BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038717
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBM4|ISAM1_ARATH Iron-sulfur assembly protein IscA-like 1, mitochondrial
OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2
Length = 137
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
Query: 1 QRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDF 60
QRQ+P+L+LGVKARGCNGLSYTLNYADE+ KFDELVE+KGV+IL++PKALMHVIGTKMDF
Sbjct: 39 QRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDF 98
Query: 61 VDDKLRSEFVFINPNSKGQCGCGESFMTTSSSGASKQGGS 100
VDDKLRSEFVFINPNS+GQCGCGESFMTTS+S A KQ S
Sbjct: 99 VDDKLRSEFVFINPNSQGQCGCGESFMTTSTSSA-KQSAS 137
>sp|Q8L8C0|ISAM3_ARATH Iron-sulfur assembly protein IscA-like 3, mitochondrial
OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2
Length = 109
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 81/89 (91%), Gaps = 1/89 (1%)
Query: 1 QRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDF 60
+Q+P+L+L V+A+GCNGLSY LNYA E+ KFDE+VE+KGVKIL+DPKA+MHVIGT+MDF
Sbjct: 22 HQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVDPKAVMHVIGTEMDF 81
Query: 61 VDDKLRSEFVFINPNSKGQCGCGESFMTT 89
VDDKLRSEFVF+NPN+ +CGCGESF TT
Sbjct: 82 VDDKLRSEFVFVNPNAT-KCGCGESFTTT 109
>sp|Q07821|ISA1_YEAST Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ISA1 PE=1 SV=1
Length = 250
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 1 QRQRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDF 60
Q + +++ + RGC+GL+Y L Y E KFDE+VE GVKI+ID KAL +IG++MD+
Sbjct: 163 QPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDGVKIVIDSKALFSIIGSEMDW 222
Query: 61 VDDKLRSEFVFINPNSKGQCGCGESFMT 88
+DDKL S+FVF NPNSKG CGCGESFM
Sbjct: 223 IDDKLASKFVFKNPNSKGTCGCGESFMV 250
>sp|Q54VS1|ISCA1_DICDI Iron-sulfur cluster assembly 1 homolog, mitochondrial
OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1
Length = 139
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDE-LVEDKGVKILIDPKALMHVIGTKMDFVDDKL 65
L+LG+K RGC+G+SYTL++A ++ KFDE +V DK + I++D KAL+ VIGT+MD++++ +
Sbjct: 43 LRLGIKERGCSGMSYTLDFATQKNKFDETVVADKDINIIVDSKALLSVIGTEMDYIEEPI 102
Query: 66 RSEFVFINPNSKGQCGCGESFMT 88
+ EF+FINPN+ CGCGESF T
Sbjct: 103 KKEFIFINPNATNTCGCGESFTT 125
>sp|Q9ZD62|Y484_RICPR Uncharacterized protein RP484 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP484 PE=3 SV=1
Length = 110
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Query: 1 QRQRPY--LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKM 58
+R +P +++G+K+ GC G +Y + YAD + +FDE+VE+KGV+ILIDPK LM+++G++M
Sbjct: 21 KRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQFDEVVEEKGVRILIDPKTLMYILGSEM 80
Query: 59 DFVDDKLRSEFVFINPNSKGQCGCGESF 86
D+V+ +S+F F NPN K CGCG+SF
Sbjct: 81 DYVETNFKSQFTFTNPNEKANCGCGKSF 108
>sp|Q5ZJ74|ISCA1_CHICK Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Gallus
gallus GN=ISCA1 PE=2 SV=1
Length = 129
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
+K+GV+ RGCNGLSYTL Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 VKVGVRTRGCNGLSYTLEYTKSKGDSDEEVVQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q4QRC6|ISCA1_DANRE Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Danio
rerio GN=isca1 PE=2 SV=1
Length = 129
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
LK+GV+ RGCNGL+YTL+Y + + DE V GV++ I+ KA + ++GT+MDFV+ KL
Sbjct: 48 LKVGVRTRGCNGLTYTLDYTKNKEQSDEEVLQDGVRVFIEKKAQLTLLGTEMDFVETKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q4R5F0|ISCA1_MACFA Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Macaca
fascicularis GN=ISCA1 PE=2 SV=1
Length = 129
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
+K+GV+ RGCNGLSYTL Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 VKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q9BUE6|ISCA1_HUMAN Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo
sapiens GN=ISCA1 PE=2 SV=1
Length = 129
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
+K+GV+ RGCNGLSYTL Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 VKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q3SZG8|ISCA1_BOVIN Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Bos taurus
GN=ISCA1 PE=2 SV=1
Length = 129
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
+K+GV+ RGCNGLSYTL Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 VKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q80W96|ISCA1_RAT Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Rattus
norvegicus GN=Isca1 PE=2 SV=1
Length = 129
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
LK+GV+ RGCNGLSY+L Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 LKVGVRTRGCNGLSYSLEYTKTKGDADEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|Q9D924|ISCA1_MOUSE Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Mus
musculus GN=Isca1 PE=2 SV=1
Length = 129
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
LK+GV+ RGCNGLSY+L Y + DE V GV++ I+ KA + ++GT+MD+V+DKL
Sbjct: 48 LKVGVRTRGCNGLSYSLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLS 107
Query: 67 SEFVFINPNSKGQCGCGESF 86
SEFVF NPN KG CGCGESF
Sbjct: 108 SEFVFNNPNIKGTCGCGESF 127
>sp|P78859|ISA1_SCHPO Iron-sulfur assembly protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=isa1 PE=2 SV=1
Length = 190
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L++GVK +GC G +Y+L Y ++ KFDE+V+ G+ I++ +AL+ +IG+ MD+ DD L+
Sbjct: 107 LRIGVKQKGCAGQAYSLEYIEKPDKFDEIVKQDGISIIVARRALLQIIGSVMDYRDDDLQ 166
Query: 67 SEFVFINPNSKGQCGCGESFMT 88
S F+F NPN K CGCGESF T
Sbjct: 167 SRFIFSNPNVKSTCGCGESFST 188
>sp|B5XNJ9|ISCA_KLEP3 Iron-binding protein IscA OS=Klebsiella pneumoniae (strain 342)
GN=iscA PE=3 SV=1
Length = 107
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 57/80 (71%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPAAEDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|A4WDA9|ISCA_ENT38 Iron-binding protein IscA OS=Enterobacter sp. (strain 638) GN=iscA
PE=3 SV=1
Length = 107
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 QRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMD 59
R + Y L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++D
Sbjct: 19 NRGKGYGLRLGVRTSGCSGMAYVLEFVDEPATDDTVFEDKGVKVVIDGKSLQFLDGTQLD 78
Query: 60 FVDDKLRSEFVFINPNSKGQCGCGESF 86
FV + L F F NPN K +CGCGESF
Sbjct: 79 FVKEGLNEGFKFTNPNVKDECGCGESF 105
>sp|A6TCE9|ISCA_KLEP7 Iron-binding protein IscA OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=iscA PE=3
SV=1
Length = 107
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 57/80 (71%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPAAEDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|C6DBI9|ISCA_PECCP Iron-binding protein IscA OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=iscA PE=3 SV=1
Length = 107
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + D+ D + EDKG+K+++D K+L+++ GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDDLNDGDTVFEDKGIKVIVDGKSLVYLDGTELDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPNS G+CGCGESF
Sbjct: 86 EGFKFNNPNSSGECGCGESF 105
>sp|Q6D261|ISCA_ERWCT Iron-binding protein IscA OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=iscA PE=3 SV=1
Length = 107
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + D+ D + EDKGVK+++D K+L+++ GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDDLNDGDTVFEDKGVKVIVDGKSLVYLDGTELDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN G+CGCGESF
Sbjct: 86 EGFKFNNPNISGECGCGESF 105
>sp|Q7CQ12|ISCA_SALTY Iron-binding protein IscA OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|Q8XFZ8|ISCA_SALTI Iron-binding protein IscA OS=Salmonella typhi GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B4TRX3|ISCA_SALSV Iron-binding protein IscA OS=Salmonella schwarzengrund (strain
CVM19633) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B5BAW8|ISCA_SALPK Iron-binding protein IscA OS=Salmonella paratyphi A (strain
AKU_12601) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|C0PYK9|ISCA_SALPC Iron-binding protein IscA OS=Salmonella paratyphi C (strain
RKS4594) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|A9N1X7|ISCA_SALPB Iron-binding protein IscA OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|Q5PNG5|ISCA_SALPA Iron-binding protein IscA OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B4TDB4|ISCA_SALHS Iron-binding protein IscA OS=Salmonella heidelberg (strain SL476)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B5RD10|ISCA_SALG2 Iron-binding protein IscA OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B5R5A0|ISCA_SALEP Iron-binding protein IscA OS=Salmonella enteritidis PT4 (strain
P125109) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B5FR83|ISCA_SALDC Iron-binding protein IscA OS=Salmonella dublin (strain CT_02021853)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|Q57LH1|ISCA_SALCH Iron-binding protein IscA OS=Salmonella choleraesuis (strain
SC-B67) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|A9MHJ6|ISCA_SALAR Iron-binding protein IscA OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|B5F1B8|ISCA_SALA4 Iron-binding protein IscA OS=Salmonella agona (strain SL483)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFSNPNVKDECGCGESF 105
>sp|Q8GLE6|ISCA_XENNA Iron-binding protein IscA OS=Xenorhabdus nematophila (strain ATCC
19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) GN=iscA
PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 59/80 (73%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L +AD + D++ EDKGVK+++D K+++++ GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFADVVNEEDQVFEDKGVKVIVDGKSILYLDGTELDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN +CGCGESF
Sbjct: 86 EGFKFNNPNVSSECGCGESF 105
>sp|Q3YZ24|ISCA_SHISS Iron-binding protein IscA OS=Shigella sonnei (strain Ss046) GN=iscA
PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|P0AAD1|ISCA_SHIFL Iron-binding protein IscA OS=Shigella flexneri GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|Q32D36|ISCA_SHIDS Iron-binding protein IscA OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|Q31XW2|ISCA_SHIBS Iron-binding protein IscA OS=Shigella boydii serotype 4 (strain
Sb227) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B7LKB1|ISCA_ESCF3 Iron-binding protein IscA OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B1LNI4|ISCA_ECOSM Iron-binding protein IscA OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B6I5A0|ISCA_ECOSE Iron-binding protein IscA OS=Escherichia coli (strain SE11) GN=iscA
PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B7N6B5|ISCA_ECOLU Iron-binding protein IscA OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|P0AAC8|ISCA_ECOLI Iron-binding protein IscA OS=Escherichia coli (strain K12) GN=iscA
PE=1 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B1IWD3|ISCA_ECOLC Iron-binding protein IscA OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|P0AAC9|ISCA_ECOL6 Iron-binding protein IscA OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|Q0TEV7|ISCA_ECOL5 Iron-binding protein IscA OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|A1AE65|ISCA_ECOK1 Iron-binding protein IscA OS=Escherichia coli O1:K1 / APEC GN=iscA
PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B1XB03|ISCA_ECODH Iron-binding protein IscA OS=Escherichia coli (strain K12 / DH10B)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|C4ZXA3|ISCA_ECOBW Iron-binding protein IscA OS=Escherichia coli (strain K12 / MC4100
/ BW2952) GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B7M7N1|ISCA_ECO8A Iron-binding protein IscA OS=Escherichia coli O8 (strain IAI1)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
>sp|B7MYG2|ISCA_ECO81 Iron-binding protein IscA OS=Escherichia coli O81 (strain ED1a)
GN=iscA PE=3 SV=1
Length = 107
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 7 LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLR 66
L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L
Sbjct: 26 LRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLN 85
Query: 67 SEFVFINPNSKGQCGCGESF 86
F F NPN K +CGCGESF
Sbjct: 86 EGFKFTNPNVKDECGCGESF 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,952,855
Number of Sequences: 539616
Number of extensions: 1405661
Number of successful extensions: 4097
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3708
Number of HSP's gapped (non-prelim): 379
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)