++..+..++.|++.++.|||+.+ |+||||||+|+|+... +.+|++|||
T Consensus 112 ~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 9999999999999999876 2999999999999999999999999 9999999999999543 579999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL 544 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (597)
++..... ........||+.|+|||++....|+..+||||+|+++|.|++|.+||.+....+. ...+..+.+
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-------~~~i~~~~~ 255 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-------FLAILRGDF 255 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-------HHHHHcCCC
Confidence 9988755 4556778899999999999999999999999999999999999999987554331 112223322
Q ss_pred hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 545 FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 545 ~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.............+.++|+.||..||.+|+|+.++++.
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 12233345567789999999999999999999999984
No 187
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.4e-37 Score=309.14 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=201.8
Q ss_pred CcccccCceEEEEEEecC--C--cEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLTD--G--RIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~--~--~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++.+.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 478999999999999743 3 3699999876555 567789999999999999999999999988 888999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce--
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-- 475 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~-- 475 (597)
++|.+++.+... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999999987542 45899999999999999999999999 999999999999999999999999999876543221
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||.+....++.++||||||++++||++ |+.||......+ ........... .
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~---------~ 220 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ------ILKKIDKEGER---------L 220 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHhcCCc---------C
Confidence 1122446788999999998899999999999999999998 999986443221 11111111100 0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 111234567889999999999999999999999885
No 188
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.3e-37 Score=312.72 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=207.0
Q ss_pred cCCccCCcccccCceEEEEEEec------CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT------DGRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
++|+..+.||+|+||+||+|..+ +.+.+++|........ ..+++.+|+.++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999964 2467999987654443 5678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 390 LVYEFIPNGTLYQYIHNQIEE------FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
+||||+++++|.+++...... ..+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.+||+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999865422 25899999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 464 GTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 464 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
|++...............++..|+|||.+.+...+.++||||||+++++|++ |..||....... .......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-------~~~~~~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-------VLNRLQAG 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-------HHHHHHcC
Confidence 9987544332222333446778999999988888999999999999999999 788886433211 11222222
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
... .......+..+.+++.+||+.+|++|||+.|++++|.+
T Consensus 235 ~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 235 KLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 111 11112344578999999999999999999999999863
No 189
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.8e-38 Score=310.88 Aligned_cols=250 Identities=34% Similarity=0.558 Sum_probs=201.3
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHH--HHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVE--QFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
|++.+.||+|+||+||++... +++.+|+|........... ...+|+.++++++||||+++++++.+.+..++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677889999999999999987 4679999998865544433 3467999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++... ..+++..++.++.||++||.+||+.+ |+|+||||+||++++++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNE 153 (260)
T ss_dssp TTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTS
T ss_pred cccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc-ccccc
Confidence 999999999832 34899999999999999999999999 999999999999999999999999999754 22223
Q ss_pred eeecccccccccCccccc-cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQ-SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||++. +...+.++||||||+++++|++|..||......+ ........ .......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~---~~~~~~~~---------~~~~~~~ 221 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD---QLEIIEKI---------LKRPLPS 221 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH---HHHHHHHH---------HHTHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchh---hhhhhhhc---------ccccccc
Confidence 344566899999999998 8889999999999999999999999997541111 11111000 0000000
Q ss_pred hh--hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 555 EA--KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 555 ~~--~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.. .......+.+++.+||+.||++||++.++++
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 0111267999999999999999999999985
No 190
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-37 Score=318.23 Aligned_cols=263 Identities=29% Similarity=0.419 Sum_probs=203.4
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|+||.||++... ++..+|+|..... ......++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999976 5788999987653 334456789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.++++.. ..+++..+..++.|+++||.|||+ .+ ++|+||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999999764 348999999999999999999998 46 999999999999999999999999998754322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc------------
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE------------ 541 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 541 (597)
......++..|+|||.+.+..++.++||||||+++++|++|+.||...+.................
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 123346889999999998888999999999999999999999998654322110000000000000
Q ss_pred -----CchhhhhhHHhhh----hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 542 -----NRLFEALDARVLK----EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 542 -----~~~~~~l~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+..+..... ......+.++.+|+.+||+.+|++|||+++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000001000000 0011234568999999999999999999999876
No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-37 Score=314.33 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=200.7
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999976 68999999876432 23356788999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++ ++|.+++........+++..++.++.||++||.|||+.+ ++|+||||+|||+++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 689999876554456999999999999999999999999 9999999999999999999999999987553222
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh--cCch---h--h
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN--ENRL---F--E 546 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~---~--~ 546 (597)
.......+++.|+|||.+.+ ..++.++||||||+++++|++|+.||......+ .....+..... +..+ . .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchhhH
Confidence 12223346889999998865 457899999999999999999999997543211 01000000000 0000 0 0
Q ss_pred hhh-------HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALD-------ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
... ...........++++.+||.+||+.||.+|||+++|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 00000111224567889999999999999999999985
No 192
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.1e-37 Score=314.67 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=207.9
Q ss_pred cCCccCCcccccCceEEEEEEec-----CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEe--CCcc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-----DGRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLE--TEVP 388 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 388 (597)
+.|++.+.||+|+||.||++.+. .++.+|||.+...... ..+.+.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777889999999999999864 3678999988754443 56789999999999999999999999887 5578
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
+++|||+++++|.+++..... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 999999999999999986532 4899999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCce--eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCC--------cHHHHHHHH
Q 038707 469 VMVDQTH--LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDK--------SLVGYFLQA 538 (597)
Q Consensus 469 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~--------~~~~~~~~~ 538 (597)
....... ......++..|+|||.+.+..++.++||||||++++||++|+.|+......... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 6532221 111233556799999998889999999999999999999999998653322111 001111111
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
+... .........+.++.+|+.+||+.+|++|||+.||+++|++++
T Consensus 239 ~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 239 LKEG---------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHcC---------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111 111112234467999999999999999999999999999874
No 193
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.9e-38 Score=321.68 Aligned_cols=243 Identities=26% Similarity=0.356 Sum_probs=191.6
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHH-HHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEV-VILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||++... +++.+|+|.+.... .....++..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999999999976 57889999876321 22233444444 456788999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.... .+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~ 153 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTT 153 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCc
Confidence 99999997542 4788899999999999999999999 9999999999999999999999999987543222 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ .+ ..+..... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~-~~i~~~~~----------~~~ 216 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MY-DNILNKPL----------QLK 216 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH------HH-HHHHhCCc----------CCC
Confidence 34568999999999999999999999999999999999999997533221 11 11111111 111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
...+..+.+++.+||+.+|.+||++.+.+.++
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 217 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 23456688999999999999999987544433
No 194
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=345.19 Aligned_cols=260 Identities=24% Similarity=0.356 Sum_probs=205.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.++||+|+||.||+|.+. +++.||||++... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999976 5899999987642 2334567999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 393 EFIPNGTLYQYIHNQIE--------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
||+++++|.+++..... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999975211 123567888999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCc-----------------eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC
Q 038707 465 TSRSVMVDQT-----------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE 527 (597)
Q Consensus 465 l~~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~ 527 (597)
++........ .......||+.|||||++.+..++.++||||||+++|||++|+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9976521110 01112458999999999999999999999999999999999999997532211
Q ss_pred CCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhhhh
Q 038707 528 DKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRP-TMKEVTNELGGIR 593 (597)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~evl~~L~~l~ 593 (597)
. . ....+ .++.. .......+..+.+++.+||+.||++|| +++++++.|+.+.
T Consensus 239 i---~--~~~~i--------~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 239 I---S--YRDVI--------LSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred h---h--hhhhc--------cChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0 00000 00100 011124456788999999999999995 6777888777653
No 195
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.8e-37 Score=308.35 Aligned_cols=240 Identities=24% Similarity=0.407 Sum_probs=191.6
Q ss_pred CcccccCceEEEEEEecC-------------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 323 RILGQGGQGTVYKGMLTD-------------GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~-------------~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
+.||+|+||.||+|.... ...|++|.+..........+.+|+.+++.++||||+++++++.+....+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358899877655666678899999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc-------EEEee
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR-------AKVSD 462 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~-------~kl~D 462 (597)
+||||+++++|..++.... .++++..++.++.||++||+|||+.+ |+||||||+|||++.++. +|++|
T Consensus 81 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 9999999999999987542 34899999999999999999999999 999999999999987654 89999
Q ss_pred ccccccccCCCceeeecccccccccCccccc-cCCCCcccceeehHHHHHHHH-hCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 463 FGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQ-SSQFTEKSDVYSFGVVLVEIL-TGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 463 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlG~il~ell-~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
||++...... ....++..|+|||.+. ...++.++||||||+++|||+ .|..||......+. ....
T Consensus 156 ~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~~~~- 222 (262)
T cd05077 156 PGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------ERFY- 222 (262)
T ss_pred CCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------HHHH-
Confidence 9998654322 2234778899999886 467899999999999999998 48888764332210 0000
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.+.. . .......++.+|+.+||+.||.+||++.+|++.|+
T Consensus 223 ~~~~-~---------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 223 EGQC-M---------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hcCc-c---------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1100 0 01112356889999999999999999999999874
No 196
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.8e-37 Score=309.21 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=204.4
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++.+++++.....||+|+||.||+|.+. +++.|++|..........+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3445566666779999999999999965 578899998877666677889999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeeccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGTSRSV 469 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~~~ 469 (597)
|+||+++++|.+++.........++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 9999999999999986432212388889999999999999999999 999999999999976 679999999998765
Q ss_pred cCCCceeeecccccccccCccccccC--CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQSS--QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
..... ......+++.|+|||++... .++.++||||||+++|+|++|+.||........ ..+.....
T Consensus 160 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~-------- 227 (268)
T cd06624 160 AGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMF-------- 227 (268)
T ss_pred ccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhh--------
Confidence 32221 22234578999999998654 378999999999999999999999865322110 00000000
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+....+++.+|+.+||+.+|++|||+.|+++.
T Consensus 228 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 ---KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ---ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00111123345668899999999999999999999863
No 197
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.1e-37 Score=313.13 Aligned_cols=250 Identities=28% Similarity=0.350 Sum_probs=200.8
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
|+..+.||+|+||.||++... +++.+|+|.+.... ......+.+|+.++++++|++|+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677789999999999999976 68999999875422 22345678899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 99999999986542 234899999999999999999999999 99999999999999999999999999876532221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||.......... ....... ....
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~---~~~~~~~----------~~~~ 222 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE---EVERLVK----------EVQE 222 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH---HHHhhhh----------hhhh
Confidence 223468999999999998899999999999999999999999997543221100 0111000 0011
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPT-----MKEVTN 587 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~evl~ 587 (597)
......+..+.+|+.+||+.||++||| ++|+++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 112234456889999999999999999 788876
No 198
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.9e-38 Score=322.41 Aligned_cols=242 Identities=26% Similarity=0.372 Sum_probs=192.0
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHH-HHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVV-ILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|+||+||++... +|+.+|+|.+... ......++..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999975 6899999987642 2233445566655 56779999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 153 (325)
T cd05604 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTT 153 (325)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCc
Confidence 9999988753 34899999999999999999999999 999999999999999999999999998754222 1223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+ .+ ..+..... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~-~~~~~~~~----------~~~ 216 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MY-DNILHKPL----------VLR 216 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HH-HHHHcCCc----------cCC
Confidence 34568999999999999999999999999999999999999997543211 11 11111111 011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+..+.+++.+||+.+|.+||++++.+++
T Consensus 217 ~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 217 PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 2234567899999999999999988644433
No 199
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.4e-37 Score=310.53 Aligned_cols=256 Identities=27% Similarity=0.500 Sum_probs=206.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR----IVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~----~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
.+|++.+.||+|+||+||+|.+. +++ .+|+|...... .....++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45788899999999999999964 333 68999876543 4456789999999999999999999999987 78899
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+++|+|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999986433 4899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCceee-ecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTHLT-TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
....... ....++..|+|||.+....++.++||||||++++||++ |+.||......+ +.+.+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~--- 230 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-------IPDLLEKGERL--- 230 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHhCCCCC---
Confidence 3322211 11223568999999988889999999999999999998 999997543222 22222222111
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
..+......+.+++.+||..+|++||++.++++.|+++.+
T Consensus 231 ------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 ------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111233457899999999999999999999999998754
No 200
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=297.70 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=205.1
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
.++|++-+.||+|.|+.|++.... +|+.+|+|.+.. ......+++.+|+.|-+.|+||||++|.+...+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467888889999999999998864 688888886543 33447789999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC---CCcEEEeeccccccc
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD---KYRAKVSDFGTSRSV 469 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfgl~~~~ 469 (597)
|+|.+++|..-+-.. ...++..+...++||++||.|+|..+ |+|||+||+|+|+.. ..-+||+|||++...
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999997766543 34788899999999999999999999 999999999999943 446999999999887
Q ss_pred cCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
. ....-....|||+|||||++...+|+..+|||+-||+||-||.|.+||.+.+... ..+.+..+.+.
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-------lye~I~~g~yd---- 230 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-------LYEQIKAGAYD---- 230 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-------HHHHHhccccC----
Confidence 6 3344556779999999999999999999999999999999999999997533221 22222222221
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.........++..+|+++||..||.+|.|+.|.|+
T Consensus 231 --~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 --YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred --CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111112345567889999999999999999998875
No 201
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.9e-37 Score=310.59 Aligned_cols=250 Identities=26% Similarity=0.361 Sum_probs=202.4
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
|++.+.||+|+||.||+|... ++..+++|..........+.+.+|+++++.++||||+++++++...+..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 677789999999999999976 4788999988776677778899999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.+. ..++++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||++....... ...
T Consensus 87 ~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~ 160 (282)
T cd06643 87 GAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRR 160 (282)
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc-ccc
Confidence 9999988753 235899999999999999999999999 9999999999999999999999999987653221 222
Q ss_pred ecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 478 TKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
....++..|+|||++. ...++.++||||||+++|||++|+.||......+ .......... ...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~~-~~~----- 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSEP-PTL----- 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH------HHHHHhhcCC-CCC-----
Confidence 3345889999999974 3457889999999999999999999986533211 1111111100 000
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+...+.++.+||.+||+.+|.+||++.++++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112344678999999999999999999998753
No 202
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.1e-37 Score=319.34 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=198.9
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC----
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETE---- 386 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 386 (597)
...++|++.+.||+|+||.||++... +++.||+|++.. ........+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999975 589999998753 23445677889999999999999999999986543
Q ss_pred --cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 387 --VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 387 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
..++||||+++ +|.+.++. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999965 67666643 2788999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc-
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR- 543 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 543 (597)
+++..... .......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||...+..+ .............
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~ 243 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID---QWNKVIEQLGTPSA 243 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCcH
Confidence 99754322 22334568999999999999999999999999999999999999997643211 0000000000000
Q ss_pred ---------hhhhhhH--------------Hh----hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 544 ---------LFEALDA--------------RV----LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 544 ---------~~~~l~~--------------~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....... .. ...........+.+|+.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 00 000011124568899999999999999999999874
No 203
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.9e-37 Score=320.29 Aligned_cols=255 Identities=22% Similarity=0.316 Sum_probs=200.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||+|.+.. ........+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999976 588999998753 22334556889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999998642 24899999999999999999999999 999999999999999999999999999766543
Q ss_pred CceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.........||+.|+|||++.. ..++.++||||||++||+|++|+.||......+ .............
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~~- 228 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEERFQ- 228 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCccc-
Confidence 3333334569999999999865 467899999999999999999999997533211 1111111110000
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKM--RPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~evl~~ 588 (597)
+ .......++++.+|+.+||..++.+ |++++++++.
T Consensus 229 ~-----p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 F-----PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred C-----CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 0001223567889999999866544 4678887754
No 204
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=305.78 Aligned_cols=246 Identities=25% Similarity=0.304 Sum_probs=202.5
Q ss_pred cCCccCCcccccCceEEEEEEecC-CcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+.|++.+.||+|.-|+||++.+.+ +..+|+|.+.. .......+...|-+||+.++||.++.|+..++.++..+|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456677899999999999999874 68999998764 23444566778999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||++||+|..+++++. ...+++..+.-++.+|+-||+|||..| ||.|||||+||||.++|++-|+||.|+......
T Consensus 157 eyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999998874 446999999999999999999999999 999999999999999999999999987543210
Q ss_pred C---------------------------------c----------------------eeeecccccccccCccccccCCC
Q 038707 473 Q---------------------------------T----------------------HLTTKVQGTFGYVDPEYFQSSQF 497 (597)
Q Consensus 473 ~---------------------------------~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 497 (597)
. . ......+||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 00112358999999999999999
Q ss_pred CcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCC
Q 038707 498 TEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGK 577 (597)
Q Consensus 498 ~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 577 (597)
+.+.|+|+||++|||||.|+.||.+.+.++. + ..++.+.+........+..+.+||++.|.+||.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T------l---------~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET------L---------RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh------H---------HHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence 9999999999999999999999998765541 1 122222222222235566789999999999999
Q ss_pred CCCC
Q 038707 578 MRPT 581 (597)
Q Consensus 578 ~RPt 581 (597)
+|..
T Consensus 378 kRlg 381 (459)
T KOG0610|consen 378 KRLG 381 (459)
T ss_pred hhhc
Confidence 9988
No 205
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.6e-37 Score=319.44 Aligned_cols=255 Identities=21% Similarity=0.308 Sum_probs=200.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.++||+|+||+||++..+ +++.+|+|.+.. ........+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46889999999999999999976 478899998753 22333456889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999998642 24899999999999999999999999 999999999999999999999999998765433
Q ss_pred CceeeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.........||+.|+|||++. ...++.++||||||++||||++|+.||......+ ..............
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~~~ 229 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERFQF 229 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCCccccC
Confidence 333334456999999999986 3468899999999999999999999997533211 11111111110000
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKM--RPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~evl~~ 588 (597)
.......+.++.+|+.+||..++.+ |++++++++.
T Consensus 230 ------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 230 ------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0111234566889999998665444 6899998876
No 206
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=9.1e-38 Score=318.42 Aligned_cols=261 Identities=24% Similarity=0.376 Sum_probs=200.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|.+.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46889999999999999999976 58899999876433 23345678999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++ ++|.+++.... ..+++..+..++.||++||.|||+.+ |+|+||||+|||+++++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 58999887643 24889999999999999999999999 99999999999999999999999999876433221
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh---cCchhhhhh-
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN---ENRLFEALD- 549 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~- 549 (597)
......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+. ...+..... ...+...++
T Consensus 160 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 160 -TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred -cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCChhhchhhhcc
Confidence 1223346889999998765 4578999999999999999999999976543221 111111100 000000000
Q ss_pred --------HHh----hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 550 --------ARV----LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 550 --------~~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.. ........+..+.+||.+||+.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 00111223556889999999999999999999987
No 207
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=321.84 Aligned_cols=253 Identities=25% Similarity=0.429 Sum_probs=213.7
Q ss_pred ccCCcccccCceEEEEEEecC--C--cEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 320 NANRILGQGGQGTVYKGMLTD--G--RIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~--~--~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
.+.++||+|.||.|++|.|+. | ..||||.++..... ...+|++|+.+|.+|+|+|+++|||+..+ ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 345789999999999999863 4 36899998876555 67899999999999999999999999998 777899999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++.|+|.+.|++ ..+..|....+-.++.|||.||.||.+++ +|||||..+|+||-....+||+||||.+.+...+.
T Consensus 192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999998 34456888889999999999999999999 99999999999999999999999999998764433
Q ss_pred e-eee-cccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 475 H-LTT-KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 475 ~-~~~-~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
. .+. ...-...|.|||.+....++.++|||+|||+||||++ |..||.+..... +.+.+|..
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~iD~~ 331 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNIDAG 331 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhcccc
Confidence 3 222 2334668999999999999999999999999999999 889997754322 33445544
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
..-..+..+++++.++++.||..+|.+|||+..|.+.+-..+
T Consensus 332 erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 332 ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 444556788999999999999999999999999986654433
No 208
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.6e-37 Score=310.63 Aligned_cols=251 Identities=26% Similarity=0.367 Sum_probs=203.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|++.+.||+|+||.||+|... +++.+++|..........+.+.+|+.+++.++||||+++++.+......++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999976 48899999988777777888999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|..++.+.. ..+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 165 (292)
T cd06644 92 PGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-Q 165 (292)
T ss_pred CCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc-c
Confidence 9999999886543 34899999999999999999999998 9999999999999999999999999886543221 1
Q ss_pred eeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 476 LTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
......+++.|+|||++. ...++.++||||||+++|||++|+.||...... ........ .....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~~-~~~~~---- 234 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAK-SEPPT---- 234 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH------HHHHHHhc-CCCcc----
Confidence 123345788999999984 345788999999999999999999998653321 11111111 10000
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+...+.++.+++.+||+.+|++||++.++++
T Consensus 235 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 ---LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0112234456889999999999999999999976
No 209
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.1e-37 Score=308.31 Aligned_cols=250 Identities=26% Similarity=0.488 Sum_probs=202.4
Q ss_pred CCccCCcccccCceEEEEEEecCCcEEEEEEccccC------hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVD------ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+|.+.+.||+|+||+||+|...+++.+|+|.+.... ......+.+|+.++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478889999999999999998889999999876422 22346688999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
+||+++++|.+++.+.. ++++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997642 4889999999999999999999999 99999999999999999999999999876432
Q ss_pred CC-----ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 472 DQ-----THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 472 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
.. ........++..|+|||.+.+..++.++||||||+++++|++|+.||...+..+ . ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~-~~~~~~~~~~~- 227 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-----A-MFYIGAHRGLM- 227 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-----H-HHHhhhccCCC-
Confidence 11 111223458889999999998889999999999999999999999996533211 0 11111000000
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.......+.++.++|++||+.+|++||++.++++
T Consensus 228 -------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 -------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1112334566889999999999999999999975
No 210
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.2e-37 Score=309.83 Aligned_cols=247 Identities=28% Similarity=0.424 Sum_probs=204.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||.|++|.||+|... +++.+|+|...... ......+.+|+.+++.++|+||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999976 58899999876543 44567789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++... ++++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 9999999999764 5899999999999999999999999 9999999999999999999999999997765332
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
.......+++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+..... .
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-------~~~~~~~~~~---------~ 216 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-------VLFLIPKNNP---------P 216 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-------HHHHhhhcCC---------C
Confidence 22233457889999999998889999999999999999999999996543211 1111111100 0
Q ss_pred hhhHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 555 EAKKE-EIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 555 ~~~~~-~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..... .+..+.+++.+||..+|++|||++++++
T Consensus 217 ~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 217 SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11111 4567889999999999999999999976
No 211
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.7e-37 Score=319.44 Aligned_cols=237 Identities=24% Similarity=0.353 Sum_probs=188.9
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHH-HHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVV-ILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
++||+|+||.||++... +++.||+|.+... ......++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5889999987532 2223345555554 67889999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETT 153 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccc
Confidence 9999988753 34889999999999999999999999 9999999999999999999999999987532222 223
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+..+ ....+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~~~----------~~~ 216 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-------MYDNILHKPL----------QLP 216 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-------HHHHHhcCCC----------CCC
Confidence 34568999999999998899999999999999999999999997532111 1111111110 112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMK 583 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~ 583 (597)
......+.+++.+||+.+|.+||++.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 23445688999999999999999764
No 212
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.2e-37 Score=305.70 Aligned_cols=253 Identities=25% Similarity=0.390 Sum_probs=193.2
Q ss_pred CcccccCceEEEEEEecC---CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLTD---GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~---~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 469999999999998643 4679999876543 334457899999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 399 TLYQYIHNQIE--EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 399 sL~~~l~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+|.++++.... ....++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 234677888899999999999999999 9999999999999999999999999987543322211
Q ss_pred -eecccccccccCccccccC-------CCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 477 -TTKVQGTFGYVDPEYFQSS-------QFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 477 -~~~~~gt~~y~aPE~~~~~-------~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.....++..|+|||++... .++.++||||||+++|||++ |+.||......+ .. ...+. +.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~---~~~~~-~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VL---TYTVR-EQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HH---HHHhh-cccCCC
Confidence 1234467889999998642 35789999999999999996 999996543222 10 01111 111111
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
..+.. .....+.+.+++..|+ .+|++|||++||+..|+
T Consensus 231 ~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111 1123345778999999 68999999999999875
No 213
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.5e-37 Score=318.26 Aligned_cols=241 Identities=27% Similarity=0.387 Sum_probs=195.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 392 (597)
+|+..+.||+|+||+||++... +++.||+|.+... .....+.+..|+.++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3778899999999999999976 6899999987632 2334567888999998886 577888999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.... .+++.++..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999997543 4899999999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~~-------- 218 (323)
T cd05615 155 G-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHNV-------- 218 (323)
T ss_pred C-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC--------
Confidence 2 12234458999999999998899999999999999999999999997543211 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
..+...+.++.+++.+||+.+|.+|++.
T Consensus 219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 --SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1122334567899999999999999985
No 214
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-37 Score=311.92 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=200.1
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeC------
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLET------ 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 385 (597)
.+++.|++.+.||+|+||.||+|... +++.+|+|...... ....++.+|+.+++++ +|+||+++++++.+.
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677888999999999999999976 58899999876433 3446788999999998 699999999998763
Q ss_pred CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
...+++|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 35789999999999999998642 335899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
+....... .......|+..|+|||++. ...++.++||||||+++|||++|+.||....... .. ....
T Consensus 158 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-----~~--~~~~ 229 (272)
T cd06637 158 SAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----AL--FLIP 229 (272)
T ss_pred ceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-----HH--HHHh
Confidence 87653222 1233456889999999985 3457889999999999999999999996432111 00 0111
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...... ......+..+.+|+.+||..+|.+|||+.++++
T Consensus 230 ~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPR--------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCC--------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 110000 011223456889999999999999999999975
No 215
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-37 Score=314.58 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=194.8
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCccceeeeEEEeC-----C
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQI---NHRNIVKLLGCCLET-----E 386 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 386 (597)
+|++.+.||+|+||+||+|... +++.||+|.++... ......+.+|+.+++.+ +||||+++++++.+. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999976 68999999876432 22234456677777665 799999999988653 3
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..+++|||++ ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 5789999997 58989887643 234899999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC---c
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN---R 543 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~ 543 (597)
+...... ......++..|+|||++.+..++.++||||||+++|+|++|++||......+ ............ .
T Consensus 156 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~ 230 (288)
T cd07863 156 RIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDD 230 (288)
T ss_pred ccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHHHHhCCCChhh
Confidence 7654221 2233457899999999988899999999999999999999999986543221 111111111000 0
Q ss_pred hhhh----------hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 544 LFEA----------LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 544 ~~~~----------l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+... .............++.+.+|+.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 0000011112234567889999999999999999999985
No 216
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.3e-37 Score=305.52 Aligned_cols=251 Identities=30% Similarity=0.417 Sum_probs=206.7
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|+..+.||+|+||.||.+... +++.+++|.+... ......++.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999999999865 5889999986643 355567889999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++.++..++.|++.+|.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999998653 345899999999999999999999999 99999999999999999999999999876643332
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......+++.|+|||.+.+..++.++||||||+++++|++|..||......+ .. ..+..+...
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~-~~~~~~~~~--------- 219 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LV-VKIVQGNYT--------- 219 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HH-HHHHcCCCC---------
Confidence 2334558899999999988889999999999999999999999986432211 11 111111111
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
......+.++.+++.+||+.+|++||+++++++.+
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11133456688999999999999999999998753
No 217
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-37 Score=332.13 Aligned_cols=259 Identities=23% Similarity=0.343 Sum_probs=193.4
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--------C
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLET--------E 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 386 (597)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+|++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999975 68999999875321 2345799999999999999999887532 1
Q ss_pred cceEEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeecc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFG 464 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfg 464 (597)
..++||||+++ +|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 35689999974 7877775422 2345899999999999999999999999 99999999999998665 69999999
Q ss_pred ccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
+++....... .....+|+.|+|||++.+ ..++.++||||||++||||++|.+||.+....+. .....+......
T Consensus 217 la~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~---~~~i~~~~~~p~ 291 (440)
T PTZ00036 217 SAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ---LVRIIQVLGTPT 291 (440)
T ss_pred cchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCC
Confidence 9986543222 223468999999999765 4689999999999999999999999976433211 111111111000
Q ss_pred hh---------------hhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 544 LF---------------EALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 544 ~~---------------~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.. ......+....+...+.++.+||.+||+.||.+|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 000001111112234567899999999999999999999984
No 218
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.3e-37 Score=306.44 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=206.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|++.+.||+|++|.||++... +++.+++|..........+.+.+|+.++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57889999999999999999975 57889999988766667788999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ..+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.+||+|||++....... .
T Consensus 83 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 156 (262)
T cd06613 83 GGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-A 156 (262)
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh-h
Confidence 9999999987642 34899999999999999999999999 9999999999999999999999999987654321 1
Q ss_pred eeecccccccccCccccccC---CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 476 LTTKVQGTFGYVDPEYFQSS---QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
......++..|+|||.+... .++.++||||||+++|+|++|+.||......+. .. ....... .+..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~------~~-~~~~~~~----~~~~ 225 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA------LF-LISKSNF----PPPK 225 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH------HH-HHHhccC----CCcc
Confidence 22334578899999998776 889999999999999999999999975432211 00 0111100 0000
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.......+.++.+++.+||+.+|.+|||+.+|++
T Consensus 226 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 -LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0112344567899999999999999999999975
No 219
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-37 Score=309.08 Aligned_cols=252 Identities=26% Similarity=0.408 Sum_probs=202.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++.+.+.+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46888889999999999999975 58899999987665566677889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... .+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~ 161 (267)
T cd06645 89 GGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IA 161 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCc-cc
Confidence 9999999987543 4899999999999999999999999 999999999999999999999999998765322 12
Q ss_pred eeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 476 LTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
......|+..|+|||++. ...++.++||||||+++|+|++|+.||........ ....... ... +..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~~~-~~~----~~~ 230 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMTKS-NFQ----PPK 230 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhhcc-CCC----CCc
Confidence 223446899999999874 45688999999999999999999999864332211 0011111 100 000
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
... ....+..+.+++.+||+.+|++||++++|++
T Consensus 231 ~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000 1123456889999999999999999999875
No 220
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-37 Score=314.34 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=205.9
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
.++|.+.+.||+|++|.||++... +++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 367999999999999999999964 6899999998766666667889999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.+. .+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999998653 3889999999999999999999999 99999999999999999999999999876533221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... .....+ .. ..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~-~~-------~~ 235 (297)
T cd06656 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNG-TP-------EL 235 (297)
T ss_pred -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCC-CC-------CC
Confidence 1233457889999999998889999999999999999999999996543221100 000000 00 00
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...+..+.+|+.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112334456789999999999999999999987
No 221
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=320.76 Aligned_cols=244 Identities=27% Similarity=0.415 Sum_probs=203.5
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
|.-++.||.|+||.||-+.+. +.+.||||++.... .+..++++.|+..|++++|||++.+-|||......||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 556778999999999999965 68899999987543 34567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
| -|+-.|++.-+. +++.+.++..|..+.++||+|||+++ .||||||..|||+++.|.|||+|||.+.....
T Consensus 108 C-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 108 C-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred H-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 9 568888887653 46999999999999999999999999 99999999999999999999999999865432
Q ss_pred eeeecccccccccCcccc---ccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 475 HLTTKVQGTFGYVDPEYF---QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
...+.|||.|||||++ ..+.|+-|+||||||++..||.-.++|+..++.-. +...+..+.- |.
T Consensus 179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-------ALYHIAQNes-----Pt 244 (948)
T KOG0577|consen 179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNES-----PT 244 (948)
T ss_pred --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-------HHHHHHhcCC-----CC
Confidence 3456799999999986 45789999999999999999999999987554211 1222211111 11
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+ ...+.+..+..|+..||+.-|.+|||..+++..
T Consensus 245 L---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 245 L---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred C---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 1 146778889999999999999999999998764
No 222
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.2e-37 Score=305.40 Aligned_cols=249 Identities=27% Similarity=0.423 Sum_probs=204.7
Q ss_pred cCCccCCcccccCceEEEEEEecC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|+..+.||+|++|.||+|...+ ++.+++|.+..... .+++.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578899999999999999999864 78999998865322 678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999997533 35899999999999999999999999 99999999999999999999999999876543321
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......++..|+|||++.+..++.++||||||+++|+|++|+.||........ ...+..... . ...
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~-~------~~~ 220 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-------IFMIPNKPP-P------TLS 220 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-------hhhhccCCC-C------CCC
Confidence 22334478899999999988999999999999999999999999975432211 000000000 0 001
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+......+.+++.+||+.+|++|||++||++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 12234467899999999999999999999986
No 223
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.5e-37 Score=307.36 Aligned_cols=248 Identities=27% Similarity=0.433 Sum_probs=204.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..|+..+.||+|+||.||+|.+. +++.||||...... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 34777889999999999999976 58899999876432 45567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++... ++++.++..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 84 LGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 9999999998643 4889999999999999999999998 99999999999999999999999999976543221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......++..|+|||++.+..++.++|+||||+++|||++|+.||........ ...+..+ ...
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------~~~~~~~---------~~~ 219 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-------LFLIPKN---------NPP 219 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-------hhhhhcC---------CCC
Confidence 22334578899999999888899999999999999999999999875432211 0011111 011
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+..+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 2234456778999999999999999999999775
No 224
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.6e-37 Score=306.68 Aligned_cols=248 Identities=29% Similarity=0.517 Sum_probs=200.9
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh---------hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE---------TNVEQFINEVVILSQINHRNIVKLLGCCLETEV 387 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 387 (597)
+|.+.+.||+|++|.||+|... +++.+|+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999975 588999997654322 123568899999999999999999999999999
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.+++|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence 99999999999999999764 24889999999999999999999999 9999999999999999999999999987
Q ss_pred cccCCCce-----eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 468 SVMVDQTH-----LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 468 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .. ... +...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~-~~~-~~~~ 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-----QA-IFK-IGEN 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-----HH-HHH-Hhcc
Confidence 66422111 112245788999999999888999999999999999999999999753211 10 111 1110
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+...+..+.+++.+||+.+|.+||++.+|++
T Consensus 228 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 ---------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 011122334567889999999999999999999986
No 225
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=310.76 Aligned_cols=248 Identities=25% Similarity=0.389 Sum_probs=211.2
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
.+-|.+.+.||+|.|+.|-+|++- +|+.||||++... +......+.+|+.-|+.++|||||+||++......+|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 355888899999999999999853 7999999987653 3445678999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe-CCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL-DDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll-~~~~~~kl~Dfgl~~~~~~ 471 (597)
|.=++|+|++||.++..+ +.++...+++.||+.|+.|+|+.+ ++||||||+|+.+ ..-|-+||+|||++..+..
T Consensus 97 ELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999999987655 999999999999999999999999 9999999999877 5568899999999977653
Q ss_pred CCceeeecccccccccCccccccCCCC-cccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFT-EKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
. ...+..+|.+.|.|||++.+..|+ ++.||||||||||.|++|++||+..+..|. ..+ ++|-
T Consensus 172 G--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------LTm--------ImDC 234 (864)
T KOG4717|consen 172 G--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------LTM--------IMDC 234 (864)
T ss_pred c--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------hhh--------hhcc
Confidence 3 335567899999999999998876 689999999999999999999987665552 111 2222
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+ ..+...+.+..+||..||..||.+|.+.+||..
T Consensus 235 KY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 235 KY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22 235666778899999999999999999999875
No 226
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-37 Score=310.67 Aligned_cols=253 Identities=26% Similarity=0.408 Sum_probs=203.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|+||.||++... +++.+|+|.+... ......++.+|+.++++++|+||+++++.+...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999976 6899999987643 344567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++........+++..+..++.|+++||.|||+ .+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 9999999998864333458999999999999999999997 46 9999999999999999999999999987653221
Q ss_pred ceeeecccccccccCccccccC------CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSS------QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.....+++.|+|||.+.+. .++.++||||||+++|+|++|+.||....... ..... ..+..+.
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~-~~~~~~~---- 226 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQL-SAIVDGD---- 226 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHH-HHHhhcC----
Confidence 2233478899999998543 35889999999999999999999996532211 11111 1111111
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+...+.++.+|+.+||+.+|++||++.++++.
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 -----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 111223456678899999999999999999999873
No 227
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.6e-37 Score=303.72 Aligned_cols=238 Identities=24% Similarity=0.460 Sum_probs=191.4
Q ss_pred CcccccCceEEEEEEecC-C----------cEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 323 RILGQGGQGTVYKGMLTD-G----------RIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~-~----------~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+.||+|+||.||+|.+.+ + ..+++|........ ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 469999999999999864 3 25778876644333 6789999999999999999999999988 788999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-------cEEEeecc
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-------RAKVSDFG 464 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-------~~kl~Dfg 464 (597)
|||+++++|.+++..... .+++..+..++.||+.||+|||+.+ |+|+||||+|||++.++ .+||+|||
T Consensus 79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999999986532 5899999999999999999999999 99999999999999887 79999999
Q ss_pred ccccccCCCceeeecccccccccCccccccC--CCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSS--QFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
++..... .....++..|+|||++... .++.++||||||+++|+|++ |..||......+... ....
T Consensus 154 ~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-------~~~~ 221 (259)
T cd05037 154 IPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-------FYQD 221 (259)
T ss_pred ccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-------HHhc
Confidence 9876543 2223466789999998776 78999999999999999999 577776554222110 1111
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.... .......+.+++.+||..+|.+|||+.+|++.|+
T Consensus 222 ~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 QHRL-----------PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCC-----------CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1000 0111157889999999999999999999999874
No 228
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.6e-37 Score=304.79 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=202.6
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC-CcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLET-EVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 393 (597)
+|++.+.||+|++|.||++... +++.+|+|++... .....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999976 5789999987642 334556789999999999999999999987644 46789999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|.+++.... ..++++.+++.++.|++.||++||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999998642 345899999999999999999999999 9999999999999999999999999997654322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
. ......+++.|+|||++.+..++.++||||||+++++|++|+.||...+.. .... .+..+..
T Consensus 157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~-~~~~~~~--------- 219 (257)
T cd08223 157 D-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVY-RIIEGKL--------- 219 (257)
T ss_pred C-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHH-HHHhcCC---------
Confidence 2 223445789999999999989999999999999999999999998643211 1111 1111111
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.......+..+.+++.+||+.+|++|||+.++++.
T Consensus 220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11223455678999999999999999999999863
No 229
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.6e-37 Score=308.87 Aligned_cols=239 Identities=23% Similarity=0.382 Sum_probs=189.7
Q ss_pred cccccCceEEEEEEecC-------------------------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcccee
Q 038707 324 ILGQGGQGTVYKGMLTD-------------------------GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKL 378 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~-------------------------~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 378 (597)
.||+|+||.||+|.+.. ...|++|.+.........++.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13588898876555556789999999999999999999
Q ss_pred eeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC--
Q 038707 379 LGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-- 456 (597)
Q Consensus 379 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-- 456 (597)
++++.+....++||||+++|+|..++.+.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 999999999999999999999999987532 34889999999999999999999998 99999999999997643
Q ss_pred -----cEEEeeccccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHH-hCCCCCCCCCCcCCC
Q 038707 457 -----RAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEIL-TGQKPIRAINTDEDK 529 (597)
Q Consensus 457 -----~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell-~g~~p~~~~~~~~~~ 529 (597)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......+.
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~- 230 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK- 230 (274)
T ss_pred cCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence 3899999987543221 12346788999998865 56899999999999999995 69999875433221
Q ss_pred cHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 530 SLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.. ...... ..+......+.++|.+||+.+|++|||+.+|++.|+
T Consensus 231 --~~----~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 --ER----FYEKKH-----------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --HH----HHHhcc-----------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 10 110000 001112245889999999999999999999999874
No 230
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.5e-37 Score=308.49 Aligned_cols=250 Identities=32% Similarity=0.499 Sum_probs=199.0
Q ss_pred CcccccCceEEEEEEecC-------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 323 RILGQGGQGTVYKGMLTD-------GRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~-------~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+.||+|+||.||+|...+ ++.+|||...... .....++.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 469999999999998642 2578999765432 34567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-----cEEEeeccc
Q 038707 395 IPNGTLYQYIHNQIE----EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-----RAKVSDFGT 465 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-----~~kl~Dfgl 465 (597)
+++++|.+++.+... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.+. .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999976321 234789999999999999999999998 99999999999999877 899999999
Q ss_pred cccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 466 SRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 466 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
+......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-------VLQHVTAGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-------HHHHHhcCC
Confidence 8765432211 1122335678999999999999999999999999999998 999986432111 111111111
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
. .......+..+.+++.+||+.+|.+||++++|++.|++
T Consensus 231 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 R---------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c---------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 11123345678999999999999999999999999864
No 231
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=324.05 Aligned_cols=244 Identities=27% Similarity=0.438 Sum_probs=207.4
Q ss_pred cccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhh
Q 038707 324 ILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQ 402 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 402 (597)
+||+|.||+||.|++. +...+|||.+...+....+-+.+||.+.++|+|.|||+++|++.+++..-|.||-+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999976 467899999988888888899999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC-CCCcEEEeeccccccccCCCceeeec
Q 038707 403 YIHNQIEEFPI--TWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGTSRSVMVDQTHLTTK 479 (597)
Q Consensus 403 ~l~~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~kl~Dfgl~~~~~~~~~~~~~~ 479 (597)
+|+.. -+|+ ++..+-.+.+||++||.|||... |+|||||-+|+|++ -.|.+||+|||-++.+. .-.+.+..
T Consensus 662 LLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TET 735 (1226)
T KOG4279|consen 662 LLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTET 735 (1226)
T ss_pred HHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhc-cCCccccc
Confidence 99863 4456 78889999999999999999999 99999999999995 57899999999998764 34455667
Q ss_pred ccccccccCccccccC--CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 480 VQGTFGYVDPEYFQSS--QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 480 ~~gt~~y~aPE~~~~~--~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
..||.-|||||++..+ .|+.++|||||||++.||.||++||....... ..+.+-|.. ......+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--------AAMFkVGmy------KvHP~iP 801 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--------AAMFKVGMY------KVHPPIP 801 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--------Hhhhhhcce------ecCCCCc
Confidence 7899999999998764 58999999999999999999999997544322 111111111 1223345
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.+.+...+|.+|..++|.+||+++++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 777788999999999999999999999975
No 232
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.2e-37 Score=325.71 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=197.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||+||++... +++.||||.+... .......+.+|+.++.+++||||+++++.+.+.+..+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 5899999987632 2344567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++|+|.+++.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997542 4899999999999999999999999 999999999999999999999999998654211
Q ss_pred Cc----------------------------------eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCC
Q 038707 473 QT----------------------------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 518 (597)
Q Consensus 473 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~ 518 (597)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 00113468999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 038707 519 PIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT---MKEVTN 587 (597)
Q Consensus 519 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~evl~ 587 (597)
||......+ .. ..+...... +........++++.+||.+++ .+|.+|++ +.++++
T Consensus 235 Pf~~~~~~~------~~-~~i~~~~~~------~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 235 PFCSETPQE------TY-RKVMNWKET------LVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCHHH------HH-HHHHcCCCc------eecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 997543322 11 111110000 000001123456788898877 49999985 566654
No 233
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.9e-37 Score=304.45 Aligned_cols=251 Identities=32% Similarity=0.527 Sum_probs=204.2
Q ss_pred CccCCcccccCceEEEEEEecC-----CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 319 YNANRILGQGGQGTVYKGMLTD-----GRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~-----~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+++.+.||+|+||.||++...+ +..||+|........ ....+.+|+..+.+++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999763 388999998754433 6778999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999999976432 12899999999999999999999999 999999999999999999999999999876544
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.........+++.|+|||.+.+..++.++||||||+++++|++ |+.||......+ ....+..+...
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~------ 223 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-------VLEYLKKGYRL------ 223 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCCCC------
Confidence 3322222336789999999988889999999999999999998 788886522111 11122221111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
......+.++.+++.+||..+|++|||+.++++.|
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11222456789999999999999999999999865
No 234
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.6e-37 Score=310.72 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=200.2
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
|+..+.||+|+||+||++.+. +++.+|+|.+.... ......+.+|+.++++++|+||+++++.+.+.+..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999975 68899999876422 23345678899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 99999999987542 235999999999999999999999999 9999999999999999999999999987653221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......|+..|+|||++.+..++.++|+||||+++|+|++|+.||......... ........... .
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~---~~~~~~~~~~~----------~ 222 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR---EEVDRRVLETE----------E 222 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhhhccc----------c
Confidence 123346899999999998889999999999999999999999999754322110 01111111100 0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPT-----MKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~evl~~ 588 (597)
......+..+.+|+.+||+.||++||+ +.++++.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 112233456789999999999999999 6666653
No 235
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.4e-37 Score=321.68 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=199.0
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC----
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE---- 386 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 386 (597)
...++|++.+.||+|+||.||++... .++.||||++... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35578999999999999999999975 5889999987642 3345577889999999999999999999986443
Q ss_pred --cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 387 --VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 387 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
..++||||+++ +|.+.+.. .+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 46899999965 67776653 2889999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN-- 542 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~-- 542 (597)
+++..... .......+|+.|+|||++.+..++.++||||||+++|+|++|+.||......+. ...........
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 239 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ---WNKVIEQLGTPCP 239 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCH
Confidence 99764322 223345689999999999988999999999999999999999999975432111 00000000000
Q ss_pred --------chhhhhh----------HHhh--------hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 543 --------RLFEALD----------ARVL--------KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 543 --------~~~~~l~----------~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....++ +... ..........+.+||.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 0000 00011224568899999999999999999999974
No 236
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.9e-37 Score=308.94 Aligned_cols=252 Identities=27% Similarity=0.365 Sum_probs=205.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|++.+.||+|++|.||++.+. +++.+|+|..........+.+.+|+.++++++||||+++++.+.+....++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 56888999999999999999975 68899999988777777788999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++....... .
T Consensus 85 ~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (280)
T cd06611 85 DGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q 158 (280)
T ss_pred CCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence 9999999987643 34899999999999999999999999 9999999999999999999999999887653222 1
Q ss_pred eeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 476 LTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
......+++.|+|||.+. ...++.++||||||+++|+|++|+.||......+ .... +..+...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~------~~~~-~~~~~~~----- 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR------VLLK-ILKSEPP----- 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH------HHHH-HhcCCCC-----
Confidence 223345889999999874 3457889999999999999999999997542211 1111 1111100
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+...+..+.+++.+||+.+|.+||++.++++.
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 --TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 001122344568899999999999999999999864
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.1e-37 Score=310.54 Aligned_cols=246 Identities=27% Similarity=0.451 Sum_probs=201.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.|+..+.||+|+||.||+|.+. +++.||+|...... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3566678999999999999875 57899999876432 445678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++... .+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 85 GGGSALDLLKPG----PLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 999999998642 4899999999999999999999998 99999999999999999999999999876543221
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......++..|+|||.+.+..++.++||||||++++||++|+.|+....... ....+..+. ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~---------~~~ 220 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-------VLFLIPKNS---------PPT 220 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-------HHhhhhcCC---------CCC
Confidence 1223457889999999998889999999999999999999999986433221 111111111 111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 12234566889999999999999999999997
No 238
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.7e-37 Score=314.35 Aligned_cols=197 Identities=24% Similarity=0.397 Sum_probs=161.7
Q ss_pred CCcccccCceEEEEEEec---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEe--CCcceEEEeccC
Q 038707 322 NRILGQGGQGTVYKGMLT---DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLE--TEVPLLVYEFIP 396 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 396 (597)
.++||+|+||+||+|... +++.+|+|.+... .....+.+|+.++++++||||+++++++.+ ....+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999964 4678999987643 223457889999999999999999999865 346789999985
Q ss_pred CCChhhHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe----CCCCcEEEeecccc
Q 038707 397 NGTLYQYIHNQI------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL----DDKYRAKVSDFGTS 466 (597)
Q Consensus 397 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll----~~~~~~kl~Dfgl~ 466 (597)
++|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58888876421 1235899999999999999999999999 9999999999999 45678999999999
Q ss_pred ccccCCCce--eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCC
Q 038707 467 RSVMVDQTH--LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAIN 524 (597)
Q Consensus 467 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~ 524 (597)
+........ ......+|+.|+|||++.+ ..++.++||||||+++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 865432221 2234568999999999876 468999999999999999999999997544
No 239
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-37 Score=323.29 Aligned_cols=261 Identities=23% Similarity=0.321 Sum_probs=200.7
Q ss_pred hcCCccCCcccccCceEEEEEEec---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT---DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
..+|++.+.||+|+||.||++... .++.||+|.+... ....+|+.++++++||||+++++++......+++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3578999987632 23568999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
|++. ++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9995 6888888432 35999999999999999999999999 999999999999999999999999999765433
Q ss_pred Cc-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchh------
Q 038707 473 QT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLF------ 545 (597)
Q Consensus 473 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 545 (597)
.. .......||+.|+|||++....++.++||||||+++|||++|+.||..................+......
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 22 22334569999999999999999999999999999999999999997755433211111111111110000
Q ss_pred ----hhh---hHHhhh--hh-----hHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 546 ----EAL---DARVLK--EA-----KKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 546 ----~~l---~~~~~~--~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+.+ ...... .. ......++.++|.+||+.||++|||+.|++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 000000 00 01224567899999999999999999999864
No 240
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5e-37 Score=304.86 Aligned_cols=247 Identities=28% Similarity=0.491 Sum_probs=200.5
Q ss_pred cCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
++|++.+.||+|+||.||++.. .++.+|+|..... ...+.+.+|+.++++++|||++++++++... ..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588899999999999999975 5788999987643 2346789999999999999999999998654 4799999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 999999998653 335899999999999999999999998 999999999999999999999999998754321
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......+..|+|||.+.+..++.++|+||||+++|+|++ |+.||......+ ....+..+.. ..
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~~ 217 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-------VKECVEKGYR---------ME 217 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-------HHHHHhCCCC---------CC
Confidence 112234567999999988899999999999999999998 999986543222 1122222111 11
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
.....+..+.+++.+||+.+|++||+++++++.|++
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 122345678899999999999999999999999864
No 241
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-37 Score=313.10 Aligned_cols=249 Identities=26% Similarity=0.439 Sum_probs=204.9
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.+|++.+.||.|++|.||+|... +++.|++|.+........+.+.+|+.+++.++||||+++++++.+.+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46889999999999999999964 68999999887655556678899999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++... .+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 99 AGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred CCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence 999999998653 3899999999999999999999999 99999999999999999999999999876543222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||......+. ... +....... ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~------~~~-~~~~~~~~-------~~ 236 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------LYL-IATNGTPE-------LQ 236 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HHhcCCcc-------cC
Confidence 12234588899999999988899999999999999999999999965432111 111 11000000 01
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+..+.+||.+||+.+|++||++.+++.
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 12234556889999999999999999999985
No 242
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-37 Score=319.71 Aligned_cols=259 Identities=22% Similarity=0.359 Sum_probs=193.9
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..+|++.+.||+|+||.||+|... +++.||+|.... .....|+.++++++||||+++++++.+....++|||+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 457999999999999999999976 578899997542 2235699999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+ .++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 139 ~-~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 139 Y-SSDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred c-CCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 9 468988887543 35899999999999999999999999 999999999999999999999999998753221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcH----HHHHHHHHhcCch-----h
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL----VGYFLQAINENRL-----F 545 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~-----~ 545 (597)
.......||+.|+|||++.+..++.++||||||+++|||+++..|+........... ...+...+..... .
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 122345689999999999999999999999999999999986655433222111110 0111111110000 0
Q ss_pred ---------hhhhHHhhh---------hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 546 ---------EALDARVLK---------EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 546 ---------~~l~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..++..... ......+..+.+||.+||+.||.+|||+.||++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000000000 0001223456679999999999999999999863
No 243
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.5e-37 Score=312.97 Aligned_cols=256 Identities=28% Similarity=0.521 Sum_probs=202.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGR----IVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~----~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
++|+..+.||+|+||.||+|.+. +++ .+|+|...... .....++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45778889999999999999864 443 57888876433 33345789999999999999999999998754 4679
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
++||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 999999999999997643 24889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 471 VDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 471 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
..... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~-- 231 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------IPDLLEKGERLP-- 231 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHCCCCCC--
Confidence 32221 1222335678999999998899999999999999999997 899986543221 112222211110
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.....+..+.+++.+||..+|++||++++++++|+.+..
T Consensus 232 -------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 232 -------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111234568899999999999999999999999998753
No 244
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-36 Score=324.61 Aligned_cols=262 Identities=21% Similarity=0.333 Sum_probs=200.0
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
...+|.+.+.||+|+||.||++.+. .++.||||... ...+.+|+++|++++|+||+++++++...+..+||||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3557999999999999999999976 47899999643 2346789999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
++ .++|.+++.... ..+++.+++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 241 ~~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 241 KY-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 99 478999887542 25999999999999999999999999 9999999999999999999999999997654322
Q ss_pred c-eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC-CCcHHHHHHHHHhcCchh-----h
Q 038707 474 T-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE-DKSLVGYFLQAINENRLF-----E 546 (597)
Q Consensus 474 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~ 546 (597)
. .......||+.|+|||++.+..++.++|||||||+||||++|..|+....... .......+...+...... .
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 1 12234569999999999999999999999999999999999887664433221 111111122222211110 0
Q ss_pred h----hhHHhhh---------------hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 547 A----LDARVLK---------------EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 547 ~----l~~~~~~---------------~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
. +...... .........+.+||.+||+.||.+|||+.|+|+.
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0000000 0000123468899999999999999999999974
No 245
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-37 Score=307.54 Aligned_cols=240 Identities=25% Similarity=0.451 Sum_probs=191.6
Q ss_pred CcccccCceEEEEEEecC--------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 323 RILGQGGQGTVYKGMLTD--------GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~--------~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+.||+|+||.||+|.... ...+++|..........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998642 234888887655555667899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc--------EEEeecccc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR--------AKVSDFGTS 466 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~--------~kl~Dfgl~ 466 (597)
+++|+|.++++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +|++|||++
T Consensus 81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence 999999999986432 4899999999999999999999999 999999999999987765 699999988
Q ss_pred ccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCC-CCCCCCCCcCCCcHHHHHHHHHhcCch
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQ-KPIRAINTDEDKSLVGYFLQAINENRL 544 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (597)
..... .....++..|+|||++.+ ..++.++||||||+++|||++|. .|+....... ........
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-------~~~~~~~~-- 221 (258)
T cd05078 156 ITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-------KLQFYEDR-- 221 (258)
T ss_pred cccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-------HHHHHHcc--
Confidence 65432 122457888999999876 45899999999999999999985 5554322111 00111110
Q ss_pred hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 545 FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 545 ~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
...+.....++.+|+.+||+.+|++|||++++++.|+
T Consensus 222 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 ---------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0111222356889999999999999999999999874
No 246
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-36 Score=313.94 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=195.2
Q ss_pred cCCccccc--CceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 321 ANRILGQG--GQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 321 ~~~~lg~G--~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
+.++||+| +|++||++..+ +|+.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78999999975 6899999988653 2334566778999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.++++||+...........
T Consensus 82 ~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999999976432 24899999999999999999999999 999999999999999999999999865443211110
Q ss_pred ------eeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 476 ------LTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 476 ------~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ ..... .+.....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------~~~~~-~~~~~~~ 230 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM------LLEKL-NGTVPCL 230 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH------HHHHh-cCCcccc
Confidence 0112246778999999876 4689999999999999999999999975332110 00000 0000000
Q ss_pred hhH------------------------------------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 LDA------------------------------------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 l~~------------------------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
++. ...........+.+.+|+.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 0000111234567899999999999999999999986
No 247
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.5e-37 Score=305.83 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=203.0
Q ss_pred CCccCCcccccCceEEEEEEecC--CcEEEEEEcccc----------ChhhHHHHHHHHHHHhh-cCCCccceeeeEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLTD--GRIVAVKKSKLV----------DETNVEQFINEVVILSQ-INHRNIVKLLGCCLE 384 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~vaiK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 384 (597)
+|++.+.||+|+||.||+|.+.. ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999764 688999976532 23345668889998875 799999999999999
Q ss_pred CCcceEEEeccCCCChhhHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEee
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQ-IEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSD 462 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~D 462 (597)
.+..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ .+ ++|+||+|+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999998652 223458999999999999999999996 56 99999999999999999999999
Q ss_pred ccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 463 FGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 463 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
||++....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+...
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-------~~~~~~~~ 228 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-------LATKIVEA 228 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-------HHHHHhhc
Confidence 99997654332 2344558889999999998889999999999999999999999986432111 11111111
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.... ......+..+.+++.+||+.||++||++.|+.++|+
T Consensus 229 ~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VYEP--------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCc--------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1110 001123467889999999999999999999999886
No 248
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.7e-37 Score=321.09 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=198.9
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC-----
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLET----- 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 385 (597)
...++|++.+.||+|+||.||++... .++.||||++... .......+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 34578999999999999999999975 5889999987642 344556788999999999999999999987643
Q ss_pred -CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 386 -EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 386 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
...++||||+++ +|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCC
Confidence 346899999964 77777753 2788999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh----
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN---- 540 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---- 540 (597)
+++..... .......+|..|+|||++.+..++.++||||||+++|+|++|+.||...+..+. .........
T Consensus 172 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 246 (364)
T cd07875 172 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ---WNKVIEQLGTPCP 246 (364)
T ss_pred CccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCH
Confidence 99764322 222345689999999999999999999999999999999999999976442211 000000000
Q ss_pred ---------------cCch-----hhhhhHHhh----hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 541 ---------------ENRL-----FEALDARVL----KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 541 ---------------~~~~-----~~~l~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.... .+.+.+... ..........+.+||.+||+.||.+|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 000000000 00011123468899999999999999999999874
No 249
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-36 Score=303.93 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=196.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-----DETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVP 388 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 388 (597)
.+|+..+.||+|+||.||+|... +++.|++|++... .......+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47899999999999999999975 5889999987532 123456788999999999999999999998763 567
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++++||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997542 3889999999999999999999998 99999999999999999999999999876
Q ss_pred ccCCCc--eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 469 VMVDQT--HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 469 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
...... .......++..|+|||.+.+..++.++||||||+++|||++|+.||......+ ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~------~~~~~~~~~~--- 226 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA------AIFKIATQPT--- 226 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH------HHHHHhcCCC---
Confidence 532111 11223457889999999998889999999999999999999999997432111 1111111110
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+....+.+.+++ +||..+|++||+++||++
T Consensus 227 ------~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 ------NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ------CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0111223345567777 688899999999999976
No 250
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.7e-37 Score=303.04 Aligned_cols=247 Identities=27% Similarity=0.454 Sum_probs=202.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-----hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-----ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+|+..+.||+|++|.||+|... +++.|++|.+.... ......+.+|+.++++++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999986 78999999865433 33567899999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
+||+++++|.+++.... ++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997642 4889999999999999999999999 99999999999999999999999999876543
Q ss_pred CCceeeecccccccccCccccccCC-CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQ-FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...... ............
T Consensus 155 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~------ 220 (258)
T cd06632 155 FS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV------AAVFKIGRSKEL------ 220 (258)
T ss_pred cc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH------HHHHHHHhcccC------
Confidence 32 233455888999999987766 899999999999999999999998653311 111111110111
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+......+.+++.+||+.+|++||++.++++
T Consensus 221 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ---PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1112234566889999999999999999999985
No 251
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.9e-36 Score=303.43 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=192.1
Q ss_pred CcccccCceEEEEEEecC---CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLTD---GRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~---~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||.||+|...+ ...+++|.+... .......+.+|+.+++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997543 457888876543 3344567899999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce-
Q 038707 399 TLYQYIHNQIEE--FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH- 475 (597)
Q Consensus 399 sL~~~l~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~- 475 (597)
+|.+++...... ...++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999875322 23567888999999999999999999 999999999999999999999999998654322211
Q ss_pred eeecccccccccCcccccc-------CCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQS-------SQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
......++..|+|||++.. ..++.++||||||+++|||++ |..||......+ .......... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~~~~~-~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ------VLKQVVREQD-IKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH------HHHHHhhccC-ccC
Confidence 1222345678999998643 456889999999999999999 788886432211 1111121111 111
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
..+. .....+..+.+++..|+ .||++|||+++|++.|.
T Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 12234456778889998 59999999999999874
No 252
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.7e-37 Score=308.85 Aligned_cols=255 Identities=28% Similarity=0.418 Sum_probs=204.9
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|+||+||++... +++.+|+|..... .....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56788899999999999999975 5889999986643 244567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++... .++++..+..++.+++.||.|||+ ++ ++|+||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 9999999998763 248999999999999999999997 46 9999999999999999999999999986543221
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCC-----cHHHHHHHHHhcCchhhhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDK-----SLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l 548 (597)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||......++. .....+...+..
T Consensus 159 ---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 228 (284)
T cd06620 159 ---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------- 228 (284)
T ss_pred ---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-------
Confidence 12346889999999998889999999999999999999999999865432211 111111111110
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
..........+..+.+|+.+||+.||++|||+.|++++.
T Consensus 229 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 229 --PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000001122456789999999999999999999999864
No 253
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.3e-36 Score=301.88 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=207.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||.|++|+||+|... ++..+++|...... ......+.+|+++++.++|+||+++++.+...+..++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46899999999999999999965 68899999876432 33567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.++++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999987543345899999999999999999999999 99999999999999999999999999877654332
Q ss_pred e---eeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 475 H---LTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 475 ~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
. ......++..|+|||++... .++.++|+||||+++++|++|+.||......+ .+........ +
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~~------~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQNDP------P 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcCCC------C
Confidence 2 22334588899999998776 78999999999999999999999997543321 1111111100 0
Q ss_pred Hhhhhh-hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEA-KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...... ....++.+.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 010000 1244567889999999999999999999986
No 254
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.8e-37 Score=318.45 Aligned_cols=259 Identities=22% Similarity=0.327 Sum_probs=196.7
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC-----
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLET----- 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 385 (597)
...++|++.+.||+|+||+||++... +++.||||++... .......+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34678999999999999999999975 6889999987642 223456688999999999999999999987643
Q ss_pred -CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 386 -EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 386 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
...++++|++ +++|.+++... .+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence 3468999988 77998887542 3899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
+++..... .....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......+ ........... .
T Consensus 164 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~-~ 235 (343)
T cd07878 164 LARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID---QLKRIMEVVGT-P 235 (343)
T ss_pred cceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHhCC-C
Confidence 99765322 233458999999999876 578999999999999999999999996533211 11101000000 0
Q ss_pred hhhhhh---H----Hh-----------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 544 LFEALD---A----RV-----------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 544 ~~~~l~---~----~~-----------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+.+. . .. .........+.+.+|+.+||+.||.+|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0 00 000001123457899999999999999999999864
No 255
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.8e-37 Score=319.01 Aligned_cols=240 Identities=27% Similarity=0.313 Sum_probs=188.2
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc---CCCccceeeeEEEeCCcceEEEeccCC
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQI---NHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
||+|+||+||+|... +++.||||.+... .......+..|..++... +||||+++++.+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999976 5899999987532 222344566677777665 699999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~ 153 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTT 153 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCc
Confidence 9999998754 34899999999999999999999999 9999999999999999999999999987543222 223
Q ss_pred ecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
....||+.|+|||++.+. .++.++||||||+++|+|++|+.||......+ ....+..+... + .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-------~~~~i~~~~~~------~---~ 217 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-------MYRNIAFGKVR------F---P 217 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-------HHHHHHcCCCC------C---C
Confidence 345689999999998754 58999999999999999999999997533211 11112111110 0 0
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPT----MKEVTN 587 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt----~~evl~ 587 (597)
....+..+.+|+.+||+.||.+||+ +.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1123456789999999999999984 555554
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.2e-37 Score=308.81 Aligned_cols=261 Identities=23% Similarity=0.346 Sum_probs=203.4
Q ss_pred HHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe--
Q 038707 309 SKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLE-- 384 (597)
Q Consensus 309 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-- 384 (597)
.+.+..+.++|++.+.||+|+||.||++... +++.+|+|...... ....++.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 4556667889999999999999999999975 58899999876432 2346688899999999 69999999998853
Q ss_pred ---CCcceEEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 385 ---TEVPLLVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 385 ---~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
.+..++||||+++++|.++++... ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEE
Confidence 346899999999999999887532 2345889999999999999999999998 999999999999999999999
Q ss_pred eeccccccccCCCceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHH
Q 038707 461 SDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 461 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~ 535 (597)
+|||++........ ......|++.|+|||++.. ..++.++||||||+++|||++|+.||....... ..
T Consensus 166 ~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~------~~ 238 (286)
T cd06638 166 VDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR------AL 238 (286)
T ss_pred ccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH------HH
Confidence 99999876543221 2233458999999998753 457889999999999999999999986543211 00
Q ss_pred HHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 536 LQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.. ..........+ +......+.+|+.+||+.+|++|||+.||++.
T Consensus 239 ~~-~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 FK-IPRNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hh-ccccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 00110000000 11224468899999999999999999999875
No 257
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2e-36 Score=303.81 Aligned_cols=256 Identities=25% Similarity=0.486 Sum_probs=201.2
Q ss_pred CccCCcccccCceEEEEEEec----CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC------
Q 038707 319 YNANRILGQGGQGTVYKGMLT----DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE------ 386 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 386 (597)
|.+.+.||+|+||.||+|.+. +++.||||..... .....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999864 3688999987642 3455678999999999999999999999886542
Q ss_pred cceEEEeccCCCChhhHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeec
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQI---EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 463 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 463 (597)
..++++||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2478999999999999875421 2235889999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 464 GTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 464 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
|+++........ ......+++.|++||.+....++.++||||||+++|+|++ |+.||......+ ....+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-------~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-------IYNYLIK 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-------HHHHHHc
Confidence 999865433221 1122335678999999988889999999999999999999 888886543211 1111111
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
.... ......+..+.+++.+||+.+|++||++.++++.|++++
T Consensus 231 ~~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 231 GNRL---------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred CCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 1110 011233457899999999999999999999999999874
No 258
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=9.6e-37 Score=307.71 Aligned_cols=259 Identities=25% Similarity=0.395 Sum_probs=203.5
Q ss_pred CHHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe-
Q 038707 308 TSKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLE- 384 (597)
Q Consensus 308 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 384 (597)
+..++....+.|++.+.||+|+||.||+|.+. +++.+|+|..... .....++..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 34455556788999999999999999999975 5889999987643 33456788999999999 69999999999863
Q ss_pred -----CCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEE
Q 038707 385 -----TEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAK 459 (597)
Q Consensus 385 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~k 459 (597)
.+..+++|||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+|+||+|+||++++++.+|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 456799999999999999997643 335889999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCCCceeeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHH
Q 038707 460 VSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY 534 (597)
Q Consensus 460 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~ 534 (597)
|+|||++........ ......+++.|+|||.+. ...++.++||||||+++|||++|+.||......+.
T Consensus 162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------ 234 (282)
T cd06636 162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------ 234 (282)
T ss_pred EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------
Confidence 999999875432211 122345888999999875 34678899999999999999999999965332110
Q ss_pred HHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 535 FLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
... ..... .........+..+.+||.+||+.||.+|||+.|+++
T Consensus 235 ~~~-~~~~~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 LFL-IPRNP--------PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhh-HhhCC--------CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000 00000 001111234567899999999999999999999975
No 259
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.4e-36 Score=301.93 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=204.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|+||.+|++... +++.+|+|.+... ......++.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4888999999999999999975 6889999987642 344566899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 99999999997642 234789999999999999999999999 99999999999999999999999999976543221
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
......+++.|+|||++.+...+.++|+||||+++++|++|+.||...... ....... .+.. .
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~-~~~~---------~ 219 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKII-RGSY---------P 219 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHh-cCCC---------C
Confidence 122334788999999999888999999999999999999999998643211 1111111 1111 0
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+...+..+.++|.+||+.+|++||++.+|++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1123345678999999999999999999999873
No 260
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2e-36 Score=302.45 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=198.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-----DETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVP 388 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 388 (597)
.+|++.+.||+|+||.||+|... +++.||||.+... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47889999999999999999975 5899999986532 123456889999999999999999999998764 467
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
+++|||+++++|.+++.... .+++..+.+++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999997542 3789999999999999999999999 99999999999999999999999999876
Q ss_pred ccCCCc--eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 469 VMVDQT--HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 469 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
...... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~---- 225 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA------AIFKIATQP---- 225 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH------HHHHHhcCC----
Confidence 532111 11223458889999999988889999999999999999999999986431111 111111110
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+......+.+++.+|+ .+|++||++++|++
T Consensus 226 -----~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 226 -----TNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred -----CCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 011123344566889999999 59999999999985
No 261
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-36 Score=302.38 Aligned_cols=251 Identities=29% Similarity=0.445 Sum_probs=204.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEe--CCcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLE--TEVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 392 (597)
+|++.+.||.|+||.||++... +++.+|+|.+.. ......+++.+|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999965 688999998763 344556788999999999999999999998764 34678999
Q ss_pred eccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 393 EFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLH-----SAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
||+++++|.+++.... ...++++..++.++.||+.||.||| +.+ ++|+||+|+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999997642 2346899999999999999999999 666 999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
........ ......+++.|+|||.+.+..++.++|+||||+++++|++|+.||...... .....+..+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-- 227 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-------QLASKIKEGKF-- 227 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-------HHHHHHhcCCC--
Confidence 87643322 123346899999999999888999999999999999999999999754311 12222222221
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+...+..+.+++.+||+.+|++||++++|++.
T Consensus 228 -------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 12233455678999999999999999999999863
No 262
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.4e-36 Score=302.24 Aligned_cols=252 Identities=25% Similarity=0.457 Sum_probs=202.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC------hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD------ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (597)
+|+..+.||+|++|.||++... +++.+|+|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999964 68999999876432 2245788999999999999999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSRSV 469 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~~~ 469 (597)
||||+++++|.+++.+.. ++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++ .+||+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997542 4899999999999999999999999 99999999999998775 5999999998766
Q ss_pred cCCCce---eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 470 MVDQTH---LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 470 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
...... ......++..|+|||.+.+..++.++||||||+++++|++|..||........ ...... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~-~~~~---- 226 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFK-IASA---- 226 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHH-Hhcc----
Confidence 433211 12234578899999999888899999999999999999999999964332211 111101 0000
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......+...++.+.+++.+||+.+|++||++.++++
T Consensus 227 ----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 ----TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ----CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0111223445667889999999999999999999985
No 263
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1e-36 Score=307.90 Aligned_cols=262 Identities=23% Similarity=0.315 Sum_probs=203.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||+|.+. +++.|++|++.... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999975 68999999876543 34457899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+ +++|.+++.... .++++.+++.++.||++||.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999997643 45999999999999999999999999 99999999999999999999999999987654332
Q ss_pred eeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc---hh---hh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR---LF---EA 547 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~ 547 (597)
.......++..|+|||.+.+. .++.++||||||++++||++|++||......+ ............. +. +.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE---QLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH---HHHHHHHHcCCCChHHHhhccCc
Confidence 223344588899999998654 46899999999999999999988876433211 1111111100000 00 00
Q ss_pred -----h-----hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 -----L-----DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 -----l-----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+ ..........+....+.+|+.+||+.+|++||+++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000011112335788999999999999999999999863
No 264
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.2e-37 Score=330.14 Aligned_cols=267 Identities=20% Similarity=0.271 Sum_probs=194.9
Q ss_pred HHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCC------CccceeeeE
Q 038707 309 SKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINH------RNIVKLLGC 381 (597)
Q Consensus 309 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~ 381 (597)
.+++....++|++.++||+|+||+||+|.+. .++.||||+++... ....++..|+.+++.++| .++++++++
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 3445556788999999999999999999975 58899999986432 233455667777777654 458889888
Q ss_pred EEeC-CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCC---
Q 038707 382 CLET-EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKY--- 456 (597)
Q Consensus 382 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~--- 456 (597)
+... ...++|||++ +++|.+++.+. ..+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccc
Confidence 8765 4678999988 77899988754 348999999999999999999998 48 99999999999998765
Q ss_pred -------------cEEEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCC
Q 038707 457 -------------RAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAI 523 (597)
Q Consensus 457 -------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~ 523 (597)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||+||||++|+.||...
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999875422 2233456899999999999999999999999999999999999999764
Q ss_pred CCcCCCcHHHHH--------HH---------HHh-cCchhhhhhHHhhhh-------hhHHHHHHHHHHHHHhcccCCCC
Q 038707 524 NTDEDKSLVGYF--------LQ---------AIN-ENRLFEALDARVLKE-------AKKEEIMTVATLAKRCLNLNGKM 578 (597)
Q Consensus 524 ~~~~~~~~~~~~--------~~---------~~~-~~~~~~~l~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~ 578 (597)
...+........ .. ... .+.+....++..... ........+.+||.+||++||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 432211111000 00 000 000000000000000 00112356789999999999999
Q ss_pred CCCHHHHHH
Q 038707 579 RPTMKEVTN 587 (597)
Q Consensus 579 RPt~~evl~ 587 (597)
|||++|+++
T Consensus 429 R~ta~e~L~ 437 (467)
T PTZ00284 429 RLNARQMTT 437 (467)
T ss_pred CCCHHHHhc
Confidence 999999986
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=9.6e-37 Score=309.44 Aligned_cols=248 Identities=27% Similarity=0.408 Sum_probs=201.3
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 444467999999999999975 6889999998766666677899999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++... .+++..+..++.||+.||.|||+++ |+||||||+||++++++.+||+|||++........ ..
T Consensus 104 ~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~ 175 (292)
T cd06658 104 GALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KR 175 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cC
Confidence 9999988543 3889999999999999999999999 99999999999999999999999999876532221 22
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+ .+ ..+.. .+.+.+. ..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~-~~~~~-----~~~~~~~--~~ 241 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ------AM-RRIRD-----NLPPRVK--DS 241 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HH-HHHHh-----cCCCccc--cc
Confidence 33458899999999988889999999999999999999999986432211 11 11111 0011110 01
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+..+.+++.+||+.+|.+|||++++++.
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2234568899999999999999999999874
No 266
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-36 Score=311.59 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=202.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh---hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE---TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|++|.||++... +++.+|+|....... .....+.+|+++++.++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999976 489999998764322 35567899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+.+++|.+++.... ...+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987542 345899999999999999999999999 999999999999999999999999998754321
Q ss_pred Cce----------------------------eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCC
Q 038707 473 QTH----------------------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 524 (597)
Q Consensus 473 ~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~ 524 (597)
... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 110 1112357889999999998889999999999999999999999997543
Q ss_pred CcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 038707 525 TDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT----MKEVTN 587 (597)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt----~~evl~ 587 (597)
..+ .+...... ..........+..+.+++.+||+.+|++||+ +.+++.
T Consensus 237 ~~~------~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RDE------TFSNILKK---------EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHH------HHHHHhcC---------CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 221 11111111 1111111225677999999999999999999 666655
No 267
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.9e-36 Score=301.96 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=191.2
Q ss_pred CcccccCceEEEEEEecCC---cEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 323 RILGQGGQGTVYKGMLTDG---RIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~---~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.||+|+||+||+|...++ ..+++|..... .....+.+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999985432 35667766543 2345678999999999999999999999999999999999999999
Q ss_pred ChhhHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC-cee
Q 038707 399 TLYQYIHNQIE-EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ-THL 476 (597)
Q Consensus 399 sL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~-~~~ 476 (597)
+|.+++++... ...+++..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999986432 234677788899999999999999998 9999999999999999999999999985432211 112
Q ss_pred eecccccccccCcccccc-------CCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQS-------SQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||...... ......+... .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~-~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR------EVLNHVIKDQ-QVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhhc-ccccC
Confidence 233457889999998743 245789999999999999997 56677543221 1122222211 11222
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
++... ....+.+.+++..|| .+|++||++++|++.|.
T Consensus 231 ~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22221 123456788999999 67999999999999885
No 268
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-36 Score=306.72 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=200.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|++|.||+|... +++.||+|+..... ....+.+.+|+.++++++|+||+++++++.+....++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999986 58999999875432 2234567899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|..++... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99998888876543 24899999999999999999999999 9999999999999999999999999998764332
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc-----------
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE----------- 541 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 541 (597)
. ......++..|+|||.+.+ ..++.++||||||+++++|++|+.||......+. ..........
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 155 D-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ---LYLIRKTLGDLIPRHQQIFST 230 (286)
T ss_pred c-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChHHhhhccc
Confidence 1 1223447788999999865 5688999999999999999999999975443221 0000000000
Q ss_pred Cchhh---hhhHHhh---hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 NRLFE---ALDARVL---KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 ~~~~~---~l~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.... ..++... .......+..+.+|+.+||+.+|++||++.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000 0000000 0001223567889999999999999999999875
No 269
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=300.53 Aligned_cols=269 Identities=26% Similarity=0.393 Sum_probs=209.2
Q ss_pred HHHhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhc--CCCccceeeeEEEeCC----
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQI--NHRNIVKLLGCCLETE---- 386 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~---- 386 (597)
..+.++..+.+.||+|.||+||+|.+. |+.||||++...++ ..+.+|.+|.+.. +|+||+.+++.-..++
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 445577888999999999999999995 89999999875433 4577888888874 8999999998876543
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCCCeEeccCCCCCeEeCCCCcEEEe
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-----AASIPIYHRDIKSANILLDDKYRAKVS 461 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-----~~~~~i~H~Dik~~NIll~~~~~~kl~ 461 (597)
.++||.+|.+.|+|.|||.+. .++.+..++++..+|.||++||. ++++.|.|||||+.|||+..++.+-|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 679999999999999999874 49999999999999999999996 577889999999999999999999999
Q ss_pred eccccccccCCCce---eeecccccccccCccccccCC----C--CcccceeehHHHHHHHHhC----------CCCCCC
Q 038707 462 DFGTSRSVMVDQTH---LTTKVQGTFGYVDPEYFQSSQ----F--TEKSDVYSFGVVLVEILTG----------QKPIRA 522 (597)
Q Consensus 462 Dfgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~----~--~~~sDv~SlG~il~ell~g----------~~p~~~ 522 (597)
|+|||-....+... ......||.+|||||++.+.- + -..+||||||.++||+..+ +.||..
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 99999776544322 234567999999999986532 1 2469999999999999752 357765
Q ss_pred CCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 523 INTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.-+.+... +.....+-..++...+..+ ....+....+.+|++.||..||.-|.|+-.+-+.|.++-+
T Consensus 439 ~Vp~DPs~--eeMrkVVCv~~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 439 VVPSDPSF--EEMRKVVCVQKLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCCH--HHHhcceeecccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 54433211 1111222222222222222 2235667789999999999999999999999999988763
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.8e-36 Score=299.46 Aligned_cols=249 Identities=27% Similarity=0.437 Sum_probs=202.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|+..+.||+|++|.||++... +++.+|+|.+... .......+.+|+.++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5888999999999999999975 6889999986543 344567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++.... ...+++..+..++.|++++|.|||+++ ++|+||+|+||+++++ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999998642 335899999999999999999999999 9999999999999865 468999999997664322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
......++..|+|||.+....++.++||||||+++++|++|+.||...+... .... .......
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~-~~~~~~~-------- 219 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA------LVLK-IMSGTFA-------- 219 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH------HHHH-HHhcCCC--------
Confidence 1223457889999999998889999999999999999999999986533211 1111 1111111
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+..+.+++.+||+.+|++|||++|+++.
T Consensus 220 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 -PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1122345568899999999999999999999863
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-36 Score=306.40 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=205.9
Q ss_pred ccCHHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEE
Q 038707 306 LFTSKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCL 383 (597)
Q Consensus 306 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 383 (597)
++...++..+.++|++.+.||+|+||.||++... +++.+|+|...... .....+.+|+.++.++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3455666677899999999999999999999975 68899999876432 2346678899999999 7999999999987
Q ss_pred eCC-----cceEEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 384 ETE-----VPLLVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 384 ~~~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
..+ ..++||||+++++|.++++... ....+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 543 5799999999999999987532 2345899999999999999999999998 999999999999999999
Q ss_pred EEEeeccccccccCCCceeeecccccccccCccccccC-----CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH
Q 038707 458 AKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSS-----QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 532 (597)
Q Consensus 458 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~ 532 (597)
+||+|||++........ ......++..|+|||.+... .++.++||||||+++|||++|+.||......+
T Consensus 167 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~----- 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK----- 240 (291)
T ss_pred EEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-----
Confidence 99999999876543221 12234578899999997543 36899999999999999999999997543211
Q ss_pred HHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 533 GYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.... +..+...... ........+.+||.+||+.+|++||++.|+++
T Consensus 241 -~~~~-~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 -TLFK-IPRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -HHHH-HhcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111 1111111110 11233456899999999999999999999986
No 272
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3e-36 Score=300.72 Aligned_cols=251 Identities=25% Similarity=0.449 Sum_probs=202.9
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|+..+.||+|++|.||+|... +++.+++|.++.... ...+.+.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888899999999999999975 688999998775444 3678899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++... ..+++..+..++.|+++||.|||+.+ |+|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999999764 23789999999999999999999999 99999999999999999999999999877654332
Q ss_pred eee---ecccccccccCccccccCC---CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 475 HLT---TKVQGTFGYVDPEYFQSSQ---FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 475 ~~~---~~~~gt~~y~aPE~~~~~~---~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
... ....++..|+|||++.... ++.++||||||+++++|++|+.||....... .... .+..+....
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~-~~~~~~~~~-- 226 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMF-HVGAGHKPP-- 226 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHH-HHhcCCCCC--
Confidence 221 1345788999999988766 8999999999999999999999996432111 1111 111110000
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. .......+.+.+++.+||+.+|++||++.+++.
T Consensus 227 ---~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 227 ---I--PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---C--CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 001123566789999999999999999999875
No 273
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8e-37 Score=341.07 Aligned_cols=256 Identities=24% Similarity=0.393 Sum_probs=200.5
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccc
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVP 388 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 388 (597)
...++|.+.+.||+|+||+||++.+. .+..+|+|.+.. ........+..|+.++++++||||+++++++.+. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34568999999999999999999976 577899998764 3444567899999999999999999999998654 468
Q ss_pred eEEEeccCCCChhhHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEeccCCCCCeEeCC---------
Q 038707 389 LLVYEFIPNGTLYQYIHNQIE-EFPITWELLLRIAVEVSGALFYLHSAAS----IPIYHRDIKSANILLDD--------- 454 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~----~~i~H~Dik~~NIll~~--------- 454 (597)
+|||||+++++|.++|..... ...+++..++.|+.||+.||.|||+.+. .+|+||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 999999999999999976322 2459999999999999999999998542 23999999999999964
Q ss_pred --------CCcEEEeeccccccccCCCceeeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCC
Q 038707 455 --------KYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAIN 524 (597)
Q Consensus 455 --------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~ 524 (597)
...+||+|||++...... .......||+.|+|||++.. ..++.++||||||||||||++|+.||....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 234899999999765322 12234568999999999854 458999999999999999999999996432
Q ss_pred CcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 525 TDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.. . .+...+...... .....+..+.+||..||+.+|.+||++.|++.
T Consensus 248 ~~-----~-qli~~lk~~p~l----------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NF-----S-QLISELKRGPDL----------PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cH-----H-HHHHHHhcCCCC----------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11 1 111112111110 01123456889999999999999999999984
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.8e-36 Score=302.61 Aligned_cols=254 Identities=25% Similarity=0.424 Sum_probs=200.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC----------hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD----------ETNVEQFINEVVILSQINHRNIVKLLGCCLETE 386 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 386 (597)
+|.+.+.||+|++|.||+|... +++.+|+|..+... ....+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5778899999999999999865 68999999765311 112356889999999999999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..++||||+++++|.+++++. .++++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999999865 35899999999999999999999998 999999999999999999999999998
Q ss_pred ccccCCCce-eeecccccccccCccccccCC--CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 467 RSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQ--FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 467 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
......... ......++..|+|||.+.... ++.++|+||||+++++|++|..||...... .. ..... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~-~~~~~-~~~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-----AA-MFKLG-NKR 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-----HH-HHHhh-ccc
Confidence 765422211 123345888999999987654 889999999999999999999998532211 11 11110 011
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+ ........+..+.+++.+||+.+|++||++++|++.
T Consensus 229 ~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPI----PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcC----CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 01111 111122345678999999999999999999999863
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.6e-37 Score=308.22 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=200.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|++|.||++.++ +++.+|+|+..... ....+.+.+|+++++.++||||+++++++.+.+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999986 58999999865422 2235678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|.++.... ..+++.+++.++.||++||+|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999888876543 23899999999999999999999998 9999999999999999999999999987654332
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--chhhhhh-
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN--RLFEALD- 549 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~- 549 (597)
.......++..|+|||++.+ ..++.++||||||++++||++|++||......+ ...........- ...+..+
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID---QLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH---HHHHHHHHhCCCchhhHHHhcc
Confidence 22233457889999999865 457889999999999999999999986433211 000000000000 0000000
Q ss_pred ---------H-----HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 550 ---------A-----RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 550 ---------~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+ ..........+..+.+|+.+||+.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 0000111234567999999999999999999999875
No 276
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-36 Score=309.25 Aligned_cols=260 Identities=21% Similarity=0.326 Sum_probs=188.4
Q ss_pred CCcccccCceEEEEEEec---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEe--CCcceEEEeccC
Q 038707 322 NRILGQGGQGTVYKGMLT---DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLE--TEVPLLVYEFIP 396 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 396 (597)
.++||+|+||+||+|... ++..+|+|.+... .....+.+|+.++++++||||+++++++.. ....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999965 3578999987643 223467899999999999999999999864 456789999986
Q ss_pred CCChhhHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe----CCCCcEEEeecccc
Q 038707 397 NGTLYQYIHNQI------EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL----DDKYRAKVSDFGTS 466 (597)
Q Consensus 397 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll----~~~~~~kl~Dfgl~ 466 (597)
++|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 47888775321 2235889999999999999999999999 9999999999999 56678999999999
Q ss_pred ccccCCCce--eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcH---HHHHHHHHh
Q 038707 467 RSVMVDQTH--LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL---VGYFLQAIN 540 (597)
Q Consensus 467 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~---~~~~~~~~~ 540 (597)
+........ ......+|+.|+|||++.+ ..++.++||||||+++|||++|++||.....+..... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 865433221 2233468999999999876 4589999999999999999999999975443211100 000000000
Q ss_pred c--------------CchhhhhhHHh-------------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 E--------------NRLFEALDARV-------------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~--------------~~~~~~l~~~~-------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. ......+.... ...........+.+|+.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000000000 00000112345788999999999999999999986
No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.6e-36 Score=301.48 Aligned_cols=252 Identities=28% Similarity=0.417 Sum_probs=204.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|+..+.||+|++|.||++.+. +++.+++|.+.... .....++.+|++++++++||||+++++.+......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778889999999999999986 58999999876543 34567789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++.... .++++..+..++.|+++||+|||+ .+ ++|+||||+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 99999999998653 458999999999999999999999 88 9999999999999999999999999987653222
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
.. ...++..|+|||.+.+..++.++||||||+++++|++|+.||....... ........... ....
T Consensus 156 ~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~--------- 221 (265)
T cd06605 156 AK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIV-NEPP--------- 221 (265)
T ss_pred hh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHh-cCCC---------
Confidence 11 1557889999999998899999999999999999999999997543211 11111111111 1100
Q ss_pred hhhhH-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 554 KEAKK-EEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 554 ~~~~~-~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..... ..+..+.++|.+||..+|++|||+.++++
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 01111 15567899999999999999999999985
No 278
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.5e-36 Score=307.29 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=201.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|+||.||++... .++.|++|.+.... ......+.+|+.+++.++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999976 57899999876432 234567889999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997642 4899999999999999999999998 999999999999999999999999988642111
Q ss_pred Cc--------------eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHH
Q 038707 473 QT--------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQA 538 (597)
Q Consensus 473 ~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 538 (597)
.. .......++..|+|||.+....++.++|+||||+++|||++|+.||.+....+ ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-------~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------LFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHH
Confidence 00 01112347889999999988889999999999999999999999996433211 1111
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
...+... .+ ......+..+.+|+.+||+.+|++||++.++++.|+
T Consensus 228 ~~~~~~~---~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 228 VISDDIE---WP----EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhcccC---CC----CccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 1111100 00 001134556889999999999999999766666554
No 279
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5e-36 Score=302.63 Aligned_cols=262 Identities=22% Similarity=0.366 Sum_probs=202.8
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
+|++.+.||+|++|.||+|... +++.||||.+..... .....+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999986 689999998875432 33567789999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++ +|.+++........+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 75 89998876554456999999999999999999999999 99999999999999999999999999975533221
Q ss_pred eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHH-----------hc-C
Q 038707 476 LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI-----------NE-N 542 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~-~ 542 (597)
......++..|++||.+.+ ..++.++||||||+++|+|++|+.||......+. ........ .. .
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ---LLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCChhhHHHHhcCc
Confidence 1223346889999998865 4578999999999999999999999976543221 11110000 00 0
Q ss_pred chhh---hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 543 RLFE---ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 543 ~~~~---~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.. ..............+..+.+++.+||+.+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 00000111112234567889999999999999999999985
No 280
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-36 Score=306.72 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=197.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||+|... +|+.+|+|.+.... ......+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999976 68999999876432 22345678899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++ ++|.+++.... ..+++..++.++.||++||.|||+.+ |+|+||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 58888876532 34899999999999999999999999 99999999999999999999999999876533221
Q ss_pred eeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc------hhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR------LFEA 547 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 547 (597)
......+++.|+|||.+.+. .++.++||||||+++|+|++|+.|+......+ .............. +.+.
T Consensus 155 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 155 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred -CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhc
Confidence 12234578899999998664 47899999999999999999998865332211 11111100000000 0000
Q ss_pred hhHH--------h-hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 LDAR--------V-LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 l~~~--------~-~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.. . ........++++.+|+.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 0 00111224567889999999999999999999986
No 281
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.1e-36 Score=305.91 Aligned_cols=250 Identities=26% Similarity=0.416 Sum_probs=205.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
++|.+.+.||+|+||.||++... +++.+++|..........+.+.+|+.++++++||||+++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 67999999999999999999865 68899999987655556678999999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 999999999753 3789999999999999999999999 99999999999999999999999998875543222
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......+++.|+|||.+....++.++||||||+++|+|++|+.||......+... .....+. ....
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~--------~~~~ 236 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT--------PELQ 236 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC--------CCCC
Confidence 2223458889999999988889999999999999999999999997543322100 0000000 0011
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+..+.+++.+||+.+|++||++.+++.+
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122345568899999999999999999999875
No 282
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.2e-36 Score=307.56 Aligned_cols=246 Identities=26% Similarity=0.400 Sum_probs=200.2
Q ss_pred cCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCC
Q 038707 321 ANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGT 399 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 399 (597)
....||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++++||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3447999999999999975 689999999876555566788999999999999999999999999999999999999999
Q ss_pred hhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeec
Q 038707 400 LYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK 479 (597)
Q Consensus 400 L~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 479 (597)
|.+++... .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... .....
T Consensus 105 L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~ 176 (297)
T cd06659 105 LTDIVSQT----RLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 176 (297)
T ss_pred HHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccc
Confidence 99987542 3899999999999999999999999 9999999999999999999999999987554322 12233
Q ss_pred ccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHH
Q 038707 480 VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKE 559 (597)
Q Consensus 480 ~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 559 (597)
..++..|+|||++.+..++.++||||||++++||++|+.||......+ ....+....... ......
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~-------~~~~~~ 242 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-------AMKRLRDSPPPK-------LKNAHK 242 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhccCCCC-------ccccCC
Confidence 558899999999998889999999999999999999999997432211 111111110000 001122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 560 EIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 560 ~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....+.+++.+||+.+|++||+++++++.
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 34568899999999999999999999883
No 283
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.9e-36 Score=302.39 Aligned_cols=254 Identities=26% Similarity=0.411 Sum_probs=201.7
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCC------
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETE------ 386 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 386 (597)
.+++|++.+.||+|++|.||+|... +++.+++|....... ..+++.+|+.+++++ +|+||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999985 578999998775433 446799999999999 6999999999997655
Q ss_pred cceEEEeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4799999999999999987632 2346899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
+....... .......++..|+|||.+.. ..++.++||||||++|++|++|+.||....... ...+ +.
T Consensus 160 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~-~~ 231 (275)
T cd06608 160 SAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR------ALFK-IP 231 (275)
T ss_pred ceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH------HHHH-hh
Confidence 87653222 22233458889999998753 346789999999999999999999996432111 1111 11
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...... .......++.+.+|+.+||..||++|||+.++++
T Consensus 232 ~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RNPPPT-------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccCCCC-------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111100 0112235567889999999999999999999986
No 284
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.4e-36 Score=307.19 Aligned_cols=262 Identities=25% Similarity=0.332 Sum_probs=203.0
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|++|.||+|.+. +++.|++|.++.. .....+.+.+|++++++++|+||+++++++.+.+..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999976 5889999987642 33445789999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|++++.+..++... ..+++.+++.++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99987776655432 34899999999999999999999999 9999999999999999999999999988765443
Q ss_pred ceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh------------
Q 038707 474 THLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN------------ 540 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 540 (597)
........++..|+|||++.+. .++.++||||||+++|+|++|+.||......+ ..........
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID---QLYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHhhhccc
Confidence 3233345678899999999887 88999999999999999999999997543211 0000000000
Q ss_pred cC-----chhhhhhHHh-hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 EN-----RLFEALDARV-LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~~-----~~~~~l~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.. ...+..++.. ........+.++.+||++||..+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 0000000000 00111223677999999999999999999999875
No 285
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.7e-36 Score=298.57 Aligned_cols=252 Identities=27% Similarity=0.415 Sum_probs=208.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|++|.||++... +++.+++|+...... .....+.+|+..+++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999987 589999998775443 4567899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++... .++++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999999864 358999999999999999999999 88 9999999999999999999999999987664332
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
.. .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||....... ..... ..+.....
T Consensus 155 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~-~~~~~~~~--------- 220 (264)
T cd06623 155 DQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELM-QAICDGPP--------- 220 (264)
T ss_pred Cc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHH-HHHhcCCC---------
Confidence 22 223457889999999998899999999999999999999999997654311 11111 11111111
Q ss_pred hhhhHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 KEAKKE-EIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...... .+..+.+++.+||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111222 55679999999999999999999999874
No 286
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.6e-37 Score=314.24 Aligned_cols=245 Identities=26% Similarity=0.439 Sum_probs=197.3
Q ss_pred ccCCcccccCceEEEEEEec-CCcEEEE---EEcc-ccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc--ceEEE
Q 038707 320 NANRILGQGGQGTVYKGMLT-DGRIVAV---KKSK-LVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEV--PLLVY 392 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~-~~~~vai---K~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 392 (597)
+...+||+|+|-+||+|.+. +|..||= |.-. ...+...++|..|+.+|+.|+||||++++.+..+... ..+|.
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34568999999999999986 4777763 3222 1345667999999999999999999999999987665 77899
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfgl~~~~~~ 471 (597)
|.+..|+|..|++++.+ ++.+.+..|++||++||.|||++. +||+|||||-+||+|+.+ |.|||+|+|||.....
T Consensus 123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999998754 889999999999999999999987 679999999999999764 7899999999987643
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.. .....|||.|||||+.. ..|++..||||||+.|+||+|+..||.. -.+....+ ..+-.|.-...+.
T Consensus 199 s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-----C~n~AQIY-KKV~SGiKP~sl~-- 266 (632)
T KOG0584|consen 199 SH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-----CTNPAQIY-KKVTSGIKPAALS-- 266 (632)
T ss_pred cc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-----hCCHHHHH-HHHHcCCCHHHhh--
Confidence 22 22367999999999987 7899999999999999999999999953 33333332 2222332222221
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.-..+++.+||.+||.. .++|||+.|+|.
T Consensus 267 ------kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 267 ------KVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ------ccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 11135688999999988 999999999986
No 287
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.4e-36 Score=303.13 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=198.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|+..+.||.|++|.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999976 68999999876432 22346788999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+. ++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 68999887643 345899999999999999999999999 99999999999999999999999999876532221
Q ss_pred eeeecccccccccCccccccCC-CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc--hhhhhh--
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQ-FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR--LFEALD-- 549 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~-- 549 (597)
......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||......+ ..... ........ ....+.
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRI-FRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHH-HHHhCCCChhhhhhhhHH
Confidence 122234678899999886644 6889999999999999999999997533211 11110 00000000 000000
Q ss_pred -----------HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 550 -----------ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 550 -----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.............++.++|.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000111123456789999999999999999999985
No 288
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-37 Score=310.90 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=202.2
Q ss_pred HhcCCccCCcccccCceEEEEEEecCCcEEEEEEccc--cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKL--VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 391 (597)
....|++.++||+||.+.||++...+.+.+|+|++.. .+.....-|.+|+..|.+|+ |.+||+|++|-..++.+|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3466999999999999999999988888899987653 56777889999999999995 99999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||= ..+|..+|++.... ++...+..+..|++.|+.++|.++ |||.||||.|+|+-.. .+||+|||.|..+..
T Consensus 439 mE~G-d~DL~kiL~k~~~~--~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVkG-~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSI--DPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVKG-RLKLIDFGIANAIQP 511 (677)
T ss_pred eecc-cccHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEee-eEEeeeechhcccCc
Confidence 9976 56999999876433 443478889999999999999999 9999999999999765 899999999998876
Q ss_pred CCce-eeecccccccccCccccccCC-----------CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHH
Q 038707 472 DQTH-LTTKVQGTFGYVDPEYFQSSQ-----------FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI 539 (597)
Q Consensus 472 ~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 539 (597)
+... ......||+.||+||.+.... .+.++||||||||||+|+.|+.||.... +...
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~a------ 580 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQIA------ 580 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHHH------
Confidence 6554 345567999999999975422 4679999999999999999999996321 1111
Q ss_pred hcCchhhhhhHHhhhhhhHHH-HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 540 NENRLFEALDARVLKEAKKEE-IMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 540 ~~~~~~~~l~~~~~~~~~~~~-~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
++..+.++....+++..- ..++.++++.||++||.+||+..++|+
T Consensus 581 ---Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 ---KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ---HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 122233332222211111 112889999999999999999999986
No 289
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.8e-36 Score=300.79 Aligned_cols=247 Identities=27% Similarity=0.451 Sum_probs=201.9
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
-|++.+.||+|+||.||+|... +++.+|||...... ......+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3677889999999999999875 68899999876432 344567899999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++++|.+++... .+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 85 ~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06641 85 GGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 156 (277)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch-h
Confidence 999999998643 4899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......++..|+|||.+.+...+.++|+||||+++++|++|..||....... ....+.... ...
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~---------~~~ 220 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-------VLFLIPKNN---------PPT 220 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-------HHHHHhcCC---------CCC
Confidence 1223457889999999988889999999999999999999999986432111 111111111 011
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 123345668899999999999999999999984
No 290
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=314.31 Aligned_cols=201 Identities=30% Similarity=0.429 Sum_probs=174.0
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-C-----CccceeeeEEEeCCcce
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQIN-H-----RNIVKLLGCCLETEVPL 389 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~ 389 (597)
-+|.+.++||+|.||.|-++.+. +++.||||+++. ...-..+...|+.+|..|+ | -|+|+++++|...++.+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN-~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN-KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeecc-ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 37999999999999999999975 699999999985 3445567788999999997 4 48999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC--CcEEEeeccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK--YRAKVSDFGTSR 467 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~--~~~kl~Dfgl~~ 467 (597)
||+|.+ ..+|.++|+.+... .++...+..++.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.|.
T Consensus 265 iVfELL-~~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 265 IVFELL-STNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeehhh-hhhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccc
Confidence 999999 56999999987443 4999999999999999999999999 9999999999999643 379999999997
Q ss_pred cccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE 527 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~ 527 (597)
.... ... .+..+..|.|||++.+.+|+.+.||||||||+.||++|.+.|.+.++.+
T Consensus 340 ~~~q---~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 340 FESQ---RVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred ccCC---cce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 5432 112 4556788999999999999999999999999999999988887765443
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.5e-36 Score=302.21 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=195.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHH-HhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVI-LSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|+||.||++.+. +|+.||||+++... .....++..|+.+ ++.++||||+++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888999999999999999976 68999999876532 2334456666665 566789999999999999999999999
Q ss_pred ccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 394 FIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|++ ++|.+++.... ....+++..++.++.||+.||+|||++ + ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 68988886532 234689999999999999999999987 7 99999999999999999999999999876532
Q ss_pred CCceeeecccccccccCcccccc----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQS----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.. ......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... .......... ....
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~-~~~~- 227 (283)
T cd06617 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-----FQQLKQVVEE-PSPQ- 227 (283)
T ss_pred cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-----HHHHHHHHhc-CCCC-
Confidence 21 1223457889999998864 45689999999999999999999998642211 1111111111 0000
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......++++.++|.+||..+|++||++.++++
T Consensus 228 -------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 -------LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001224567899999999999999999999986
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.3e-36 Score=304.41 Aligned_cols=262 Identities=24% Similarity=0.362 Sum_probs=197.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE-TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
++|++.+.||+|++|.||+|... +++.||||.+..... .....+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999976 689999998764322 2234577899999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++ +|.+++..... .+++..+..++.|+++||.|||+.+ |+|+||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 974 99999876432 5899999999999999999999999 99999999999999999999999999875432211
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC---ch------
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN---RL------ 544 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~------ 544 (597)
. .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... .........+... .+
T Consensus 159 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 159 T-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE--DQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred c-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHhcCCCChhhhhhhhhc
Confidence 1 122346788999999865 558899999999999999999999996543111 0000000000000 00
Q ss_pred -------hhhhhHHhhhhhhHHH--HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 -------FEALDARVLKEAKKEE--IMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 -------~~~l~~~~~~~~~~~~--~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+.......... ...+.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000000111 256789999999999999999999875
No 293
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-35 Score=299.78 Aligned_cols=260 Identities=28% Similarity=0.322 Sum_probs=203.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC--cceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETE--VPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 392 (597)
++|+..+.||.|++|.||++.+. +++.+|+|...... .....++.+|++++++++||||+++++++.+.. ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999985 58899999876433 345677999999999999999999999986543 679999
Q ss_pred eccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
||+++++|.+++.... ....+++..+..++.||++||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999999886532 2345899999999999999999999999 99999999999999999999999999865432
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ...... ...+.........+.
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~- 231 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIEL-LSYIVNMPNPELKDE- 231 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHH-HHHHhcCCchhhccC-
Confidence 221 23347888999999998899999999999999999999999997653311 111111 111111111111000
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. ......++.+.+++.+||+.+|++|||+.|+++
T Consensus 232 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 001224567899999999999999999999987
No 294
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.5e-36 Score=303.60 Aligned_cols=244 Identities=27% Similarity=0.375 Sum_probs=201.5
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|++.+.||+|++|.||++... +++.+|+|..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999976 5899999987532 2344577899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+|||+++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999999765 34899999999999999999999999 999999999999999999999999999776433
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||......+ ....+..+..
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-------- 215 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-------IYEKILEGKV-------- 215 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCc--------
Confidence 233458899999999988889999999999999999999999996533111 1111111111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..+...+..+.+++.+||+.+|.+|| +++|+++
T Consensus 216 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 --RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11122356688999999999999998 6666653
No 295
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.9e-36 Score=301.69 Aligned_cols=247 Identities=28% Similarity=0.411 Sum_probs=201.7
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
|...+.||+|++|.||++... +++.+++|+.........+.+.+|+.+++.++||||+++++++...+..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999965 6889999988766666667799999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++... .+++..+..++.|++.||+|||+++ |+||||+|+||++++++.+||+|||++........ ..
T Consensus 101 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~ 172 (285)
T cd06648 101 GALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RR 172 (285)
T ss_pred CCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc-cc
Confidence 9999998762 3899999999999999999999999 99999999999999999999999998875543221 22
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....|++.|+|||.+.+..++.++||||||+++++|++|+.||......+ . ...+..... +.. ...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~------~-~~~~~~~~~-----~~~--~~~ 238 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ------A-MKRIRDNLP-----PKL--KNL 238 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH------H-HHHHHhcCC-----CCC--ccc
Confidence 33458899999999988889999999999999999999999986432111 1 111111100 000 001
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+..+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 124467899999999999999999999986
No 296
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.1e-35 Score=303.83 Aligned_cols=246 Identities=26% Similarity=0.393 Sum_probs=197.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+.|+..+.||+|+||+||+|... +++.||+|..... ......++.+|+.+++.++||||+++++++.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999975 6899999987532 2344567899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||++ |+|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9996 67878776532 34899999999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
....++..|+|||++. ...++.++||||||+++|||++|+.||....... ... .+..+..
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~------~~~-~~~~~~~----- 231 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALY-HIAQNDS----- 231 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH------HHH-HHhcCCC-----
Confidence 2235788999999874 4568899999999999999999999986432111 000 1111100
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
........++.+.+++.+||+.+|++||++.+|+..
T Consensus 232 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 ---PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ---CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 001122345678999999999999999999999874
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-35 Score=300.77 Aligned_cols=253 Identities=27% Similarity=0.431 Sum_probs=206.7
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
..++|+..+.||+|++|.||+|.++ ++..+++|.+..... ..+.+.+|++++++++|+|++++++++...+..++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999987 688999999876544 56788999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999998753 35999999999999999999999998 9999999999999999999999999886554322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... .... +.......
T Consensus 171 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~------~~~~-~~~~~~~~------- 235 (286)
T cd06614 171 S-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR------ALFL-ITTKGIPP------- 235 (286)
T ss_pred h-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HHhcCCCC-------
Confidence 1 2223347889999999988889999999999999999999999986432211 1111 11111100
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.......+..+.++|.+||+.+|.+||++.++++.
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 236 LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00112245678999999999999999999999863
No 298
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.4e-36 Score=299.95 Aligned_cols=247 Identities=27% Similarity=0.448 Sum_probs=200.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcC---CCccceeeeEEEeCCcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQIN---HRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 392 (597)
.|+..+.||+|+||.||+|.+. +++.+|+|..... .....+++.+|+.++++++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4778889999999999999974 6899999987643 3445677889999999997 999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++... ++++..++.++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999998653 4899999999999999999999999 999999999999999999999999999776543
Q ss_pred CceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.. ......|+..|+|||.+.+ ..++.++|+||||+++|+|++|+.||......... ..+..... +.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-------~~~~~~~~-----~~ 221 (277)
T cd06917 155 SS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-------MLIPKSKP-----PR 221 (277)
T ss_pred cc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-------hccccCCC-----CC
Confidence 32 2233458889999998865 45789999999999999999999999754322110 00001000 00
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+. ....+.++.+++.+||+.+|++||++.++++
T Consensus 222 ~~---~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 222 LE---DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CC---cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 10 0114557889999999999999999999976
No 299
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.8e-36 Score=304.54 Aligned_cols=261 Identities=27% Similarity=0.340 Sum_probs=200.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccChh-----hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDET-----NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+|++.+.||+|++|.||+|... +++.||||.+...... ....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788889999999999999975 6899999987653322 345677899999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+ +++|.+++.... ..+++..++.++.||++||.|||+++ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997643 35999999999999999999999999 99999999999999999999999999976643
Q ss_pred CCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--------
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN-------- 542 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 542 (597)
... ......+++.|+|||.+.+ ..++.++||||||++++||++|.+||......+ ............
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 155 PNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred CCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH---HHHHHHHHcCCCchhhhhhc
Confidence 322 1222346788999998854 567899999999999999999987776533211 111111100000
Q ss_pred -chhhhhh-----HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 543 -RLFEALD-----ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 543 -~~~~~l~-----~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....... +..........+..+.++|.+||+.+|++|||++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 000001112335678899999999999999999999874
No 300
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.6e-36 Score=303.42 Aligned_cols=261 Identities=21% Similarity=0.308 Sum_probs=199.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 391 (597)
++|++.+.||+|++|.||+|... +++.+++|.++.... .....+.+|+.++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999986 588999998764332 2234577899999999999999999999877 889999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||++ ++|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+|||+++++.+||+|||++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 599999876432 5899999999999999999999999 99999999999999999999999999986654
Q ss_pred CCceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh----------
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN---------- 540 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 540 (597)
... ......+++.|+|||.+.+. .++.++|+||||+++++|++|+.||......+. .........
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 159 PLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ---LNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred Ccc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchHHHHHh
Confidence 321 12334478899999998654 468999999999999999999999975432211 110000000
Q ss_pred -------cCchhhhhhHHhhhhhhHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 -------ENRLFEALDARVLKEAKKE-EIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 -------~~~~~~~l~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...........+....... .++.+.+||.+||+.+|++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000001111111111 3567889999999999999999999985
No 301
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-35 Score=292.37 Aligned_cols=249 Identities=30% Similarity=0.446 Sum_probs=205.7
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
.|...+.||+|++|.||++... +++.+++|+...........+.+|+.++++++|+|++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3778889999999999999986 688999999876655567889999999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.... ..+++..+..++.|++.||.+||+.+ ++|+||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999998653 35899999999999999999999988 99999999999999999999999999877654332
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
.....++..|+|||.+....++.++||||||+++++|++|+.||...+..+ . ............. .
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~----~~~~~~~~~~~~~-------~ 219 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK---A----LFKIATNGPPGLR-------N 219 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH---H----HHHHHhcCCCCcC-------c
Confidence 334558889999999988889999999999999999999999986543111 0 0011111000000 0
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+..+.+++.+||+.||++|||+.++++
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112567899999999999999999999986
No 302
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.5e-36 Score=299.41 Aligned_cols=247 Identities=26% Similarity=0.339 Sum_probs=204.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
+|++.+.||+|+||.||++... +++.+|+|..... .....+.+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5888999999999999999976 5899999987642 23456789999999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++++|.+++... .++++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999764 35899999999999999999999999 9999999999999999999999999987654332
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
......++..|+|||.+.+..++.++|+||||+++|+|++|+.||....... ...+...... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~----------~~ 218 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET----------AD 218 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------cc
Confidence 2234558889999999988889999999999999999999999997654321 1112111111 00
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCH--HHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTM--KEVT 586 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~--~evl 586 (597)
...+...+..+.++|.+||+.+|.+||++ +|++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11123345678899999999999999999 6654
No 303
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-35 Score=300.17 Aligned_cols=264 Identities=23% Similarity=0.307 Sum_probs=197.6
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++++|.+.+.||+|+||.||+|... +++.+|+|.+.... ......+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999975 68899999876433 223346788999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+. ++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 67877776532 24788899999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc----------
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE---------- 541 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 541 (597)
... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ............
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 157 SQT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF--EQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH--HHHHHHHHHcCCCChhhhhhhh
Confidence 211 223346889999999875 457889999999999999999999997543211 000000000000
Q ss_pred --Cchh-hhhh---HHhhhhh--hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 --NRLF-EALD---ARVLKEA--KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 --~~~~-~~l~---~~~~~~~--~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.... +... +...... .......+.+++.+|++.||++|||++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000 0000 0000000 0112456889999999999999999999875
No 304
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=314.06 Aligned_cols=250 Identities=26% Similarity=0.376 Sum_probs=206.2
Q ss_pred CccCCcccccCceEEEEEEecC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 319 YNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
|++...||.|+||.||+|..++ +...|-|.+...+.+..++|+-||.||+..+||+||+|++.|...+.+++..|||+|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4555679999999999999875 445667888888888999999999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|.++.++-+-. .+|++.++..+.+|++.||.|||+.. |||||||+.|||++-+|.++|+|||.+..... .....
T Consensus 114 GAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkR 187 (1187)
T KOG0579|consen 114 GAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKR 187 (1187)
T ss_pred chHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-HHhhh
Confidence 99999988753 35999999999999999999999999 99999999999999999999999999865432 22345
Q ss_pred ecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 478 TKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
..+.|||.|||||++. ..+|+.++||||||++|.||..+.+|-...++.- +.-.+... ++..
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR-------VllKiaKS------ePPT 254 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKS------EPPT 254 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH-------HHHHHhhc------CCCc
Confidence 5677999999999863 4689999999999999999999999975433211 11111110 1111
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+. .+......+.+++.+||..||..||++.++++.
T Consensus 255 Ll-qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 255 LL-QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cc-CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 11 145667789999999999999999999999863
No 305
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-35 Score=303.89 Aligned_cols=266 Identities=23% Similarity=0.335 Sum_probs=199.4
Q ss_pred CCccCCcccccCceEEEEEEec---CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccce
Q 038707 318 NYNANRILGQGGQGTVYKGMLT---DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPL 389 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 389 (597)
+|++.+.||+|++|.||+|... +++.+|+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999975 47899999877532 34456788999999999999999999999988 7899
Q ss_pred EEEeccCCCChhhHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC----CCcEEEeec
Q 038707 390 LVYEFIPNGTLYQYIHNQIE--EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDF 463 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~----~~~~kl~Df 463 (597)
+||||+++ +|.+++..... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 77777754322 236899999999999999999999999 999999999999999 999999999
Q ss_pred cccccccCCCc--eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH------HH
Q 038707 464 GTSRSVMVDQT--HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV------GY 534 (597)
Q Consensus 464 gl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~------~~ 534 (597)
|++........ .......++..|+|||.+.+ ..++.++||||||++|++|++|+.||............ ..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543222 12233457889999998766 45899999999999999999999999865543311100 00
Q ss_pred HHHHHhc------------Cchhhhh--------h-HHhhhhhhH--HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 535 FLQAINE------------NRLFEAL--------D-ARVLKEAKK--EEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 535 ~~~~~~~------------~~~~~~l--------~-~~~~~~~~~--~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+...+.. ....... . ..+...... ....++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0000000 0 000000011 33456889999999999999999999985
No 306
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.1e-36 Score=297.21 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=201.8
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|+||.||++... ++..+|+|..... .....+.+.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788899999999999999976 5889999987542 223456788999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++.... ...+++..+..++.|+++||.|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999997643 235899999999999999999999999 99999999999999885 46999999987654322
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
.......|++.|+|||.+....++.++|+||||+++++|++|+.||...... ....... .+..
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~--------- 219 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLKIC-QGYF--------- 219 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHh-cccC---------
Confidence 1222345888999999998888999999999999999999999998643211 1111111 1111
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.......+..+.+++.+||+.+|++|||+.++++.
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01112334568899999999999999999999863
No 307
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.5e-36 Score=323.72 Aligned_cols=268 Identities=20% Similarity=0.285 Sum_probs=192.1
Q ss_pred HhcCCccCCcccccCceEEEEEEecC--CcEEEEE------------------EccccChhhHHHHHHHHHHHhhcCCCc
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTD--GRIVAVK------------------KSKLVDETNVEQFINEVVILSQINHRN 374 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~vaiK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~n 374 (597)
..++|++.+.||+|+||+||++..+. ++..++| +.. ........+.+|+.+|++++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999999987542 2222222 111 12233556889999999999999
Q ss_pred cceeeeEEEeCCcceEEEeccCCCChhhHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe
Q 038707 375 IVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIE--EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL 452 (597)
Q Consensus 375 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll 452 (597)
|+++++++.+.+..++|+|++. ++|.+++..... ........+..++.||+.||.|||+++ |+||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 9999999999999999999984 578887754321 112346678889999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCC-CCCCCCcCCCcH
Q 038707 453 DDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP-IRAINTDEDKSL 531 (597)
Q Consensus 453 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p-~~~~~~~~~~~~ 531 (597)
+.++.+||+|||+++..............||..|+|||++.+..++.++||||||++||||++|..+ +..........+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999987654433334446799999999999999999999999999999999998754 433222211111
Q ss_pred HHHHHHHHh--cC-------chhhhhhHHhhhh----h-----hHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 532 VGYFLQAIN--EN-------RLFEALDARVLKE----A-----KKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 532 ~~~~~~~~~--~~-------~~~~~l~~~~~~~----~-----~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.... ..+. .. .+++.++...... . ....+..+.++|.+||+.||.+|||+.|+++.
T Consensus 381 ~~~~-~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 381 LKII-DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHH-HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111 0000 00 0011111000000 0 01123457788999999999999999999863
No 308
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.3e-35 Score=299.79 Aligned_cols=260 Identities=24% Similarity=0.338 Sum_probs=200.1
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceEEEe
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLLVYE 393 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 393 (597)
|++.+.||+|++|.||+|... +++.+|+|.+.... ......+.+|+.++++++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58899999987642 34456788999999999999999999999988 88999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+++ +|.+++.... ..+++..++.++.||++||+|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9974 8988887542 35899999999999999999999999 9999999999999999999999999998765443
Q ss_pred ceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc---Cc------
Q 038707 474 THLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE---NR------ 543 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~------ 543 (597)
........++..|+|||.+.+ ..++.++||||||++++||++|+.||........ .......... ..
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhcccccc
Confidence 222333456788999998764 4679999999999999999999999975442211 1111110000 00
Q ss_pred --------hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 544 --------LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 544 --------~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
........+........+..+.+++++||+.+|.+||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000111111112667899999999999999999999986
No 309
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-35 Score=301.17 Aligned_cols=263 Identities=22% Similarity=0.326 Sum_probs=198.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCc-----
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEV----- 387 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 387 (597)
++|++.+.||+|+||.||+|.+. +++.||||...... ......+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999976 68999999866432 223467889999999995 6999999999987665
Q ss_pred ceEEEeccCCCChhhHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeecc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIE--EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFG 464 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfg 464 (597)
.++||||+++ +|.+++..... ...+++..++.++.||++||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 89998875432 246899999999999999999999999 999999999999998 8899999999
Q ss_pred ccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
++......... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||......+ .+.. +........
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~-~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLH-IFKLLGTPT 232 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH-HHHHhCCCC
Confidence 98765332211 122346788999998765 567999999999999999999999997543211 1110 111110000
Q ss_pred --hh------------hhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 544 --LF------------EALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 544 --~~------------~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.. ....+..........++++.+||.+||+.||.+||+++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 000000111111235667899999999999999999999875
No 310
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.9e-35 Score=298.01 Aligned_cols=257 Identities=23% Similarity=0.309 Sum_probs=194.4
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCccceeeeEEEeC--CcceEEEe
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQIN-HRNIVKLLGCCLET--EVPLLVYE 393 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 393 (597)
|++.+.||+|+||.||+|... +++.+|+|+.+... ........+|+.++.++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999975 68899999876432 222334567899999885 99999999999987 88999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|++ ++|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||++.......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 58888887543 35899999999999999999999999 999999999999999 999999999997654322
Q ss_pred ceeeecccccccccCccccc-cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHH-----------hc
Q 038707 474 THLTTKVQGTFGYVDPEYFQ-SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI-----------NE 541 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~ 541 (597)
. .....++..|+|||.+. +..++.++||||||+++|||++|+.||...+..+ ......... ..
T Consensus 154 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 154 P--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred C--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhcc
Confidence 2 22345788999999764 4567899999999999999999999997643221 111111100 00
Q ss_pred CchhhhhhHH----hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 NRLFEALDAR----VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 ~~~~~~l~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
........+. .........+..+.+||.+||+.+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000 001112244678999999999999999999999986
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.9e-35 Score=301.31 Aligned_cols=245 Identities=26% Similarity=0.408 Sum_probs=196.7
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
|...+.||+|+||.||++... ++..+|+|.+... .......+.+|+.++++++|||++++++++.+.+..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 677789999999999999975 6889999987632 233456789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
++ |+|.+++... ..++++.++..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 107 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 96 5888877653 234899999999999999999999999 99999999999999999999999998865432
Q ss_pred eeeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 475 HLTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.....+++.|+|||.+. ...++.++||||||+++|||++|+.||......+ ..........
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~~-------- 241 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNES-------- 241 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhccC--------
Confidence 12345788999999973 4568999999999999999999999986432111 1111111110
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
........++.+.+|+.+||+.+|.+||++.++++.+
T Consensus 242 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 -PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 0111223455688999999999999999999999864
No 312
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.8e-35 Score=293.49 Aligned_cols=248 Identities=27% Similarity=0.420 Sum_probs=205.6
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||++... +++.+++|..... ......++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999865 6889999987643 345567888999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++.+.. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999987632 2345899999999999999999999999 999999999999999999999999999776543
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
......+++.|+|||.+.+..++.++|+||||+++++|++|+.||...+..+ +......+..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 218 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-------LRYKVQRGKY--------- 218 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCC---------
Confidence 2223457889999999998899999999999999999999999996543221 1122222211
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.......+.++.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1122345567899999999999999999999986
No 313
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.6e-35 Score=298.91 Aligned_cols=260 Identities=25% Similarity=0.353 Sum_probs=197.7
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
|++.+.||.|++|.||+|... +|+.||+|++.... ......+.+|+.++++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999975 68999999876432 233467889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
+ ++|.+++..... ..+++..++.++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 689999876532 35899999999999999999999998 999999999999999999999999999765322211
Q ss_pred eeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--c----hhhh-
Q 038707 476 LTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN--R----LFEA- 547 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~- 547 (597)
.....++..|+|||++.+. .++.++||||||+++|+|++|+.||....... .+...+ ...... . ....
T Consensus 156 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 156 -YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIF-RTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred -cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH-HHhCCCChHHhhhhhhch
Confidence 1223467889999987654 57899999999999999999999996543211 011100 000000 0 0000
Q ss_pred --------hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 --------LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 --------l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.............+..+.++|.+||+.+|.+|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000001111223467889999999999999999999985
No 314
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-35 Score=298.13 Aligned_cols=259 Identities=19% Similarity=0.286 Sum_probs=187.9
Q ss_pred hcCCccCCcccccCceEEEEEEecC----CcEEEEEEccccChhhH-----------HHHHHHHHHHhhcCCCccceeee
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLVDETNV-----------EQFINEVVILSQINHRNIVKLLG 380 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~ 380 (597)
.++|++.++||+|+||+||+|...+ +..+|+|.......... .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4679999999999999999999754 45667775443222111 11233445566778999999999
Q ss_pred EEEeCC----cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC
Q 038707 381 CCLETE----VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY 456 (597)
Q Consensus 381 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~ 456 (597)
+..... ..++++|++. .++.+.+.... ..++..+..++.|+++||+|||+.+ |+||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence 876544 3367788764 36666665432 2578889999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccccCCCce------eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCc
Q 038707 457 RAKVSDFGTSRSVMVDQTH------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKS 530 (597)
Q Consensus 457 ~~kl~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~ 530 (597)
.+||+|||+++........ ......||+.|+|||++.+..++.++||||||++|+||++|+.||........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~-- 241 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN-- 241 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--
Confidence 9999999999866432211 12234589999999999999999999999999999999999999986532221
Q ss_pred HHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 531 LVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.. .......+..+...... ....+..+.+++..|++.+|++||++.++++.|+
T Consensus 242 ~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 242 LI----HAAKCDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HH----HHhHHHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 11 00000000111111110 1223567899999999999999999999998874
No 315
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.2e-35 Score=291.66 Aligned_cols=250 Identities=32% Similarity=0.444 Sum_probs=206.7
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||++... +++.+++|+..... .....++.+|++++++++|+|++++++.+.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999976 58899999877543 35677899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+++++|.+++.+.. ....+++..+..++.++++||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998742 1346999999999999999999999998 9999999999999999999999999997654432
Q ss_pred ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 474 THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
.......+++.|+|||.+....++.++|+||||+++++|++|+.||...... ....... ....
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~-~~~~--------- 220 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKIL-KGQY--------- 220 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHh-cCCC---------
Confidence 2333446888999999998888999999999999999999999998643311 1111111 1111
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+...+..+.+++.+||..+|++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1112234566889999999999999999999986
No 316
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8.9e-36 Score=308.60 Aligned_cols=262 Identities=24% Similarity=0.353 Sum_probs=197.7
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 388 (597)
.++|++.+.||+|++|.||+|... +++.||||.+... .......+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999965 6899999988643 2334567889999999999999999999876543 47
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++++||++ ++|.+++... .+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 89999996 4888877543 4899999999999999999999999 99999999999999999999999999876
Q ss_pred ccCCCce--eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch-
Q 038707 469 VMVDQTH--LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL- 544 (597)
Q Consensus 469 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 544 (597)
....... ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQE 232 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHH
Confidence 5432211 1223457889999998654 568999999999999999999999996533211 11111111110000
Q ss_pred --hhhhhHHh--------------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 545 --FEALDARV--------------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 545 --~~~l~~~~--------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
..+.+... ........+.++.+|+.+||+.+|++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 000111235668899999999999999999999886
No 317
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.2e-35 Score=292.87 Aligned_cols=249 Identities=26% Similarity=0.377 Sum_probs=199.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--Ccc
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-----DETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVP 388 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 388 (597)
.+|++.+.||+|++|.||+|.+. +++.+|+|.+... .......+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47899999999999999999975 5899999986432 234456889999999999999999999998764 457
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++++||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999997542 4889999999999999999999999 99999999999999999999999999976
Q ss_pred ccCCC--ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 469 VMVDQ--THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 469 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
..... ........++..|+|||.+.+..++.++|+||||+++++|++|+.||......+ .+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~----- 224 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA------AIFKIATQ----- 224 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH------HHHHHHcC-----
Confidence 53211 111223458889999999988889999999999999999999999996432111 11111110
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......+....+.+.+++.+||+ +|..||+..++++
T Consensus 225 ----~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 ----PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 01112234455678999999998 5799999998875
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.9e-35 Score=305.91 Aligned_cols=261 Identities=23% Similarity=0.344 Sum_probs=199.7
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC----
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETE---- 386 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 386 (597)
...++|++.+.||+|+||.||++... +++.||||.+.. .......++.+|+.++++++||||+++++++....
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34578999999999999999999975 689999998753 23445567889999999999999999999986443
Q ss_pred --cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 387 --VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 387 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
..++||||+. ++|.+.+... +++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCc
Confidence 4689999995 5888887642 889999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh----
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN---- 540 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---- 540 (597)
+++...... ......++..|+|||.+.+..++.++||||||+++++|++|+.||...+.... .........
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 238 (353)
T cd07850 164 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ---WNKIIEQLGTPSD 238 (353)
T ss_pred cceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHhcCCCCH
Confidence 997653322 12334578899999999999999999999999999999999999975432110 000000000
Q ss_pred ---------------cCc------hhhhhhHHhh----hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 541 ---------------ENR------LFEALDARVL----KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 541 ---------------~~~------~~~~l~~~~~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
... +.+....... .......+..+.++|.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000000000 00011235568899999999999999999999863
No 319
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.3e-35 Score=303.73 Aligned_cols=263 Identities=25% Similarity=0.349 Sum_probs=198.4
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 390 (597)
.++|++.+.||+|+||.||+|... +|+.||+|....... .....+.+|+.++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357999999999999999999976 589999998764322 2234567899999999999999999998765 46799
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
||||+. ++|.+++.... ..+++.+++.++.||++||.|||+.+ ++||||||+||++++++.+||+|||++....
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 58888887642 35899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc--Cchhhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE--NRLFEA 547 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 547 (597)
... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...+..+ ........... ......
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 160 LPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIWPG 235 (309)
T ss_pred Ccc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhchh
Confidence 332 11222345788999999865 568999999999999999999999997543222 11111111100 000000
Q ss_pred h-----------hHHh---hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 L-----------DARV---LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 l-----------~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
+ .... ........++.+.+||.+||+.||++|||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0000 000011135667899999999999999999999863
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.1e-35 Score=290.84 Aligned_cols=250 Identities=27% Similarity=0.453 Sum_probs=206.2
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeC--CcceEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLET--EVPLLVY 392 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 392 (597)
+|...+.||+|++|.||+|... +++.|++|...... ....+.+.+|+.++++++|+||+++++.+.+. +..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999986 68999999876543 35678899999999999999999999999988 8899999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||+++++|.+++.... .+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999998653 5999999999999999999999998 999999999999999999999999998876543
Q ss_pred Cce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 473 QTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 473 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
... ......++..|+|||.+.....+.++||||||+++++|++|..||.... ......... .. ..
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~-~~--------~~ 220 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKI-GS--------SG 220 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhc-cc--------cC
Confidence 321 1233458889999999988889999999999999999999999997544 111111111 10 00
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+...+..+.++|.+||+.+|++||++.+++.
T Consensus 221 ~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111122334677999999999999999999999986
No 321
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-35 Score=308.16 Aligned_cols=266 Identities=21% Similarity=0.316 Sum_probs=202.6
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----c
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----V 387 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 387 (597)
.++|.+.+.||+|+||+||++... +++.||||.+... .......+.+|+.+++.++|+||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457999999999999999999975 6899999987642 2334567788999999999999999999886543 4
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.++|+||+. ++|.+++... .++++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999995 6898888753 34999999999999999999999999 9999999999999999999999999997
Q ss_pred cccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh------
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN------ 540 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------ 540 (597)
...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||...+..+ ..........
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~ 232 (337)
T cd07858 157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSEED 232 (337)
T ss_pred ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCChHH
Confidence 654322 22233457889999998765 568999999999999999999999997543211 1111111110
Q ss_pred -----cCchhhhhh-------HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhhh
Q 038707 541 -----ENRLFEALD-------ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE--LGGIR 593 (597)
Q Consensus 541 -----~~~~~~~l~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~--L~~l~ 593 (597)
.......+. ... .......++++.+||++||+.+|++|||++++++. |+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000000000 000 01112345678999999999999999999999987 65544
No 322
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.5e-35 Score=292.17 Aligned_cols=242 Identities=27% Similarity=0.326 Sum_probs=196.3
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||.|++|.||++... +++.+|+|..... .....+.+.+|+.++++++||||+++++.+.+.+..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999976 4889999987542 223456799999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecc
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKV 480 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 480 (597)
.+++.+.. .+++..+..++.||++||.|||+.+ ++|+||+|+||+++.++.+||+|||++....... .....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~ 152 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTF 152 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccc
Confidence 99997642 3899999999999999999999999 9999999999999999999999999998764332 22334
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
.++..|++||.+....++.++|+||||+++|+|++|+.||.....+. ......... +. .....+...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~-~~--------~~~~~~~~~ 219 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILK-GN--------GKLEFPNYI 219 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhc-cC--------CCCCCCccc
Confidence 57889999999988889999999999999999999999997644211 111111110 00 001112223
Q ss_pred HHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRPT-----MKEVTN 587 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt-----~~evl~ 587 (597)
++.+.+++.+||+.+|++||+ ++|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 567899999999999999999 677665
No 323
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.7e-35 Score=301.63 Aligned_cols=266 Identities=27% Similarity=0.369 Sum_probs=200.1
Q ss_pred HHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC---
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETE--- 386 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 386 (597)
+...++|++.+.||+|++|.||+|..+ +++.||+|.+.... ......+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345678999999999999999999986 58899999876532 233456788999999999999999999987655
Q ss_pred -------cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEE
Q 038707 387 -------VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAK 459 (597)
Q Consensus 387 -------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~k 459 (597)
..++|+||+++ +|.+++... ...+++..+..++.||+.||+|||+.+ |+|+||||+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEE
Confidence 78999999976 777777654 235899999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHH
Q 038707 460 VSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQA 538 (597)
Q Consensus 460 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 538 (597)
|+|||++...............++..|+|||.+.+ ..++.++||||||+++++|++|++||...... .....+...
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~---~~~~~~~~~ 233 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL---AQLELISRL 233 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHH
Confidence 99999998664433222222345778999998764 45789999999999999999999999743321 111111111
Q ss_pred HhcCc-----------hhhhhhHH-----hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 539 INENR-----------LFEALDAR-----VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 539 ~~~~~-----------~~~~l~~~-----~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..... .....+.. .........+..+.+++.+||+.+|.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 10000 00000000 000001123567899999999999999999999985
No 324
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.4e-35 Score=295.26 Aligned_cols=242 Identities=24% Similarity=0.310 Sum_probs=188.2
Q ss_pred cccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhh---cCCCccceeeeEEEeCCcceEEEeccC
Q 038707 324 ILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQ---INHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
+||+|+||.||++... +++.+|+|.+.... ......+.+|..+++. .+||||+++++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 58999999765321 2222334455444433 479999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999987543 4999999999999999999999999 9999999999999999999999999986543221
Q ss_pred eecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....|+..|+|||.+.+ ..++.++||||||+++++|++|+.||......... ....... .....
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~----------~~~~~ 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTL----------TVNVE 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH----HHHHHhh----------cCCcC
Confidence 123458999999999864 56899999999999999999999999754332211 1111100 00111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
.+...+.++.+++.+||+.||++|| +++++++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 2234556788999999999999999 69988874
No 325
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4e-35 Score=297.52 Aligned_cols=243 Identities=27% Similarity=0.421 Sum_probs=198.5
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChh
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
..||+|+||.||++... +++.||||+...........+.+|+.+++.++|+||+++++.+...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999975 68999999987656666778999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeeccc
Q 038707 402 QYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQ 481 (597)
Q Consensus 402 ~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 481 (597)
+++... .+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....... .......
T Consensus 106 ~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~ 177 (292)
T cd06657 106 DIVTHT----RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV 177 (292)
T ss_pred HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence 987543 3899999999999999999999999 9999999999999999999999999987654322 1223345
Q ss_pred ccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHH
Q 038707 482 GTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEI 561 (597)
Q Consensus 482 gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 561 (597)
+++.|+|||.+.+..++.++|+||||+++|+|++|+.||......+ ....+... +..... .....+
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-------~~~~~~~~-----~~~~~~--~~~~~~ 243 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-------AMKMIRDN-----LPPKLK--NLHKVS 243 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhh-----CCcccC--CcccCC
Confidence 7889999999988889999999999999999999999986432211 11111110 000000 012234
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 562 MTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 562 ~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+.+++.+||+.+|.+||++.++++
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 56789999999999999999999987
No 326
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6e-35 Score=289.29 Aligned_cols=247 Identities=29% Similarity=0.476 Sum_probs=204.0
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|++.+.||+|++|.||++... +++.+++|....... ...+.+.+|++++++++|+|++++++++.+.+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999876 578999998776443 5667899999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+++++|.+++... .++++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999999764 35899999999999999999999999 99999999999999999999999999987654332
Q ss_pred eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 475 HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
. .....++..|+|||.+.+..++.++||||||+++++|++|+.||...... .... . ...... .
T Consensus 155 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-----~~~~-~-~~~~~~---------~ 217 (254)
T cd06627 155 D-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-----AALF-R-IVQDDH---------P 217 (254)
T ss_pred c-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-----HHHH-H-HhccCC---------C
Confidence 1 23345788999999998888899999999999999999999998643311 1111 1 111100 1
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...++.+.+++.+||..+|++|||+.+++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 112233567889999999999999999999975
No 327
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.7e-35 Score=297.06 Aligned_cols=254 Identities=28% Similarity=0.405 Sum_probs=195.4
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|...+.||+|+||.||++... +++.+|+|.+... .......+.+|+.++.++. |+||+++++++.+....+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3555678999999999999976 5899999987643 2345667899999999996 99999999999999999999999
Q ss_pred cCCCChhhHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 395 IPNGTLYQYIHN--QIEEFPITWELLLRIAVEVSGALFYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 395 ~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
++ ++|.++... ......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 86 455554321 11224589999999999999999999975 7 99999999999999999999999999976543
Q ss_pred CCceeeecccccccccCccccccC---CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSS---QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
... .....++..|+|||.+... .++.++||||||+++|+|++|+.||.... ............ .
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~-~----- 227 (288)
T cd06616 161 SIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKG-D----- 227 (288)
T ss_pred CCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCC-C-----
Confidence 221 1233578899999998766 68999999999999999999999996432 111111111110 0
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+.+........+.++.+|+.+||+.+|++|||+++|++.
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111123356678999999999999999999999874
No 328
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.1e-35 Score=294.43 Aligned_cols=244 Identities=26% Similarity=0.312 Sum_probs=193.8
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|+||+||++... +++.+|+|.+... .......+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 6899999987532 222345678899999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecc
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKV 480 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 480 (597)
.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGR 154 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC--Cccccc
Confidence 999986532 35899999999999999999999999 999999999999999999999999998765432 112234
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
.++..|+|||.+.+..++.++||||||+++++|++|+.||.......... ........ .....+...
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~----------~~~~~~~~~ 221 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE---ELKRRTLE----------MAVEYPDKF 221 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH---HHHhcccc----------ccccCCccC
Confidence 57889999999988889999999999999999999999997544321110 01010000 001112234
Q ss_pred HHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
++.+.+++.+||+.+|++|| ++.++++
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 56788999999999999999 6666654
No 329
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.8e-35 Score=296.78 Aligned_cols=259 Identities=25% Similarity=0.350 Sum_probs=201.5
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
|++.+.||+|++|.||++... +++.+++|+...... .....+.+|+.++++++|+||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999975 688999998764322 34567889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
++ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-R 153 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-c
Confidence 75 8888887643 35899999999999999999999999 9999999999999999999999999997765433 1
Q ss_pred eeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC--chhhhh----
Q 038707 476 LTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN--RLFEAL---- 548 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l---- 548 (597)
......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+. ........... .....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCchHhcccchhhh
Confidence 22234577889999998776 789999999999999999999999965442211 11111100000 000000
Q ss_pred ----------hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 549 ----------DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 549 ----------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
............+.++.++|.+||+.||.+||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000001122345678999999999999999999999986
No 330
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-35 Score=293.37 Aligned_cols=245 Identities=29% Similarity=0.386 Sum_probs=197.3
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEccccCh---hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE---TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|+||.||++... +++.+++|....... ...+.+.+|+.++++++||||+++++.+.+....++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999998764333 4567889999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc------
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT------ 474 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~------ 474 (597)
.+++.+.. .+++..++.++.||++||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998643 4899999999999999999999999 99999999999999999999999999876543321
Q ss_pred -eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhh
Q 038707 475 -HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVL 553 (597)
Q Consensus 475 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (597)
.......++..|+|||.+.....+.++||||||+++++|++|+.||......+ .+ ..+..+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~-~~~~~~~~~-------- 219 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IF-QNILNGKIE-------- 219 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HH-HHHhcCCcC--------
Confidence 12233457889999999988889999999999999999999999996543211 11 111111110
Q ss_pred hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 038707 554 KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELG 590 (597)
Q Consensus 554 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~ 590 (597)
.......+..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0000112567889999999999999999955555543
No 331
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.2e-35 Score=304.64 Aligned_cols=266 Identities=27% Similarity=0.365 Sum_probs=199.8
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCC--cc
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETE--VP 388 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~~ 388 (597)
..++|++.+.||+|+||.||+|.+. +++.+|+|++.. ........+.+|+.+++++ +||||+++++++...+ ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567899999999999999999976 588999998753 2334556788899999999 9999999999986543 67
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||++ ++|.+++... .+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5999988753 4889999999999999999999999 99999999999999999999999999986
Q ss_pred ccCCCc----eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHH--------
Q 038707 469 VMVDQT----HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF-------- 535 (597)
Q Consensus 469 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~-------- 535 (597)
...... .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643322 12233458899999998755 56789999999999999999999999654322110000000
Q ss_pred HHHHhcCchhhhhhH------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 536 LQAINENRLFEALDA------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
...+.......+++. ..........+.++.++|.+||+.+|++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000000000000 00001111235678999999999999999999999975
No 332
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.2e-35 Score=299.66 Aligned_cols=262 Identities=24% Similarity=0.339 Sum_probs=194.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc------
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEV------ 387 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 387 (597)
++|++.+.||+|+||.||++... +++.||||.+.... ......+.+|+.++++++||||+++++++...+.
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 56999999999999999999976 68999999875432 2223456789999999999999999999876544
Q ss_pred --ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 388 --PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 388 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
.++||||+. ++|.+++.... ..+++.+++.++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 499999996 48888876532 34899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCce---eeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 466 SRSVMVDQTH---LTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 466 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
+......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||........ ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~---~~~~~~~~~~ 242 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ---LTLISQLCGS 242 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCC
Confidence 9765432221 12233467889999988664 478899999999999999999999975432211 1111111000
Q ss_pred --------CchhhhhhH---------Hhhhhh-hHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 --------NRLFEALDA---------RVLKEA-KKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 --------~~~~~~l~~---------~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+..+. ...... .......+.+||.+||+.||.+|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000000 000000 0011345679999999999999999999985
No 333
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.7e-35 Score=304.74 Aligned_cols=265 Identities=23% Similarity=0.345 Sum_probs=199.9
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEe----CCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLE----TEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 388 (597)
.++|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 468999999999999999999975 68999999876432 2345678889999999999999999998763 3467
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 89999995 6899988653 24899999999999999999999999 99999999999999999999999999876
Q ss_pred ccCCCce---eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH--------HHH
Q 038707 469 VMVDQTH---LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG--------YFL 536 (597)
Q Consensus 469 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~--------~~~ 536 (597)
....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+......... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 5432211 1233468889999999765 568999999999999999999999997543221100000 000
Q ss_pred HHHhcCchhhhhhHHh------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 537 QAINENRLFEALDARV------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.......+.+..+... ........+.++.++|.+||+.+|.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0001111111111000 00111234677999999999999999999999886
No 334
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=303.11 Aligned_cols=248 Identities=26% Similarity=0.369 Sum_probs=209.1
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
....|.+.+.||+|.|++|.+|.+. ++..||||.+.. .+....+.+.+|+++|..++|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3467999999999999999999975 699999998664 3344556799999999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||..+|.+++|+.++.. +.+..+..++.|+.+|++|||++. |+|||||++||||+.+-++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999998654 667889999999999999999999 9999999999999999999999999998764
Q ss_pred CCceeeecccccccccCccccccCCC-CcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQF-TEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
.........|++.|.|||++.+.+| ++++|+||+|++||.|+.|..||++-...+..... ..+++
T Consensus 207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv-------l~gk~------ 272 (596)
T KOG0586|consen 207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV-------LRGKY------ 272 (596)
T ss_pred -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh-------eeeee------
Confidence 4445667789999999999998766 68999999999999999999999875544421110 00110
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+.....+..+||+++|-.+|.+|++++++.+
T Consensus 273 ----rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 273 ----RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ----cccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 112333445778999999999999999999875
No 335
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6e-35 Score=296.53 Aligned_cols=261 Identities=22% Similarity=0.321 Sum_probs=197.3
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++|++.+.||+|++|+||+|..+ +++.||+|...... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46889999999999999999976 68999999876432 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeeccccccccCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~~~~~~ 472 (597)
|++ ++|.+++.... ...+++..+..++.||+.||+|||+.+ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 58888876542 234688899999999999999999998 999999999999985 557999999999765332
Q ss_pred CceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh---
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL--- 548 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--- 548 (597)
. .......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+ ............ ..+..
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~---~~~~~~~~~~~~-~~~~~~~~ 231 (294)
T PLN00009 157 V-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID---ELFKIFRILGTP-NEETWPGV 231 (294)
T ss_pred c-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCC-Chhhcccc
Confidence 1 11223356889999998865 457899999999999999999999997543211 110000000000 00000
Q ss_pred -------------hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 549 -------------DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 549 -------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
............++++.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000111233566889999999999999999999986
No 336
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-34 Score=288.99 Aligned_cols=243 Identities=26% Similarity=0.305 Sum_probs=189.6
Q ss_pred CcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHH-HhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVI-LSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
+.||+|++|.||+|... +++.||+|...... ......+..|..+ ....+|+|++++++++.+.+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999975 58999999876432 2222334455544 4455899999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
++|.+++.... ++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++..... .
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~ 150 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----N 150 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----c
Confidence 99999997542 4899999999999999999999999 99999999999999999999999999875432 2
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
....++..|+|||.+.+..++.++||||||+++|+|++|..||......+ ....+..+... ......
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~------~~~~~~ 217 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-------VFDNILSRRIN------WPEEVK 217 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhcccC------CCCccc
Confidence 23457889999999988889999999999999999999999996533211 11111111110 000111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 558 KEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 558 ~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
...+..+.+++.+||+.+|++||++.++.+.|
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 23456789999999999999999876555544
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.7e-35 Score=295.24 Aligned_cols=255 Identities=23% Similarity=0.288 Sum_probs=201.0
Q ss_pred CCccCCcccccCceEEEEEEec----CCcEEEEEEccccC----hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT----DGRIVAVKKSKLVD----ETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
+|++.+.||+|++|.||++... +++.+|||.++... ......+.+|+.++.++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999853 47889999876422 22345688999999999 599999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||+++++|.+++... ..+++..+..++.|++++|.|||+.+ ++|+||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998753 24889999999999999999999998 99999999999999999999999999876
Q ss_pred ccCCCceeeecccccccccCccccccCC--CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 469 VMVDQTHLTTKVQGTFGYVDPEYFQSSQ--FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 469 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
.............++..|+|||.+.+.. .+.++||||||+++++|++|..||....... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~----- 227 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKS----- 227 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHcc-----
Confidence 5543333333445889999999987654 7889999999999999999999986432111 111111111100
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
....+...+..+.+++.+||+.+|++|||+.++.+.|+-
T Consensus 228 ------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 001122234568899999999999999999888777653
No 338
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.6e-34 Score=294.71 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=192.4
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCC
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGT 399 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 399 (597)
.+.+|.|+++.|+++.. +++.||||++... .......+.+|+.++++++|+||+++++++.+.+..+++|||+++++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555544 6899999987653 45566789999999999999999999999999999999999999999
Q ss_pred hhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce----
Q 038707 400 LYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH---- 475 (597)
Q Consensus 400 L~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~---- 475 (597)
|.+++..... ..+++..+..++.|+++||.|||+++ |+||||||+||+++.++.+||+|||.+.........
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999986532 34889999999999999999999999 999999999999999999999999988655322111
Q ss_pred --eeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh----
Q 038707 476 --LTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA---- 547 (597)
Q Consensus 476 --~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 547 (597)
......++..|+|||++.. ..++.++||||||++++||++|+.||....... .. ...... .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~----~~~~~~-~~~~~~~~~ 234 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--ML----LEKVRG-TVPCLLDKS 234 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HH----HHHHhc-cCccccccC
Confidence 1122346778999999866 458899999999999999999999997543211 11 111100 00000
Q ss_pred ----------------hh----HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 ----------------LD----ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 ----------------l~----~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+ .............++.+|+.+||+.||++|||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 001111123345678899999999999999999999873
No 339
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.3e-34 Score=297.09 Aligned_cols=255 Identities=21% Similarity=0.321 Sum_probs=193.6
Q ss_pred Cccccc--CceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 323 RILGQG--GQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G--~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
..||+| +|++||++.+. +++.||+|..... .....+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999975 6999999987643 334467889999999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee-
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL- 476 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~- 476 (597)
++|.+++.+... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|++||+.+..........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 999999986532 24899999999999999999999999 9999999999999999999999998654332111110
Q ss_pred -----eecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc------
Q 038707 477 -----TTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR------ 543 (597)
Q Consensus 477 -----~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 543 (597)
.....++..|+|||++.+ ..++.++||||||++++||++|+.||......+. .........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~ 233 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM------LLQKLKGPPYSPLDI 233 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH------HHHHhcCCCCCCccc
Confidence 011224567999999876 3478999999999999999999999975432110 001000000
Q ss_pred ------------------------------hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 544 ------------------------------LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 544 ------------------------------~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.....+..............+.+|+++||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00001111111223345678899999999999999999999975
No 340
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.1e-35 Score=303.80 Aligned_cols=266 Identities=26% Similarity=0.375 Sum_probs=205.8
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cce
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VPL 389 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 389 (597)
+|++.+.||+|++|.||++... +++.+|||++.... ....+.+.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999976 48999999876533 445678999999999999999999999988775 789
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
++|||++ ++|.+++.... ++++..++.++.||+.||.|||+.+ |+|+||||+|||+++++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58988887543 5999999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCc--eeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHH-------
Q 038707 470 MVDQT--HLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI------- 539 (597)
Q Consensus 470 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~------- 539 (597)
..... .......++..|+|||.+.+. .++.++||||||+++++|++|+.||......+.... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~ 230 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL---IVEVLGTPSEED 230 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHH---HHHhcCCCChhH
Confidence 54321 122334578899999999887 889999999999999999999999976543221000 00000
Q ss_pred ----hcCchhhhhhH------HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhhh
Q 038707 540 ----NENRLFEALDA------RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE--LGGIR 593 (597)
Q Consensus 540 ----~~~~~~~~l~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~--L~~l~ 593 (597)
........+.. ..........+..+.+++.+||+.+|++||+++++++. |++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000000000 00001112245678999999999999999999999985 55544
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.4e-34 Score=295.84 Aligned_cols=246 Identities=25% Similarity=0.377 Sum_probs=196.1
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
.|...+.||+|++|.||+|... +++.+|+|.... .......++.+|+++++.++|+|++++++++.+....++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999975 578999998753 233445678899999999999999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+. ++|.+++.... .++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 996 68888776532 34899999999999999999999998 999999999999999999999999998754322
Q ss_pred ceeeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 474 THLTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 474 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
....+++.|+|||.+. ...++.++||||||+++|+|++|+.||......+ .......+...
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~----- 232 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNESP----- 232 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-------HHHHHhhcCCC-----
Confidence 2345788999999874 3568889999999999999999999986532211 00111111110
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
.......+..+.+||.+||+.+|++||++.++++.-
T Consensus 233 ---~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 233 ---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ---CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 011223456688999999999999999999998753
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.3e-34 Score=286.98 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=191.3
Q ss_pred HHHhcCCccCCcc--cccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 313 EKATDNYNANRIL--GQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 313 ~~~~~~y~~~~~l--g~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
....++|++.+.+ |+|+||.||++... +++.+|+|.......... |+.....+ +||||+++++.+...+..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3344667777766 99999999999975 688899998764221111 22222222 699999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSR 467 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~ 467 (597)
++||||+++++|.+++.... +++++++..++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++.
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 99999999999999998653 5999999999999999999999999 99999999999999998 99999999987
Q ss_pred cccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
..... ....++..|+|||++.+..++.++||||||+++++|++|+.||.....++ ..... ..... ..
T Consensus 159 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~-~~----- 225 (267)
T PHA03390 159 IIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLES-LLKRQ-QK----- 225 (267)
T ss_pred ecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHH-HHHhh-cc-----
Confidence 65322 12357899999999998899999999999999999999999997443222 11111 11111 00
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT-MKEVTN 587 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~evl~ 587 (597)
........++.+.++|.+||+.+|.+||+ ++++++
T Consensus 226 -----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 -----KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00112245567899999999999999996 688874
No 343
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4e-34 Score=288.99 Aligned_cols=259 Identities=27% Similarity=0.382 Sum_probs=196.7
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCccceeeeEEEeCCc-----
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQI---NHRNIVKLLGCCLETEV----- 387 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 387 (597)
|++.+.||+|+||.||+|.++ +++.+|+|.+.... ......+.+|+.+++++ +|+||+++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999987 48999999886432 22234566788777666 59999999999998776
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.+++|||++ ++|.+++..... ..+++..++.++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999997 489998876432 35899999999999999999999999 9999999999999999999999999987
Q ss_pred cccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch---
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL--- 544 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 544 (597)
....... .....++..|+|||.+.+..++.++||||||+++|+|++|++||......+ ....+.........
T Consensus 156 ~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 156 IYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---QLDKIFDVIGLPSEEEW 230 (287)
T ss_pred eccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---HHHHHHHHcCCCChHhc
Confidence 7543221 122347888999999998899999999999999999999999987543221 11111111100000
Q ss_pred ----------hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 ----------FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ----------~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...................+.+++.+||+.||++||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000011112344567889999999999999999999985
No 344
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.7e-34 Score=293.43 Aligned_cols=244 Identities=26% Similarity=0.397 Sum_probs=194.4
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
|...+.||+|+||+||+|... +++.|++|.+... .......+.+|+.++++++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999975 6889999987642 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+. ++|.+++.... .++++.+++.++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 57888876532 35899999999999999999999999 99999999999999999999999998864321
Q ss_pred eeeecccccccccCccccc---cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 475 HLTTKVQGTFGYVDPEYFQ---SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.....++..|+|||++. ...++.++||||||+++|+|++|..||....... ....... ....
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~-~~~~------ 238 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQ-NDSP------ 238 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHh-cCCC------
Confidence 22345788999999974 4568899999999999999999999986543211 1111111 1110
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.......+..+.+|+.+||+.+|.+||++.+++..
T Consensus 239 --~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 --TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112234568899999999999999999999863
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-34 Score=290.53 Aligned_cols=251 Identities=24% Similarity=0.316 Sum_probs=197.5
Q ss_pred CCccCCcccccCceEEEEEEe----cCCcEEEEEEccccC----hhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 318 NYNANRILGQGGQGTVYKGML----TDGRIVAVKKSKLVD----ETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~----~~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
+|++.+.||+|+||.||++.. .+|+.||+|.+.... ....+.+.+|+.+++++ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999986 368899999876422 22346788999999999 599999999999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++||||+++++|.+++... .++++..+..++.|+++||.|||+.+ ++||||+|+|||+++++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999999764 24889999999999999999999999 99999999999999999999999999976
Q ss_pred ccCCCceeeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhh
Q 038707 469 VMVDQTHLTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 546 (597)
Q Consensus 469 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (597)
.............++..|+|||.+.. ..++.++||||||+++|+|++|+.||....... ..............
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~--- 229 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP--- 229 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhccCC---
Confidence 54332222333458889999999865 347889999999999999999999986432211 11111111111100
Q ss_pred hhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 038707 547 ALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTN 587 (597)
Q Consensus 547 ~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~ 587 (597)
..+......+.+++.+||+.+|++|| ++.++++
T Consensus 230 --------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 --------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred --------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 01223445688999999999999997 6677665
No 346
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=318.62 Aligned_cols=264 Identities=29% Similarity=0.448 Sum_probs=217.8
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEec----C----CcEEEEEEccc-cChhhHHHHHHHHHHHhhcC-CCccceeee
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLT----D----GRIVAVKKSKL-VDETNVEQFINEVVILSQIN-HRNIVKLLG 380 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~----~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 380 (597)
.++...++..+.+.||+|+||.|++|... . ...||||.++. ....+.+.+..|+++|+.+. |+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 44555566677779999999999999843 1 35799998874 44467789999999999995 999999999
Q ss_pred EEEeCCcceEEEeccCCCChhhHHhhcC-------C----C--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCC
Q 038707 381 CCLETEVPLLVYEFIPNGTLYQYIHNQI-------E----E--FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKS 447 (597)
Q Consensus 381 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-------~----~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~ 447 (597)
++.+.+..++|+||+..|+|.++++... . . ..++..+++.++.|||.|++||++.. ++||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999999865 0 0 13899999999999999999999999 99999999
Q ss_pred CCeEeCCCCcEEEeeccccccccCCCceeeecccc--cccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCC
Q 038707 448 ANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQG--TFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAIN 524 (597)
Q Consensus 448 ~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~ 524 (597)
+|||+.++..+||+|||+++..............+ ...|||||.+....|+.|+||||||++||||++ |..||.+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999999776555554333332 456999999999999999999999999999999 999997633
Q ss_pred CcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 038707 525 TDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGI 592 (597)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l 592 (597)
..+ .+.+.+++|.. .+.+..+.+++.++++.||+.+|++||++.++.+.|+.+
T Consensus 527 ~~~------~l~~~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 PTE------ELLEFLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred cHH------HHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 121 12233444332 334556678899999999999999999999999999885
No 347
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=272.70 Aligned_cols=248 Identities=25% Similarity=0.421 Sum_probs=196.1
Q ss_pred cCCcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEeccCC
Q 038707 321 ANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
.+..||.|.-|.|++.... .|...|||.+.. .+.++.++++..+.++..-+ .|.||+.+|+|..+...++.||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 3456999999999999976 589999998764 45666778888888777665 8999999999999999999999983
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
.-++.++++- ..++++..+-++...+++||.||..++. |+|||+||+|||+|+.|++||+|||.+-.+.... ..
T Consensus 175 ~C~ekLlkri--k~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--Ah 248 (391)
T KOG0983|consen 175 TCAEKLLKRI--KGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--AH 248 (391)
T ss_pred HHHHHHHHHh--cCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeecccccceeeccc--cc
Confidence 4566666653 3469999999999999999999998764 9999999999999999999999999997765433 34
Q ss_pred ecccccccccCcccccc---CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 478 TKVQGTFGYVDPEYFQS---SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~---~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
+...|-+.|||||.+.- ..|+.++||||||++|+||.||+.||.+-+.+- . ....+.+. ....++.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF--e----~ltkvln~-ePP~L~~---- 317 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF--E----VLTKVLNE-EPPLLPG---- 317 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH--H----HHHHHHhc-CCCCCCc----
Confidence 45568999999999853 578999999999999999999999998644321 0 11111110 0011111
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
....++.+.+++..||++|+.+||...+++++
T Consensus 318 --~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 318 --HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 12256779999999999999999999998864
No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.2e-34 Score=289.34 Aligned_cols=262 Identities=24% Similarity=0.340 Sum_probs=196.7
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE-TNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
|++.+.||+|++|+||+|... +++.|+||+...... .......+|+..+++++ |+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999986 578999998764322 22334567999999999 999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
+++|.+++.... ...+++..++.++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 889999987653 235899999999999999999999999 99999999999999999999999999976543221
Q ss_pred eeecccccccccCccccc-cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH----------HHHHHHhcCch
Q 038707 476 LTTKVQGTFGYVDPEYFQ-SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG----------YFLQAINENRL 544 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~ 544 (597)
.....++..|+|||.+. ...++.++|+||||+++++|++|+.||......+...... +.........+
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 22345788999999874 4568999999999999999999999986543221100000 00000000000
Q ss_pred hhhhh---HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 FEALD---ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ~~~l~---~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+. ..............+.++|++||+.+|++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000 00001111112467899999999999999999999975
No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-34 Score=291.37 Aligned_cols=248 Identities=29% Similarity=0.410 Sum_probs=202.9
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 391 (597)
++|.+.+.||+|++|.||++... +++.||+|.... ........+.+|+.++++++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46889999999999999999976 689999998753 23344567889999999998 99999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+++++|.+++.+.. .+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998643 4999999999999999999999999 99999999999999999999999999876543
Q ss_pred CCc-------------------eeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH
Q 038707 472 DQT-------------------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 532 (597)
Q Consensus 472 ~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~ 532 (597)
... .......++..|+|||.+....++.++||||||+++++|++|+.||......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------ 228 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------ 228 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH------
Confidence 221 1122334788999999998888999999999999999999999999754311
Q ss_pred HHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCH----HHHHH
Q 038707 533 GYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTM----KEVTN 587 (597)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~----~evl~ 587 (597)
..+.... . .....+...++.+.+|+.+||+.+|++||++ +++++
T Consensus 229 ~~~~~~~-~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 LTFQKIL-K----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHH-h----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1111111 1 0111223335678899999999999999999 66654
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.8e-35 Score=297.44 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=194.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCC------
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETE------ 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 386 (597)
.++|++.+.||+|++|.||+|... +++.+|||++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999976 588999998754322 22346788999999999999999999876544
Q ss_pred --cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 387 --VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 387 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
..++|+||+.. +|...+... ...+++..+..++.|+++||.|||+.+ |+|+||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 35899999964 677777643 235999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCce----------eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH
Q 038707 465 TSRSVMVDQTH----------LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG 533 (597)
Q Consensus 465 l~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~ 533 (597)
++......... ......+++.|+|||.+.+ ..++.++||||||+++|||++|++||........ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~---~~ 237 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ---LH 237 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH---HH
Confidence 99765432211 1123356888999998765 4589999999999999999999999975433211 11
Q ss_pred HHHHHHhcC-----------------chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 534 YFLQAINEN-----------------RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 534 ~~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......... .......+.. ........+.+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTL-EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccH-HHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111100000 0000000000 0011122356889999999999999999999875
No 351
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.7e-35 Score=320.69 Aligned_cols=254 Identities=28% Similarity=0.427 Sum_probs=193.7
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC------
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV-DETNVEQFINEVVILSQINHRNIVKLLGCCLET------ 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 385 (597)
+....|+..++||+||||.||+++++ ||+.+|||++... .......+.+|+..|++|+|||||+++....+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45567888999999999999999987 8999999998764 344556789999999999999999987643210
Q ss_pred --------------------------------------------------------------------------------
Q 038707 386 -------------------------------------------------------------------------------- 385 (597)
Q Consensus 386 -------------------------------------------------------------------------------- 385 (597)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 038707 386 ---------------------------------EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYL 432 (597)
Q Consensus 386 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~L 432 (597)
..+||-||||+..+|.++++++... -.....|+++++|+.||.|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHH
Confidence 0026778999988888888765321 14778899999999999999
Q ss_pred HhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc------C-----------CCceeeecccccccccCccccccC
Q 038707 433 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM------V-----------DQTHLTTKVQGTFGYVDPEYFQSS 495 (597)
Q Consensus 433 H~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~------~-----------~~~~~~~~~~gt~~y~aPE~~~~~ 495 (597)
|+.+ ||||||||.||+||++..|||+|||++.... . ......+...||.-|+|||++.+.
T Consensus 714 H~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9999 9999999999999999999999999998721 0 011123446699999999998764
Q ss_pred ---CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhc
Q 038707 496 ---QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCL 572 (597)
Q Consensus 496 ---~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl 572 (597)
.|+.|+|+||||+||+||+. ||... .| . ......++.+.+... ........+.-+.+|++|+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--ME---R-a~iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTS--ME---R-ASILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCch--HH---H-HHHHHhcccCCCCCC------cccccccchHHHHHHHHHh
Confidence 59999999999999999996 56421 11 1 112333344443322 1112223334468999999
Q ss_pred ccCCCCCCCHHHHHH
Q 038707 573 NLNGKMRPTMKEVTN 587 (597)
Q Consensus 573 ~~~p~~RPt~~evl~ 587 (597)
+.||.+|||+.|+|.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999985
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=299.38 Aligned_cols=261 Identities=26% Similarity=0.359 Sum_probs=196.1
Q ss_pred cCCc-cCCcccccCceEEEEEEec-CCcEEEEEEccccChhh--------------HHHHHHHHHHHhhcCCCccceeee
Q 038707 317 DNYN-ANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETN--------------VEQFINEVVILSQINHRNIVKLLG 380 (597)
Q Consensus 317 ~~y~-~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 380 (597)
++|. +.+.||+|+||+||+|.+. +++.||||......... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4578999999999999976 68999999876432211 124779999999999999999999
Q ss_pred EEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 381 CCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 381 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
++...+..++||||++ ++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence 9999999999999996 6899998753 24899999999999999999999999 999999999999999999999
Q ss_pred eeccccccccCCC-------------ceeeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCc
Q 038707 461 SDFGTSRSVMVDQ-------------THLTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTD 526 (597)
Q Consensus 461 ~Dfgl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~ 526 (597)
+|||++....... ........+++.|+|||.+.+. .++.++||||||+++++|++|+.||...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999987654111 1111223467889999998764 4789999999999999999999999755432
Q ss_pred CCCcHHHHHHHHHhcCchh---hh--------h---hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 527 EDKSLVGYFLQAINENRLF---EA--------L---DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~---~~--------l---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+ ............... +. . .+..........+..+.++|.+||+.+|++||+++|++.
T Consensus 241 ~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 D---QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred H---HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1 111111111100000 00 0 000001111223567889999999999999999999986
No 353
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.3e-34 Score=300.62 Aligned_cols=262 Identities=22% Similarity=0.361 Sum_probs=195.9
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC------
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE------ 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 386 (597)
.++|...+.||+|+||.||+|... +++.||||++... .......+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999975 6899999987532 2233456889999999999999999999987543
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..++|+||+.. +|.+++. ..+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 35899999964 6766542 23899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHH--------
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ-------- 537 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~-------- 537 (597)
+..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .......
T Consensus 165 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~ 237 (342)
T cd07879 165 RHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPE 237 (342)
T ss_pred cCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHH
Confidence 764321 223457888999999866 568999999999999999999999997543211 0000000
Q ss_pred ---HHhcCchhhhhhH--Hh-hh---hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhhh
Q 038707 538 ---AINENRLFEALDA--RV-LK---EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE--LGGIR 593 (597)
Q Consensus 538 ---~~~~~~~~~~l~~--~~-~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~--L~~l~ 593 (597)
............. .. .. .........+.+||.+||+.||++||++++++.. ++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000000000000 00 00 0001234568899999999999999999999954 65554
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.2e-34 Score=287.28 Aligned_cols=242 Identities=23% Similarity=0.303 Sum_probs=187.5
Q ss_pred cccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHH---HHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 324 ILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVV---ILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
+||+|+||.||++... +++.||+|.+.... ......+.+|.. .++...||||+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999975 58899999865321 111222344433 4445579999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++... ..+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 99999998753 35999999999999999999999999 9999999999999999999999999987543221
Q ss_pred eecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
.....|+..|+|||.+.+. .++.++||||||+++|+|++|+.||.......... ........ ...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~----------~~~ 217 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTLTM----------AVE 217 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhhcc----------CCC
Confidence 1234589999999998754 68999999999999999999999997643222111 11111000 011
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRP-----TMKEVTNE 588 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RP-----t~~evl~~ 588 (597)
.+...+..+.+++.+||..+|.+|| ++.++++.
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 1222356788999999999999999 99999863
No 355
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=275.62 Aligned_cols=253 Identities=23% Similarity=0.277 Sum_probs=203.6
Q ss_pred HhcCCccC-CcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe----CCc
Q 038707 315 ATDNYNAN-RILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLE----TEV 387 (597)
Q Consensus 315 ~~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 387 (597)
++++|.+. ++||-|-.|.|-....+ +++.+|+|.+.. ..+.++|+++.-.. .|||||.+++++.. ..-
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45566654 58999999999998875 689999998763 35667899988777 59999999999864 346
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC---CCcEEEeecc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD---KYRAKVSDFG 464 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg 464 (597)
+.+|||.|+||.|++.+.++. ...+++.++..|++||..|+.|||+.+ |.||||||+|+|... |-.+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence 789999999999999998864 346999999999999999999999999 999999999999964 4569999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL 544 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (597)
+|+.... .......+-|+.|.|||++....|+...|+||+||++|-||+|.+||....... ..--....++.+.+
T Consensus 210 FAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---ispgMk~rI~~gqy 284 (400)
T KOG0604|consen 210 FAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKRRIRTGQY 284 (400)
T ss_pred cccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---CChhHHhHhhccCc
Confidence 9987543 233455678999999999999999999999999999999999999997654321 11123334444433
Q ss_pred hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. +- .......++...++|+.+|+.+|.+|.|+.++++
T Consensus 285 ~-FP-----~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 285 E-FP-----EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c-CC-----ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 11 1223556778999999999999999999999875
No 356
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=274.06 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=203.1
Q ss_pred CcccccCceEEEEEE-ecCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 323 RILGQGGQGTVYKGM-LTDGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~-~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
+.||+|+|+.|-..+ +.+|..+|||++.....-...+..+|++++.+.+ |+||++|+++|++++..|||||.|.+|+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 589999999999887 5689999999988776677889999999999995 99999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc---EEEeeccccccccC--C---
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGTSRSVMV--D--- 472 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfgl~~~~~~--~--- 472 (597)
..+|+++. .+++.++.++.+.|+.||.|||.++ |.||||||+|||-.+... +||+||.+..-... +
T Consensus 164 LshI~~~~---~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQKRK---HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 99998754 4999999999999999999999999 999999999999976544 79999988754321 1
Q ss_pred -CceeeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC-----C---CcHHHHHHHH
Q 038707 473 -QTHLTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE-----D---KSLVGYFLQA 538 (597)
Q Consensus 473 -~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~-----~---~~~~~~~~~~ 538 (597)
.++......|+..|||||+.. ...|+.+.|.||||||||-||+|.+||.+.-..+ . ..-.......
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence 122233456888999999863 3468999999999999999999999998754321 1 1122233444
Q ss_pred HhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 539 INENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.+|.+. +.| .-....+.+..+||...|..++.+|.++.+++.
T Consensus 318 IQEGkYe-FPd-----kdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 318 IQEGKYE-FPD-----KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HhccCCc-CCh-----hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 4444431 111 112445667889999999999999999988876
No 357
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.1e-34 Score=289.01 Aligned_cols=259 Identities=27% Similarity=0.384 Sum_probs=200.2
Q ss_pred CccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 319 YNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
|+..+.||+|++|.||+|... +++.+|+|...... ....+.+.+|+.++++++|+||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999976 58999999877543 334567889999999999999999999999999999999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
+ ++|.+++.+.. ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 59999998753 34999999999999999999999999 99999999999999999999999999876543222
Q ss_pred eeecccccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc-------------
Q 038707 476 LTTKVQGTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE------------- 541 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 541 (597)
......++..|+|||.+.+. .++.++||||||++++||++|+.||......+. ..........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhcccc
Confidence 22233457789999998766 789999999999999999999999965432211 1111110000
Q ss_pred --CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 --NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 --~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+..............+..+.+++.+||+.+|++||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000001111223567999999999999999999999986
No 358
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.7e-34 Score=298.50 Aligned_cols=266 Identities=22% Similarity=0.337 Sum_probs=199.8
Q ss_pred CHHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEe
Q 038707 308 TSKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLE 384 (597)
Q Consensus 308 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 384 (597)
...++..++++|.+.+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34566777899999999999999999999864 6899999987642 23345678899999999999999999998864
Q ss_pred C------CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 385 T------EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 385 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence 3 3357788876 78998887643 3899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 537 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 537 (597)
||+|||++...... .....++..|+|||.+.+ ..++.++||||||+++++|++|+.||....... .......
T Consensus 160 kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~---~~~~~~~ 232 (345)
T cd07877 160 KILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILR 232 (345)
T ss_pred EEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence 99999998754321 223457889999999866 568899999999999999999999996533211 1111100
Q ss_pred HHhc--CchhhhhhH----Hhh-----------hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 538 AINE--NRLFEALDA----RVL-----------KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 538 ~~~~--~~~~~~l~~----~~~-----------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.... ..+...+.. ... .......+..+.+||.+||+.+|.+||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 000000000 000 00001124568899999999999999999998863
No 359
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.9e-34 Score=291.87 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=194.8
Q ss_pred hcCCccCCcccccCceEEEEEEecC-CcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVD-ETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 392 (597)
.++|++.+.||+|++|.||+|.+.+ ++.||||.++... .....++..|+.++.+.. ||||+++++++.+....+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568889999999999999999874 8999999976432 334556777887777775 999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
||++ ++|.+++.... .++++..+..++.|++.||+|||+ .+ |+||||+|+||++++++.+||+|||++.....
T Consensus 94 e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9985 47777766532 258999999999999999999997 47 99999999999999999999999999876533
Q ss_pred CCceeeecccccccccCccccccCC----CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQ----FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ............ ..
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~-~~- 238 (296)
T cd06618 168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEEP-PS- 238 (296)
T ss_pred CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCCC-CC-
Confidence 222 22334778999999987543 789999999999999999999998642211 111111111110 00
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.......+.++.+|+.+||+.+|.+||++.++++.
T Consensus 239 ------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 ------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011235568999999999999999999999765
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-34 Score=301.13 Aligned_cols=261 Identities=25% Similarity=0.367 Sum_probs=195.8
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC---------
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLET--------- 385 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 385 (597)
..+|.+.+.||+|+||.||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999975 5899999998776666677899999999999999999999876654
Q ss_pred -----CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC-CCCcEE
Q 038707 386 -----EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD-DKYRAK 459 (597)
Q Consensus 386 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~k 459 (597)
...++||||++ ++|.+++... .+++..+..++.||++||.|||+.+ |+||||||+||+++ +++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence 34689999997 5898888643 4899999999999999999999999 99999999999997 456789
Q ss_pred EeeccccccccCCCce--eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 460 VSDFGTSRSVMVDQTH--LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 460 l~Dfgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
|+|||++......... ......++..|+|||.+.. ..++.++||||||+++|+|++|+.||......+... ...
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~---~~~ 232 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ---LIL 232 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHH
Confidence 9999998765322111 1122347889999998654 568899999999999999999999997543221100 000
Q ss_pred HHHhc------CchhhhhhHHhh----------hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 537 QAINE------NRLFEALDARVL----------KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 537 ~~~~~------~~~~~~l~~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..... ......+..... .........++.+|+.+||+.||.+|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 000000000000 0011123456889999999999999999999984
No 361
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.9e-34 Score=285.94 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=195.7
Q ss_pred CCccCCcccccCceEEEEEEecC-CcEEEEEEccc-----cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKL-----VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
+|.+.+.||+|+||.||++.... +..+++|..+. .......++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999998753 44455554332 1233445677899999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 392 YEFIPNGTLYQYIHNQI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|||+++++|.+++.... ....+++..++.++.|+++||.|||+.+ ++|+||+|+||++++ +.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999987532 2346999999999999999999999999 999999999999976 469999999987654
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhH
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDA 550 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (597)
... .......+++.|+|||.+.+..++.++|+||||+++++|++|..||.... ........ ..+.
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~-~~~~------- 221 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRI-VEGP------- 221 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHH-HcCC-------
Confidence 322 22333457889999999988888999999999999999999999985321 11111111 1111
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 551 RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 551 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+...+.++.++|.+||+.+|++||++.++++
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 --TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11122345567899999999999999999999986
No 362
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.5e-33 Score=292.59 Aligned_cols=262 Identities=23% Similarity=0.347 Sum_probs=197.9
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC--
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETE-- 386 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 386 (597)
+....++|++.+.||+|++|.||++... +++.||||+.... .......+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 4445778999999999999999999965 6899999987532 2334567889999999999999999999987654
Q ss_pred ----cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEee
Q 038707 387 ----VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 462 (597)
Q Consensus 387 ----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~D 462 (597)
..++||||+ +++|.+++... .+++..+..++.||++||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence 348999999 77998888642 4899999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHH-------
Q 038707 463 FGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY------- 534 (597)
Q Consensus 463 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~------- 534 (597)
||++...... .....+++.|+|||.+.+ ..++.++|+||||+++++|++|+.||........ ....
T Consensus 162 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~ 235 (343)
T cd07880 162 FGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMKVTGTP 235 (343)
T ss_pred cccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCC
Confidence 9999765322 223457889999999876 4588999999999999999999999975432110 0000
Q ss_pred ---HHHHHhcCchhhhhh------HHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 535 ---FLQAINENRLFEALD------ARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 535 ---~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+...+........+. +.............+.++|.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000000000 00000111223456889999999999999999999983
No 363
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=281.56 Aligned_cols=268 Identities=24% Similarity=0.374 Sum_probs=221.9
Q ss_pred HHHHHhcCCccCCcccccCceEEEEEEecC------CcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEE
Q 038707 311 DLEKATDNYNANRILGQGGQGTVYKGMLTD------GRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCL 383 (597)
Q Consensus 311 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 383 (597)
++.....+++...++-+|.||.||.|.+.+ .+.|.+|.++. .++.+...++.|...+..+.|||+.++.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 344445678888899999999999997643 35677787653 56667888999999999999999999999886
Q ss_pred e-CCcceEEEeccCCCChhhHHhhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 384 E-TEVPLLVYEFIPNGTLYQYIHNQ-----IEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 384 ~-~~~~~lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
+ .+.++++|.++.-|+|..||... .....++-.+...++.|++.|++|||+++ |+|.||..+|.+||+..+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhhee
Confidence 5 56889999999999999999842 22345788889999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCCCce-eeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHH
Q 038707 458 AKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 458 ~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~ 535 (597)
+||+|=.+++.+...+.+ ..........||+||.+.+..|+.++|||||||+||||+| |+.|+...++.| .
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m 507 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------M 507 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------H
Confidence 999999999977644433 3333345678999999999999999999999999999999 999998766655 2
Q ss_pred HHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhhcC
Q 038707 536 LQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTSIG 597 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~~~ 597 (597)
...+++| +....+..++.+|..++.-||+..|++||+++|+..-|.+...+++
T Consensus 508 ~~ylkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 508 EHYLKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred HHHHhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 2223332 3333467788899999999999999999999999999998887764
No 364
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=277.16 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=204.4
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (597)
.++|..+++||+|.||+|-+.+-+ +++.+|||+++. ..+.+...-+.|-++|+..+||.+..|--.|+..+.+++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467889999999999999999976 699999998764 4455667778899999999999999999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||..+|.|.-+|.+.. .++++...-+-.+|+.||.|||+.+ |+.||||.+|.|+|.+|++||+|||+.+....
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999999997643 3888888999999999999999999 99999999999999999999999999987543
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
. ...+...+|||.|+|||++....|..+.|.|.+||+||||++|+.||...+.+. +++++--.
T Consensus 321 ~-g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k----------------LFeLIl~e 383 (516)
T KOG0690|consen 321 Y-GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK----------------LFELILME 383 (516)
T ss_pred c-cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH----------------HHHHHHhh
Confidence 3 334667889999999999999999999999999999999999999997644322 22222111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCC
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRP 580 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RP 580 (597)
- ...+....++...|+...|.+||.+|.
T Consensus 384 d-~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 384 D-LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred h-ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1 123455566788999999999999995
No 365
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-35 Score=303.69 Aligned_cols=268 Identities=26% Similarity=0.409 Sum_probs=201.5
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC------Ccce
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQINHRNIVKLLGCCLET------EVPL 389 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 389 (597)
.+...+.||+||||.||+|+++ +|+.||||.... ......+...+|+++|++++|+|||++++.-.+. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3555678999999999999965 799999998764 3445677889999999999999999999986654 4678
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC--C--CCcEEEeeccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD--D--KYRAKVSDFGT 465 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~--~--~~~~kl~Dfgl 465 (597)
+||||+.+|+|...|.+-....-|++.+++.++..+..||.|||+++ |+||||||.||++- + ....||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999987555556999999999999999999999999 99999999999993 3 33479999999
Q ss_pred cccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc---
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE--- 541 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 541 (597)
|+.+..+. ......||..|++||++.. ..|+...|.|||||++|++.||..||....... +........+..
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk--~~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK--NNKEIMWHIITKKPS 246 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc--ccchhhhhhhccCCC
Confidence 99875443 6777889999999999985 889999999999999999999999996543221 111111111111
Q ss_pred -----------CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHhhh
Q 038707 542 -----------NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRP--TMKEVTNELGGI 592 (597)
Q Consensus 542 -----------~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP--t~~evl~~L~~l 592 (597)
+++.....-...-.........+-..+..+|..+|.+|- ...+....+..|
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 111000000001112233334455667777888888887 555555555544
No 366
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-35 Score=319.30 Aligned_cols=258 Identities=25% Similarity=0.355 Sum_probs=214.8
Q ss_pred HHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC
Q 038707 310 KDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLET 385 (597)
Q Consensus 310 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 385 (597)
.++....+.|.++++||+|+||.|..++.+ +++.+|+|++.. ....+..-|..|-.+|..-+.+.|++|+-.|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344444577999999999999999999976 588999998765 4566778899999999999999999999999999
Q ss_pred CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
..+|+||||++||+|..++.+.. +++++.+.-++.+|..||.-||+.| +|||||||+|||||..|++||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999998764 4999999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 466 SRSVMVDQTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 466 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
+-.+..+..-.....+|||.|++||++.. +.|+...|.||+||++|||+.|..||.... +..-+...++
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveTY~KIm~ 295 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVETYGKIMN 295 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHHHHHHhc
Confidence 98887666667777889999999999853 568999999999999999999999998533 3333333333
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT---MKEVTN 587 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt---~~evl~ 587 (597)
....+.+.+ ..+.+++..+||.+.+ -+|+.|.. ++++-.
T Consensus 296 hk~~l~FP~-------~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 296 HKESLSFPD-------ETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred hhhhcCCCc-------ccccCHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence 322221111 1336677889999988 67888877 666543
No 367
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=288.49 Aligned_cols=244 Identities=27% Similarity=0.346 Sum_probs=203.1
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
+.|...++||+||||.||-.+.. +|+.+|.|++.. .......-.++|-.+|.+++.+.||.+--.|+..+.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 55788899999999999999865 699999987542 12223345678999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
..|.||+|.-+|.+... .-+++..++-++.+|+-||++||+.. |+.||+||+|||||+.|+++|+|+|||..+...
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999987653 34999999999999999999999999 999999999999999999999999999887644
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
.. .....||.+|||||++++..|+...|.|||||+||||+.|+.||........ .+-+|.++
T Consensus 341 ~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk----------------~eEvdrr~ 402 (591)
T KOG0986|consen 341 KP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK----------------REEVDRRT 402 (591)
T ss_pred Cc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh----------------HHHHHHHH
Confidence 33 3444799999999999999999999999999999999999999975432221 22233333
Q ss_pred hh---hhhHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 553 LK---EAKKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 553 ~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
.. +.+...+++..+|.+..|+.||++|..-
T Consensus 403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 22 2335556778899999999999999754
No 368
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8e-35 Score=275.52 Aligned_cols=271 Identities=21% Similarity=0.327 Sum_probs=203.0
Q ss_pred HHhcCCccCCcccccCceEEEEEEecC-----CcEEEEEEccccChh--hHHHHHHHHHHHhhcCCCccceeeeEEEe-C
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLTD-----GRIVAVKKSKLVDET--NVEQFINEVVILSQINHRNIVKLLGCCLE-T 385 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 385 (597)
.....|+....||+|.||.||+|..++ .+.+|||+++..... -.....+|+.+++.++||||+.|..++.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 345679999999999999999997432 237899988754322 23567899999999999999999999988 6
Q ss_pred CcceEEEeccCCCChhhHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC----CcEE
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQI--EEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK----YRAK 459 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~----~~~k 459 (597)
...+|++||.+. +|.+.|+-+. ....++...+..|+.||+.|+.|||+.= |+||||||.|||+..+ |.||
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeE
Confidence 688999999966 8988887532 3356999999999999999999999999 9999999999999877 8999
Q ss_pred EeeccccccccCCCcee--eecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH----
Q 038707 460 VSDFGTSRSVMVDQTHL--TTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV---- 532 (597)
Q Consensus 460 l~Dfgl~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~---- 532 (597)
|+|||+++.+...-... ...+.-|..|.|||++.+ ..||.+.|||+.|||+.||++-++-|.+...+-.....
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 99999999887654443 345667999999999877 57999999999999999999999888775443222110
Q ss_pred --HHHHHHHh---cCch--------h-hhhh-HH--hhhh--------hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 533 --GYFLQAIN---ENRL--------F-EALD-AR--VLKE--------AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 533 --~~~~~~~~---~~~~--------~-~~l~-~~--~~~~--------~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..+...+. +..+ . ..+. .+ .... .....++...+|+.++|..||-+|.|+++.++
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 01111110 0000 0 0000 00 0000 00111233678999999999999999999987
Q ss_pred H
Q 038707 588 E 588 (597)
Q Consensus 588 ~ 588 (597)
.
T Consensus 337 h 337 (438)
T KOG0666|consen 337 H 337 (438)
T ss_pred c
Confidence 5
No 369
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.9e-34 Score=295.17 Aligned_cols=262 Identities=21% Similarity=0.319 Sum_probs=199.0
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEe-CCc
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLE-TEV 387 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 387 (597)
+..++++|++.+.||+|+||.||++... +++.||+|++.. ......+.+.+|+.++++++||||+++++++.. .+.
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456788999999999999999999966 689999998653 223345678899999999999999999999876 557
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.++++||+ +++|.++++.. ++++..+..++.|+++||.|||+.+ |+|+||+|+|||+++++.+||+|||++.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 88999998 56898888643 3788889999999999999999999 9999999999999999999999999987
Q ss_pred cccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh------
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN------ 540 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------ 540 (597)
..... .....++..|+|||.+.+ ..++.++||||||+++++|++|+.||....... ..........
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~ 229 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN---QFSIITDLLGTPPDDV 229 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence 54221 123456888999998765 578999999999999999999999996543211 0000000000
Q ss_pred -----cCchhhhhhHHh------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 541 -----ENRLFEALDARV------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 541 -----~~~~~~~l~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.....+.+.... ..+.....++.+.++|.+||+.+|++||++.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 230 INTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 000011234678999999999999999999999764
No 370
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=325.71 Aligned_cols=255 Identities=25% Similarity=0.387 Sum_probs=204.2
Q ss_pred HHHhcCCccCCcccccCceEEEEEEe-cCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 313 EKATDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 313 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
...+-+++-...||.|.||.||-+.. .+|+..|+|.++.. .........+|..++..++|||+|+++|+-.+.+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 34456788888999999999999995 46999999976643 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
|.|||+++|+|.+.+..... .++.....+..|++.|+.|||++| ||||||||.||||+.+|.+|++|||.|..+
T Consensus 1311 IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999976432 566667778899999999999999 999999999999999999999999999887
Q ss_pred cCCCce---eeecccccccccCccccccC---CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 470 MVDQTH---LTTKVQGTFGYVDPEYFQSS---QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 470 ~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
...... ......||+.|||||++.+. ...-++|||||||+++||+||+.||...+.+= .+++. +.-|.
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~---V~~gh 1458 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYH---VAAGH 1458 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhH---HhccC
Confidence 654211 12345699999999998653 45679999999999999999999997543211 11111 11111
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
. ...+...+.+-.+++.+||+.||++|-++.|+++.
T Consensus 1459 ~---------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 K---------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred C---------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1 12233456667899999999999999999888764
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.3e-34 Score=298.93 Aligned_cols=259 Identities=23% Similarity=0.348 Sum_probs=198.0
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc---
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEV--- 387 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 387 (597)
...++|++.+.||+|++|.||+|... +++.||+|++... .......+.+|+.++++++||||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678999999999999999999986 5889999987642 23345678889999999999999999998876554
Q ss_pred ---ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 388 ---PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 388 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
.++|+||+ +++|.+++... .+++..++.++.|+++||.|||+.+ |+|+||||+||++++++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 79999998 66999988752 4899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh---
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN--- 540 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--- 540 (597)
++...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+ ..........
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~---~~~~i~~~~~~~~ 236 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID---QLKRIMNLVGTPD 236 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCC
Confidence 99765332 233457888999999865 467899999999999999999999996543211 0110001000
Q ss_pred --------cCchhhhhhHHh------hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 --------ENRLFEALDARV------LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 --------~~~~~~~l~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.......+.... ........++.+.+++.+||+.+|++|||+.+|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000000 00001123567899999999999999999999975
No 372
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=283.13 Aligned_cols=241 Identities=27% Similarity=0.396 Sum_probs=200.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 391 (597)
..|..+.+||+|+||+|.+|..+ +.+.+|||+++. ....+.+--+.|-++|+... -|.+++++.+|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 45899999999999999999976 467899998764 23445566677888888774 68899999999999999999
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
|||+.+|+|--++++..+ +.+..+.-+|.+||-||-+||+++ |+.||||.+|||||.+|++||+|||+++.-..
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999999987543 778889999999999999999999 99999999999999999999999999987554
Q ss_pred CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
+. ..+....|||.|+|||++...+|+..+|.|||||+|||||.|++||++.+.++ ..+.+.+..
T Consensus 503 ~~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-------lF~aI~ehn-------- 566 (683)
T KOG0696|consen 503 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-------LFQAIMEHN-------- 566 (683)
T ss_pred CC-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-------HHHHHHHcc--------
Confidence 33 33556789999999999999999999999999999999999999998765544 222222211
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCC
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPT 581 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt 581 (597)
...+...+.+...+.+..|...|.+|..
T Consensus 567 --vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 567 --VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred --CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 1224455666788999999999999953
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9.7e-34 Score=292.88 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=192.2
Q ss_pred CCccCCcccccCceEEEEEEec-C--CcEEEEEEcccc--ChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeC----Cc
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-D--GRIVAVKKSKLV--DETNVEQFINEVVILSQI-NHRNIVKLLGCCLET----EV 387 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~--~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 387 (597)
+|++.+.||+|+||.||++... . +..+|+|++... .....+.+.+|+.+++++ +||||+++++..... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999975 3 778999987642 223356788999999999 599999999875432 35
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.++++||+. ++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678889885 6899988653 34899999999999999999999999 9999999999999999999999999997
Q ss_pred cccCCCce---eeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh---
Q 038707 468 SVMVDQTH---LTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN--- 540 (597)
Q Consensus 468 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--- 540 (597)
........ ......|+..|+|||.+.+ ..++.++||||||+++++|++|+.||....... ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~ 230 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQVLGTPD 230 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHHHhCCCC
Confidence 65432211 1223468899999998765 568999999999999999999999987543211 1110110000
Q ss_pred --------cCchhhhhh---H---HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 --------ENRLFEALD---A---RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 --------~~~~~~~l~---~---~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
......... . .............+.+|+.+||+.||.+|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0 0000001112457889999999999999999999874
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.7e-33 Score=277.01 Aligned_cols=236 Identities=31% Similarity=0.371 Sum_probs=193.3
Q ss_pred ccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCCh
Q 038707 325 LGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 400 (597)
||+|++|.||++... +++.+++|.+.... ......+.+|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999976 58999999866422 23566889999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecc
Q 038707 401 YQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKV 480 (597)
Q Consensus 401 ~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 480 (597)
.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 153 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTF 153 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCC
Confidence 99997643 4899999999999999999999998 9999999999999999999999999987654322 123344
Q ss_pred cccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 481 QGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 481 ~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
.++..|++||.+.+...+.++|+||||+++|+|++|+.||......+ ....+.... ...+...
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~----------~~~~~~~ 216 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-------IYEKILKDP----------LRFPEFL 216 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHhcCC----------CCCCCCC
Confidence 57889999999988889999999999999999999999996433211 111111111 1112223
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRPTMKE 584 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt~~e 584 (597)
+..+.+++.+||..||++||++.+
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCccc
Confidence 567889999999999999999954
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=282.04 Aligned_cols=258 Identities=30% Similarity=0.427 Sum_probs=201.3
Q ss_pred HhcCCccCCcccccCceEEEEEEe-cCCcEEEEEEccccC-------hhhHHHHHHHHHHHhhcCCCccceeeeEEE-eC
Q 038707 315 ATDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLVD-------ETNVEQFINEVVILSQINHRNIVKLLGCCL-ET 385 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~ 385 (597)
..++|-++.+||+|||++||++.+ ...+.||+|+..... +...+...+|..|.+.|.||.||++++++. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 346788889999999999999995 468899999865421 112345678999999999999999999986 66
Q ss_pred CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC---CCCcEEEee
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD---DKYRAKVSD 462 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~---~~~~~kl~D 462 (597)
+.++-|+||+++.+|+-||+.+. .++++++..|+.||+.||.||.... +||+|-||||.||||- .-|.+||+|
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeee
Confidence 78889999999999999998764 3999999999999999999999876 6799999999999994 347899999
Q ss_pred ccccccccCCCc------eeeecccccccccCcccccc----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHH
Q 038707 463 FGTSRSVMVDQT------HLTTKVQGTFGYVDPEYFQS----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 532 (597)
Q Consensus 463 fgl~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~ 532 (597)
|||++.+..+.. .......||..|++||.+.- ...+.|.||||+|||+|+.+.|++||.......+
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd---- 692 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD---- 692 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH----
Confidence 999998764322 23445669999999998743 3578899999999999999999999976443321
Q ss_pred HHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 533 GYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.++.+...- ++.....+....+...+|++||++.-++|.+..++..
T Consensus 693 -----ILqeNTIlkAt--EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 693 -----ILQENTILKAT--EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -----HHhhhchhcce--eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11122221111 1111223444566789999999999999998887753
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=247.72 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=199.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDE--TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+|...++||+|.||+||+|+.. +++.||+|++...+. .......+|+-+|+.++|+|||++++....+..+-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4666788999999999999965 589999999876433 3456789999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+. -+|..|..... ..++.+....++.|+++||.++|+++ +.|||+||.|.||+.+|.+||+|||+++.+..+..
T Consensus 83 cd-qdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hh-HHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 94 58888887643 34899999999999999999999999 99999999999999999999999999987754432
Q ss_pred eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHH--HhcCchhh---h
Q 038707 475 HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQA--INENRLFE---A 547 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~ 547 (597)
......-|..|.+|.++.+ .-|+...|+||-|||+.|+.. |++.|.+.+.++ ++...|+.. ..+..+.. +
T Consensus 157 -cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd--qlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred -eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH--HHHHHHHHhCCCccccCCccccC
Confidence 2344457899999999877 458999999999999999998 666666544333 222222211 11221111 1
Q ss_pred hhHHhh---------hhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 LDARVL---------KEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 l~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.|-... ....+.....=.+|+++.|.-+|.+|.++++.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 110000 0011111222368899999999999999998875
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.7e-32 Score=307.07 Aligned_cols=145 Identities=28% Similarity=0.377 Sum_probs=131.6
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
++|.+.+.||+|+||+||+|.+. +++.||||++... .......+..|+.+++.++||||+++++.+...+..+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57899999999999999999976 6899999987642 3344577899999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
||+++++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997542 4889999999999999999999998 9999999999999999999999999875
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=267.47 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=198.8
Q ss_pred ccccCHHHHHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCccceeee
Q 038707 304 TKLFTSKDLEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD-ETNVEQFINEVVILSQI-NHRNIVKLLG 380 (597)
Q Consensus 304 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~ 380 (597)
...|+.++++. +..||.|+||+|+|-.++ .|+..|||++.... +.+..+++.|.+...+- +.||||+++|
T Consensus 58 ~~~F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 58 LHTFTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred ccccccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 33455555544 346999999999998876 69999999988644 46677888888866555 6899999999
Q ss_pred EEEeCCcceEEEeccCCCChhhHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcE
Q 038707 381 CCLETEVPLLVYEFIPNGTLYQYIHN--QIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRA 458 (597)
Q Consensus 381 ~~~~~~~~~lv~e~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 458 (597)
....++..|+.||.| ..+|+.+.+. ..++..+++..+-.|......||.||...-. |+|||+||+||||+..|.+
T Consensus 131 a~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~v 207 (361)
T KOG1006|consen 131 ALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDV 207 (361)
T ss_pred hhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCE
Confidence 999999999999999 4577665543 1123458999999999999999999988653 9999999999999999999
Q ss_pred EEeeccccccccCCCceeeecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 459 KVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 459 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
||+|||.+-.+... ...+...|-..|||||.+.. ..|+.+|||||||++|+|+.||+.|+...+. ..+...
T Consensus 208 KLCDFGIcGqLv~S--iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~ 280 (361)
T KOG1006|consen 208 KLCDFGICGQLVDS--IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLC 280 (361)
T ss_pred eeecccchHhHHHH--HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHH
Confidence 99999998665422 22344457888999999854 4589999999999999999999999975432 222222
Q ss_pred HHHhcCchhhhhhHHhh-h-hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 537 QAINENRLFEALDARVL-K-EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~-~-~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+.... |+..+ . ....+....+..+|.-||.+|-++||...++++
T Consensus 281 ~Vv~g-------dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 281 QVVIG-------DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHcC-------CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 22211 11111 1 112345667899999999999999999998865
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=282.17 Aligned_cols=244 Identities=26% Similarity=0.362 Sum_probs=196.9
Q ss_pred CCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCC
Q 038707 322 NRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
.++||.|.||+||-|+.+ +|+.||||.+.. .......++++|+.||+++.||.||.|.-.|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 478999999999999975 799999997653 33445578999999999999999999999999999999999999 56
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC---CcEEEeeccccccccCCCce
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK---YRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~---~~~kl~Dfgl~~~~~~~~~~ 475 (597)
+..+.|-... +..|++..-.-++.||+.||.|||.++ |+|.||||+|||+.+. -++||+|||+++.+. +..
T Consensus 648 DMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg--Eks 721 (888)
T KOG4236|consen 648 DMLEMILSSE-KGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIG--EKS 721 (888)
T ss_pred hHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecc--hhh
Confidence 6666665432 334899988999999999999999999 9999999999999654 479999999999874 344
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhh
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKE 555 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (597)
......||+.|+|||++.+..|...-|+||.|||+|.-|+|..||.....-. ..+.+... + +...
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn---------dQIQNAaF---M---yPp~ 786 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN---------DQIQNAAF---M---YPPN 786 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh---------HHhhcccc---c---cCCC
Confidence 4566789999999999999999999999999999999999999996432111 11111111 1 1122
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 556 AKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 556 ~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
...+......+||...|+..-.+|-+...-+.
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 33556667889999999999999988876543
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.8e-32 Score=269.37 Aligned_cols=220 Identities=24% Similarity=0.227 Sum_probs=177.0
Q ss_pred cCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhhHHhh
Q 038707 328 GGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHN 406 (597)
Q Consensus 328 G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 406 (597)
|.+|.||++.+. +++.+|+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999976 68999999886432 233455556666799999999999999999999999999999999976
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccc
Q 038707 407 QIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGY 486 (597)
Q Consensus 407 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y 486 (597)
.. .+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.++|+|||.+...... .....++..|
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y 148 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMY 148 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccc
Confidence 43 4899999999999999999999999 999999999999999999999999987654321 1223456789
Q ss_pred cCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHH
Q 038707 487 VDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVAT 566 (597)
Q Consensus 487 ~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 566 (597)
+|||.+....++.++||||+|+++|||++|+.|+........ ... ....+...+..+.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~~ 207 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN------------THT---------TLNIPEWVSEEARS 207 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc------------ccc---------ccCCcccCCHHHHH
Confidence 999999888899999999999999999999988753211100 000 00112234456889
Q ss_pred HHHHhcccCCCCCCCHH
Q 038707 567 LAKRCLNLNGKMRPTMK 583 (597)
Q Consensus 567 li~~cl~~~p~~RPt~~ 583 (597)
++.+||+.||++||++.
T Consensus 208 li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 208 LLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHccCCHHHhcCCC
Confidence 99999999999999973
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-33 Score=286.06 Aligned_cols=239 Identities=25% Similarity=0.299 Sum_probs=195.0
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++.|.+...+|.|+|+.|-.+... +++..++|++... ..+-.+|+.++... +||||+++.+.+.+....++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 567888889999999999998865 5788899987643 12234566565555 69999999999999999999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe-CCCCcEEEeeccccccccCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL-DDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll-~~~~~~kl~Dfgl~~~~~~~ 472 (597)
.+.++-|.+.+.... ....++..|+.+|+.|+.|||+++ ++||||||+|||+ ++.++++|+|||.++....+
T Consensus 397 ~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999998888877543 223788889999999999999999 9999999999999 68899999999999876544
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
....+-|..|.|||++....|++++|+||||++||+||+|+.||.....+ ......+..+..
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~-------- 531 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKF-------- 531 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCcc--------
Confidence 22334678899999999999999999999999999999999999765444 112233333222
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
....+....+|+.+||+.||.+||+|.++..
T Consensus 532 ----s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 532 ----SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 2445667889999999999999999999864
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=6.3e-32 Score=295.23 Aligned_cols=260 Identities=20% Similarity=0.274 Sum_probs=171.7
Q ss_pred HhcCCccCCcccccCceEEEEEEec-C----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeE------EE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-D----GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGC------CL 383 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~----~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 383 (597)
..++|++.+.||+|+||.||+|.+. + +..||||++..... .+...+| .+....+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999975 4 68999998764222 1222222 1222223333322222 23
Q ss_pred eCCcceEEEeccCCCChhhHHhhcCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCC
Q 038707 384 ETEVPLLVYEFIPNGTLYQYIHNQIEE-----------------FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIK 446 (597)
Q Consensus 384 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik 446 (597)
+....+|||||+++++|.+++...... .......+..++.||+.||.|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 556789999999999999999754211 01123456789999999999999999 9999999
Q ss_pred CCCeEeCC-CCcEEEeeccccccccCCCceeeecccccccccCccccccC----------------------CCCcccce
Q 038707 447 SANILLDD-KYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSS----------------------QFTEKSDV 503 (597)
Q Consensus 447 ~~NIll~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sDv 503 (597)
|+|||+++ ++.+||+|||+++..............+++.|||||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 57999999999986654433444456789999999965322 23456799
Q ss_pred eehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc----hhhhhhHHhhhh------hhHHHHHHHHHHHHHhcc
Q 038707 504 YSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR----LFEALDARVLKE------AKKEEIMTVATLAKRCLN 573 (597)
Q Consensus 504 ~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~------~~~~~~~~l~~li~~cl~ 573 (597)
|||||+||||+++..|+.. .+..........+. +...+.+....+ ..........+||.+||+
T Consensus 363 wSlGviL~el~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDS-------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred HHHHHHHHHHHhCcCCCch-------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 9999999999997665321 11111111111110 001111110000 000112234589999999
Q ss_pred cCCCCCCCHHHHHHH
Q 038707 574 LNGKMRPTMKEVTNE 588 (597)
Q Consensus 574 ~~p~~RPt~~evl~~ 588 (597)
.||++|||++++++.
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999874
No 383
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=2.7e-34 Score=264.49 Aligned_cols=266 Identities=23% Similarity=0.379 Sum_probs=198.8
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEe--------C
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLE--------T 385 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 385 (597)
..|+...+||+|.||+||+|... +|+.||+|+....+ +.-....++|+.+|..|+|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34555678999999999999965 57889998755432 2334567899999999999999999988753 2
Q ss_pred CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccc
Q 038707 386 EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGT 465 (597)
Q Consensus 386 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl 465 (597)
...+|||++++. +|.-+|..... .++..++.+++.++..||.|+|... |+|||+|+.|+||+.++.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~v--r~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKV--RFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccc--cccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence 347899999965 88888876433 3889999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCc---eeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 466 SRSVMVDQT---HLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 466 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
++.+..... ...+...-|..|.+||.+.+ ..|+++.|||.-||+|.||++|.+-+++......-.++......+..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 987654322 22344556999999998766 67999999999999999999999988876544433332222111111
Q ss_pred C--------chhhhhhHH-hhhh---hhHH------HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 542 N--------RLFEALDAR-VLKE---AKKE------EIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 542 ~--------~~~~~l~~~-~~~~---~~~~------~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
. ++.+.+..+ +... ...+ ..++..+|+.++|..||.+|+++++++..
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1 111111101 0000 0011 12367899999999999999999998764
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=7.1e-32 Score=264.55 Aligned_cols=238 Identities=29% Similarity=0.402 Sum_probs=194.4
Q ss_pred CceEEEEEEec-CCcEEEEEEccccChhh-HHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhhHHhh
Q 038707 329 GQGTVYKGMLT-DGRIVAVKKSKLVDETN-VEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHN 406 (597)
Q Consensus 329 ~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 406 (597)
+||.||+|... +++.+++|......... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999987654444 78899999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccc
Q 038707 407 QIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGY 486 (597)
Q Consensus 407 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y 486 (597)
... +++..++.++.+++++|.+||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..|
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~ 152 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEY 152 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCC
Confidence 432 889999999999999999999998 9999999999999999999999999998765432 23345578899
Q ss_pred cCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHH
Q 038707 487 VDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVAT 566 (597)
Q Consensus 487 ~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 566 (597)
++||.+....++.++||||||+++++|++|..||......+ ............. .......+.++.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 219 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL------ELFKKIGKPKPPF-------PPPEWKISPEAKD 219 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH------HHHHHHhccCCCC-------ccccccCCHHHHH
Confidence 99999988889999999999999999999999986531111 1111111111100 0000004567889
Q ss_pred HHHHhcccCCCCCCCHHHHHH
Q 038707 567 LAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 567 li~~cl~~~p~~RPt~~evl~ 587 (597)
++.+||..+|++||++.++++
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHccCCchhccCHHHHhh
Confidence 999999999999999999986
No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-32 Score=288.65 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=207.2
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEe-----CC
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLE-----TE 386 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~~ 386 (597)
..++.|++.+.||+|.+|.||+++.. +++.+|+|++... .+..+++..|..+|+.+ .|||++.++|++.. .+
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34567889999999999999999964 6888999987754 33346677788899888 59999999999874 56
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
.+|||||||.+|+..|+++... ...+.|..+..|++.++.||.+||... ++|||||-.|||++.++.|||.|||++
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeee
Confidence 8999999999999999999865 566999999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCcccccc-----CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhc
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQS-----SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINE 541 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
...... ........||+.|||||++.. ..|+.++|+||||++..||--|.+|+-.+.+.- +.-.+..
T Consensus 171 aQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-------aLF~IpR 242 (953)
T KOG0587|consen 171 AQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-------ALFLIPR 242 (953)
T ss_pred eeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh-------hhccCCC
Confidence 876433 233455669999999999854 347889999999999999999999986543221 1111111
Q ss_pred CchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 542 NRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 542 ~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+ |......+....+++.++|..||..|-++||++.++++
T Consensus 243 N-------PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 243 N-------PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred C-------CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 11112224667888999999999999999999999875
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=9.6e-32 Score=286.63 Aligned_cols=262 Identities=19% Similarity=0.238 Sum_probs=182.8
Q ss_pred hcCCccCCcccccCceEEEEEEe-----------------cCCcEEEEEEccccChhhHHHHH--------------HHH
Q 038707 316 TDNYNANRILGQGGQGTVYKGML-----------------TDGRIVAVKKSKLVDETNVEQFI--------------NEV 364 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vaiK~~~~~~~~~~~~~~--------------~E~ 364 (597)
.++|++.++||+|+||+||+|.+ ..++.||||++........++|. .|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999964 23568999998764443333343 466
Q ss_pred HHHhhcCCCcc-----ceeeeEEEe--------CCcceEEEeccCCCChhhHHhhcCC---------------------C
Q 038707 365 VILSQINHRNI-----VKLLGCCLE--------TEVPLLVYEFIPNGTLYQYIHNQIE---------------------E 410 (597)
Q Consensus 365 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 410 (597)
.++.+++|.++ +++++++.. .+..+|||||+++++|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677777653 3567999999999999999975321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccccCcc
Q 038707 411 FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPE 490 (597)
Q Consensus 411 ~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE 490 (597)
..+++..+..++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++...............+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 13567889999999999999999999 999999999999999999999999999765432221112223578999999
Q ss_pred ccccCC----------------------CCcccceeehHHHHHHHHhCCC-CCCCCCCcCCC--c--HHHHHHHHHhcCc
Q 038707 491 YFQSSQ----------------------FTEKSDVYSFGVVLVEILTGQK-PIRAINTDEDK--S--LVGYFLQAINENR 543 (597)
Q Consensus 491 ~~~~~~----------------------~~~~sDv~SlG~il~ell~g~~-p~~~~~~~~~~--~--~~~~~~~~~~~~~ 543 (597)
.+.... ...+.||||+||++++|++|.. |+......... . .....+.......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 875432 1235799999999999999875 66432211100 0 0000000111110
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNG---KMRPTMKEVTNE 588 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p---~~RPt~~evl~~ 588 (597)
..........+...+|+.++|..+| .+|+|++|++++
T Consensus 461 --------~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 --------YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred --------CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0011122345668899999999766 689999999863
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=267.78 Aligned_cols=261 Identities=23% Similarity=0.334 Sum_probs=201.3
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCC--C----ccceeeeEEEeCCcc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINH--R----NIVKLLGCCLETEVP 388 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~~~~~~~~~~ 388 (597)
+++|.+.+.+|+|.||.|-...+. .+..||||+++.... -.+..+-|+++|.++.+ | -+|++.++|...+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 788999999999999999999875 478999999885433 34566779999999942 2 378888999999999
Q ss_pred eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC--------------
Q 038707 389 LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-------------- 454 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-------------- 454 (597)
+||+|.+ |-++.++|.++ ...+++...+..++.|+++++++||+.+ ++|-||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 9999998 66999999876 3457999999999999999999999999 999999999999931
Q ss_pred ------CCcEEEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCC
Q 038707 455 ------KYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED 528 (597)
Q Consensus 455 ------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~ 528 (597)
+..+||+|||.|+...... .....|..|.|||++.+-.++.++||||+||||+||.+|...|+.-+..|
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E- 316 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE- 316 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH-
Confidence 3468999999997654333 44567899999999999999999999999999999999999998755332
Q ss_pred CcHHH----------HHHHHH------hcCchh-----------hhhh---H-HhhhhhhHHHHHHHHHHHHHhcccCCC
Q 038707 529 KSLVG----------YFLQAI------NENRLF-----------EALD---A-RVLKEAKKEEIMTVATLAKRCLNLNGK 577 (597)
Q Consensus 529 ~~~~~----------~~~~~~------~~~~~~-----------~~l~---~-~~~~~~~~~~~~~l~~li~~cl~~~p~ 577 (597)
.+.. ...... ..+++. ...+ + .............|.+|+++||..||.
T Consensus 317 -HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 317 -HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred -HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 1111 000000 001000 0000 0 000111234455799999999999999
Q ss_pred CCCCHHHHHHH
Q 038707 578 MRPTMKEVTNE 588 (597)
Q Consensus 578 ~RPt~~evl~~ 588 (597)
+|+|+.|++..
T Consensus 396 ~RiTl~EAL~H 406 (415)
T KOG0671|consen 396 RRITLREALSH 406 (415)
T ss_pred ccccHHHHhcC
Confidence 99999999863
No 388
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=259.82 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=206.1
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL---VDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (597)
.+.|.++++||+|+|++|..+.+. +.+.+|+|.++. .+.+++.....|-.+..+. +||.+|.|+.+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467999999999999999999976 578899997663 3444555666677777666 69999999999999999999
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
|.||+++|+|--++.++.+ |+++.+.-+..+|..||.|||+.+ |+.||||.+|+|+|..|++||+|+|+.+...
T Consensus 329 vieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence 9999999999998887643 999999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcC-CCcHHHHHHHHHhcCchhhhhh
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE-DKSLVGYFLQAINENRLFEALD 549 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 549 (597)
.+ ...+....|||.|+|||++.+..|....|.|+|||+|+||+.|+.||+....+. +.+...+..+.+-+..+.
T Consensus 403 ~~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir---- 477 (593)
T KOG0695|consen 403 GP-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR---- 477 (593)
T ss_pred CC-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc----
Confidence 33 334667889999999999999999999999999999999999999998765443 344445555555443331
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcccCCCCCC
Q 038707 550 ARVLKEAKKEEIMTVATLAKRCLNLNGKMRP 580 (597)
Q Consensus 550 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP 580 (597)
.+...+.....+++.-|.+||.+|.
T Consensus 478 ------iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 ------IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ------ccceeehhhHHHHHHhhcCCcHHhc
Confidence 2334444566789999999999985
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.3e-31 Score=268.64 Aligned_cols=206 Identities=26% Similarity=0.372 Sum_probs=175.2
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
.-|...+.||-|+||+|.++.-. +...+|+|.+... ........+.|-.||...+.+.||+|+-.|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34777889999999999999843 4677899977643 3445667888999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc--
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM-- 470 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~-- 470 (597)
||++||++-.+|-+.. -+.++.+.-++.++.-|+++.|..| +|||||||+|||||.+|++||+||||..-+.
T Consensus 709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999998643 3788888899999999999999999 9999999999999999999999999965331
Q ss_pred -------CCCce--------------------------------eeecccccccccCccccccCCCCcccceeehHHHHH
Q 038707 471 -------VDQTH--------------------------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLV 511 (597)
Q Consensus 471 -------~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ 511 (597)
..... ......||+.|+|||++....++...|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 00000 001135999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCcCC
Q 038707 512 EILTGQKPIRAINTDED 528 (597)
Q Consensus 512 ell~g~~p~~~~~~~~~ 528 (597)
||+.|+.||......+.
T Consensus 863 em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGET 879 (1034)
T ss_pred HHhhCCCCccCCCCCcc
Confidence 99999999988776664
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3e-31 Score=241.31 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=195.9
Q ss_pred hcCCccCCcccccCceEEEEEEe-cCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeC--CcceEE
Q 038707 316 TDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGCCLET--EVPLLV 391 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 391 (597)
.++|++.+.+|+|.+++||.|.. .+++.++||.++ +...+.+.+|+.+|..|. ||||++|++...+. ..+.||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK---PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK---PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec---hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 46799999999999999999994 578899999988 445677899999999997 99999999999864 477899
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeecccccccc
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGTSRSVM 470 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfgl~~~~~ 470 (597)
+||+.+.+...+.. .++...+...+.|++.||.|+|+.| |+|||+||.|++||.. -.++|+|+|+|..+.
T Consensus 114 FE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 99999887766654 2788899999999999999999999 9999999999999864 569999999998876
Q ss_pred CCCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh--
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEA-- 547 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 547 (597)
...... ....+..|--||++.. ..|+..-|+|||||+|..|+..+.||....... .+++.. ...+....+...
T Consensus 185 p~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkI-akVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 185 PGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKI-AKVLGTDELYAYLN 260 (338)
T ss_pred CCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHH-HHHhChHHHHHHHH
Confidence 544332 2234556889999865 568899999999999999999999997544322 222211 111111111111
Q ss_pred -----hhHHhhh----------------hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 -----LDARVLK----------------EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 -----l~~~~~~----------------~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+|++... +...-..++..+|+.+.|..|..+|||++|.+.
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 2221111 000112367889999999999999999999875
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=283.99 Aligned_cols=245 Identities=27% Similarity=0.419 Sum_probs=188.9
Q ss_pred CccCCcccccCceE-EEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcceEEEeccC
Q 038707 319 YNANRILGQGGQGT-VYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 319 y~~~~~lg~G~~g~-Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
|.-.+++|.|+.|+ ||+|.. +|+.||||++- .+-..-..+|+..|+.- .|||||++++.-.++...||..|.+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44456899999987 899998 58899999875 33344567899999988 5999999999999999999999999
Q ss_pred CCChhhHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-----CCcEEEeecccccccc
Q 038707 397 NGTLYQYIHNQIEE-FPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-----KYRAKVSDFGTSRSVM 470 (597)
Q Consensus 397 ~gsL~~~l~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-----~~~~kl~Dfgl~~~~~ 470 (597)
.-+|.+++...... ........+.+..|+++||++||+.+ |+||||||.||||+. ...++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 45999999874111 11222456788999999999999999 999999999999965 3579999999999987
Q ss_pred CCCcee--eecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHHHHHhcCchhhh
Q 038707 471 VDQTHL--TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFLQAINENRLFEA 547 (597)
Q Consensus 471 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (597)
.+.... .....||-+|+|||++....-+.++|||||||++|+.++ |.+||...-..+. ..+..+.-...
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--------NIl~~~~~L~~ 734 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--------NILTGNYTLVH 734 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--------hhhcCccceee
Confidence 655443 345679999999999998888889999999999999999 5899965332220 00111000000
Q ss_pred hhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 548 LDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 548 l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+ +...+. +..+||.+|+.++|..||++.+|+.
T Consensus 735 L------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 L------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred e------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 001111 6789999999999999999999974
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-32 Score=269.34 Aligned_cols=242 Identities=24% Similarity=0.290 Sum_probs=201.8
Q ss_pred cCCccCCcccccCceEEEEEEecCCc-EEEEEEcc---ccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTDGR-IVAVKKSK---LVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-~vaiK~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
.+++....||-||||.|=++..+..+ .+|+|.++ ..+..+.+.+..|-.+|...+.|.||+++.-|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34555667999999999999876443 46766544 466677788999999999999999999999999999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
|-+-+|.|...|+... .+......-++..+++|++|||+++ |+.|||||+|.+||.+|-+||.|||+|+.+...
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999998643 4888889999999999999999999 999999999999999999999999999987543
Q ss_pred CceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHh
Q 038707 473 QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARV 552 (597)
Q Consensus 473 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (597)
..+-..+|||.|.|||++.+...+.++|.||||+++||||+|.+||.+.++-...+ .+-.| .-
T Consensus 574 --~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn-------~ILkG--------id 636 (732)
T KOG0614|consen 574 --RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN-------LILKG--------ID 636 (732)
T ss_pred --CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH-------HHHhh--------hh
Confidence 34566789999999999999999999999999999999999999998765433211 11111 11
Q ss_pred hhhhhHHHHHHHHHHHHHhcccCCCCCCC
Q 038707 553 LKEAKKEEIMTVATLAKRCLNLNGKMRPT 581 (597)
Q Consensus 553 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt 581 (597)
..+.+........+||++..+.+|.+|..
T Consensus 637 ~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 637 KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 12334555666789999999999999975
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=249.60 Aligned_cols=263 Identities=23% Similarity=0.310 Sum_probs=199.4
Q ss_pred ccCCcccccCceEEEEEEec-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCC-----cceEE
Q 038707 320 NANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD--ETNVEQFINEVVILSQINHRNIVKLLGCCLETE-----VPLLV 391 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 391 (597)
+-.+.||-|+||.||.+.+. +|+.||+|++...- -...+.+.+|+++|..++|.|++..++...-.. ++|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 33568999999999999975 79999999877532 334578999999999999999999998876433 45677
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccC
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~ 471 (597)
.|.|. .+|..++-. ..+++.+.+.-++.||++||.|||+.+ |.||||||.|.|++.|-.+||+|||+++....
T Consensus 136 TELmQ-SDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-hhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 88773 466666643 345899999999999999999999999 99999999999999999999999999998777
Q ss_pred CCceeeecccccccccCcccccc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHH--------HHHHhcC
Q 038707 472 DQTHLTTKVQGTFGYVDPEYFQS-SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF--------LQAINEN 542 (597)
Q Consensus 472 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 542 (597)
++...++...-|-.|.|||++++ ..|+.+.||||.|||+.||+.++..|+.-.+-+.-+++... ....-+|
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 76666777778999999999887 57999999999999999999999998876554432222111 1111112
Q ss_pred chhhhhhHH-------hhh--hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 543 RLFEALDAR-------VLK--EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 543 ~~~~~l~~~-------~~~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
.-..++... .+- ........+...+..+++..||+.|.+..+.+..+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111111110 000 11122233466788999999999999998887654
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=232.53 Aligned_cols=207 Identities=27% Similarity=0.403 Sum_probs=169.7
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhc-CCCccceeeeEEEeCCcc
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL-VDETNVEQFINEVVILSQI-NHRNIVKLLGCCLETEVP 388 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 388 (597)
++...+.......||+|++|.|-+-++. +|...|+|++.. .+.+...+.++|+.+..+- ..|.+|.++|...+....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 3444444555678999999999888864 799999998775 3455667788888877665 689999999999999999
Q ss_pred eEEEeccCCCChhhHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 389 LLVYEFIPNGTLYQYIHNQ-IEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 389 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
++.||.| ..+|+.+-++. ..+..+++..+-+|+..+..||.|||++-+ ++|||+||+||||+..|++|++|||.+-
T Consensus 121 wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccce
Confidence 9999999 56888877652 334569999999999999999999999763 9999999999999999999999999997
Q ss_pred cccCCCceeeecccccccccCcccccc----CCCCcccceeehHHHHHHHHhCCCCCCCC
Q 038707 468 SVMVDQTHLTTKVQGTFGYVDPEYFQS----SQFTEKSDVYSFGVVLVEILTGQKPIRAI 523 (597)
Q Consensus 468 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~SlG~il~ell~g~~p~~~~ 523 (597)
.+.+.-. .+...|-..|||||.+.. ..|+.|+||||||+++.||.+++.||...
T Consensus 198 ~L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 198 YLVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred eehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 6643221 222347778999998743 47999999999999999999999998653
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.7e-28 Score=234.51 Aligned_cols=211 Identities=36% Similarity=0.590 Sum_probs=184.4
Q ss_pred ccccCceEEEEEEecC-CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhh
Q 038707 325 LGQGGQGTVYKGMLTD-GRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQ 402 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 402 (597)
||+|.+|.||++...+ ++.+++|........ ..+.+.+|+..++.++|++|+++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999998754433 45789999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeeccccccccCCCceeeeccc
Q 038707 403 YIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGTSRSVMVDQTHLTTKVQ 481 (597)
Q Consensus 403 ~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 481 (597)
++.... ..+++..++.++.+++++|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~ 154 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIV 154 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhccc
Confidence 998642 34899999999999999999999998 999999999999999 89999999999976543321 123345
Q ss_pred ccccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHH
Q 038707 482 GTFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEE 560 (597)
Q Consensus 482 gt~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 560 (597)
+...|++||.+... ..+.++|+|+||+++++|
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 78889999998877 889999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 038707 561 IMTVATLAKRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 561 ~~~l~~li~~cl~~~p~~RPt~~evl~~L 589 (597)
..+.+++.+|++.+|++||++.++++.|
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4577899999999999999999998753
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=256.25 Aligned_cols=196 Identities=25% Similarity=0.368 Sum_probs=168.0
Q ss_pred CCccCCcccccCceEEEEEEecC-CcEEEEEEccccC---hh-----hHHHHHHHHHHHhhcC---CCccceeeeEEEeC
Q 038707 318 NYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVD---ET-----NVEQFINEVVILSQIN---HRNIVKLLGCCLET 385 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~---~~-----~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 385 (597)
.|...+.+|+|+||.|+.+.++. ...|+||.+.... .. ..-..-.||+||+.++ |+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 37888999999999999999874 5678888765311 11 1223567999999997 99999999999999
Q ss_pred CcceEEEeccC-CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 386 EVPLLVYEFIP-NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 386 ~~~~lv~e~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
+..||++|-.. +-+|.++|..+.+ +++.++..|++||+.|+++||+.+ |+|||||-+|+.++.+|-+||+|||
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 99999999865 5589999986543 999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCceeeecccccccccCccccccCCC-CcccceeehHHHHHHHHhCCCCCCC
Q 038707 465 TSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQF-TEKSDVYSFGVVLVEILTGQKPIRA 522 (597)
Q Consensus 465 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlG~il~ell~g~~p~~~ 522 (597)
.+..... .......||.+|.|||++.+..| ...-|||++|++||.++....||..
T Consensus 716 saa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 716 SAAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred chhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9876533 33556779999999999999876 5779999999999999999888863
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=264.57 Aligned_cols=253 Identities=27% Similarity=0.386 Sum_probs=208.3
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
.++|++...+|.|.+|.|||+++. .++..|+|.+++....+..-+.+|+.+++..+|||||.++|.+...+..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 357889999999999999999976 6999999999998888888889999999999999999999999999999999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
+.+|+|.+.-+. ..++++.++..+.++.+++|+|||+.+ -+|||||-.|||+++.+.+|++|||.+..+...-
T Consensus 94 cgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati- 166 (829)
T KOG0576|consen 94 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI- 166 (829)
T ss_pred cCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh-
Confidence 999999998774 346999999999999999999999999 7899999999999999999999999987764322
Q ss_pred eeeecccccccccCcccc---ccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHH
Q 038707 475 HLTTKVQGTFGYVDPEYF---QSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDAR 551 (597)
Q Consensus 475 ~~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (597)
.......||+.|||||+. ..+.|..++|||++|+...|+---++|.....+.. +...+... . .++.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~LmTkS-~---~qpp 235 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLMTKS-G---FQPP 235 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHhhcc-C---CCCC
Confidence 234456799999999985 45779999999999999999988888754322111 11111111 0 1111
Q ss_pred hhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 552 VLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 552 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.+ .....+.+.+|++.+|..+|++||+++.++.
T Consensus 236 ~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 TLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cccC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1122 3455677899999999999999999987654
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-27 Score=238.45 Aligned_cols=131 Identities=28% Similarity=0.398 Sum_probs=111.7
Q ss_pred cCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-----C---CccceeeeEEEeC--
Q 038707 317 DNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQIN-----H---RNIVKLLGCCLET-- 385 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~~-- 385 (597)
.+|.+.++||.|-|++||++.+. ..+.||+|+.+.. +.-.+..+.||++|++++ | .+||+|++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 67889999999999999999975 6789999998743 344577889999999983 3 4699999999854
Q ss_pred --CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEe
Q 038707 386 --EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILL 452 (597)
Q Consensus 386 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll 452 (597)
...++|+|++ |.+|..+|....-+. ++...+.+|++||+.||.|||.... |||-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrG-lpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRG-LPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeee
Confidence 4789999999 668999888754333 8999999999999999999999863 9999999999999
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=5.4e-29 Score=250.19 Aligned_cols=269 Identities=20% Similarity=0.236 Sum_probs=209.0
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC------CCccceeeeEEEe
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQIN------HRNIVKLLGCCLE 384 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~ 384 (597)
.+....+|.+....|+|-|++|-+|.++ .|..||||++.. ++.-...=+.|+++|++|+ .-|.++|+-.|..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn-NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN-NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec-chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3455678888899999999999999976 478999999874 3444456678999999995 3589999999999
Q ss_pred CCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeec
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDF 463 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Df 463 (597)
.++++||+|-+ ..+|.++|+......-|....+..++.|+.-||..|...+ |+|.||||+|||+++. ..+||+||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccC
Confidence 99999999988 5699999998777767899999999999999999999999 9999999999999876 45899999
Q ss_pred cccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHH-----HHH
Q 038707 464 GTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYF-----LQA 538 (597)
Q Consensus 464 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~-----~~~ 538 (597)
|.|....... .+.+.-+..|.|||++.+-.|+...|+||.||+||||.||+..|.+......-.+.+.. ..+
T Consensus 582 GSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Km 658 (752)
T KOG0670|consen 582 GSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKM 658 (752)
T ss_pred cccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHH
Confidence 9997654332 33444566799999999999999999999999999999999999876544321111111 011
Q ss_pred HhcCchh---------------------------hhhhH------Hh-----hhhhhHHHHHHHHHHHHHhcccCCCCCC
Q 038707 539 INENRLF---------------------------EALDA------RV-----LKEAKKEEIMTVATLAKRCLNLNGKMRP 580 (597)
Q Consensus 539 ~~~~~~~---------------------------~~l~~------~~-----~~~~~~~~~~~l~~li~~cl~~~p~~RP 580 (597)
++.+... ..+.| .+ +.+-.....+.|.+|+.+||..||++|.
T Consensus 659 lRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi 738 (752)
T KOG0670|consen 659 LRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI 738 (752)
T ss_pred hhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC
Confidence 1111110 00000 11 1112244567889999999999999999
Q ss_pred CHHHHHHH
Q 038707 581 TMKEVTNE 588 (597)
Q Consensus 581 t~~evl~~ 588 (597)
|..++|..
T Consensus 739 t~nqAL~H 746 (752)
T KOG0670|consen 739 TVNQALKH 746 (752)
T ss_pred CHHHHhcC
Confidence 99998863
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=7.2e-29 Score=236.72 Aligned_cols=260 Identities=25% Similarity=0.362 Sum_probs=195.2
Q ss_pred hcCCccCCcccccCceEEEEEEec-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeC------C
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKL--VDETNVEQFINEVVILSQINHRNIVKLLGCCLET------E 386 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 386 (597)
..+|.-++.+|.|+- .|-.+.+. .++.||+|++.. .+.....+..+|...+..++|+||++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777888999988 66666554 589999998653 3344566788999999999999999999999743 3
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
..|+|||+| ..+|...++.. ++.+.+..|+.|++.|+.|||+.+ |+||||||+||++..+..+||.|||++
T Consensus 95 e~y~v~e~m-~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILME-----LDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 568999999 56898888732 788899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCC----------------Cc
Q 038707 467 RSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED----------------KS 530 (597)
Q Consensus 467 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~----------------~~ 530 (597)
+....+ ..++.+..|..|.|||++.+..+.+.+||||+||++.||++|+.-|.+.+.-+. ..
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 865433 467778899999999999988899999999999999999999998875332110 00
Q ss_pred HHHHHHHHHhcCchhhhh-------hH--HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 531 LVGYFLQAINENRLFEAL-------DA--RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l-------~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
+....+...+...-.... |. ....+.+......+.+|+.+||..||++|.+++++|+
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000001111100000000 00 0000111122345779999999999999999999986
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.9e-27 Score=230.65 Aligned_cols=199 Identities=36% Similarity=0.536 Sum_probs=174.1
Q ss_pred CccCCcccccCceEEEEEEecC-CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccC
Q 038707 319 YNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
|.+.+.||+|++|.||++...+ ++.+++|........ ..+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999999875 899999998765544 67889999999999999999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+++|.+++...... +++..+..++.+++.+|.+||+.+ ++|+||+|.||+++.++.++|+|||.+..........
T Consensus 81 ~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 99999999864321 789999999999999999999998 9999999999999999999999999998765443112
Q ss_pred eecccccccccCcccc-ccCCCCcccceeehHHHHHHHHhCCCCCCC
Q 038707 477 TTKVQGTFGYVDPEYF-QSSQFTEKSDVYSFGVVLVEILTGQKPIRA 522 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~-~~~~~~~~sDv~SlG~il~ell~g~~p~~~ 522 (597)
.....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2334577889999998 667788899999999999999999999954
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2.6e-27 Score=234.34 Aligned_cols=265 Identities=25% Similarity=0.367 Sum_probs=197.9
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEec----CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCC
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLT----DGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETE 386 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 386 (597)
+....+.|...++||+|.|++||++.+. ..+.||+|.+...+ ....+.+|++.|..+. +.||+++.+++..++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3344567899999999999999999854 36789999877533 3456889999999995 999999999999999
Q ss_pred cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-CCcEEEeeccc
Q 038707 387 VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGT 465 (597)
Q Consensus 387 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl 465 (597)
...+|+||++.....++... ++..++..+++.++.||.++|..| |+||||||+|+|.+. .+.-.|.|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 99999999999999998864 778999999999999999999999 999999999999975 46789999999
Q ss_pred cccccCCC-------------------------------------------ceeeecccccccccCcccccc-CCCCccc
Q 038707 466 SRSVMVDQ-------------------------------------------THLTTKVQGTFGYVDPEYFQS-SQFTEKS 501 (597)
Q Consensus 466 ~~~~~~~~-------------------------------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~s 501 (597)
+....... ........||++|.|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 87211000 000112359999999999765 5678999
Q ss_pred ceeehHHHHHHHHhCCCCCCCCCCcCCCcHHH---HHH------HHHhcCc--hhh---------------hhh-HHhhh
Q 038707 502 DVYSFGVVLVEILTGQKPIRAINTDEDKSLVG---YFL------QAINENR--LFE---------------ALD-ARVLK 554 (597)
Q Consensus 502 Dv~SlG~il~ell~g~~p~~~~~~~~~~~~~~---~~~------~~~~~~~--~~~---------------~l~-~~~~~ 554 (597)
||||.|||++.+++++.||.....+-+ .+.+ .+- -+...+. +.+ -++ .....
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~-al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDAD-ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred ceeeccceeehhhccccccccCccccc-hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 999999999999999999975443321 1111 110 0001111 111 010 00000
Q ss_pred ---------hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 555 ---------EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 555 ---------~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
......+..+.+|+.+||..||.+|.|+++.|+.
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0011123368899999999999999999999863
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.3e-27 Score=218.78 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=186.9
Q ss_pred HhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeE-EEeCCcceEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGC-CLETEVPLLV 391 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~~~~~lv 391 (597)
..+.|.+.+.||+|.||.+-++.++ ..+.+++|.+. .......+|.+|...--.|. |.||+.-++. |+..+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp-~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVP-RPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccC-cchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3477999999999999999999986 56788888765 34556788999988777774 8999988765 5566677899
Q ss_pred EeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC--CCCcEEEeeccccccc
Q 038707 392 YEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGTSRSV 469 (597)
Q Consensus 392 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~--~~~~~kl~Dfgl~~~~ 469 (597)
+||+|.|+|.+-+.... +.+....+++.|+++||.|||+++ ++|||||.+||||- +..++||+|||+.+..
T Consensus 101 qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999998886533 788888999999999999999999 99999999999993 3448999999998754
Q ss_pred cCCCceeeecccccccccCcccccc---C--CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCch
Q 038707 470 MVDQTHLTTKVQGTFGYVDPEYFQS---S--QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRL 544 (597)
Q Consensus 470 ~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (597)
.. ......-+..|.+||.... + ...+.+|||.||++++.+|+|+.||+... ..+.....|.....+.+.
T Consensus 174 g~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~-~~d~~Y~~~~~w~~rk~~- 247 (378)
T KOG1345|consen 174 GT----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS-IMDKPYWEWEQWLKRKNP- 247 (378)
T ss_pred Cc----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh-ccCchHHHHHHHhcccCc-
Confidence 32 1222334667999998643 2 34688999999999999999999998433 333333333222221111
Q ss_pred hhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 545 FEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 545 ~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
.+.. .-...++.+..+.++-|..++++|=-..++.+
T Consensus 248 ------~~P~-~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 248 ------ALPK-KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred ------cCch-hhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 1111 11223445678888999999999844444443
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1e-26 Score=266.65 Aligned_cols=195 Identities=18% Similarity=0.234 Sum_probs=139.7
Q ss_pred hcCC-CccceeeeEE-------EeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 038707 369 QINH-RNIVKLLGCC-------LETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPI 440 (597)
Q Consensus 369 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 440 (597)
.++| +||+++++++ .+.+.+++++|++ +++|.++|... ...+++.+++.++.||++||.|||+++ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4556 6888888877 3334667889987 66999999753 235999999999999999999999999 9
Q ss_pred EeccCCCCCeEeCC-------------------CCcEEEeeccccccccCCC---------------ceeeecccccccc
Q 038707 441 YHRDIKSANILLDD-------------------KYRAKVSDFGTSRSVMVDQ---------------THLTTKVQGTFGY 486 (597)
Q Consensus 441 ~H~Dik~~NIll~~-------------------~~~~kl~Dfgl~~~~~~~~---------------~~~~~~~~gt~~y 486 (597)
+||||||+||||+. ++.+|++|||+++...... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456666667665321100 0001123578889
Q ss_pred cCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHH
Q 038707 487 VDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVAT 566 (597)
Q Consensus 487 ~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 566 (597)
||||++.+..++.++|||||||+||||++|..|+.... ... ..+.. ..+.+.. .........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----~~~----~~~~~----~~~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----RTM----SSLRH----RVLPPQI-----LLNWPKEAS 243 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----HHH----HHHHH----hhcChhh-----hhcCHHHHH
Confidence 99999999999999999999999999999888764211 000 00000 0111111 111234568
Q ss_pred HHHHhcccCCCCCCCHHHHHH
Q 038707 567 LAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 567 li~~cl~~~p~~RPt~~evl~ 587 (597)
++.+||+.+|.+||++.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 889999999999999999975
No 405
>PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding
Probab=99.93 E-value=3e-26 Score=194.49 Aligned_cols=100 Identities=46% Similarity=0.772 Sum_probs=86.3
Q ss_pred CCCCCCcCCeeeecCCCCCCCCCCCCCCceeecCCCCCCcccCCCCcceeeecccccccceeeeecccccccCCCCC---
Q 038707 1 RICQSECGNISISYPFGIGHECFLDKSFEVICNYSGKYPKAYLPGINNLELLDGDSYYESTIRVNFPIISLKNPSNA--- 77 (597)
Q Consensus 1 ~~C~~~CG~v~IpyPFgi~~~C~~~~~F~l~C~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~--- 77 (597)
|+||++||||+|||||||+++|++.++|+|+|++++++|++++.+. +++|++| +|++++++|..++.+.|.....
T Consensus 2 ~~C~~~CGnv~IpYPFgi~~~C~~~~~F~L~C~~~~~~~~l~l~~~-~~~V~~I-~~~~~~i~v~~~~~~~~~~~~~~~~ 79 (106)
T PF13947_consen 2 PGCPSSCGNVSIPYPFGIGPGCGRDPGFELTCNNNTSPPKLLLSSG-NYEVLSI-SYENGTIRVSDPISSNCYSSSSSNS 79 (106)
T ss_pred CCCCCccCCEeecCCCccCCCCCCCCCcEEECCCCCCCceeEecCC-cEEEEEE-ecCCCEEEEEeccccceecCCCCcc
Confidence 7999999999999999999999995599999999988888988555 5999999 9999999999999888743322
Q ss_pred --CceeecCCCeEeccCCceEEEEcccc
Q 038707 78 --RGVNLSGSPFTFSNISNRFAAIGCDD 103 (597)
Q Consensus 78 --~~~~~~~~pf~~s~~~n~~~~~gC~~ 103 (597)
..+++.+ ||++|+++|.|+++||++
T Consensus 80 ~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 80 SNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred cccEEeecC-CceEccCCcEEEEECCCC
Confidence 2345555 899999999999999985
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.9e-25 Score=208.75 Aligned_cols=169 Identities=22% Similarity=0.261 Sum_probs=127.4
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|.++++.. +.++++.+++.++.||+.||.|||+.+ ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc----
Confidence 6899999864 235999999999999999999999876 999999999999999 99987653321
Q ss_pred ecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAK 557 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 557 (597)
..||+.|||||++.+..++.++||||||+++|||++|+.||...... .............. ++.. ....
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~------~~~~-~~~~ 132 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPAD------DPRD-RSNL 132 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhccC------Cccc-cccH
Confidence 25889999999999999999999999999999999999998643211 11111111111100 0000 0011
Q ss_pred HHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 558 KEEIM--TVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 558 ~~~~~--~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
..... ++.+++.+||+.+|.+||++.|+++.+..+..
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 22222 68999999999999999999999999987654
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-24 Score=208.33 Aligned_cols=265 Identities=18% Similarity=0.247 Sum_probs=212.4
Q ss_pred hcCCccCCcccccCceEEEEEEe-cCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEe
Q 038707 316 TDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 393 (597)
.-+|++.++||+|.||+++.|+. -++++||||.-.. ..+..++..|....+.|. .++|..++-+..+.-.-.||+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 45799999999999999999994 4799999997654 334467888999888885 6999999988888889999999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-----CCcEEEeecccccc
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-----KYRAKVSDFGTSRS 468 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-----~~~~kl~Dfgl~~~ 468 (597)
.+ +-+|+|++.=+.++ ++.+.+..+|.|++.-++|+|++. +|.|||||+|+||.. ...+.|+|||+++.
T Consensus 105 LL-GPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hh-CcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 99 77999988766554 899999999999999999999999 999999999999964 34689999999998
Q ss_pred ccCCCcee------eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 469 VMVDQTHL------TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 469 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
+..+.+.. .....||..||+=..+.+.+.+.+.|+-|||-+++++|-|..||++......+...+. +.+.
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK----IGe~ 254 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK----IGET 254 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH----hccc
Confidence 87655443 2335699999999999999999999999999999999999999998776653332221 1111
Q ss_pred chhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhhcC
Q 038707 543 RLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTSIG 597 (597)
Q Consensus 543 ~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~~~ 597 (597)
+- .-...+.....+.++..-++-.=..+-.+-|+.+-+.+.+..+.+.+|
T Consensus 255 Kr-----~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g 304 (449)
T KOG1165|consen 255 KR-----STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLG 304 (449)
T ss_pred cc-----cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcC
Confidence 10 011123344556677777777777888999999999888888877654
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=8.3e-24 Score=217.10 Aligned_cols=261 Identities=22% Similarity=0.259 Sum_probs=198.9
Q ss_pred CCccCCcccccCceEEEEEEecC--CcEEEEEEccccChhhHHHHHHHHHHHhhcCC----CccceeeeEE-EeCCcceE
Q 038707 318 NYNANRILGQGGQGTVYKGMLTD--GRIVAVKKSKLVDETNVEQFINEVVILSQINH----RNIVKLLGCC-LETEVPLL 390 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 390 (597)
+|.+.+.||+|+||.||++.... .+.+|+|............+..|+.++..+.. +++.++++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999765 35788887665433333378889999999873 6899999999 47778899
Q ss_pred EEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-----CcEEEeeccc
Q 038707 391 VYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-----YRAKVSDFGT 465 (597)
Q Consensus 391 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-----~~~kl~Dfgl 465 (597)
||+.+ +.+|.++..... ...++...++.|+.|++.+|.+||+.| ++||||||+|+++... ..++|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 779999887665 445999999999999999999999999 9999999999999754 4699999999
Q ss_pred cc--cccCCCc----ee---eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHH
Q 038707 466 SR--SVMVDQT----HL---TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 466 ~~--~~~~~~~----~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 536 (597)
++ ....... .. .....||..|.+++.+.+...+.+.|+||++.++.||+.|..||........... +.
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~---~~ 250 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK---FE 250 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---HH
Confidence 98 4322221 11 2345599999999999999999999999999999999999999976543332111 11
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
........ .. .....+..+.++...+-..+..++|....+.+.|+.+...
T Consensus 251 ~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 251 KDPRKLLT----DR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHhhhhcc----cc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 11111000 00 1122234455666666668999999999999998776543
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.4e-24 Score=197.88 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=208.5
Q ss_pred HhcCCccCCcccccCceEEEEEEe-cCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC-CccceeeeEEEeCCcceEEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGML-TDGRIVAVKKSKLVDETNVEQFINEVVILSQINH-RNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 392 (597)
..++|.+.+.||.|+||.+|.|.. .+|+.||||.-.. .....++..|..+...|++ ..|+.+..+..+.+.-.|||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~--~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS--KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecc--cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 357899999999999999999994 5799999997553 2333567789999999975 78888888899999999999
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC---CCcEEEeeccccccc
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD---KYRAKVSDFGTSRSV 469 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfgl~~~~ 469 (597)
|.+ +-+|.+++.-..+. ++.+.++-++-|++.-++|+|.++ ++||||||+|+|..- ...+.|+|||+|+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhh
Confidence 998 77999998876554 889999999999999999999999 999999999999953 357999999999887
Q ss_pred cCCCcee------eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 470 MVDQTHL------TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 470 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
....+.. .....||..|.+-..+.+.+.+.+.|+-|+|.+|.++.-|..||++.......+..+......
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK---- 240 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK---- 240 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh----
Confidence 6433221 334569999998888877888999999999999999999999999877655433322221111
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhhh
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRTS 595 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~~ 595 (597)
-...........+.++.-.+.-|=..--++-|+..-+-+.+.-|...
T Consensus 241 -----~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 241 -----MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred -----cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 11112223445567788888889888889999988887777766543
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=7e-24 Score=217.24 Aligned_cols=169 Identities=19% Similarity=0.143 Sum_probs=131.8
Q ss_pred HHHHHHHhcCCccCCcccccCceEEEEEEec--CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCccce-eee
Q 038707 309 SKDLEKATDNYNANRILGQGGQGTVYKGMLT--DGRIVAVKKSKLV-----DETNVEQFINEVVILSQINHRNIVK-LLG 380 (597)
Q Consensus 309 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vaiK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~ 380 (597)
.+......++|.+.+.||+|+||+||+|.+. +++.+|||+.... .....+.+.+|+++|++++|+|+++ ++.
T Consensus 10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~ 89 (365)
T PRK09188 10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA 89 (365)
T ss_pred ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence 3344456678999999999999999999875 5777899985432 2334567999999999999999985 443
Q ss_pred EEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccC-CCCCeEeCCCCcEE
Q 038707 381 CCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDI-KSANILLDDKYRAK 459 (597)
Q Consensus 381 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Di-k~~NIll~~~~~~k 459 (597)
.+..+|||||+++++|... .. .. ...++.|++++|.|||+.+ |+|||| ||+|||++.++.+|
T Consensus 90 ----~~~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ik 152 (365)
T PRK09188 90 ----TGKDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAA 152 (365)
T ss_pred ----cCCcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEE
Confidence 2467999999999999632 11 11 1467899999999999999 999999 99999999999999
Q ss_pred EeeccccccccCCCcee-------eecccccccccCcccccc
Q 038707 460 VSDFGTSRSVMVDQTHL-------TTKVQGTFGYVDPEYFQS 494 (597)
Q Consensus 460 l~Dfgl~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 494 (597)
|+|||+++......... .....+++.|+|||++..
T Consensus 153 LiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 153 VIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999998765322111 134567888999999854
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-23 Score=195.49 Aligned_cols=250 Identities=19% Similarity=0.312 Sum_probs=191.0
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCC
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLV--DETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (597)
.+..+|.+...|+.|+|+++.+ .++.|++... ......+|..|.-.|+-+.||||+.+++.|.....+.++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 3445688899999999999754 4455554432 222345788899999999999999999999999999999999999
Q ss_pred CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee
Q 038707 398 GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT 477 (597)
Q Consensus 398 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~ 477 (597)
|+|...|++.. ....+..++.+++..||+|++|||+.... |.---|.+..+++|++.+++|+-=. .+. +...
T Consensus 272 gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep~-ipr~~lns~hvmidedltarismad-~kf-----sfqe 343 (448)
T KOG0195|consen 272 GSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPM-IPRFYLNSKHVMIDEDLTARISMAD-TKF-----SFQE 343 (448)
T ss_pred hHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchh-hhhhhcccceEEecchhhhheeccc-cee-----eeec
Confidence 99999999864 34577889999999999999999998853 4445689999999999888774211 111 0011
Q ss_pred ecccccccccCccccccCCC---CcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhh
Q 038707 478 TKVQGTFGYVDPEYFQSSQF---TEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLK 554 (597)
Q Consensus 478 ~~~~gt~~y~aPE~~~~~~~---~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (597)
....-.|.||+||.++..+- -.++|+|||.++||||.|+..||....+-|-. +.+--..+..
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------------mkialeglrv 408 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------------MKIALEGLRV 408 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------------hhhhhccccc
Confidence 11224678999999987654 35899999999999999999999876654421 1111122333
Q ss_pred hhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhh
Q 038707 555 EAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIR 593 (597)
Q Consensus 555 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~ 593 (597)
..++..+..+..|+.-|+..||.+||.+..|+-.|++++
T Consensus 409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 445666777899999999999999999999999999875
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2.5e-21 Score=197.89 Aligned_cols=261 Identities=31% Similarity=0.403 Sum_probs=197.8
Q ss_pred CccCCcccccCceEEEEEEecCCcEEEEEEccccChh---hHHHHHHHHHHHhhcCCC-ccceeeeEEEeCCcceEEEec
Q 038707 319 YNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET---NVEQFINEVVILSQINHR-NIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 394 (597)
|.+.+.||.|+|+.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999987 78888887653332 477899999999999988 799999999777778999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~~~~~~~ 473 (597)
+.+++|.+++........+.......++.|++.++.|+|+.+ ++|||+||+||+++... .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765421124899999999999999999999999 99999999999999998 79999999997554333
Q ss_pred ce-----eeecccccccccCcccccc---CCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchh
Q 038707 474 TH-----LTTKVQGTFGYVDPEYFQS---SQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLF 545 (597)
Q Consensus 474 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (597)
.. ......++..|+|||.+.. ...+...|+||+|++++++++|..||...... .........+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 22 2456679999999999987 57899999999999999999999996654331 0011111111111100
Q ss_pred hhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 546 EALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 546 ~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.................+.+++.+++..+|..|.++.+....
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223467899999999999999999887654
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=6.5e-23 Score=223.70 Aligned_cols=253 Identities=21% Similarity=0.279 Sum_probs=191.4
Q ss_pred ccCCcccccCceEEEEEEec-CCcEEEEEEc-----cccChhh-HHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 320 NANRILGQGGQGTVYKGMLT-DGRIVAVKKS-----KLVDETN-VEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~-----~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
...+++|.|++|.|+..... ..+..+.|.. ....+.. ...+..|+.+-..+.|+|++..+....+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 35678999999987777643 3333343322 1112222 223677888888999999998888877777666669
Q ss_pred eccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCC
Q 038707 393 EFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD 472 (597)
Q Consensus 393 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~ 472 (597)
||++. +|..++... ..++..++-.+++|++.|+.|||+.+ |.|||+|++|++++.++.+||+|||.+.....+
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999999864 23888999999999999999999999 999999999999999999999999999876644
Q ss_pred Cc---eeeecccccccccCccccccCCCCc-ccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhh
Q 038707 473 QT---HLTTKVQGTFGYVDPEYFQSSQFTE-KSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 548 (597)
Q Consensus 473 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (597)
.. .......|...|+|||++....|++ ..||||.|+++..|++|+.||.....++... ......+.. ..
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~~~-~~- 546 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSDQR-NI- 546 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcccccc-cc-
Confidence 33 4556677999999999999988876 6899999999999999999998765554321 001001100 00
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 549 DARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 549 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
..-........+.+-..++.+||+.+|.+|.|+++|++
T Consensus 547 -~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 -FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00112233555667789999999999999999999986
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=3.1e-22 Score=217.68 Aligned_cols=248 Identities=20% Similarity=0.278 Sum_probs=182.2
Q ss_pred CCccCCcccccCceEEEEEEecCCcEEEEEEcccc-ChhhHHHHH---HHHHHHhhcCCCccceeeeEEEeCCcceEEEe
Q 038707 318 NYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLV-DETNVEQFI---NEVVILSQINHRNIVKLLGCCLETEVPLLVYE 393 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~-~~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (597)
++...+.||.+.|=+|.++++++|. |+||..-.. +......|. .|++ ...++|||.+++.-........|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6788899999999999999998887 788865432 233344444 4444 555689999999888777778889999
Q ss_pred ccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 394 FIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 394 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
|+.+ +|.|.|..+. -+..-+...|+.|++.||.-+|..+ |+|||||.+||||+.-.-+.|+||..-+....++
T Consensus 102 yvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9854 8999887543 3778888999999999999999999 9999999999999999999999998665433222
Q ss_pred c------eeeecccccccccCcccccc----------CC-CCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHH
Q 038707 474 T------HLTTKVQGTFGYVDPEYFQS----------SQ-FTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYF 535 (597)
Q Consensus 474 ~------~~~~~~~gt~~y~aPE~~~~----------~~-~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~ 535 (597)
. ........-.+|+|||.+.. .. ++++.||||+||++.||++ |++||.- .++..|
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aY- 247 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAY- 247 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhH-
Confidence 1 12223334568999998643 12 6789999999999999999 7888742 111111
Q ss_pred HHHHhcCchhhhhhH-HhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 038707 536 LQAINENRLFEALDA-RVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGG 591 (597)
Q Consensus 536 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~ 591 (597)
+.+. ..++ ..++. -....+.+||..|++.||++|.++++.|+.-.+
T Consensus 248 ----r~~~---~~~~e~~Le~---Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 248 ----RSGN---ADDPEQLLEK---IEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred ----hccC---ccCHHHHHHh---CcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1110 0011 11111 112257899999999999999999999987544
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=1.4e-21 Score=186.42 Aligned_cols=172 Identities=12% Similarity=0.124 Sum_probs=134.4
Q ss_pred HHhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChh---hHHH------HHHHHHHHhhcCCCccceeeeEEEe
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET---NVEQ------FINEVVILSQINHRNIVKLLGCCLE 384 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~------~~~E~~~l~~l~h~niv~l~~~~~~ 384 (597)
...++|+..++||+|+||.||+... ++..+|||.+...... ..+. +.+|+..+.++.|++|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4468899999999999999999655 5778999987643222 2223 5789999999999999999988664
Q ss_pred C--------CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC
Q 038707 385 T--------EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY 456 (597)
Q Consensus 385 ~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~ 456 (597)
. ...+|+|||++|.+|.++.. ++. ....+++.+|..||+.+ ++|||+||+||++++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence 4 35789999999999988732 332 24569999999999999 99999999999999988
Q ss_pred cEEEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHH
Q 038707 457 RAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEIL 514 (597)
Q Consensus 457 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell 514 (597)
++|+|||.......+... ..++....+..++|+||||+++..+.
T Consensus 173 -i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988654321111 01334456778999999999988765
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=8.1e-21 Score=179.05 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=108.6
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChh--h-------H-----------------HHHHHHHHHHhhcCCCcc
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET--N-------V-----------------EQFINEVVILSQINHRNI 375 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~ni 375 (597)
...||+|++|.||+|...+|+.||||.++..... . . ....+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999987643211 1 1 122359999999988877
Q ss_pred ceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEeccCCCCCeEeCC
Q 038707 376 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYL-HSAASIPIYHRDIKSANILLDD 454 (597)
Q Consensus 376 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~i~H~Dik~~NIll~~ 454 (597)
........ ...+|||||++++++...+... ..+++..+..++.|++.+|.+| |+.+ |+||||||+|||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence 44333222 2348999999988776553322 3488999999999999999999 6888 999999999999984
Q ss_pred CCcEEEeeccccccc
Q 038707 455 KYRAKVSDFGTSRSV 469 (597)
Q Consensus 455 ~~~~kl~Dfgl~~~~ 469 (597)
+.++|+|||++...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 78999999999654
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=2.2e-20 Score=194.80 Aligned_cols=217 Identities=24% Similarity=0.470 Sum_probs=166.4
Q ss_pred HhhcCCCccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EeccC
Q 038707 367 LSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPI-YHRDI 445 (597)
Q Consensus 367 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i-~H~Di 445 (597)
|+.+.|.|+.+++|.+.+....++|.+|+..|+|.|.+... ...+++.....+++.|+.||.|||+.. | .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeee
Confidence 45789999999999999999999999999999999999873 345899999999999999999999876 4 99999
Q ss_pred CCCCeEeCCCCcEEEeeccccccccC-CCceeeecccccccccCccccccC-------CCCcccceeehHHHHHHHHhCC
Q 038707 446 KSANILLDDKYRAKVSDFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSS-------QFTEKSDVYSFGVVLVEILTGQ 517 (597)
Q Consensus 446 k~~NIll~~~~~~kl~Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDv~SlG~il~ell~g~ 517 (597)
++.|.++|..+.+||+|||+...... ..........-..-|.|||.+... ..+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999876642 111111222245579999998653 2477899999999999999999
Q ss_pred CCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 518 KPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 518 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
.||......++. .+.+.. ++.+ ....+.|.+... .+..+++..++.+||..+|.+||++++|-..++.+..
T Consensus 156 ~~~~~~~~~~~~--~eii~~-~~~~-~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILR-VKKG-GSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCCh--HHHHHH-HHhc-CCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999876555443 111111 2220 111111211111 1444578999999999999999999999999887765
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.4e-19 Score=171.18 Aligned_cols=139 Identities=21% Similarity=0.197 Sum_probs=110.7
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChh--------------------------hHHHHHHHHHHHhhcCCCcc
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET--------------------------NVEQFINEVVILSQINHRNI 375 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 375 (597)
.+.||+|++|.||+|.+.+|+.||||........ ....+..|+..+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999987643211 01234678999999999987
Q ss_pred ceeeeEEEeCCcceEEEeccCCCChhhH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeC
Q 038707 376 VKLLGCCLETEVPLLVYEFIPNGTLYQY-IHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLD 453 (597)
Q Consensus 376 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~ 453 (597)
.....+... ..+|||||++++++... +.. ..++......++.|++.+|.+||+ .+ |+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE
Confidence 544443332 34899999998865443 332 247888999999999999999999 88 99999999999999
Q ss_pred CCCcEEEeecccccccc
Q 038707 454 DKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 454 ~~~~~kl~Dfgl~~~~~ 470 (597)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999997654
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=6.3e-20 Score=180.25 Aligned_cols=233 Identities=21% Similarity=0.269 Sum_probs=152.3
Q ss_pred CCccCCcccccCceEEEEEEec-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCC----------CccceeeeEEE
Q 038707 318 NYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLV---DETNVEQFINEVVILSQINH----------RNIVKLLGCCL 383 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~---~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 383 (597)
.....+.||.|+++.||.+++. +++.+|+|..... .....+++++|......+.+ -.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455679999999999999987 5899999975432 23346777777766655432 12222222222
Q ss_pred e---------C---C-----cceEEEeccCCCChhhHHhh---cC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 038707 384 E---------T---E-----VPLLVYEFIPNGTLYQYIHN---QI-EEFPITWELLLRIAVEVSGALFYLHSAASIPIYH 442 (597)
Q Consensus 384 ~---------~---~-----~~~lv~e~~~~gsL~~~l~~---~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H 442 (597)
- . + ..+++|+-+ .++|.+++.. .. ....+....++.+..|+++.+++||+.+ ++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 1 1 1 125677777 5688888653 11 1223556667788899999999999999 999
Q ss_pred ccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccccCcccccc--------CCCCcccceeehHHHHHHHH
Q 038707 443 RDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQS--------SQFTEKSDVYSFGVVLVEIL 514 (597)
Q Consensus 443 ~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~SlG~il~ell 514 (597)
+||+|+|++++.+|.++|+||+....... . ......+..|.+||.... -.++.+.|.|+||+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~-~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT---R-YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE---E-EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc---e-eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999987654321 1 111345678999997643 24788999999999999999
Q ss_pred hCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCC
Q 038707 515 TGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMR 579 (597)
Q Consensus 515 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 579 (597)
++..||........... ...... +.++.+..||..+|++||.+|
T Consensus 245 C~~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999986544332211 122333 788889999999999999988
No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.1e-19 Score=202.12 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=166.8
Q ss_pred ccCHHHHHHHhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcC---CCccceeeeEE
Q 038707 306 LFTSKDLEKATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQIN---HRNIVKLLGCC 382 (597)
Q Consensus 306 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 382 (597)
+-...+++.....|.+.+.||+|+||+||+|...+|+.||||.-+....- +|.--.+++.+|+ -+-|+.+..++
T Consensus 687 l~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 687 LNPNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred cCccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHH
Confidence 33445666677889999999999999999999888999999987653322 2222234444444 35566677777
Q ss_pred EeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC-------CC
Q 038707 383 LETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD-------DK 455 (597)
Q Consensus 383 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~-------~~ 455 (597)
.-.+.-+||+||.+.|||.+++.. ...++|.....++.|++..++.||..+ |||+||||+|+||. ++
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred ccCCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcc
Confidence 778888999999999999999983 334999999999999999999999999 99999999999994 34
Q ss_pred CcEEEeeccccccccC-CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCC
Q 038707 456 YRAKVSDFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 518 (597)
Q Consensus 456 ~~~kl~Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~ 518 (597)
..++|+|||.+-.+.. .........++|-.+--+|...+..++..+|.|.|+.+++-||.|+.
T Consensus 838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 5689999999876653 23345667778999999999999999999999999999999999985
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=2.5e-19 Score=167.26 Aligned_cols=188 Identities=16% Similarity=0.049 Sum_probs=139.4
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEccccChh----hHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEec
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET----NVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++|++|. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997765 6778887766643321 1225789999999995 5889999886 446999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccC-CCCCeEeCCCCcEEEeeccccccccCCC
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDI-KSANILLDDKYRAKVSDFGTSRSVMVDQ 473 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Di-k~~NIll~~~~~~kl~Dfgl~~~~~~~~ 473 (597)
+.+.+|...+.. . ...++.|++++|.++|+++ |+|||| ||+|||++.++.++|+|||++.......
T Consensus 80 I~G~~L~~~~~~---------~-~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR---------G-DLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh---------h-hHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999888654321 1 1357889999999999999 999999 7999999999999999999997543222
Q ss_pred ce----e--------eecccccccccCcccccc--CCCCcccceeehHHHHHHHHhCCCCCCCCCC
Q 038707 474 TH----L--------TTKVQGTFGYVDPEYFQS--SQFTEKSDVYSFGVVLVEILTGQKPIRAINT 525 (597)
Q Consensus 474 ~~----~--------~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlG~il~ell~g~~p~~~~~~ 525 (597)
.. . ......++.|++|+...- ..--...+.++-|..+|.++|+..|.....+
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 10 0 011225677788775322 2223567889999999999999988765443
No 422
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=8.5e-21 Score=197.54 Aligned_cols=225 Identities=25% Similarity=0.323 Sum_probs=178.1
Q ss_pred cccccCceEEEEEEe----cCCcEEEEEEccccCh--hhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEeccC
Q 038707 324 ILGQGGQGTVYKGML----TDGRIVAVKKSKLVDE--TNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~----~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 396 (597)
.+|+|.||.|+++.- +.+..+|+|..+.... ........|..++...+ ||.++++.-.++.....++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998652 3466777776543211 11125667888888887 9999999999999999999999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL 476 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~ 476 (597)
+|.|...+.... ...+.....+...++-+++++|+.+ |+|||+|++||+++.+|++|+.|||+++........
T Consensus 81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 999988886543 3667777778889999999999999 999999999999999999999999999876543332
Q ss_pred eecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhh
Q 038707 477 TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEA 556 (597)
Q Consensus 477 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (597)
+||..|||||++. .....+|.||||++++||++|..||.. + ......+. .-..
T Consensus 154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~------~~~~Il~~-----------~~~~ 206 (612)
T KOG0603|consen 154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----D------TMKRILKA-----------ELEM 206 (612)
T ss_pred ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----H------HHHHHhhh-----------ccCC
Confidence 7899999999998 678899999999999999999999975 1 01111110 1123
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCH
Q 038707 557 KKEEIMTVATLAKRCLNLNGKMRPTM 582 (597)
Q Consensus 557 ~~~~~~~l~~li~~cl~~~p~~RPt~ 582 (597)
+.+....+.+++..++..+|..|.-.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 45666778889999999999999765
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.2e-18 Score=165.73 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=106.3
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhc-----CCCccceeeeEEEeCC---c-ceE
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQI-----NHRNIVKLLGCCLETE---V-PLL 390 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 390 (597)
.-.+.||+|++|.||. +......+||+.........+++.+|+.+++.+ .||||+++++++.++. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3456899999999996 433233379987765455667899999999999 5799999999998874 3 337
Q ss_pred EEec--cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEeccCCCCCeEeCC----CCcEEEeec
Q 038707 391 VYEF--IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGAL-FYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDF 463 (597)
Q Consensus 391 v~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~~~i~H~Dik~~NIll~~----~~~~kl~Df 463 (597)
|+|| .++++|.+++.+. .+++. ..++.|++.++ +|||+++ |+||||||+|||++. +..++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 5579999999653 25555 35677888777 9999999 999999999999974 347999995
Q ss_pred ccc
Q 038707 464 GTS 466 (597)
Q Consensus 464 gl~ 466 (597)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=1.1e-17 Score=161.14 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=113.8
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccCh--------hhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDE--------TNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
+.||+|++|.||+|.. .+..+++|+...... .....+.+|+.++..+.|++++....++.+.+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677888997543211 1234678899999999999998887777788889999999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
+++++|.+++... .+ .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998643 12 78899999999999999999 99999999999999 78999999998854
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.74 E-value=8e-19 Score=179.55 Aligned_cols=242 Identities=21% Similarity=0.300 Sum_probs=163.6
Q ss_pred CccCCcccccCceEEEEEEecC----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeee-------EEE----
Q 038707 319 YNANRILGQGGQGTVYKGMLTD----GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLG-------CCL---- 383 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-------~~~---- 383 (597)
..+.+..+..+++.++...... .+-++-+.....+-.......+++..+....|.+..-+.+ ...
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v 325 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV 325 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence 4455566666777666655332 2334444444333233334444555555544433332222 111
Q ss_pred -eCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEee
Q 038707 384 -ETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 462 (597)
Q Consensus 384 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~D 462 (597)
....+++.|+++...+|.++|.........++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||.|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhh
Confidence 123478999999999999999866555568889999999999999999 67 89999999999999999999999
Q ss_pred ccccccccCCC-----ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHh-CCCCCCCCCCcCCCcHHHHHH
Q 038707 463 FGTSRSVMVDQ-----THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILT-GQKPIRAINTDEDKSLVGYFL 536 (597)
Q Consensus 463 fgl~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~ 536 (597)
||+........ ....+...||..||+||.+.+..|+.|+||||||++|+||+. =..++. -..+.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----------r~~t~ 469 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----------RIATL 469 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----------HHHhh
Confidence 99987765444 224455679999999999999999999999999999999997 111211 11122
Q ss_pred HHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 038707 537 QAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEV 585 (597)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev 585 (597)
.-++++.+.+ ....+.+. -..|+.+++.+.|.+||++.++
T Consensus 470 ~d~r~g~ip~----~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 470 TDIRDGIIPP----EFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhhcCCCCh----HHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 3334444331 11122121 2479999999999999954443
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=9.6e-18 Score=164.83 Aligned_cols=196 Identities=23% Similarity=0.240 Sum_probs=139.9
Q ss_pred CCCccceeeeEEEeC---------------------------CcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHH
Q 038707 371 NHRNIVKLLGCCLET---------------------------EVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAV 423 (597)
Q Consensus 371 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 423 (597)
+|||||++++.|.++ ..+||||...+ -+|.+|+..+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 699999999887542 23578998874 48999997653 66677778999
Q ss_pred HHHHHHHHHHhCCCCCeEeccCCCCCeEe--CCC--CcEEEeeccccccccC-----CCceeeecccccccccCcccccc
Q 038707 424 EVSGALFYLHSAASIPIYHRDIKSANILL--DDK--YRAKVSDFGTSRSVMV-----DQTHLTTKVQGTFGYVDPEYFQS 494 (597)
Q Consensus 424 qi~~~L~~LH~~~~~~i~H~Dik~~NIll--~~~--~~~kl~Dfgl~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~ 494 (597)
|+++|+.|||.++ |.|||+|++|||+ |++ -.+.|+|||.+-.... +.....-..-|...-||||+...
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999 9999999999999 333 3589999998743221 11111112236778999999754
Q ss_pred CC------CCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHH
Q 038707 495 SQ------FTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLA 568 (597)
Q Consensus 495 ~~------~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li 568 (597)
.+ .-.|+|.|+.|.+.||+++...||......- +... .+.+ .-+...+...+..+.+|+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~---L~~r--------~Yqe----~qLPalp~~vpp~~rqlV 490 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML---LDTR--------TYQE----SQLPALPSRVPPVARQLV 490 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe---echh--------hhhh----hhCCCCcccCChHHHHHH
Confidence 32 2369999999999999999999998622111 1000 0000 111223455667789999
Q ss_pred HHhcccCCCCCCCHHHHHHHH
Q 038707 569 KRCLNLNGKMRPTMKEVTNEL 589 (597)
Q Consensus 569 ~~cl~~~p~~RPt~~evl~~L 589 (597)
...|++||++|++..-....|
T Consensus 491 ~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHhcCCccccCCccHHHhHH
Confidence 999999999999876665554
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.9e-17 Score=159.31 Aligned_cols=143 Identities=17% Similarity=0.121 Sum_probs=111.8
Q ss_pred cCCccCCcccccCceEEEEEE--ecCCcEEEEEEccccChh------------------------hHHHHHHHHHHHhhc
Q 038707 317 DNYNANRILGQGGQGTVYKGM--LTDGRIVAVKKSKLVDET------------------------NVEQFINEVVILSQI 370 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~--~~~~~~vaiK~~~~~~~~------------------------~~~~~~~E~~~l~~l 370 (597)
.-|.+.+.||+|++|.||+|. ..+|+.||||........ ....+..|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 348888999999999999998 457999999987643210 112356899999999
Q ss_pred CCC--ccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCC
Q 038707 371 NHR--NIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSA 448 (597)
Q Consensus 371 ~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~ 448 (597)
.+. .++++++. ...+|||||+++.+|....... ..+.......++.||+.+|.+||+.+. |+|+||||+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp~ 178 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSEY 178 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCChh
Confidence 753 34455543 2358999999998887765322 235666778999999999999999873 999999999
Q ss_pred CeEeCCCCcEEEeeccccccc
Q 038707 449 NILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 449 NIll~~~~~~kl~Dfgl~~~~ 469 (597)
||+++ ++.++|+|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 789999999998654
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=8.6e-17 Score=153.29 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=111.7
Q ss_pred HHHHhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccCh----------------------hhHHHHHHHHHHHhh
Q 038707 312 LEKATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDE----------------------TNVEQFINEVVILSQ 369 (597)
Q Consensus 312 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~----------------------~~~~~~~~E~~~l~~ 369 (597)
+......|.+.+.||+|+||.||++...+|+.||||+...... .....+..|+.++..
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 3333345888899999999999999988899999997543210 011236778999999
Q ss_pred cCCCc--cceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCC
Q 038707 370 INHRN--IVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKS 447 (597)
Q Consensus 370 l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~ 447 (597)
+.|++ +++.++ ....++||||+++++|.+.... .....++.+++.++.++|+.+ |+|+||||
T Consensus 90 l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 90 LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 98874 444443 3456899999999998765421 235678899999999999998 99999999
Q ss_pred CCeEeCCCCcEEEeecccccccc
Q 038707 448 ANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 448 ~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
+||++++++.++|+|||++....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999996543
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=1.3e-16 Score=152.14 Aligned_cols=130 Identities=21% Similarity=0.303 Sum_probs=107.1
Q ss_pred cccccCceEEEEEEecCCcEEEEEEccccC--------hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEecc
Q 038707 324 ILGQGGQGTVYKGMLTDGRIVAVKKSKLVD--------ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 395 (597)
.||+|++|.||+|.+ ++..+++|...... .....++.+|++++..+.|+++....-+..+.+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 56789999744311 112366789999999999887666555666777789999999
Q ss_pred CCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 396 PNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 396 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
++++|.+++.... . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999876421 1 78999999999999999 99999999999999 78999999998854
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.5e-16 Score=174.38 Aligned_cols=137 Identities=20% Similarity=0.281 Sum_probs=112.2
Q ss_pred hcCCccCCcccccCceEEEEEEecCCcEEEEEE-c-ccc------ChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCc
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTDGRIVAVKK-S-KLV------DETNVEQFINEVVILSQINHRNIVKLLGCCLETEV 387 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~-~-~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 387 (597)
...|...++||+|+||+||+|.+.... +++|+ . +.. .....+.+.+|+++++.++|++++....+..+.+.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 345567889999999999999876443 33332 2 111 11224568899999999999999988888878788
Q ss_pred ceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 388 PLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 388 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.++||||+++++|.+++. ....++.+++++|.+||+.+ ++||||||+|||+ +++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999999885 34678999999999999999 9999999999999 67799999999996
Q ss_pred c
Q 038707 468 S 468 (597)
Q Consensus 468 ~ 468 (597)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 431
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=1.8e-17 Score=180.98 Aligned_cols=209 Identities=26% Similarity=0.367 Sum_probs=146.0
Q ss_pred hcCCccCCcccccCceEEEEEEecC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
...|+..+.|..|++|.||...++. .+.+|+|.-+. .. -+++ ++.....|.+ |
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq---~l--ilRn---ilt~a~npfv---------------v--- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ---NL--ILRN---ILTFAGNPFV---------------V--- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc---ch--hhhc---cccccCCcce---------------e---
Confidence 4678889999999999999998874 56677754331 00 0001 2222223332 2
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT 474 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~ 474 (597)
|+=...++.- .+++.+. +.+++|||+.+ |+|||+||+|.||+.-|++|++|||+++.......
T Consensus 136 ---gDc~tllk~~---g~lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLLKNI---GPLPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhcccC---CCCcchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 3333333321 2243333 78999999999 99999999999999999999999999876432111
Q ss_pred e--------------eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 475 H--------------LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 475 ~--------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
. ......||+.|+|||++....|....|+|++|+|+||++-|..||.+..+++. |.+.+.
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel------fg~vis 272 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL------FGQVIS 272 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH------Hhhhhh
Confidence 1 12335699999999999999999999999999999999999999998776662 333332
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCC
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPT 581 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt 581 (597)
+...+ .+.....+.+++++|.+.|+.+|..|.-
T Consensus 273 d~i~w--------pE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 273 DDIEW--------PEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hhccc--------cccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 22111 1112344567889999999999999953
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.9e-15 Score=140.46 Aligned_cols=136 Identities=21% Similarity=0.221 Sum_probs=98.9
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChh--hHHH----------------------HHHHHHHHhhcCCC--cc
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET--NVEQ----------------------FINEVVILSQINHR--NI 375 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~--ni 375 (597)
.+.||+|+||+||+|...+++.||||........ .... ...|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999888999999976542211 1111 13556666666443 34
Q ss_pred ceeeeEEEeCCcceEEEeccCCCChhhH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeccCCCCCeEeC
Q 038707 376 VKLLGCCLETEVPLLVYEFIPNGTLYQY-IHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASIPIYHRDIKSANILLD 453 (597)
Q Consensus 376 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~i~H~Dik~~NIll~ 453 (597)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. .+ |+|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE
Confidence 445543 346899999998554322 21110 11 5678899999999999999 88 99999999999999
Q ss_pred CCCcEEEeecccccccc
Q 038707 454 DKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 454 ~~~~~kl~Dfgl~~~~~ 470 (597)
++.++|+|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999996553
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=6.6e-15 Score=133.10 Aligned_cols=135 Identities=23% Similarity=0.211 Sum_probs=114.5
Q ss_pred cCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC--CccceeeeEEEeCCcceEEEeccCCC
Q 038707 321 ANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINH--RNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| .++++++.+....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35689999999999999854 7899998765433 5678899999999976 58999999888888899999999887
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
.+..+ +......++.+++++|.+||......++|+|++|+||++++.+.++++|||.+..
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77543 4566778899999999999997544599999999999999989999999998864
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=6.6e-17 Score=176.73 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=193.4
Q ss_pred hcCCccCCcccccCceEEEEEEecC--CcEEEEEEccccC--hhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceE
Q 038707 316 TDNYNANRILGQGGQGTVYKGMLTD--GRIVAVKKSKLVD--ETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLL 390 (597)
Q Consensus 316 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 390 (597)
...|.+.+.||+|+|+.|-...... ...+|+|...... ....+....|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3468888889999999998887643 4556667655432 334555666888888887 9999999999999999999
Q ss_pred EEeccCCCChhhHH-hhcCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEeccCCCCCeEeCCCC-cEEEeeccccc
Q 038707 391 VYEFIPNGTLYQYI-HNQIEEFPITWELLLRIAVEVSGALFYLH-SAASIPIYHRDIKSANILLDDKY-RAKVSDFGTSR 467 (597)
Q Consensus 391 v~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfgl~~ 467 (597)
+.||..++++.+.+ +.... ..+.......+.|+..++.|+| ..+ +.|+||||+|.+++..+ ..|++|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999988 43321 3666777889999999999999 888 99999999999999999 99999999998
Q ss_pred cccC--CCceeeecccc-cccccCccccccC-CCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCc
Q 038707 468 SVMV--DQTHLTTKVQG-TFGYVDPEYFQSS-QFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 543 (597)
Q Consensus 468 ~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 543 (597)
.+.. ..........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+......... +..++....
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-----~~~~~~~~~ 248 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-----YSSWKSNKG 248 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-----ceeeccccc
Confidence 8765 33344555668 9999999998874 5678999999999999999999998765443311 111111100
Q ss_pred hhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 038707 544 LFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVT 586 (597)
Q Consensus 544 ~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl 586 (597)
. ..............+++.+++..+|..|.+.+++-
T Consensus 249 ~-------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 249 R-------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred c-------cccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0 00111233344567889999999999999988764
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.8e-14 Score=140.78 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=105.0
Q ss_pred Cccc-ccCceEEEEEEecCCcEEEEEEcccc-------------ChhhHHHHHHHHHHHhhcCCCcc--ceeeeEEEeCC
Q 038707 323 RILG-QGGQGTVYKGMLTDGRIVAVKKSKLV-------------DETNVEQFINEVVILSQINHRNI--VKLLGCCLETE 386 (597)
Q Consensus 323 ~~lg-~G~~g~Vy~~~~~~~~~vaiK~~~~~-------------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~ 386 (597)
.+|| .||.|+||++... +..++||+.... .......+.+|+.++.+|+|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8889999998874 678888865321 11234568899999999998775 67777654432
Q ss_pred c----ceEEEeccCC-CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEe
Q 038707 387 V----PLLVYEFIPN-GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVS 461 (597)
Q Consensus 387 ~----~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~ 461 (597)
. .++|||++++ .+|.+++... +++.. .+.+|+++|.+||+.+ |+|+||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 3599999997 6899888642 24543 3568999999999999 9999999999999998899999
Q ss_pred eccccccc
Q 038707 462 DFGTSRSV 469 (597)
Q Consensus 462 Dfgl~~~~ 469 (597)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988653
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=7.5e-13 Score=140.62 Aligned_cols=141 Identities=19% Similarity=0.178 Sum_probs=101.2
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChhhH----------------------------------------HHHH
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNV----------------------------------------EQFI 361 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~----------------------------------------~~~~ 361 (597)
.+.||.|++|.||+|++.+|+.||||.......... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999998654211110 1255
Q ss_pred HHHHHHhhcC----CCccceeeeEEE-eCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 038707 362 NEVVILSQIN----HRNIVKLLGCCL-ETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSG-ALFYLHSA 435 (597)
Q Consensus 362 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~~ 435 (597)
+|+..+.++. |.+-+.+-..+. ..+..+|||||+++++|.++....... . ....++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHHHHHHHHHHHhC
Confidence 5666666652 332233322332 245679999999999999887542111 2 23456666665 47888998
Q ss_pred CCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 436 ASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 436 ~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
+ ++|+|+||.||+++++++++|+|||++....
T Consensus 277 g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 G---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 9999999999999999999999999997664
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=1.6e-13 Score=132.40 Aligned_cols=202 Identities=19% Similarity=0.268 Sum_probs=139.6
Q ss_pred HHHhhcCCCccceeeeEEEeC-----CcceEEEeccCCCChhhHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 038707 365 VILSQINHRNIVKLLGCCLET-----EVPLLVYEFIPNGTLYQYIHNQIE-EFPITWELLLRIAVEVSGALFYLHSAASI 438 (597)
Q Consensus 365 ~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 438 (597)
.-|-++-|.|||+++.+..+. ....++.|||..|+|..+|++..+ ...+..+...+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence 345566799999999987654 346789999999999999987432 345888899999999999999999987 6
Q ss_pred CeEeccCCCCCeEeCCCCcEEEeeccccccccC----CCceeeecccccccccCccccccCCCCcccceeehHHHHHHHH
Q 038707 439 PIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV----DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEIL 514 (597)
Q Consensus 439 ~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell 514 (597)
||+|+++..+-|++..++-+|+.--- ...... ..........+.++|.+||.=.....+.++|||+||...+||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 69999999999999999888874321 111100 0001112233678999999877777888999999999999998
Q ss_pred hCCCCCCCCC-CcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 038707 515 TGQKPIRAIN-TDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNE 588 (597)
Q Consensus 515 ~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~ 588 (597)
.+..--.... ..+.+..... .++ .+... .=..++.+|++..|..||+|++++..
T Consensus 277 ilEiq~tnseS~~~~ee~ia~--------~i~-~len~-----------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIAN--------VII-GLENG-----------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HheeccCCCcceeehhhhhhh--------hee-eccCc-----------cccCcCcccccCCCCCCcchhhhhcC
Confidence 7664211100 0000000000 000 00000 11358899999999999999998764
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=3.7e-13 Score=140.90 Aligned_cols=247 Identities=22% Similarity=0.289 Sum_probs=182.3
Q ss_pred CCccCCcccc--cCceEEEEEEe--c-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcce
Q 038707 318 NYNANRILGQ--GGQGTVYKGML--T-DGRIVAVKKSKL--VDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 318 ~y~~~~~lg~--G~~g~Vy~~~~--~-~~~~vaiK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 389 (597)
.+...+.+|. |.+|.||.+.. . ++..+|+|+.+. ........=++|+.....++ |+|.++.+..+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3556677888 99999999986 3 588899998443 33344444456777777774 999999999999999999
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEeccCCCCCeEeCCC-CcEEEeecc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSG----ALFYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFG 464 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfg 464 (597)
+-.|++. .+|.++.+.-.. .++...++....+..+ ||.++|+.. ++|-|+||.||++.++ ...+++|||
T Consensus 195 iqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 9999884 788888876432 3778888888888888 999999999 9999999999999999 889999999
Q ss_pred ccccccCCCce----eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHh
Q 038707 465 TSRSVMVDQTH----LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAIN 540 (597)
Q Consensus 465 l~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 540 (597)
+...+....-. ......+...|++||..+ ..++.++|+|++|.+..+..++..+........- ...+
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W--------~~~r 339 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSW--------SQLR 339 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCc--------cccc
Confidence 99877644311 122235788999999876 5678999999999999999998776543211110 0000
Q ss_pred cCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 038707 541 ENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTN 587 (597)
Q Consensus 541 ~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~ 587 (597)
. .. +..+.......++...+..|++.+|-.|++.+.+..
T Consensus 340 ~--~~------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 Q--GY------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c--cc------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 00 111222223334556889999999999998887654
No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.37 E-value=1e-11 Score=131.27 Aligned_cols=165 Identities=19% Similarity=0.210 Sum_probs=129.8
Q ss_pred cCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHH
Q 038707 339 TDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELL 418 (597)
Q Consensus 339 ~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~ 418 (597)
.++.+|.|...+..+....+...+.++.|+.++||||++++.........|||.|.+. .|..++++ +.....
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v 106 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEV 106 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHH
Confidence 3678888887776666666778899999999999999999999999999999999883 67778875 446677
Q ss_pred HHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccccCccccccCCCC
Q 038707 419 LRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFT 498 (597)
Q Consensus 419 ~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 498 (597)
..-+.||+.||.|||+.+. ++|++|..+.|++++.|..||.+|.+......... ......--..|..|+.+....
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--
Confidence 7889999999999987653 99999999999999999999999988754432111 111112223466776554322
Q ss_pred cccceeehHHHHHHHHhC
Q 038707 499 EKSDVYSFGVVLVEILTG 516 (597)
Q Consensus 499 ~~sDv~SlG~il~ell~g 516 (597)
-..|.|.||++++|++.|
T Consensus 182 ~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhhHHHHHHHHhCc
Confidence 456999999999999999
No 440
>PF08488 WAK: Wall-associated kinase; InterPro: IPR013695 This domain is found together with the eukaryotic protein kinase domain IPR000719 from INTERPRO in plant wall-associated kinases (WAKs) and related proteins. WAKs are serine-threonine kinases which might be involved in signalling to the cytoplasm and are required for cell expansion []. ; GO: 0004674 protein serine/threonine kinase activity, 0016021 integral to membrane
Probab=99.34 E-value=4e-12 Score=105.50 Aligned_cols=97 Identities=24% Similarity=0.465 Sum_probs=67.6
Q ss_pred CCcccccccccc--CC-cceeEeeeeeccc-cccCCcceEEEEeccceeecccCCChhhhhccCCCcceeEeeeeecCCc
Q 038707 130 RGCYDFLCALSS--NI-TQVFNANLSYIYS-QNISRGCRSVSVVEENWVGSKYLENPLVLKQQARDIPALLDWGEDIGHC 205 (597)
Q Consensus 130 ~~c~g~~cc~~~--~~-~~~~~~~~~~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vLdW~i~~~~C 205 (597)
..|+|.+|||+. .+ ++++++++..... ..+..+|.+|||||+.||.++..+... .+..+.+||+|+|+|...+.
T Consensus 2 ~~CsG~~CCQt~iP~~~~qv~~~~i~~~~~~~~~~~~Ck~AFL~d~~~~~~n~t~p~~--~~~~~y~pv~L~W~i~t~~~ 79 (103)
T PF08488_consen 2 SSCSGIGCCQTSIPSGLLQVFNVTIESTDGNNQTSNGCKVAFLVDEDWFSSNITDPED--FHAMGYVPVVLDWFIDTSDS 79 (103)
T ss_pred CccCCcceeccCCCCCCceEEEEEeEecCCCcccCCCceEEEEeccccccccCCChHH--hccCCeeEEEEEEEEecCCc
Confidence 579999999998 33 5678887776543 233479999999999999776544433 24567799999999975433
Q ss_pred cccCCCccccccCCCCceeccCCCCceeeecC
Q 038707 206 AEDFSLYSTTICGDGEYRCSITFGSGYICRCR 237 (597)
Q Consensus 206 ~~~~~~~~~~~C~s~~~c~~~~~~~gy~C~C~ 237 (597)
. ...+++|....+ .+. ..+|.|.
T Consensus 80 ~----~~~s~~C~~~~~-y~~----~~~C~C~ 102 (103)
T PF08488_consen 80 S----FSNSLACKNNTE-YSS----SNRCSCS 102 (103)
T ss_pred C----cCcCccCCCcee-ccC----CCcEeCC
Confidence 2 223578888744 222 1289986
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1.2e-11 Score=114.67 Aligned_cols=129 Identities=22% Similarity=0.141 Sum_probs=96.3
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcc-ceeeeEEEeCCcceEEEeccCCCChh
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNI-VKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
+.|+.|..+.||++... ++.+++|....... ....+..|+.+++.+.+.++ ++++... .+..++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 56889999999999875 77899998754322 23356789999999865554 4455443 33468999999998876
Q ss_pred hHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 402 QYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAA--SIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 402 ~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
+.. . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++||+.+.
T Consensus 80 ~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 530 1 11245678999999999987 22359999999999999 5689999999875
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=3.4e-11 Score=129.52 Aligned_cols=144 Identities=17% Similarity=0.161 Sum_probs=96.9
Q ss_pred cCCccCCcccccCceEEEEEEecC-CcEEEEEEccccChh------------------------------h----H----
Q 038707 317 DNYNANRILGQGGQGTVYKGMLTD-GRIVAVKKSKLVDET------------------------------N----V---- 357 (597)
Q Consensus 317 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~~~~~------------------------------~----~---- 357 (597)
..|+. +.||.|++|.||+|++++ |+.||||.....-.. . .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 789999999999999987 999999987532110 0 1
Q ss_pred --HHHHHHHHHHhhcC----CCccceeeeEEEe-CCcceEEEeccCCCChhhHH--hhcC-CCCCCCHHHHHHHHHHHHH
Q 038707 358 --EQFINEVVILSQIN----HRNIVKLLGCCLE-TEVPLLVYEFIPNGTLYQYI--HNQI-EEFPITWELLLRIAVEVSG 427 (597)
Q Consensus 358 --~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~-~~~~l~~~~~~~i~~qi~~ 427 (597)
-+|.+|+..+.+++ +.+.+.+=..+.+ ....+|||||++|+.|.++- .... ....+....+..++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 12445555555552 3333444344433 45678999999999998753 2211 11124444444445554
Q ss_pred HHHHHHhCCCCCeEeccCCCCCeEeCCCC----cEEEeeccccccccC
Q 038707 428 ALFYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGTSRSVMV 471 (597)
Q Consensus 428 ~L~~LH~~~~~~i~H~Dik~~NIll~~~~----~~kl~Dfgl~~~~~~ 471 (597)
+..+ ++|+|+||.||+++.++ ++++.|||+...+..
T Consensus 277 -----f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -----FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3467 99999999999999888 999999999877643
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=1.4e-10 Score=108.49 Aligned_cols=136 Identities=17% Similarity=0.144 Sum_probs=100.0
Q ss_pred CCcccccCceEEEEEEecC-------CcEEEEEEcccc-------------C---------hhhHHHHH----HHHHHHh
Q 038707 322 NRILGQGGQGTVYKGMLTD-------GRIVAVKKSKLV-------------D---------ETNVEQFI----NEVVILS 368 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~-------~~~vaiK~~~~~-------------~---------~~~~~~~~----~E~~~l~ 368 (597)
...||.|--+.||.|...+ +..+|||..+.. + ......+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998543 478999953320 0 11122333 8999999
Q ss_pred hcCC--CccceeeeEEEeCCcceEEEeccCCCChhh-HHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecc
Q 038707 369 QINH--RNIVKLLGCCLETEVPLLVYEFIPNGTLYQ-YIHNQIEEFPITWELLLRIAVEVSGALFYL-HSAASIPIYHRD 444 (597)
Q Consensus 369 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~i~H~D 444 (597)
++.. -++++++++ ..-+|||||+.+..+.. .+++ ..++.++...+..+++.+|..| |..+ |+|+|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGD 150 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHAD 150 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence 9953 567777764 56789999997654422 2222 1255566778889999999999 8888 99999
Q ss_pred CCCCCeEeCCCCcEEEeeccccccc
Q 038707 445 IKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 445 ik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
|++.|||+++ +.++|+|||.+-..
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999974 58999999988654
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=2.4e-10 Score=103.28 Aligned_cols=131 Identities=22% Similarity=0.274 Sum_probs=101.5
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccc--------cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEec
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKL--------VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEF 394 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~--------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (597)
..+.+|+-+.+|.+.+. |.++++|.-.. ...-..+.-.+|+.++++++--.|.-.+=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46889999999999764 44577774221 1112345677899999999765655555566677788899999
Q ss_pred cCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 395 IPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 395 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
+++..|.+++... ...++..+-.-+.-||..+ |+|+||.++||++.... +.++||||+..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999898754 2456777777888899999 99999999999998774 99999999964
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=6.2e-10 Score=100.00 Aligned_cols=143 Identities=22% Similarity=0.260 Sum_probs=108.6
Q ss_pred cCCcccccCceEEEEEEecCCcEEEEEEccc--------cChhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEE
Q 038707 321 ANRILGQGGQGTVYKGMLTDGRIVAVKKSKL--------VDETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 321 ~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~--------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (597)
...+|-||+-+.|+++.+ .|+..+||.-.. ...-...+.++|++.|.++.--.|.-..=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456889999999999988 477878874321 11223556789999999987655555555566777778999
Q ss_pred eccCC-CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCC---cEEEeecccccc
Q 038707 393 EFIPN-GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKY---RAKVSDFGTSRS 468 (597)
Q Consensus 393 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~Dfgl~~~ 468 (597)
||+++ .++.+++....... ........+++.|-+.+.-||..+ |+|+||..+||+|..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 48889988754432 233333789999999999999999 99999999999996544 458999999854
No 446
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.15 E-value=7.1e-10 Score=113.91 Aligned_cols=169 Identities=23% Similarity=0.355 Sum_probs=130.2
Q ss_pred CceEEEEEEec-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEEE----eCCcceEEEeccCC-CChhh
Q 038707 329 GQGTVYKGMLT-DGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCCL----ETEVPLLVYEFIPN-GTLYQ 402 (597)
Q Consensus 329 ~~g~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gsL~~ 402 (597)
--.+.|++... +|..+++|++.............-++..+++.|.|||++.+++. .+..++|||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 34678999865 89999999985433344444556678899999999999999887 34467899999985 57777
Q ss_pred HHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccccc
Q 038707 403 YIHNQIE------------EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVM 470 (597)
Q Consensus 403 ~l~~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~ 470 (597)
+.-.... ...+++..+|.++.|+..||.++|+.| +.-+-|.+.+||++.+-+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 6543211 124678999999999999999999999 8899999999999999999999998876654
Q ss_pred CCCceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCC
Q 038707 471 VDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 518 (597)
Q Consensus 471 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~ 518 (597)
.+.. |.+.. -.+-|.-.||.+++.|.+|..
T Consensus 445 ~d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT---------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC---------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 4331 11111 126788899999999999864
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=4e-10 Score=109.08 Aligned_cols=142 Identities=19% Similarity=0.225 Sum_probs=110.9
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCC--CccceeeeEEEeCC---cceEEEeccC
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDE-TNVEQFINEVVILSQINH--RNIVKLLGCCLETE---VPLLVYEFIP 396 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~~~ 396 (597)
+.|+.|..+.||++...+|+.+++|....... .....+..|+++++.+.+ .++++++.+..+.. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999998764322 235678899999999976 44677777766543 5689999999
Q ss_pred CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 038707 397 NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAA---------------------------------------- 436 (597)
Q Consensus 397 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------------------- 436 (597)
+.++.+.+.. ..++..+...++.+++++|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9988776532 23677788888889999999888631
Q ss_pred -------------CCCeEeccCCCCCeEeCC--CCcEEEeecccccc
Q 038707 437 -------------SIPIYHRDIKSANILLDD--KYRAKVSDFGTSRS 468 (597)
Q Consensus 437 -------------~~~i~H~Dik~~NIll~~--~~~~kl~Dfgl~~~ 468 (597)
...++|+|+++.|||++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134799999999999998 66789999987753
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=2.9e-11 Score=126.84 Aligned_cols=261 Identities=19% Similarity=0.200 Sum_probs=184.2
Q ss_pred ccccCHHH-HHHHhcCCccCCcccccCceEEEEEEec--CCcEEEEEEccccChhhH--HHHHHHHHHHhhc-CCCccce
Q 038707 304 TKLFTSKD-LEKATDNYNANRILGQGGQGTVYKGMLT--DGRIVAVKKSKLVDETNV--EQFINEVVILSQI-NHRNIVK 377 (597)
Q Consensus 304 ~~~~~~~~-~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vaiK~~~~~~~~~~--~~~~~E~~~l~~l-~h~niv~ 377 (597)
.+++..++ ......+|..+..||.|.|+.|++...+ ++..+++|.+........ ..-..|+.+...+ .|.+++.
T Consensus 251 ~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g 330 (524)
T KOG0601|consen 251 ANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVG 330 (524)
T ss_pred hheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCC
Confidence 34555555 4445677999999999999999988754 577889987654333222 2335677777777 4899999
Q ss_pred eeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCC-C
Q 038707 378 LLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDK-Y 456 (597)
Q Consensus 378 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~ 456 (597)
....+...+..++-.||++++++...+.- ...+.+..++++..|++.++.++|+.. ++|+|+||+||++..+ +
T Consensus 331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 331 KNSSWSQLRQGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGF 404 (524)
T ss_pred CCCCccccccccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchh
Confidence 88888888888899999999988776632 223788889999999999999999988 9999999999999876 7
Q ss_pred cEEEeeccccccccCCCceeeeccccccccc--CccccccCCCCcccceeehHHHHHHHHhCCCCCCCCCCcCCCcHHHH
Q 038707 457 RAKVSDFGTSRSVMVDQTHLTTKVQGTFGYV--DPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY 534 (597)
Q Consensus 457 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~~~~~~~~~~~~~~~ 534 (597)
..++.|||.+..+.... .. ....-+++ +|+......+-.+.|++|||.-+.+.+++..--.. ...
T Consensus 405 ~~~~~~~~~~t~~~~~~---~~-~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-----~~~---- 471 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSS---GV-FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-----GVQ---- 471 (524)
T ss_pred hhhccccccccccceec---cc-ccccccccccchhhccccccccccccccccccccccccCcccCcc-----ccc----
Confidence 88999999886422111 11 11222344 55556667889999999999999999987743111 000
Q ss_pred HHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhhh
Q 038707 535 FLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVTNELGGIRT 594 (597)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl~~L~~l~~ 594 (597)
...++.+.. ...+. ....+..+.+.++..++..||.+.++....+-.++
T Consensus 472 -~~~i~~~~~---------p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 472 -SLTIRSGDT---------PNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred -ceeeecccc---------cCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 001111111 11111 12557788899999999999999988877665554
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.02 E-value=5.8e-11 Score=130.82 Aligned_cols=250 Identities=23% Similarity=0.271 Sum_probs=171.9
Q ss_pred HHhcCCccCCcccccCceEEEEEEec-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCccceeeeEEEeCCcce
Q 038707 314 KATDNYNANRILGQGGQGTVYKGMLT-DGRIVAVKKSKLVD---ETNVEQFINEVVILSQINHRNIVKLLGCCLETEVPL 389 (597)
Q Consensus 314 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (597)
...+.+.+.+-+-.|.++.++.+.-. .|...++|...... ..+.+..+.+-.++-..+||-++...--+.-....+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34566777888999999999987743 34444444333221 222233333333333344565555544455667889
Q ss_pred EEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 390 LVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 390 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
|+++|..+++|...|+... ..+.+........+.++++|||+.. +.|+|++|.|+|+..++..+++||+.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999998643 3566666677788899999999987 899999999999999999999999832221
Q ss_pred c-C----CC-------------------------ceeeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCC
Q 038707 470 M-V----DQ-------------------------THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKP 519 (597)
Q Consensus 470 ~-~----~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p 519 (597)
. . +. ........+|+.|.+||.+.+......+|+|++|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 1 0 00 0011224589999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHH
Q 038707 520 IRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMK 583 (597)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ 583 (597)
|.....+.. | +.+-.+.+. ..........+..+++...+..+|.+|..+.
T Consensus 1035 ~na~tpq~~------f-~ni~~~~~~-------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQI------F-ENILNRDIP-------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhhh------h-hccccCCCC-------CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 986554431 1 111111110 1112334455677899999999999997665
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.99 E-value=4.1e-09 Score=105.76 Aligned_cols=266 Identities=18% Similarity=0.183 Sum_probs=161.8
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccceeeeEE-------EeCCcceEEE
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIVKLLGCC-------LETEVPLLVY 392 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-------~~~~~~~lv~ 392 (597)
...+.||+|+.+.+|-.-.- +..| -|+...-......+... ++.+.-.||-+-.-+.+= ......-+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~V-AKIYh~Pppa~~aqk~a--~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQV-AKIYHAPPPAAQAQKVA--ELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchh-hchh-heeecCCCchHHHHHHH--HhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 34578999999999954311 1122 23322211222222111 122222455433211110 1122356778
Q ss_pred eccCCC-ChhhHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 393 EFIPNG-TLYQYIHNQIE---EFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 393 e~~~~g-sL~~~l~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
..+++. .+..++.-..+ -....|+..++++++++.+.+.||.+| .+-+|+.++|+|+.+++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 877654 23333332211 234789999999999999999999999 88999999999999999999999654333
Q ss_pred ccCCCceeeecccccccccCccccc-----cCCCCcccceeehHHHHHHHHhC-CCCCCCCCCcCCCcHHHHHHHHHhcC
Q 038707 469 VMVDQTHLTTKVQGTFGYVDPEYFQ-----SSQFTEKSDVYSFGVVLVEILTG-QKPIRAINTDEDKSLVGYFLQAINEN 542 (597)
Q Consensus 469 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlG~il~ell~g-~~p~~~~~~~~~~~~~~~~~~~~~~~ 542 (597)
. ..........|...|++||.-. +..-+...|.|.||+++++||.| ++||.+.....+.... ....+..+
T Consensus 167 ~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p--~E~~Ia~g 242 (637)
T COG4248 167 N--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNP--LETDIAHG 242 (637)
T ss_pred c--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCc--chhhhhcc
Confidence 2 2333344456889999999754 34567899999999999999995 9999886543221110 00111111
Q ss_pred chhhhhhHH------hhhhhhHHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHhhhhhhc
Q 038707 543 RLFEALDAR------VLKEAKKEEIMTVATLAKRCLNL--NGKMRPTMKEVTNELGGIRTSI 596 (597)
Q Consensus 543 ~~~~~l~~~------~~~~~~~~~~~~l~~li~~cl~~--~p~~RPt~~evl~~L~~l~~~~ 596 (597)
.....-+.+ .......-.+..+.-|..+|+.. ++.-|||++.++..|..+++++
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 111111110 01111233445677777788743 3568999999999999999876
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.98 E-value=4.5e-09 Score=98.08 Aligned_cols=126 Identities=25% Similarity=0.265 Sum_probs=84.2
Q ss_pred EEEEEEecCCcEEEEEEcccc--------------C------------hhhHHHHHHHHHHHhhcCCC--ccceeeeEEE
Q 038707 332 TVYKGMLTDGRIVAVKKSKLV--------------D------------ETNVEQFINEVVILSQINHR--NIVKLLGCCL 383 (597)
Q Consensus 332 ~Vy~~~~~~~~~vaiK~~~~~--------------~------------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 383 (597)
.||.|...+|..+|||..+.. . ........+|.+.|.++..- ++++++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 389999888999999954321 0 01134567899999999765 56777754
Q ss_pred eCCcceEEEeccC--CCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEeccCCCCCeEeCCCCcEEE
Q 038707 384 ETEVPLLVYEFIP--NGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFY-LHSAASIPIYHRDIKSANILLDDKYRAKV 460 (597)
Q Consensus 384 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~~~~i~H~Dik~~NIll~~~~~~kl 460 (597)
..-.|||||++ +..+..+.... ++.+....++.+++..+.. +|..+ |+|+||.+.|||++++ .+.|
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence 24579999998 55554433321 2234456677788885555 57888 9999999999999988 9999
Q ss_pred eecccccccc
Q 038707 461 SDFGTSRSVM 470 (597)
Q Consensus 461 ~Dfgl~~~~~ 470 (597)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999886543
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.88 E-value=5.1e-08 Score=96.51 Aligned_cols=134 Identities=16% Similarity=0.102 Sum_probs=97.6
Q ss_pred ceEEEEEEecCCcEEEEEEccccChh-----------hHHHHHHHHHHHhhcCCC--ccceeeeEEEeC-----CcceEE
Q 038707 330 QGTVYKGMLTDGRIVAVKKSKLVDET-----------NVEQFINEVVILSQINHR--NIVKLLGCCLET-----EVPLLV 391 (597)
Q Consensus 330 ~g~Vy~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-----~~~~lv 391 (597)
...|.+..+ +|+.+.||+.....-. ....+.+|...+.++... ..++++++.... ..-+||
T Consensus 35 ~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 35 GRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred CceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 344666655 5778999965432211 112477899999888533 344556665432 346799
Q ss_pred EeccCCC-ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC-------CCcEEEeec
Q 038707 392 YEFIPNG-TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD-------KYRAKVSDF 463 (597)
Q Consensus 392 ~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~-------~~~~kl~Df 463 (597)
+|++++. +|.+++.... ..+.+......++.+++..+.-||..+ |+|+|++++|||++. +..+.|+||
T Consensus 114 te~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 114 TEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred EeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 9999886 8999986432 123566778899999999999999999 999999999999975 468999999
Q ss_pred ccccc
Q 038707 464 GTSRS 468 (597)
Q Consensus 464 gl~~~ 468 (597)
+.++.
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98753
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.76 E-value=8.9e-08 Score=91.92 Aligned_cols=135 Identities=21% Similarity=0.207 Sum_probs=98.7
Q ss_pred CccCCcccccCceEEEEEEecCCcEEEEEEccccC----------------------hhhHHHHHHHHHHHhhcCCC--c
Q 038707 319 YNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVD----------------------ETNVEQFINEVVILSQINHR--N 374 (597)
Q Consensus 319 y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--n 374 (597)
..+..+||-|--+.||.|....|.++|||..+... ........+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45668999999999999999999999999543210 11234567899999999755 6
Q ss_pred cceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCC
Q 038707 375 IVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDD 454 (597)
Q Consensus 375 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~ 454 (597)
+++.+++ +.-.+|||++++-.|...- ++.+....++..|++-+..+-..| ++|+|+++-|||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 7776643 5557999999886654432 223334445555555555555677 999999999999999
Q ss_pred CCcEEEeecccccc
Q 038707 455 KYRAKVSDFGTSRS 468 (597)
Q Consensus 455 ~~~~kl~Dfgl~~~ 468 (597)
+|.+.++||-.+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999965543
No 454
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=5.1e-09 Score=111.60 Aligned_cols=151 Identities=23% Similarity=0.280 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCcee--------eecccccccccCccccc
Q 038707 422 AVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL--------TTKVQGTFGYVDPEYFQ 493 (597)
Q Consensus 422 ~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~ 493 (597)
+.+++.||.|+|...+ +||++|.|++|.++.++..||..|+.+.......... ....+....|.|||++.
T Consensus 105 l~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3456699999998764 9999999999999999999999999876544321111 11123566899999999
Q ss_pred cCCCCcccceeehHHHHHHHHhCCCCC-CCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhc
Q 038707 494 SSQFTEKSDVYSFGVVLVEILTGQKPI-RAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCL 572 (597)
Q Consensus 494 ~~~~~~~sDv~SlG~il~ell~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl 572 (597)
....+.++|+||||+++|-+..|..+. .......... + . ...+..-........++++.+=+.+++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----~-~--------~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----F-S--------RNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhh----h-h--------hcccccccccccccCcHHHHHHHHHHh
Confidence 988999999999999999999655443 3221111100 0 0 001111111223556677888899999
Q ss_pred ccCCCCCCCHHHHHH
Q 038707 573 NLNGKMRPTMKEVTN 587 (597)
Q Consensus 573 ~~~p~~RPt~~evl~ 587 (597)
..++.-||++.+++.
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877654
No 455
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.61 E-value=4e-07 Score=87.10 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHhhcCC--CccceeeeEEEeCC----cceEEEeccCCC-ChhhHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 038707 356 NVEQFINEVVILSQINH--RNIVKLLGCCLETE----VPLLVYEFIPNG-TLYQYIHNQIEEFPITWELLLRIAVEVSGA 428 (597)
Q Consensus 356 ~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~ 428 (597)
......+|...+..|.. -..++.+++..... ..+||+|++++. +|.+++..... ++......++.++++.
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARL 130 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHH
Confidence 34567888888888853 44566777766543 347999999874 79999876322 5667788999999999
Q ss_pred HHHHHhCCCCCeEeccCCCCCeEeCCCC---cEEEeeccccccc
Q 038707 429 LFYLHSAASIPIYHRDIKSANILLDDKY---RAKVSDFGTSRSV 469 (597)
Q Consensus 429 L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~Dfgl~~~~ 469 (597)
+.-||..+ |+|+|+++.|||++.+. .+.|+||+.++..
T Consensus 131 i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999 99999999999998887 8999999977653
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.47 E-value=3.9e-06 Score=78.96 Aligned_cols=139 Identities=17% Similarity=0.114 Sum_probs=103.3
Q ss_pred ccccCceEEEEEEecCCcEEEEEEccc------cChhhHHHHHHHHHHHhhcCC--CccceeeeEEEeCC----cceEEE
Q 038707 325 LGQGGQGTVYKGMLTDGRIVAVKKSKL------VDETNVEQFINEVVILSQINH--RNIVKLLGCCLETE----VPLLVY 392 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~~~~~vaiK~~~~------~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~ 392 (597)
-|+||.+.|++..+. |..+-+|+... ..+.....|.+|+..|.+|.. -.+++++..-.... .-+||.
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 366899999997764 44688887541 113356789999999999953 33555552222221 357999
Q ss_pred eccCC-CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc--EEEeecccccc
Q 038707 393 EFIPN-GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR--AKVSDFGTSRS 468 (597)
Q Consensus 393 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~--~kl~Dfgl~~~ 468 (597)
|-+++ -+|.+++.+.. ..+.+......+..++++.+.-||+.+ +.|+|+.+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97764 58888886542 224677888899999999999999999 999999999999986667 99999986654
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.47 E-value=2.5e-06 Score=82.76 Aligned_cols=132 Identities=17% Similarity=0.119 Sum_probs=85.2
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc--cceeeeEEEeCCcceEEEeccCCCC-
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRN--IVKLLGCCLETEVPLLVYEFIPNGT- 399 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gs- 399 (597)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+.+..+.+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 47899999999983 25567888876422 3455788999999986433 4677888877778889999998863
Q ss_pred hhhHHhhcCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHHhC-CCCC
Q 038707 400 LYQYIHNQIEEFPITWELLLRIAVEVSGA---------------------------------------LFYLHSA-ASIP 439 (597)
Q Consensus 400 L~~~l~~~~~~~~l~~~~~~~i~~qi~~~---------------------------------------L~~LH~~-~~~~ 439 (597)
+...+. .+......++.++++. ..+|... ....
T Consensus 82 ~~~~~~-------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 82 FSRIIS-------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred hhhhhc-------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 221111 0001111111111111 1222211 2234
Q ss_pred eEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 440 IYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 440 i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
++|+|+.|.||++++++ +.|+||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999888 9999998774
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.43 E-value=1.5e-06 Score=93.28 Aligned_cols=185 Identities=19% Similarity=0.222 Sum_probs=113.2
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChh------------------------------hH----------HHHHH
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET------------------------------NV----------EQFIN 362 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~------------------------------~~----------~~~~~ 362 (597)
+.|+.++-|.||+|++++|+.||||.....-.. .. -++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 678999999999999999999999964431110 01 12455
Q ss_pred HHHHHhhcC-----CCccceeeeEEE-eCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 038707 363 EVVILSQIN-----HRNIVKLLGCCL-ETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAA 436 (597)
Q Consensus 363 E~~~l~~l~-----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 436 (597)
|...+.+++ .+++ ++=.++. -.....|+|||++|..+.+...-.... ++.+.+.....++. +..+-..+
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~ia~~~~~~f--~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKELAELLVRAF--LRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHHHHHHHHHHH--HHHHHhcC
Confidence 666666652 2332 2222333 356778999999999998885332221 44333333222221 22222346
Q ss_pred CCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceee---------------ecccccccccCcccc---------
Q 038707 437 SIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLT---------------TKVQGTFGYVDPEYF--------- 492 (597)
Q Consensus 437 ~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~---------------~~~~gt~~y~aPE~~--------- 492 (597)
++|.|.+|.||+++.++++.+.|||+...+........ ....-..+|.+|+.-
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~ 362 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIR 362 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHH
Confidence 99999999999999999999999999877643221110 001123467776431
Q ss_pred --ccCCCCcccceeehHHHHHHHHh
Q 038707 493 --QSSQFTEKSDVYSFGVVLVEILT 515 (597)
Q Consensus 493 --~~~~~~~~sDv~SlG~il~ell~ 515 (597)
....+.....-.|+|-++.++..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (517)
T COG0661 363 AVLEPIYGKPLEEISFGEILDKLFE 387 (517)
T ss_pred HHHHhhhCCChhhccHHHHHHHHHH
Confidence 11224455566677777777765
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.35 E-value=4.1e-06 Score=79.05 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=89.8
Q ss_pred HhcCCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHH---------HHHHHHHHhhcC---CCccceeeeEE
Q 038707 315 ATDNYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQ---------FINEVVILSQIN---HRNIVKLLGCC 382 (597)
Q Consensus 315 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~l~~~~ 382 (597)
..++|...+++-......|.+-.. +|..+++|............ ..+++..+.+++ -..+..++-+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 356777777777776666666554 57889999766533222222 223344444443 23333333332
Q ss_pred E-----eCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCc
Q 038707 383 L-----ETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYR 457 (597)
Q Consensus 383 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 457 (597)
. -....+|+|||++|..|.++.. +++ .++..+++++.-||..| ++|+|.+|.|++++++ .
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-c
Confidence 2 2234568999999988876542 222 34566778899999999 9999999999999966 5
Q ss_pred EEEeecccccc
Q 038707 458 AKVSDFGTSRS 468 (597)
Q Consensus 458 ~kl~Dfgl~~~ 468 (597)
++++||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999986643
No 460
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.24 E-value=1.4e-05 Score=78.62 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=85.7
Q ss_pred ccccCc-eEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCccceeeeEEEeCCcceEEEeccCCCChhh
Q 038707 325 LGQGGQ-GTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQIN-HRNIVKLLGCCLETEVPLLVYEFIPNGTLYQ 402 (597)
Q Consensus 325 lg~G~~-g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 402 (597)
|-.|.. ..||+.... +..+.||+..... ..++.+|+++++.+. +--+++++++....+..++|||+++|.+|.+
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444544 789998764 4788888876433 345678999888884 4456678888777777899999999987764
Q ss_pred HHh-------------------hcCC-CCCCCH--HHHHHHHH--------------------HHHHHHHHHHh----CC
Q 038707 403 YIH-------------------NQIE-EFPITW--ELLLRIAV--------------------EVSGALFYLHS----AA 436 (597)
Q Consensus 403 ~l~-------------------~~~~-~~~l~~--~~~~~i~~--------------------qi~~~L~~LH~----~~ 436 (597)
... .... ..+... ........ .+...+..|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 421 1000 001110 00000000 01111222211 12
Q ss_pred CCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 437 SIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 437 ~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 2448999999999999998778999998774
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.21 E-value=1.6e-05 Score=76.00 Aligned_cols=150 Identities=21% Similarity=0.232 Sum_probs=100.6
Q ss_pred HHHHHHHhcCCccCC---cccccCceEEEEEEecCCcEEEEEEccccChh-------------------h-----HHHHH
Q 038707 309 SKDLEKATDNYNANR---ILGQGGQGTVYKGMLTDGRIVAVKKSKLVDET-------------------N-----VEQFI 361 (597)
Q Consensus 309 ~~~~~~~~~~y~~~~---~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~-------------------~-----~~~~~ 361 (597)
.+.+.....+..+.. .|..|--+.||+|...++..+|+|+.+..... . .....
T Consensus 37 ~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~ 116 (268)
T COG1718 37 LETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWAR 116 (268)
T ss_pred HHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHH
Confidence 344455555554444 46678888999999888999999975432110 0 11235
Q ss_pred HHHHHHhhcC--CCccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCC
Q 038707 362 NEVVILSQIN--HRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHS-AASI 438 (597)
Q Consensus 362 ~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~ 438 (597)
.|+..|+++. +-.+++-+.+. .-.|||||+...-+ -.-..+..++..++...+..++++.+.-|-. .+
T Consensus 117 kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~---pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~-- 187 (268)
T COG1718 117 KEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGL---PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG-- 187 (268)
T ss_pred HHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCC---CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC--
Confidence 6777787774 45555555443 34699999975311 0001112234455677788888889988887 56
Q ss_pred CeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 439 PIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 439 ~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
++|+||+.=|||+. ++.+.|+||+.|...
T Consensus 188 -LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 188 -LVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred -cccccchhhheEEE-CCeEEEEECcccccc
Confidence 99999999999999 779999999988554
No 462
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.20 E-value=2.2e-07 Score=98.27 Aligned_cols=186 Identities=18% Similarity=0.128 Sum_probs=134.9
Q ss_pred CCccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-cceeeeEEEeCCcceEEEeccC
Q 038707 318 NYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRN-IVKLLGCCLETEVPLLVYEFIP 396 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~ 396 (597)
-+...+-++++++++++|.+....+....+.+... ....-++++|.+++||| .+..++-+..++..++++++..
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence 34444567889999999987544343345544322 55667899999999999 7777777777788899999998
Q ss_pred CC-ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCce
Q 038707 397 NG-TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH 475 (597)
Q Consensus 397 ~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~ 475 (597)
.+ +...-... ....+...+...+.+.-+++|++||+.. -+|+| ||+..+ +..|..||+....+....
T Consensus 318 ~~rs~~~~~~~--se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-- 385 (829)
T KOG0576|consen 318 TGRSSALEMTV--SEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-- 385 (829)
T ss_pred CCccccccCCh--hhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc--
Confidence 76 22221111 1112445566677778889999999875 57888 777766 588999999887664332
Q ss_pred eeecccccccccCccccccCCCCcccceeehHHHHHHHHhCCCCC
Q 038707 476 LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 520 (597)
Q Consensus 476 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~ell~g~~p~ 520 (597)
......+++.++|||+...+.+..+.|+|++++-..++--|-+|-
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 344566899999999999999999999999998777777777664
No 463
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.18 E-value=8.7e-06 Score=79.16 Aligned_cols=142 Identities=23% Similarity=0.253 Sum_probs=83.9
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ccceeeeEEEeC---CcceEEEeccCC
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR--NIVKLLGCCLET---EVPLLVYEFIPN 397 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~~ 397 (597)
+.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+++++...... ...+++|+++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 578899999999999876 69999986643 4567788899999888533 356777654333 346899999999
Q ss_pred CChhh----------------HHh---hc-CCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh-
Q 038707 398 GTLYQ----------------YIH---NQ-IEEFPITWEL---------LLRI------------AVEVSG-ALFYLHS- 434 (597)
Q Consensus 398 gsL~~----------------~l~---~~-~~~~~l~~~~---------~~~i------------~~qi~~-~L~~LH~- 434 (597)
.++.. .+. .. ....+..... .... ...+.+ .+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 88877 111 11 0000011000 0000 111222 2333332
Q ss_pred ---CCCCCeEeccCCCCCeEeC-CCCcEEEeeccccc
Q 038707 435 ---AASIPIYHRDIKSANILLD-DKYRAKVSDFGTSR 467 (597)
Q Consensus 435 ---~~~~~i~H~Dik~~NIll~-~~~~~kl~Dfgl~~ 467 (597)
.....++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1334499999999999999 66666899998764
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.14 E-value=1e-05 Score=75.78 Aligned_cols=104 Identities=25% Similarity=0.330 Sum_probs=82.3
Q ss_pred HHHHHHHhhcCC-CccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 038707 361 INEVVILSQINH-RNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIP 439 (597)
Q Consensus 361 ~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 439 (597)
.+|..+++.+.+ +++++++|.|- .++|.||.+.+++......-..-...+|..+.+||.++++.+.+|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 458888888876 79999999993 3789999987766432100001123789999999999999999999865555
Q ss_pred eEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 440 IYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 440 i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
+.-.|++++|+-+++++++|++|......
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 99999999999999999999999986643
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=98.05 E-value=4.8e-05 Score=88.02 Aligned_cols=79 Identities=13% Similarity=0.283 Sum_probs=57.8
Q ss_pred CCcccccCceEEEEEEecCC---cEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCcc--ceeeeEEEeC---CcceEE
Q 038707 322 NRILGQGGQGTVYKGMLTDG---RIVAVKKSKLVD-ETNVEQFINEVVILSQIN-HRNI--VKLLGCCLET---EVPLLV 391 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~---~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 391 (597)
.+.|+.|....+|+....++ ..+++|+..... ......+.+|+++|+.+. |.++ ++++.++.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45788899999999876553 467788764322 123457889999999995 6664 7888887664 467999
Q ss_pred EeccCCCCh
Q 038707 392 YEFIPNGTL 400 (597)
Q Consensus 392 ~e~~~~gsL 400 (597)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999987654
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.03 E-value=0.00012 Score=69.12 Aligned_cols=128 Identities=23% Similarity=0.271 Sum_probs=89.9
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccC----------------hhhHHHHHHHHHHHhhcC------CCccceee
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVD----------------ETNVEQFINEVVILSQIN------HRNIVKLL 379 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l~ 379 (597)
...||+|+.-.||. +.+.....||+..... .....+..+|+.-...+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 45799999999995 4445556777765443 223455666666665555 88999999
Q ss_pred eEEEeCCcceEEEeccCC------CChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC
Q 038707 380 GCCLETEVPLLVYEFIPN------GTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD 453 (597)
Q Consensus 380 ~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~ 453 (597)
|...++..+-+|+|.+.+ -||.+++.+.. ++. ...+. +-+-..||-.++ |+.+|++|+||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-ELRQA---LDEFKRYLLDHH---IVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HHHHH---HHHHHHHHHHcC---CeecCCCcccEEEE
Confidence 999999999999998763 36888885432 554 33333 344456677777 99999999999995
Q ss_pred CCC----cEEEee
Q 038707 454 DKY----RAKVSD 462 (597)
Q Consensus 454 ~~~----~~kl~D 462 (597)
.+. .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 332 567777
No 467
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.02 E-value=4.1e-05 Score=82.09 Aligned_cols=140 Identities=17% Similarity=0.125 Sum_probs=89.4
Q ss_pred CcccccCceEEEEEEecCCcEEEEEEccccChhh-------------------------------------HHHHHHHHH
Q 038707 323 RILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETN-------------------------------------VEQFINEVV 365 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~E~~ 365 (597)
+.|+..+.|.||+|++++|+.||||.-+..-+.. .-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999644321110 012445555
Q ss_pred HHhhc----CCCc------cceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 038707 366 ILSQI----NHRN------IVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSA 435 (597)
Q Consensus 366 ~l~~l----~h~n------iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 435 (597)
...+. .|-+ |++++-. -.....|+|||++|..+.|.-.-... .++...+..-+.+...-+ |-..
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~~q--If~~ 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYLEQ--IFKT 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHHHH--HHhc
Confidence 44443 3444 3333321 24467899999999877765332111 255554444443332222 2223
Q ss_pred CCCCeEeccCCCCCeEeCC----CCcEEEeeccccccccC
Q 038707 436 ASIPIYHRDIKSANILLDD----KYRAKVSDFGTSRSVMV 471 (597)
Q Consensus 436 ~~~~i~H~Dik~~NIll~~----~~~~kl~Dfgl~~~~~~ 471 (597)
| ++|.|-+|.||+++. ++.+.+-|||+...+..
T Consensus 321 G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 G---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred C---CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 5 999999999999984 67899999999876643
No 468
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.84 E-value=0.00013 Score=66.05 Aligned_cols=128 Identities=17% Similarity=0.226 Sum_probs=87.8
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCccc-eeeeEEEeCCcceEEEeccCCC
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNIV-KLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g 398 (597)
++.+.|++|.+|.||++.+. |..+|+|.-.. +.....+..|+++|..+.-.++- +++.+- ..++.|||+.|-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~ 97 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR 97 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence 34578999999999999986 55888887653 44456788999999999866654 344442 234559999887
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCC-CCCeEeCCCCcEEEeeccccc
Q 038707 399 TLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIK-SANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 399 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik-~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.|.+.-... +. +-...++++---|...+ |-|+.|. |..++|..+..+.|+||..|+
T Consensus 98 ~L~~~~~~~------~r----k~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 98 PLGKLEIGG------DR----KHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred chhhhhhcc------cH----HHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchh
Confidence 887765421 12 22334455544555667 8899887 444444444499999999886
No 469
>PRK10593 hypothetical protein; Provisional
Probab=97.83 E-value=0.00032 Score=71.10 Aligned_cols=76 Identities=9% Similarity=0.043 Sum_probs=56.7
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC---CccceeeeEEEeC---CcceEEEecc
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINH---RNIVKLLGCCLET---EVPLLVYEFI 395 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~---~~~~lv~e~~ 395 (597)
.+.||.|..+.||+....+++ +.+|..+. ......+..|...|+.|.- ..++++++.+.+. +..+||||++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i 95 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL 95 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence 457999999999998765554 66676432 1133578899999998853 4688899887643 5689999999
Q ss_pred CCCCh
Q 038707 396 PNGTL 400 (597)
Q Consensus 396 ~~gsL 400 (597)
++.++
T Consensus 96 ~G~~~ 100 (297)
T PRK10593 96 RGVSV 100 (297)
T ss_pred CCEec
Confidence 98765
No 470
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.82 E-value=0.00015 Score=70.91 Aligned_cols=73 Identities=18% Similarity=0.225 Sum_probs=46.3
Q ss_pred CcccccCce-EEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC---ccceeeeEEEeC---CcceEEEecc
Q 038707 323 RILGQGGQG-TVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR---NIVKLLGCCLET---EVPLLVYEFI 395 (597)
Q Consensus 323 ~~lg~G~~g-~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~~ 395 (597)
+.|+.|+.. .||+. +..+++|.... ......+.+|.+++..+... -+.++++..... ...+++||++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 456766665 48875 23467776543 22345788999999888532 345555443332 2458899999
Q ss_pred CCCChh
Q 038707 396 PNGTLY 401 (597)
Q Consensus 396 ~~gsL~ 401 (597)
+|.++.
T Consensus 77 ~G~~l~ 82 (235)
T cd05155 77 EGETAT 82 (235)
T ss_pred cCCCCC
Confidence 987764
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.74 E-value=0.0002 Score=71.02 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=77.9
Q ss_pred cccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcc-ceeeeEEEeCCcceEEEeccCCCChhh
Q 038707 324 ILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHRNI-VKLLGCCLETEVPLLVYEFIPNGTLYQ 402 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL~~ 402 (597)
.+..|-...+|+.. .+++.+++|..............+|..+++.+....+ .+++... ..++||||++|.++..
T Consensus 3 ~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIE-HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEE-eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCccccc
Confidence 34567778899887 3567788887543222211235678888888864333 4444443 2479999999876542
Q ss_pred H-----------------HhhcC-CCCCCCHHH-HHHHHHH---------HHHHHHHHHhC-----CCCCeEeccCCCCC
Q 038707 403 Y-----------------IHNQI-EEFPITWEL-LLRIAVE---------VSGALFYLHSA-----ASIPIYHRDIKSAN 449 (597)
Q Consensus 403 ~-----------------l~~~~-~~~~l~~~~-~~~i~~q---------i~~~L~~LH~~-----~~~~i~H~Dik~~N 449 (597)
. ||... ...+++... +..+..+ +...+..+... ....++|+|+.|.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 11111 011122221 1111111 11222222221 12348999999999
Q ss_pred eEeCCCCcEEEeeccccc
Q 038707 450 ILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 450 Ill~~~~~~kl~Dfgl~~ 467 (597)
|++++++ +.|+||..+.
T Consensus 158 il~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred EEEeCCC-CEEEeccccC
Confidence 9999876 7899998774
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.73 E-value=0.00034 Score=68.28 Aligned_cols=74 Identities=23% Similarity=0.196 Sum_probs=47.9
Q ss_pred CcccccCceEEEEEEecC--CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-cceeeeEEEeCCcceEEEeccCCCC
Q 038707 323 RILGQGGQGTVYKGMLTD--GRIVAVKKSKLVDETNVEQFINEVVILSQINHRN-IVKLLGCCLETEVPLLVYEFIPNGT 399 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~--~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~gs 399 (597)
+.|..|-...+|+....+ ++.+++|........ .....+|+.+++.+...+ .++++.... ..++|||+++.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 457778888999988654 678889976532221 123346888888885433 444544332 248999999877
Q ss_pred hh
Q 038707 400 LY 401 (597)
Q Consensus 400 L~ 401 (597)
+.
T Consensus 79 l~ 80 (235)
T cd05157 79 LE 80 (235)
T ss_pred CC
Confidence 63
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.70 E-value=0.00051 Score=71.78 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=55.6
Q ss_pred CcccccCceEEEEEEecCC-cEEEEEEcccc-----C--hhhHHHHHHHHHHHhhcC---CCccceeeeEEEeCCcceEE
Q 038707 323 RILGQGGQGTVYKGMLTDG-RIVAVKKSKLV-----D--ETNVEQFINEVVILSQIN---HRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 323 ~~lg~G~~g~Vy~~~~~~~-~~vaiK~~~~~-----~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 391 (597)
+.||.|.+..||++...+| +.++||..... . +...+++..|.+.|..+. ..++++++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 4789999999999998876 58999974421 1 234567788888888863 3467778776 44667899
Q ss_pred EeccCCCC
Q 038707 392 YEFIPNGT 399 (597)
Q Consensus 392 ~e~~~~gs 399 (597)
||++++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 474
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.57 E-value=0.0008 Score=62.98 Aligned_cols=125 Identities=30% Similarity=0.473 Sum_probs=89.3
Q ss_pred cCCccCCcccccCc-eEEEEEEecCCcEEEEEEccc---cCh------------------hhHHHHHHHHHHHhhcC---
Q 038707 317 DNYNANRILGQGGQ-GTVYKGMLTDGRIVAVKKSKL---VDE------------------TNVEQFINEVVILSQIN--- 371 (597)
Q Consensus 317 ~~y~~~~~lg~G~~-g~Vy~~~~~~~~~vaiK~~~~---~~~------------------~~~~~~~~E~~~l~~l~--- 371 (597)
..++..+.||.|.. |.||++.. +|+.+|||..+. ... .....|..|-+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 77899999999999 99999998 477999998221 000 11235777888777774
Q ss_pred CCcc--ceeeeEEEeC-C-----------------cceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 038707 372 HRNI--VKLLGCCLET-E-----------------VPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFY 431 (597)
Q Consensus 372 h~ni--v~l~~~~~~~-~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~ 431 (597)
+.++ |+.+|+..=. + ...||.||++... .++. .-+.+|.+-|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~----~~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI----RDIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch----hHHHHHHHHHHH
Confidence 5566 8999987422 0 1247888776532 1222 345567777888
Q ss_pred HHhCCCCCeEeccCCCCCeEeCCCCcEEEeecccc
Q 038707 432 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTS 466 (597)
Q Consensus 432 LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~ 466 (597)
+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 99999 999999999986 3489999864
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.48 E-value=0.00039 Score=79.12 Aligned_cols=197 Identities=18% Similarity=0.192 Sum_probs=135.6
Q ss_pred HHHHHHHHHHhhcCCCccceeeeEEEeCCcc----eEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 038707 358 EQFINEVVILSQINHRNIVKLLGCCLETEVP----LLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLH 433 (597)
Q Consensus 358 ~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH 433 (597)
....-|+..+.++.|+|++.++.+-.+.... .+.-|++..-++...+... ..++....+.+..++..||.|+|
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v---~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV---GSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc---cccCHHHHHHHHHHHhhhHHHHH
Confidence 3344577778888999999999988765432 3445777777887777653 34888999999999999999999
Q ss_pred hCCCCCeEeccCCCC---CeEeCCCCcEEEe--eccccccccCCCceeeecccccccccCccccccCCCCc--ccceeeh
Q 038707 434 SAASIPIYHRDIKSA---NILLDDKYRAKVS--DFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTE--KSDVYSF 506 (597)
Q Consensus 434 ~~~~~~i~H~Dik~~---NIll~~~~~~kl~--Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~sDv~Sl 506 (597)
+.. ..|.-+..+ +.-.+..+.+.++ ||+.+......... ....-+..+.+||......++. ..|+|.+
T Consensus 304 ~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~--~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 304 SLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS--FSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred Hhc---cceeEEecccccccccCccceeecchhhhcccccCCCcccc--hhhcCccccccccccccccchhhhhhHHHHH
Confidence 986 656555555 5555677777777 99888766533222 1222355678888877665544 4799999
Q ss_pred HHHHHHHHhCCCCCCCCCCcCCCcHHHHHHHHHhcCchhhhhhHHhhhhhhHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 038707 507 GVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEALDARVLKEAKKEEIMTVATLAKRCLNLNGKMRPTMKEVT 586 (597)
Q Consensus 507 G~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~evl 586 (597)
|.++..+..|..+-.... . ...+++ .... ..+.+...+|+..++++|++..+++
T Consensus 379 gll~~~~~~~~~i~~~~~------~------------~~~~l~-----~~~~---~~~~d~~~~~~~~~~~~Rl~~~~ll 432 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSA------V------------PVSLLD-----VLST---SELLDALPKCLDEDSEERLSALELL 432 (1351)
T ss_pred HHHHhhhhhcCccccccc------c------------hhhhhc-----cccc---hhhhhhhhhhcchhhhhccchhhhh
Confidence 999999998775421100 0 001111 0011 1456788899999999999999988
Q ss_pred HH
Q 038707 587 NE 588 (597)
Q Consensus 587 ~~ 588 (597)
..
T Consensus 433 ~~ 434 (1351)
T KOG1035|consen 433 TH 434 (1351)
T ss_pred hc
Confidence 65
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.40 E-value=0.0043 Score=63.62 Aligned_cols=156 Identities=15% Similarity=0.200 Sum_probs=82.1
Q ss_pred CHHHHHHHhcCCcc-----CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ccceeee
Q 038707 308 TSKDLEKATDNYNA-----NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR--NIVKLLG 380 (597)
Q Consensus 308 ~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~ 380 (597)
+.+++......|.+ .+.|..|....+|+....+| .+++|+..... .+.+..|+.++..|... .+++.+.
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~ 83 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVA 83 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCccee
Confidence 34444444445544 34566777788999876555 68888765222 23334455555555321 2334332
Q ss_pred ------EEEeCCcceEEEeccCCCChhh-----------H---HhhcCCCC--------CCCH-HHHHH-----------
Q 038707 381 ------CCLETEVPLLVYEFIPNGTLYQ-----------Y---IHNQIEEF--------PITW-ELLLR----------- 420 (597)
Q Consensus 381 ------~~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~~~--------~l~~-~~~~~----------- 420 (597)
+....+..++++||++|..+.. . +|...... .+.+ .....
T Consensus 84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T PRK05231 84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQA 163 (319)
T ss_pred CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHH
Confidence 1223556789999998875421 1 11111110 0111 11111
Q ss_pred -HH-HHHHHHHHHHHhC----CCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 421 -IA-VEVSGALFYLHSA----ASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 421 -i~-~qi~~~L~~LH~~----~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.. ..+...+..+... -...++|+|+++.|||++++...-|+||+.+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 11 1111222333211 12349999999999999977556899998774
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.35 E-value=0.0023 Score=65.25 Aligned_cols=156 Identities=18% Similarity=0.259 Sum_probs=86.6
Q ss_pred HHHHHHHhcCCcc-----CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ccceeeeE
Q 038707 309 SKDLEKATDNYNA-----NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR--NIVKLLGC 381 (597)
Q Consensus 309 ~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~ 381 (597)
.+++....++|.+ .+.++.|....+|+....++ .+++|+..... ..++...|++++..|... .+++++..
T Consensus 9 ~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t 85 (307)
T TIGR00938 9 DEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKS 85 (307)
T ss_pred HHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccC
Confidence 3445444445544 34567777788998876544 57788754321 123455667777766422 23444432
Q ss_pred ------EEeCCcceEEEeccCCCChhh--------------HHhhcCCCCC---------CCHHHHH------------H
Q 038707 382 ------CLETEVPLLVYEFIPNGTLYQ--------------YIHNQIEEFP---------ITWELLL------------R 420 (597)
Q Consensus 382 ------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~~~---------l~~~~~~------------~ 420 (597)
....+..++++||++|..+.. .+|......+ -.|.... .
T Consensus 86 ~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~ 165 (307)
T TIGR00938 86 RDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAH 165 (307)
T ss_pred CCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHH
Confidence 122456789999998855421 1121111100 0111100 0
Q ss_pred HHHHHHHHHHHHHh----CCCCCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 421 IAVEVSGALFYLHS----AASIPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 421 i~~qi~~~L~~LH~----~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
....+.+.++++.. .-...++|+|+++.||++++++.+.|+||+.+.
T Consensus 166 ~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 166 MGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 11223345555543 122349999999999999988777899998774
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.34 E-value=0.0045 Score=62.68 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=84.0
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ccceeeeE------EEeCCcceEEEe
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR--NIVKLLGC------CLETEVPLLVYE 393 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~------~~~~~~~~lv~e 393 (597)
.+.|..|....+|+.... +..+++|.... ....++..|+.++..+.+. .+++++.. ....+..+++++
T Consensus 19 i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTD-SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeC-CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 345777877899998754 44688888764 2345566788888877432 24454432 123456689999
Q ss_pred ccCCCChhh----HH----------hhcCCC--------CCCCHHHHH----------HHHHHHHHHHHHHHhC----CC
Q 038707 394 FIPNGTLYQ----YI----------HNQIEE--------FPITWELLL----------RIAVEVSGALFYLHSA----AS 437 (597)
Q Consensus 394 ~~~~gsL~~----~l----------~~~~~~--------~~l~~~~~~----------~i~~qi~~~L~~LH~~----~~ 437 (597)
|++|..+.. .+ |..... ....|.... .....+..++.++... ..
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 999876532 11 111100 001111110 1112233445555531 12
Q ss_pred CCeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 438 IPIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 438 ~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
..++|+|+.|.|||++++..+.|+||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 349999999999999998777899998764
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.28 E-value=0.0016 Score=66.33 Aligned_cols=139 Identities=26% Similarity=0.349 Sum_probs=81.8
Q ss_pred cccccCceEEEEEEecC-------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-cceeeeEEEeCCcceEEEecc
Q 038707 324 ILGQGGQGTVYKGMLTD-------GRIVAVKKSKLVDETNVEQFINEVVILSQINHRN-IVKLLGCCLETEVPLLVYEFI 395 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 395 (597)
.|..|-...+|+....+ ++.+++|...... ....+..+|++++..+.... ..++++.+. -.+|+||+
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~i 79 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEFI 79 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhee
Confidence 45556667889887654 5788999865432 22345677888888885333 345555543 23689999
Q ss_pred CCCChhhH-----------------HhhcCCCC--------CCCHHHHHH--------------------------HHHH
Q 038707 396 PNGTLYQY-----------------IHNQIEEF--------PITWELLLR--------------------------IAVE 424 (597)
Q Consensus 396 ~~gsL~~~-----------------l~~~~~~~--------~l~~~~~~~--------------------------i~~q 424 (597)
+|.++... +|+..... +.-+..+.. +..+
T Consensus 80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T cd05156 80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED 159 (302)
T ss_pred CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence 88776431 11111100 000111111 1122
Q ss_pred HHHHHHHHHh------CCCCCeEeccCCCCCeEeCCC----CcEEEeeccccc
Q 038707 425 VSGALFYLHS------AASIPIYHRDIKSANILLDDK----YRAKVSDFGTSR 467 (597)
Q Consensus 425 i~~~L~~LH~------~~~~~i~H~Dik~~NIll~~~----~~~kl~Dfgl~~ 467 (597)
+...+..|.. .....++|+|+.+.|||++++ +.++|+||..+.
T Consensus 160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 2233334432 133458999999999999985 789999998874
No 480
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.03 E-value=0.004 Score=62.41 Aligned_cols=73 Identities=22% Similarity=0.251 Sum_probs=48.1
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcC---CCccceeeeEEEeCCcceEEEeccCCC
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQIN---HRNIVKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (597)
.+.|+.|....+|+.. .+++.+.||... ......|..|+.-|+.|. --.+++++++....+..+|+|||++.+
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3568888999999877 567889999866 333456777888887773 456889999988888889999999876
No 481
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.00 E-value=0.0075 Score=60.37 Aligned_cols=31 Identities=23% Similarity=0.486 Sum_probs=25.4
Q ss_pred CCeEeccCCCCCeEeCCCCc-EEEeecccccc
Q 038707 438 IPIYHRDIKSANILLDDKYR-AKVSDFGTSRS 468 (597)
Q Consensus 438 ~~i~H~Dik~~NIll~~~~~-~kl~Dfgl~~~ 468 (597)
..++|+|+++.|||+++++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 34899999999999997555 56999998753
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.91 E-value=0.01 Score=59.97 Aligned_cols=128 Identities=16% Similarity=0.218 Sum_probs=81.2
Q ss_pred EEEEEecCCcEEEEEEcc-ccChhhHHHHHHHHHHHhhcCC--CccceeeeEEEeCC--cceEEEeccCCCChhhHHhhc
Q 038707 333 VYKGMLTDGRIVAVKKSK-LVDETNVEQFINEVVILSQINH--RNIVKLLGCCLETE--VPLLVYEFIPNGTLYQYIHNQ 407 (597)
Q Consensus 333 Vy~~~~~~~~~vaiK~~~-~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~ 407 (597)
+|..... ++.+++.+.. ...........+|..+++.+.- .-+...++++.+.. .++.||+|+++..+.+.+...
T Consensus 41 t~~~~~~-~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~ 119 (321)
T COG3173 41 TFRLGDT-GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPE 119 (321)
T ss_pred eEEEecC-CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcc
Confidence 4443333 6777777332 2334455667788888888753 34455677777666 779999999885433322211
Q ss_pred CCCCCCCHHHHHHHH-HHHHHHHHHHHhCC--------------------------------------------------
Q 038707 408 IEEFPITWELLLRIA-VEVSGALFYLHSAA-------------------------------------------------- 436 (597)
Q Consensus 408 ~~~~~l~~~~~~~i~-~qi~~~L~~LH~~~-------------------------------------------------- 436 (597)
. .. .+++ ..+++.|.-||+..
T Consensus 120 ~----~~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~ 191 (321)
T COG3173 120 S----LG----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANR 191 (321)
T ss_pred c----ch----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcC
Confidence 0 01 1222 25555555555421
Q ss_pred -----CCCeEeccCCCCCeEeCCCCcEEEeeccccccc
Q 038707 437 -----SIPIYHRDIKSANILLDDKYRAKVSDFGTSRSV 469 (597)
Q Consensus 437 -----~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~ 469 (597)
...++|+|+++.||+++.+.-+=|.||+++...
T Consensus 192 p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 192 PPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred CCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 246999999999999999888999999998653
No 483
>PLN02236 choline kinase
Probab=96.89 E-value=0.0086 Score=62.02 Aligned_cols=139 Identities=21% Similarity=0.227 Sum_probs=79.0
Q ss_pred cccccCceEEEEEEecC-----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcc-ceeeeEEEeCCcceEEEeccCC
Q 038707 324 ILGQGGQGTVYKGMLTD-----GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNI-VKLLGCCLETEVPLLVYEFIPN 397 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 397 (597)
.|-.|-.-.+|+....+ ++.+++|........... -.+|+.+++.+...++ .++++.+... .|.||+++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g 117 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA 117 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence 34446667788877532 367888977654332222 3678888888864443 3456655332 58999987
Q ss_pred CChhhH-----------------HhhcC-C--CCCCCHHHHHHHHHHH-----------------HHHHHHH----Hh-C
Q 038707 398 GTLYQY-----------------IHNQI-E--EFPITWELLLRIAVEV-----------------SGALFYL----HS-A 435 (597)
Q Consensus 398 gsL~~~-----------------l~~~~-~--~~~l~~~~~~~i~~qi-----------------~~~L~~L----H~-~ 435 (597)
.+|... +|+.. . ..+..+..+.++..++ ...+..| .. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 666421 11111 0 0012233333333221 1112222 21 2
Q ss_pred CCCCeEeccCCCCCeEeCC-CCcEEEeeccccc
Q 038707 436 ASIPIYHRDIKSANILLDD-KYRAKVSDFGTSR 467 (597)
Q Consensus 436 ~~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~ 467 (597)
....++|+|+++.|||+++ ++.+.|+||..+.
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 2335899999999999986 4689999998774
No 484
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.82 E-value=0.0019 Score=64.05 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=93.2
Q ss_pred CCccCCcccccCceEEEEEEecCCcEEEEEEccccCh----------------------hhHHHHHHHHHHHhhcCC--C
Q 038707 318 NYNANRILGQGGQGTVYKGMLTDGRIVAVKKSKLVDE----------------------TNVEQFINEVVILSQINH--R 373 (597)
Q Consensus 318 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h--~ 373 (597)
-+.+.++||-|.-+-||.+...+|++.++|...+... -..-...+|+..|+.|.- =
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 3677889999999999999999999999995332100 012234578888888842 2
Q ss_pred ccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC
Q 038707 374 NIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD 453 (597)
Q Consensus 374 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~ 453 (597)
-+++.++ .+.-++|||++.+-.|...-+- .+... +...+..-+--|-.+| +||+|..-=||+++
T Consensus 173 pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~~G---lIHgDFNEFNimv~ 236 (465)
T KOG2268|consen 173 PVPKPID----HNRHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLANHG---LIHGDFNEFNIMVK 236 (465)
T ss_pred CCCCccc----ccceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHHcC---ceecccchheeEEe
Confidence 2444443 3455789999988777654321 22222 3333444455677788 99999999999999
Q ss_pred CCCcEEEeeccccc
Q 038707 454 DKYRAKVSDFGTSR 467 (597)
Q Consensus 454 ~~~~~kl~Dfgl~~ 467 (597)
++..++++||-..-
T Consensus 237 dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 237 DDDKIVVIDFPQMV 250 (465)
T ss_pred cCCCEEEeechHhh
Confidence 99999999996543
No 485
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.78 E-value=0.014 Score=59.92 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=52.2
Q ss_pred cccccCceEEEEEEecCC-cEEEEEEccc-------cChhhHHHHHHHHHHHhhcC--CC-ccceeeeEEEeCCcceEEE
Q 038707 324 ILGQGGQGTVYKGMLTDG-RIVAVKKSKL-------VDETNVEQFINEVVILSQIN--HR-NIVKLLGCCLETEVPLLVY 392 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~~-~~vaiK~~~~-------~~~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 392 (597)
.||.|....||++...+| +.|+||.... .-+...++..-|...|+... -| .+++++.+ +.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 578899999999998654 6899996332 12344566677888887763 24 45555543 555667999
Q ss_pred eccCCC-ChhhHH
Q 038707 393 EFIPNG-TLYQYI 404 (597)
Q Consensus 393 e~~~~g-sL~~~l 404 (597)
|+++.. .|.+.|
T Consensus 80 EdL~~~~ilR~~L 92 (370)
T TIGR01767 80 EDLSHHKIARKGL 92 (370)
T ss_pred hhCccchHHHHHH
Confidence 999653 344444
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.75 E-value=0.019 Score=59.97 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=53.3
Q ss_pred CCcccccCceEEEEEEecCCcEEEEEEccc----cCh---hhHHHHHHHHHHHhhcC---CCccceeeeEEEeCCcceEE
Q 038707 322 NRILGQGGQGTVYKGMLTDGRIVAVKKSKL----VDE---TNVEQFINEVVILSQIN---HRNIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~----~~~---~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 391 (597)
.+.||.|....||+.... +..++||+... ... -...+-..|...|+.+. ..++++++.++. +.-+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 457899999999998864 55699997552 111 23444555667676653 357888888776 556789
Q ss_pred EeccCC--CChhhHH
Q 038707 392 YEFIPN--GTLYQYI 404 (597)
Q Consensus 392 ~e~~~~--gsL~~~l 404 (597)
||++++ ..+.+.+
T Consensus 114 ME~L~~~~~ilr~~L 128 (418)
T PLN02756 114 MRYLEPPHIILRKGL 128 (418)
T ss_pred EeecCCcceehhhhh
Confidence 999976 3454444
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.63 E-value=0.023 Score=59.10 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=54.2
Q ss_pred CCcccccCceEEEEEEecC-CcEEEEEEccc------cChhhHHHHHHHHHHHhhcC--CC-ccceeeeEEEeCCcceEE
Q 038707 322 NRILGQGGQGTVYKGMLTD-GRIVAVKKSKL------VDETNVEQFINEVVILSQIN--HR-NIVKLLGCCLETEVPLLV 391 (597)
Q Consensus 322 ~~~lg~G~~g~Vy~~~~~~-~~~vaiK~~~~------~~~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv 391 (597)
.+.||-|.-..||++.+.+ ++.|+||.... .-+-..++..-|.+.|+... -| .+++++.+ +.+...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 3578999999999999853 67899996332 12345677777888888774 24 45556643 55566789
Q ss_pred EeccCCC-ChhhHH
Q 038707 392 YEFIPNG-TLYQYI 404 (597)
Q Consensus 392 ~e~~~~g-sL~~~l 404 (597)
||+++.. .|.+.|
T Consensus 112 MEdL~~~~ilR~~L 125 (409)
T PRK12396 112 MEDLSDHTILRTAL 125 (409)
T ss_pred HHhCcccHHHHHHH
Confidence 9998643 244443
No 488
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.62 E-value=0.00014 Score=84.24 Aligned_cols=161 Identities=14% Similarity=0.015 Sum_probs=117.1
Q ss_pred HHHHHHHHHhhcCCCccceeeeEEE--eCCcceEEEeccCCCChhhHHhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 038707 359 QFINEVVILSQINHRNIVKLLGCCL--ETEVPLLVYEFIPNGTLYQYIHNQIEEF-PITWELLLRIAVEVSGALFYLHSA 435 (597)
Q Consensus 359 ~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 435 (597)
-...|..-++...|+++.....-.. ++...+..++|+..|.+.+.|-+..++. ++....+...-.+...+..-+|+.
T Consensus 1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence 3445555666678988776554443 3346688999999999999998765443 344444444444435666665554
Q ss_pred C--CCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeecccccccccCccccccCCCCcccceeehHHHHHHH
Q 038707 436 A--SIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEI 513 (597)
Q Consensus 436 ~--~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlG~il~el 513 (597)
. ....+|+++|+.|.+|..+.++|+.++|+.+.. ...........+++.|+.|++...-.++.++|+|..|+.+|++
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk-np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIK-NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred ccCCccchhhhhhhhccceecCCccccccccccccc-CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3 234789999999999999999999999999832 2233334445578889999999888899999999999999999
Q ss_pred HhCCCCC
Q 038707 514 LTGQKPI 520 (597)
Q Consensus 514 l~g~~p~ 520 (597)
-.|..+|
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 8888775
No 489
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.40 E-value=0.029 Score=56.93 Aligned_cols=142 Identities=19% Similarity=0.211 Sum_probs=94.8
Q ss_pred ccCCcccccCceEEEEEEecCCcEEEEEEcccc-----Chh--------------------h-HHHHHHHHHHHhhcCCC
Q 038707 320 NANRILGQGGQGTVYKGMLTDGRIVAVKKSKLV-----DET--------------------N-VEQFINEVVILSQINHR 373 (597)
Q Consensus 320 ~~~~~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~-----~~~--------------------~-~~~~~~E~~~l~~l~h~ 373 (597)
++...|..|--+.||.+.-.+|..+|||+.+.. +.+ - ....-.|+.-|.+|+..
T Consensus 147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 344578899999999999999999999964421 000 0 11234577777777654
Q ss_pred ccceeeeEEEeCCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeC
Q 038707 374 NIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLD 453 (597)
Q Consensus 374 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~ 453 (597)
.|.-.--.... .-.|||+|+.... +-.-..+..+++...+..+-.|++.-+.-|.+... +||.||.-=|+|+.
T Consensus 227 GIP~PePIlLk--~hVLVM~FlGrdg---w~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVHADLSEfN~Lyh 299 (520)
T KOG2270|consen 227 GIPCPEPILLK--NHVLVMEFLGRDG---WAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCR--LVHADLSEFNLLYH 299 (520)
T ss_pred CCCCCCceeee--cceEeeeeccCCC---CcCcccccccCChHHHHHHHHHHHHHHHHHHHHhc--eeccchhhhhheEE
Confidence 43322111111 2258999996321 11111223457777888888899999988887763 99999999999996
Q ss_pred CCCcEEEeeccccccc
Q 038707 454 DKYRAKVSDFGTSRSV 469 (597)
Q Consensus 454 ~~~~~kl~Dfgl~~~~ 469 (597)
+. .+.|+|-+.+-..
T Consensus 300 dG-~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 300 DG-KLYIIDVSQSVEH 314 (520)
T ss_pred CC-EEEEEEccccccC
Confidence 65 8999998876543
No 490
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.09 E-value=0.0075 Score=63.42 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhcCCCccceeeeEEEeCC-cceEEEeccCCCChhhHHhhc
Q 038707 357 VEQFINEVVILSQINHRNIVKLLGCCLETE-VPLLVYEFIPNGTLYQYIHNQ 407 (597)
Q Consensus 357 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~ 407 (597)
..++.....+++.+.|+|+.+.+.+..... ...+|+|++ +.+|.+++..+
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~ 76 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG 76 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence 456777889999999999999998876543 467889998 67999998764
No 491
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.02 E-value=0.16 Score=51.68 Aligned_cols=28 Identities=36% Similarity=0.438 Sum_probs=24.5
Q ss_pred CeEeccCCCCCeEeCCCCcEEEeeccccc
Q 038707 439 PIYHRDIKSANILLDDKYRAKVSDFGTSR 467 (597)
Q Consensus 439 ~i~H~Dik~~NIll~~~~~~kl~Dfgl~~ 467 (597)
.++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 4899999999999988 578999998653
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.95 E-value=0.013 Score=56.16 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=21.2
Q ss_pred CeEeccCCCCCeEe-CCCCcEEEeecccccc
Q 038707 439 PIYHRDIKSANILL-DDKYRAKVSDFGTSRS 468 (597)
Q Consensus 439 ~i~H~Dik~~NIll-~~~~~~kl~Dfgl~~~ 468 (597)
.+.|+|+.+.|||+ +.++.++|+||..+..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 48999999999999 8889999999987743
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.78 E-value=0.12 Score=52.56 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=27.1
Q ss_pred CeEeccCCCCCeEeCCCCcEEEeecccccc
Q 038707 439 PIYHRDIKSANILLDDKYRAKVSDFGTSRS 468 (597)
Q Consensus 439 ~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~ 468 (597)
.++|+|+.++|||+++++.+.|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 499999999999999999999999987754
No 494
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.73 E-value=0.083 Score=54.40 Aligned_cols=139 Identities=18% Similarity=0.222 Sum_probs=76.1
Q ss_pred cccccCceEEEEEEecC----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcc-ceeeeEEEeCCcceEEEeccCCC
Q 038707 324 ILGQGGQGTVYKGMLTD----GRIVAVKKSKLVDETNVEQFINEVVILSQINHRNI-VKLLGCCLETEVPLLVYEFIPNG 398 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~----~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g 398 (597)
.|..|=.-.+|+....+ +..+++|....... ..-.-.+|..+++.+..-++ +++++++. .. +|.+|+++.
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g~ 95 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINAR 95 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcCC
Confidence 34446666788876543 23788887654322 22233578888888865554 35565552 22 589999776
Q ss_pred Chhh-------HH----------hhcC-C--CCCCCHHHHHHHHHHH----------------------HHHHHH----H
Q 038707 399 TLYQ-------YI----------HNQI-E--EFPITWELLLRIAVEV----------------------SGALFY----L 432 (597)
Q Consensus 399 sL~~-------~l----------~~~~-~--~~~l~~~~~~~i~~qi----------------------~~~L~~----L 432 (597)
+|.. .+ |... . ..+-.+..+.++..++ .+-+.. +
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 6532 11 1110 0 0011223332222221 111111 1
Q ss_pred HhCC-CCCeEeccCCCCCeEeCC-CCcEEEeeccccc
Q 038707 433 HSAA-SIPIYHRDIKSANILLDD-KYRAKVSDFGTSR 467 (597)
Q Consensus 433 H~~~-~~~i~H~Dik~~NIll~~-~~~~kl~Dfgl~~ 467 (597)
...+ ...++|+|+.+.|||+++ ++.++++||..+.
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 1111 223799999999999975 5689999998774
No 495
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.61 E-value=0.044 Score=51.71 Aligned_cols=149 Identities=17% Similarity=0.157 Sum_probs=87.3
Q ss_pred CceEEEEEEecCCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCccceeeeEEEeCCcceEEEeccCCCChhhHHhhc
Q 038707 329 GQGTVYKGMLTDGRIVAVKKSKLVDET-NVEQFINEVVILSQINHRNIVKLLGCCLETEVPLLVYEFIPNGTLYQYIHNQ 407 (597)
Q Consensus 329 ~~g~Vy~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 407 (597)
+..+.-++.-+-| +..+|++...+-. ...-|.++..+++++. .|++|..- +.-..-++.|++-.-..
T Consensus 74 gNsTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------- 141 (308)
T PF07387_consen 74 GNSTLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------- 141 (308)
T ss_pred CceEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc-------
Confidence 3444444443222 3455665544444 4566788999998874 46666522 23345688898732110
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeeccccccccCCCceeeeccccccccc
Q 038707 408 IEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYV 487 (597)
Q Consensus 408 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~ 487 (597)
+ -..++..=+.+|.-.|+... ..+|+|-.|+||+-|..|.+||.|-+..-.- . ..|.
T Consensus 142 -----~----~~N~i~agi~~L~~fH~~~~-~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~~---~----------V~~v 198 (308)
T PF07387_consen 142 -----N----FSNFITAGIKDLMDFHSENQ-HCLHGDCNPDNIMCDKFGYLKLVDPVCLLEN---Q----------VNMV 198 (308)
T ss_pred -----c----hhHHHHHhHHHHHHhhccCC-CeecCCCChhheeecCCCCEEecChhhhhhh---e----------eeEE
Confidence 1 01122222467788886543 3999999999999999999999997644211 1 1111
Q ss_pred CccccccCCCCcccceeehHHHHHHHHh
Q 038707 488 DPEYFQSSQFTEKSDVYSFGVVLVEILT 515 (597)
Q Consensus 488 aPE~~~~~~~~~~sDv~SlG~il~ell~ 515 (597)
-- .....+.++.+-+|=.-++++..
T Consensus 199 N~---~Y~~lT~~aE~~~fv~s~l~~v~ 223 (308)
T PF07387_consen 199 NI---EYESLTQEAEVKVFVKSCLKLVE 223 (308)
T ss_pred ee---eccccChHHHHHHHHHHHHHHHH
Confidence 11 12345667777777666666665
No 496
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.57 E-value=0.035 Score=56.23 Aligned_cols=74 Identities=24% Similarity=0.187 Sum_probs=57.5
Q ss_pred CCcceEEEeccCCCChhhHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeccCCCCCeEeCCCCcEEEeecc
Q 038707 385 TEVPLLVYEFIPNGTLYQYIHNQIEEFPITWELLLRIAVEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 464 (597)
Q Consensus 385 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 464 (597)
....|++|++. +++|. .+. ...++++..++.+-+..++-+...- ++=|||+...||||+ +|++.|+||-
T Consensus 298 ~~y~yl~~kdh-gt~is-~ik------~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfk 366 (488)
T COG5072 298 TLYLYLHFKDH-GTPIS-IIK------ADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFK 366 (488)
T ss_pred ceEEEEEEecC-Cceee-eee------cccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEee
Confidence 34556777765 44442 222 2568899999999988888887765 588999999999999 9999999999
Q ss_pred ccccc
Q 038707 465 TSRSV 469 (597)
Q Consensus 465 l~~~~ 469 (597)
+++.-
T Consensus 367 lsRl~ 371 (488)
T COG5072 367 LSRLS 371 (488)
T ss_pred eeecc
Confidence 99854
No 497
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.01 E-value=0.6 Score=47.78 Aligned_cols=140 Identities=21% Similarity=0.316 Sum_probs=81.2
Q ss_pred cccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcC---CCc---cceeeeEEE--eC--CcceEEEe
Q 038707 324 ILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQIN---HRN---IVKLLGCCL--ET--EVPLLVYE 393 (597)
Q Consensus 324 ~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~---h~n---iv~l~~~~~--~~--~~~~lv~e 393 (597)
.|.+ .-..+|+....+|+. ++|..... ....++..|+..|..|. .+= +..+=|-.. -. ...+-+++
T Consensus 33 ~l~s-~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~ 108 (331)
T COG2334 33 GLNS-EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE 108 (331)
T ss_pred cccc-ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence 3444 556689888877777 88887654 34456667777777773 111 222222111 12 36778999
Q ss_pred ccCCCChhh---------------HHhhcCCCC---------CCCHHH-------------HHHHHHHHHHHHHHHHhCC
Q 038707 394 FIPNGTLYQ---------------YIHNQIEEF---------PITWEL-------------LLRIAVEVSGALFYLHSAA 436 (597)
Q Consensus 394 ~~~~gsL~~---------------~l~~~~~~~---------~l~~~~-------------~~~i~~qi~~~L~~LH~~~ 436 (597)
|++|..+.. .||...++. ...|.. -.....++...+..+.+.-
T Consensus 109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 188 (331)
T COG2334 109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL 188 (331)
T ss_pred ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence 999887772 111111111 122320 1112334444444444321
Q ss_pred ----C---CCeEeccCCCCCeEeCCCCc-EEEeeccccc
Q 038707 437 ----S---IPIYHRDIKSANILLDDKYR-AKVSDFGTSR 467 (597)
Q Consensus 437 ----~---~~i~H~Dik~~NIll~~~~~-~kl~Dfgl~~ 467 (597)
. ..++|+|+.|.|||++++.. +.++||+-+.
T Consensus 189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 1 22899999999999999985 8999998764
No 498
>PF14380 WAK_assoc: Wall-associated receptor kinase C-terminal
Probab=94.98 E-value=0.036 Score=45.48 Aligned_cols=69 Identities=16% Similarity=0.274 Sum_probs=45.6
Q ss_pred CcceEEEEeccceeecccCC-ChhhhhccCCCcceeEeeeeecCCccccCCCccccccCCC-CceeccCCCCceeeecCC
Q 038707 161 RGCRSVSVVEENWVGSKYLE-NPLVLKQQARDIPALLDWGEDIGHCAEDFSLYSTTICGDG-EYRCSITFGSGYICRCRT 238 (597)
Q Consensus 161 ~~c~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~vLdW~i~~~~C~~~~~~~~~~~C~s~-~~c~~~~~~~gy~C~C~~ 238 (597)
..|...+.|+.......... ...-+.+ ....+++|+|.+..+.|. +|..+ +.|....+..-+.|.|++
T Consensus 23 ~~C~~~v~vPV~~~~~~~~~~~~~~~~~-~L~~GF~L~w~~~~~~C~---------~C~~SgG~Cgy~~~~~~f~C~C~d 92 (94)
T PF14380_consen 23 GSCQKSVVVPVLGSAVDSIDGSSGNYEE-VLKKGFELEWNADSGDCR---------ECEASGGRCGYDSNSEQFTCFCSD 92 (94)
T ss_pred CcCCEEEEEEECchhhhccccchhHHHH-HHhcCcEEEEeCCCCcCc---------ChhcCCCEeCCCCCCceEEEECCC
Confidence 56988776665543211111 1111122 234699999998778998 88876 889877777789999997
Q ss_pred C
Q 038707 239 T 239 (597)
Q Consensus 239 g 239 (597)
|
T Consensus 93 g 93 (94)
T PF14380_consen 93 G 93 (94)
T ss_pred C
Confidence 5
No 499
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.95 E-value=0.36 Score=46.06 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=50.7
Q ss_pred ccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhc---CCCccceeeeEEEeCCcceEEEeccCCCChh
Q 038707 325 LGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQI---NHRNIVKLLGCCLETEVPLLVYEFIPNGTLY 401 (597)
Q Consensus 325 lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 401 (597)
+.-|.--..|...+ +..++-||.-. ......|..|+.-|..| +.-++.+++.+-.+.+..||||||++-+.+.
T Consensus 24 v~gG~inea~~v~d-g~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 24 VSGGDINEAWRLRD-GTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred cCCccccceeEeec-CCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 44344444444332 45678888654 34456677777766666 4567889999999999999999999987666
No 500
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.71 E-value=0.64 Score=47.71 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=52.6
Q ss_pred ccCHHHHHHHhcCCccC---C-cccccCceEEEEEEecCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ccceee
Q 038707 306 LFTSKDLEKATDNYNAN---R-ILGQGGQGTVYKGMLTDGRIVAVKKSKLVDETNVEQFINEVVILSQINHR--NIVKLL 379 (597)
Q Consensus 306 ~~~~~~~~~~~~~y~~~---~-~lg~G~~g~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~ 379 (597)
.++.+.+..+...+-+. + ..=.+.-..||+....++..+++|..... .-...++..|+..+..|... .++...
T Consensus 10 ~l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~-~~~~~~i~~E~~~l~~L~~~gipv~~p~ 88 (325)
T PRK11768 10 TLTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDGRRVVAKFYRPE-RWSDAQILEEHAFALELAEAEIPVVAPL 88 (325)
T ss_pred CCChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCCCEEEEEEcCcc-cCCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 34455555554444331 1 11234456799988877888999986532 22345666777777766321 122211
Q ss_pred ---e--EEEeCCcceEEEeccCCCCh
Q 038707 380 ---G--CCLETEVPLLVYEFIPNGTL 400 (597)
Q Consensus 380 ---~--~~~~~~~~~lv~e~~~~gsL 400 (597)
| ....++..+.++++++|...
T Consensus 89 ~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 89 AFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 1 12234567789999987643
Done!