BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038714
MASSSSLAPLTVTKEQFKTFHNIDRILFTKLVHYLGRNSIESMQVIALWIWLEHSGLCRD
LVNTLLTWPDTLITSLADEAVLCLSCIQSDESFPFSLQNIEVIPLTQSITKSRVSLSFFR
DNRLKILHAVTKNVIEVCARAFEDLVLHEVQNKAIIRDQNAENSLRGNENMVKQQLSDYG
PIVPVMSYYDAVVQRQHDVLRNEVDEMWRRMQISSSNSDEKGNHDYQVTVPPDERTIFLT
FSKGYPISENEIRDFFIRKFGECFEAINMQEVASSTEQPLFARLVMDSASFMDVVLGGKS
KAKFSINGKHKIIQILKNN

High Scoring Gene Products

Symbol, full name Information P value
AT5G13620 protein from Arabidopsis thaliana 1.1e-40
AT1G49290 protein from Arabidopsis thaliana 1.8e-39
AT1G64870 protein from Arabidopsis thaliana 1.7e-33
AT5G11220 protein from Arabidopsis thaliana 1.5e-22
AT3G45200 protein from Arabidopsis thaliana 2.3e-13
AT5G24355 protein from Arabidopsis thaliana 2.5e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038714
        (319 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2173224 - symbol:AT5G13620 "AT5G13620" species...   255  1.1e-40   2
TAIR|locus:2010277 - symbol:AT1G49290 "AT1G49290" species...   421  1.8e-39   1
TAIR|locus:2010881 - symbol:AT1G64870 "AT1G64870" species...   216  1.7e-33   2
TAIR|locus:2147942 - symbol:AT5G11220 "AT5G11220" species...   164  1.5e-22   2
TAIR|locus:2096890 - symbol:AT3G45200 "AT3G45200" species...   192  2.3e-13   1
TAIR|locus:504954994 - symbol:AT5G24355 "AT5G24355" speci...   133  2.5e-08   1


>TAIR|locus:2173224 [details] [associations]
            symbol:AT5G13620 "AT5G13620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB006704
            IPI:IPI00523001 RefSeq:NP_196866.1 UniGene:At.54837
            ProteinModelPortal:Q9FNB1 EnsemblPlants:AT5G13620.1 GeneID:831206
            KEGG:ath:AT5G13620 TAIR:At5g13620 eggNOG:NOG309605
            HOGENOM:HOG000090873 InParanoid:Q9FNB1 OMA:PAFEDIC PhylomeDB:Q9FNB1
            ProtClustDB:CLSN2682474 Genevestigator:Q9FNB1 Uniprot:Q9FNB1
        Length = 301

 Score = 255 (94.8 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 59/160 (36%), Positives = 96/160 (60%)

Query:     1 MASSSSLAPLTVTKEQFKTFHNIDRILFTKLVHYLGRNSIESMQVIALWIWLEHSGLCRD 60
             MASSSS   + VT+++F  FH  DR LF + V  L R+  +S+QV++  ++LE SGL  +
Sbjct:     1 MASSSSA--VAVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSGLVSN 58

Query:    61 LVNTLLTWPDTLITSLADEAVLCLSCIQSDESFPFSLQNI--EVIPLTQSITKSRVSLSF 118
             L+    + PD  I ++ADE V+CLSC+ S E+F   + N   ++IPL   +T   ++L+ 
Sbjct:    59 LIVNFNSLPDFFINTVADEVVMCLSCL-SYENFSMFVANFGKKIIPLITRMTGEYLTLAV 117

Query:   119 FRDNRLKILHAVTKNVIEVCARAFEDLVLHEVQNKAIIRD 158
                NR  IL  + K++  +C  AFED+ + + + + +I D
Sbjct:   118 IHQNRESILLDMKKHLTSICYPAFEDICV-QAEKEKVIED 156

 Score = 194 (73.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 38/79 (48%), Positives = 56/79 (70%)

Query:   233 DERTIFLTFSKGYPISENEIRDFFIRKFGECFEAINMQEVASSTEQPLFARLVMDSASFM 292
             D+RT+FLTFS+GYP+SE E+  +F R+FGE  EAI M       EQ L+A++V+ SA+ +
Sbjct:   200 DDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPG-GEGNEQALYAKMVLHSAAMI 258

Query:   293 -DVVLGGKSKAKFSINGKH 310
              ++V  G  + K++INGKH
Sbjct:   259 PEIVSDGIERNKYTINGKH 277

 Score = 40 (19.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query:    10 LTVTKEQFKTFHNIDRILFTKLVHYLGRNS 39
             + V  E+ K   ++  + F+K VH  G +S
Sbjct:   144 ICVQAEKEKVIEDMKHLGFSKAVHKAGSSS 173


>TAIR|locus:2010277 [details] [associations]
            symbol:AT1G49290 "AT1G49290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009860 "pollen tube growth" evidence=RCA]
            [GO:0030048 "actin filament-based movement" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007504
            HOGENOM:HOG000090873 ProtClustDB:CLSN2682474 EMBL:DQ459168
            IPI:IPI00544154 PIR:B96529 RefSeq:NP_175354.1 UniGene:At.65995
            ProteinModelPortal:Q9XI97 SMR:Q9XI97 PRIDE:Q9XI97
            EnsemblPlants:AT1G49290.1 GeneID:841352 KEGG:ath:AT1G49290
            TAIR:At1g49290 eggNOG:NOG259559 InParanoid:Q9XI97 OMA:EANEQPL
            PhylomeDB:Q9XI97 Genevestigator:Q9XI97 Uniprot:Q9XI97
        Length = 338

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 105/318 (33%), Positives = 179/318 (56%)

Query:     4 SSSLAPLTVTKEQFKTFHNIDRILFTKLVHYLGRNSIESMQVIALWIWLEHSGLCRDLVN 63
             ++ L+ + VT+++F  FH IDR LF++LV  L R+  +S   +   ++LE S   RD++ 
Sbjct:    11 NNPLSSIVVTRDEFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLEQSSYARDIIA 70

Query:    64 TLLTWPDTLITSLADEAVLCLSCIQSDE--SFPFSLQNIE--VIPLTQSITKSRVSLSFF 119
              L++ P+  + ++A+E  +C++ + + E  S  F+  N +  +IPL   IT  + +L   
Sbjct:    71 YLVSLPNAFVDAVANEIGVCINLLYNVEFASTFFAADNDDNSMIPLLLRITGGKFTLRLI 130

Query:   120 RDNRLKILHAVTKNVIEVCARAFEDL--VLHEVQNK---AIIRDQNAENSLRGNENMVKQ 174
                R      VTK+  +VC RAF DL    H +  +   A+ R++  E+ ++     ++Q
Sbjct:   131 NQQRKNFCAGVTKSWTDVCTRAFSDLCETAHRINREKQLALEREKFIED-MKKLRLSLQQ 189

Query:   175 QLSDYGPIVPVMSYYDAVVQRQHDVLRNEVDEMWRRMQISSSNSDEKGNHDYQVTVPPDE 234
             + S+   +  V         R H  + +E ++  R  + +    +++G       +  D+
Sbjct:   190 EKSNRLSVQQV-KIASPPPPRPHPPVEDETEKALREKE-TMEVKEKEG------VLAADD 241

Query:   235 RTIFLTFSKGYPISENEIRDFFIRKFGECFEAINMQEVASSTEQPLFARLVM--DSASFM 292
             RT+FLTFSKGYPISE E+R +F R+FGE  EA+ MQEV ++ EQPLFA++VM    AS M
Sbjct:   242 RTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEAN-EQPLFAKMVMKLQCASMM 300

Query:   293 DVVLGGKSKAKFSINGKH 310
             D ++  + + KF+I+GKH
Sbjct:   301 DEIVSARFRNKFTIDGKH 318


>TAIR|locus:2010881 [details] [associations]
            symbol:AT1G64870 "AT1G64870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC006193 ProtClustDB:CLSN2679345
            EMBL:DQ446395 IPI:IPI00517656 PIR:A96672 RefSeq:NP_176667.1
            UniGene:At.66101 ProteinModelPortal:Q9XIQ9
            EnsemblPlants:AT1G64870.1 GeneID:842795 KEGG:ath:AT1G64870
            TAIR:At1g64870 InParanoid:Q9XIQ9 OMA:AKFRING PhylomeDB:Q9XIQ9
            Genevestigator:Q9XIQ9 Uniprot:Q9XIQ9
        Length = 304

 Score = 216 (81.1 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 46/134 (34%), Positives = 75/134 (55%)

Query:    13 TKEQFKTFHNIDRILFTKLVHYLGRNSIESMQVIALWIWLEHSGLCRDLVNTLLTWPDTL 72
             T EQ   FH  +R +F+KLV  L R   ES+ V+A W+W E  G   ++ + +  + D L
Sbjct:     5 TVEQLHAFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFGF-GNIFSIITVFSDLL 63

Query:    73 ITSLADEAVLCLSCIQSDESFPFSLQNIEVIPLTQSITKSRVSLSFFRDNRLKILHAVTK 132
             I  LA+EAVLC  C++SD+  P    ++  IPLT+   K+ +SL    ++R   +  +  
Sbjct:    64 IVDLANEAVLCFRCLESDQP-P---NDVSQIPLTERFMKNDISLQIIHNHRYTAITGIKN 119

Query:   133 NVIEVCARAFEDLV 146
              +  +C+R F D++
Sbjct:   120 FLTTICSRIFSDIL 133

 Score = 182 (69.1 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 40/98 (40%), Positives = 59/98 (60%)

Query:   234 ERTIFLTFSKGYPISENEIRDFFIRKFGE-CFEAINMQEVASST-----------EQPLF 281
             ERT+FLTFS+G+P+S  E+   F   +GE C E++ M E   ++           +QPLF
Sbjct:   202 ERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMPEDGGNSSNDNTNCNGHQQQPLF 261

Query:   282 ARLVMDSASFMDVVLGGKSKAKFSINGKHKIIQILKNN 319
             A++V+DS   +D +L G+ K K+ INGKH   +  KNN
Sbjct:   262 AKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNN 299


>TAIR|locus:2147942 [details] [associations]
            symbol:AT5G11220 "AT5G11220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL360314 IPI:IPI00538574
            RefSeq:NP_196683.1 UniGene:At.43617 ProteinModelPortal:Q9LFN4
            EnsemblPlants:AT5G11220.1 GeneID:830992 KEGG:ath:AT5G11220
            TAIR:At5g11220 HOGENOM:HOG000153012 InParanoid:Q9LFN4 OMA:HRYSAIA
            PhylomeDB:Q9LFN4 ProtClustDB:CLSN2679345 Genevestigator:Q9LFN4
            Uniprot:Q9LFN4
        Length = 265

 Score = 164 (62.8 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
 Identities = 34/89 (38%), Positives = 57/89 (64%)

Query:   233 DERTIFLTFSKGYPISENEIRDFFIRKFGE-CFEAINMQEVASS----------TEQPLF 281
             +ERT+F+TFS+G+P+S+ E++ FF + +GE C E + M+E   +           +Q LF
Sbjct:   165 NERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQSLF 224

Query:   282 ARLVMDSASFMDVVLGGKSKAKFSINGKH 310
             A+LV++S + +D +L G+   +F  NGKH
Sbjct:   225 AKLVLNSVATVDRILDGEKIKRFKSNGKH 253

 Score = 151 (58.2 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query:    46 IALWIWLEHSGLCRDLVNTLLTWPDTLITSLADEAVLCLSCIQSDESFPFSLQNIEVIPL 105
             +A W WLE     +++++T+L   D +I +LA+EAVLC  C+ S E  P    +   IPL
Sbjct:     1 MATWFWLEDF-FSQNILSTILALSDPVIMALANEAVLCFQCLDSAEQ-P---NDFNQIPL 55

Query:   106 TQSITKSRVSLSFFRDNRLKILHAVTKNVIEVCARAFEDLV 146
             T  +    +SL  F  +R   +  +   +  VC+R F D++
Sbjct:    56 TAELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSDIL 96


>TAIR|locus:2096890 [details] [associations]
            symbol:AT3G45200 "AT3G45200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL138649 ProtClustDB:CLSN2679345
            EMBL:DQ446735 IPI:IPI00519223 PIR:T47460 RefSeq:NP_190106.1
            UniGene:At.65244 PRIDE:Q9M1T9 EnsemblPlants:AT3G45200.1
            GeneID:823656 KEGG:ath:AT3G45200 TAIR:At3g45200 InParanoid:Q9M1T9
            OMA:CIATEND PhylomeDB:Q9M1T9 Genevestigator:Q9M1T9 Uniprot:Q9M1T9
        Length = 300

 Score = 192 (72.6 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 48/135 (35%), Positives = 67/135 (49%)

Query:    15 EQFKTFHNIDRILFTKLVHYLGRNSIESMQVIALWIWLEHSGLCRDLVNTLLTWPDTLIT 74
             ++   FH  DR +F+KLV    R   ES+ V+A W+WLE  G   ++ + +LT  D LI 
Sbjct:     7 QELHVFHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGF-ENIFSIILTLTDPLIA 65

Query:    75 SLADEAVLCLSCIQSDESFPFSLQNIEV--IPLTQSITKSRVSLSFFRDNRLKILHAVTK 132
              LA EAV C  C+        SL N  +  IPLT    K  +SL     NR   +  +  
Sbjct:    66 GLAYEAVSCFQCL--------SLNNPPIGRIPLTTKYLKKNISLQMIYKNRYSAITGIKN 117

Query:   133 NVIEVCARAFEDLVL 147
              +  VC R F D++L
Sbjct:   118 FLTTVCTRIFTDILL 132

 Score = 189 (71.6 bits), Expect = 5.5e-13, P = 5.5e-13
 Identities = 73/260 (28%), Positives = 121/260 (46%)

Query:    71 TLITSLADEAVLCLSCIQSDESFP-FSLQNIEV--IPLTQSITKSRVSLSFFRDNRLKIL 127
             ++I +L D  +  L+  ++   F   SL N  +  IPLT    K  +SL     NR   +
Sbjct:    54 SIILTLTDPLIAGLA-YEAVSCFQCLSLNNPPIGRIPLTTKYLKKNISLQMIYKNRYSAI 112

Query:   128 HAVTKNVIEVCARAFEDLVLHEVQNKAIIRDQNAENSLRGNENMVKQQLSDYGPIVPVMS 187
               +   +  VC R F D++L  +            +S+   +  ++Q L   G   P+  
Sbjct:   113 TGIKNFLTTVCTRIFTDILLRVLP----------PSSMSSFDARLRQPLQIPGFPHPI-- 160

Query:   188 YYDAVVQRQHDVLRNEVDEMWRRMQISSSNSD----EKGNHDYQVT--VPPDERTIFLTF 241
              + ++     +V+ NEVD    R   S+ N++      G   +        ++RT+FLTF
Sbjct:   161 -FGSI-----NVMPNEVD----RDNFSNKNNNLFFIPNGLWGWNANCIATENDRTLFLTF 210

Query:   242 SKGYPISENEIRDFFIRKFGE-CFEAINMQEV----------ASSTEQPLFARLVMDSAS 290
             S+GYP++  EI + F +++GE C E + MQ             S  +Q LFARLV+DS +
Sbjct:   211 SRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNANANRSCEQQSLFARLVLDSVT 270

Query:   291 FMDVVLGGKSKAKFSINGKH 310
              +D VL  + K +  I GK+
Sbjct:   271 TVDRVLDDEQKKELMIYGKN 290


>TAIR|locus:504954994 [details] [associations]
            symbol:AT5G24355 "AT5G24355" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016884
            IPI:IPI00520727 RefSeq:NP_680216.1 UniGene:At.65546
            EnsemblPlants:AT5G24355.1 GeneID:832506 KEGG:ath:AT5G24355
            TAIR:At5g24355 eggNOG:NOG311284 HOGENOM:HOG000131647 OMA:ANERTLY
            PhylomeDB:Q3E970 ProtClustDB:CLSN2917835 Genevestigator:Q3E970
            Uniprot:Q3E970
        Length = 113

 Score = 133 (51.9 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 29/66 (43%), Positives = 45/66 (68%)

Query:   233 DERTIFLTFSKGYPISENE-IRDFFIRKFGE-CFEAINMQEVASSTEQPLFARLVMDSAS 290
             +ERT+++TF +G P+S+ E I+  F  ++GE C + I+MQ      EQ LFA+LV+DS +
Sbjct:    16 NERTLYITFPRGVPMSQEEVIKQCFTEQYGENCVQGIDMQH-DDGQEQALFAKLVLDSVA 74

Query:   291 FMDVVL 296
              M+ VL
Sbjct:    75 TMNRVL 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      319       319   0.00084  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  216 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.80u 0.12s 26.92t   Elapsed:  00:00:01
  Total cpu time:  26.80u 0.12s 26.92t   Elapsed:  00:00:02
  Start:  Mon May 20 22:26:42 2013   End:  Mon May 20 22:26:44 2013

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