Query 038717
Match_columns 100
No_of_seqs 123 out of 1009
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 03:36:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r94_A Protein YFHF; tetrameri 100.0 1.3E-34 4.3E-39 190.9 8.8 88 4-91 23-110 (118)
2 1x0g_A ISCA; [2Fe-2S], biosynt 100.0 9.3E-35 3.2E-39 189.7 7.5 87 4-90 25-111 (112)
3 1nwb_A Hypothetical protein AQ 100.0 1.8E-34 6.1E-39 191.7 5.3 88 4-91 31-118 (124)
4 2d2a_A SUFA protein; iron-sulf 100.0 3.4E-33 1.2E-37 190.1 8.9 86 3-88 60-145 (145)
5 2apn_A Protein HI1723; HI1723 100.0 2.7E-33 9.3E-38 183.1 5.5 86 3-88 29-114 (114)
6 2k4z_A DSRR; ISCA/SUFA/HESB li 99.9 9.2E-23 3.1E-27 135.5 9.0 75 4-81 44-121 (125)
7 2p2e_A Putative Fe-S biosynthe 99.6 1.3E-16 4.4E-21 106.2 4.3 72 5-77 26-115 (128)
8 2qgo_A Putative Fe-S biosynthe 99.5 4.5E-15 1.5E-19 100.3 3.3 64 8-75 36-103 (141)
9 1vd4_A Transcription initiatio 58.1 6.1 0.00021 21.1 2.0 20 77-96 39-59 (62)
10 2m0e_A Zinc finger and BTB dom 49.4 8 0.00027 16.1 1.3 12 79-90 4-16 (29)
11 1paa_A Yeast transcription fac 47.6 7.5 0.00026 16.6 1.0 11 79-89 4-15 (30)
12 1klr_A Zinc finger Y-chromosom 44.6 10 0.00035 15.9 1.3 11 79-89 4-15 (30)
13 1znf_A 31ST zinc finger from X 44.2 8.1 0.00028 16.0 0.8 11 79-89 3-14 (27)
14 1ard_A Yeast transcription fac 43.1 8.4 0.00029 16.2 0.8 11 79-89 4-15 (29)
15 2kvh_A Zinc finger and BTB dom 41.9 7.2 0.00024 16.4 0.4 11 79-89 5-16 (27)
16 1rik_A E6APC1 peptide; E6-bind 41.6 8.2 0.00028 16.3 0.6 11 79-89 4-15 (29)
17 1zfd_A SWI5; DNA binding motif 39.7 13 0.00044 16.2 1.2 12 78-89 4-18 (32)
18 2m0d_A Zinc finger and BTB dom 38.9 8.1 0.00028 16.3 0.4 10 79-88 5-15 (30)
19 2kvf_A Zinc finger and BTB dom 38.3 8.7 0.0003 16.1 0.4 11 79-89 5-16 (28)
20 2kfq_A FP1; protein, de novo p 37.8 9.1 0.00031 17.1 0.5 13 78-90 3-16 (32)
21 2elr_A Zinc finger protein 406 37.6 17 0.00059 16.2 1.5 13 77-89 9-22 (36)
22 1rim_A E6APC2 peptide; E6-bind 37.2 13 0.00046 16.6 1.0 11 79-89 4-15 (33)
23 1p7a_A BF3, BKLF, kruppel-like 36.3 14 0.00047 16.7 1.0 12 78-89 12-24 (37)
24 2m0f_A Zinc finger and BTB dom 35.2 10 0.00035 15.8 0.4 10 79-88 4-14 (29)
25 1ncs_A Peptide M30F, transcrip 34.5 13 0.00044 18.3 0.8 15 76-90 17-34 (47)
26 2elm_A Zinc finger protein 406 34.4 8.2 0.00028 17.9 -0.0 12 78-89 10-22 (37)
27 2elx_A Zinc finger protein 406 33.3 12 0.00039 16.6 0.4 12 78-89 8-20 (35)
28 1vs6_Z 50S ribosomal protein L 32.9 23 0.00078 20.5 1.7 17 78-94 14-30 (70)
29 1sp2_A SP1F2; zinc finger, tra 32.8 15 0.00052 15.8 0.8 12 78-89 3-17 (31)
30 2elp_A Zinc finger protein 406 32.8 14 0.00046 16.8 0.6 12 78-89 10-22 (37)
31 1va1_A Transcription factor SP 32.5 9.9 0.00034 17.5 0.1 12 78-89 9-23 (37)
32 1srk_A Zinc finger protein ZFP 30.6 11 0.00039 16.8 0.1 12 78-89 8-20 (35)
33 2ely_A Zinc finger protein 224 30.1 22 0.00075 17.0 1.2 14 77-90 12-26 (46)
34 2eos_A B-cell lymphoma 6 prote 29.3 18 0.00061 16.9 0.8 13 77-89 11-24 (42)
35 1bhi_A CRE-BP1, ATF-2; CRE bin 29.3 14 0.00049 16.8 0.4 12 78-89 7-21 (38)
36 2eln_A Zinc finger protein 406 27.8 13 0.00046 18.2 0.1 12 78-89 10-24 (38)
37 2yte_A Zinc finger protein 473 27.3 29 0.00099 16.0 1.4 13 77-89 10-23 (42)
38 2lvu_A Zinc finger and BTB dom 33.1 13 0.00045 15.2 0.0 12 79-90 4-16 (26)
39 2ytb_A Zinc finger protein 32; 26.6 25 0.00085 16.3 1.0 13 77-89 11-24 (42)
40 2elt_A Zinc finger protein 406 26.5 18 0.00061 16.1 0.4 12 78-89 10-22 (36)
41 2els_A Zinc finger protein 406 26.4 17 0.00059 16.3 0.4 12 78-89 10-22 (36)
42 2epc_A Zinc finger protein 32; 26.3 15 0.00052 17.1 0.1 12 78-89 12-24 (42)
43 2elv_A Zinc finger protein 406 26.2 18 0.00062 16.2 0.4 12 78-89 10-22 (36)
44 3iuf_A Zinc finger protein UBI 25.9 15 0.00052 18.2 0.1 12 78-89 8-20 (48)
45 2ep1_A Zinc finger protein 484 25.7 27 0.00091 16.6 1.1 13 77-89 12-25 (46)
46 1njq_A Superman protein; zinc- 25.4 19 0.00063 16.6 0.4 12 78-89 7-19 (39)
47 2enf_A Zinc finger protein 347 25.0 27 0.00092 16.6 1.0 14 76-89 11-25 (46)
48 1nkw_Y 50S ribosomal protein L 24.9 20 0.00068 20.9 0.5 15 79-93 15-29 (73)
49 2eoy_A Zinc finger protein 473 24.6 22 0.00077 17.0 0.6 12 78-89 13-25 (46)
50 2yu5_A Zinc finger protein 473 24.6 23 0.00078 16.7 0.6 12 78-89 13-25 (44)
51 2yti_A Zinc finger protein 347 24.5 30 0.001 16.4 1.1 13 77-89 12-25 (46)
52 2lvt_A Zinc finger and BTB dom 30.2 16 0.00055 15.3 0.0 13 79-91 4-17 (29)
53 2eq2_A Zinc finger protein 347 24.0 25 0.00086 16.7 0.8 13 77-89 12-25 (46)
54 2eps_A POZ-, at HOOK-, and zin 23.7 33 0.0011 17.2 1.3 11 78-88 42-53 (54)
55 2eq1_A Zinc finger protein 347 23.7 25 0.00086 16.7 0.7 13 77-89 12-25 (46)
56 2epz_A Zinc finger protein 28 23.6 18 0.00062 17.3 0.1 13 77-89 12-25 (46)
57 2ytm_A Zinc finger protein 28 23.6 24 0.00082 16.9 0.6 13 77-89 12-25 (46)
58 2fph_X YLMH; division protein, 23.4 21 0.00072 23.6 0.4 24 31-54 119-142 (165)
59 2el5_A Zinc finger protein 268 23.2 19 0.00064 16.8 0.1 12 78-89 11-23 (42)
60 2eoh_A Zinc finger protein 28 23.1 25 0.00085 16.8 0.6 13 77-89 12-25 (46)
61 2en7_A Zinc finger protein 268 23.0 31 0.0011 16.1 1.0 13 77-89 12-25 (44)
62 2elq_A Zinc finger protein 406 23.0 23 0.00079 15.8 0.4 12 78-89 10-22 (36)
63 2em6_A Zinc finger protein 224 22.7 31 0.0011 16.4 1.0 13 77-89 12-25 (46)
64 2epx_A Zinc finger protein 28 22.5 26 0.0009 16.6 0.7 13 77-89 12-25 (47)
65 2eon_A ZFP-95, zinc finger pro 22.2 26 0.00088 16.8 0.6 13 77-89 12-25 (46)
66 2lvr_A Zinc finger and BTB dom 27.7 19 0.00064 15.0 0.0 12 79-90 5-17 (30)
67 2en3_A ZFP-95, zinc finger pro 22.0 27 0.00092 16.6 0.6 12 78-89 13-25 (46)
68 2en9_A Zinc finger protein 28 21.7 26 0.00089 16.7 0.5 13 77-89 12-25 (46)
69 2yth_A Zinc finger protein 224 21.7 30 0.001 16.5 0.8 13 77-89 12-25 (46)
70 2enh_A Zinc finger protein 28 21.5 36 0.0012 16.1 1.1 13 77-89 12-25 (46)
71 2ytr_A Zinc finger protein 347 21.4 36 0.0012 16.1 1.0 13 77-89 12-25 (46)
72 2emi_A Zinc finger protein 484 21.3 22 0.00074 17.0 0.1 12 78-89 13-25 (46)
73 2yts_A Zinc finger protein 484 21.2 22 0.00074 16.9 0.1 12 78-89 13-25 (46)
74 2yrj_A Zinc finger protein 473 21.2 22 0.00074 16.9 0.1 12 78-89 13-25 (46)
75 2epv_A Zinc finger protein 268 21.1 26 0.00088 16.6 0.4 12 78-89 13-25 (44)
76 2emg_A Zinc finger protein 484 20.9 30 0.001 16.4 0.6 13 77-89 12-25 (46)
77 2em3_A Zinc finger protein 28 20.7 23 0.00077 16.9 0.1 12 78-89 13-25 (46)
78 2l0z_A Glycoprotein G2; zinc-b 20.6 39 0.0013 17.6 1.1 9 76-84 20-28 (42)
79 2eou_A Zinc finger protein 473 20.4 31 0.0011 16.2 0.6 13 77-89 12-25 (44)
80 2eq4_A Zinc finger protein 224 20.4 35 0.0012 16.1 0.9 13 77-89 12-25 (46)
81 2elz_A Zinc finger protein 224 20.4 28 0.00095 16.6 0.5 13 77-89 12-25 (46)
82 2ept_A Zinc finger protein 32; 20.3 27 0.00094 16.1 0.4 12 78-89 11-23 (41)
83 2ytp_A Zinc finger protein 484 20.3 23 0.00079 16.9 0.1 12 78-89 13-25 (46)
84 2ytn_A Zinc finger protein 347 20.3 36 0.0012 16.1 0.9 13 77-89 12-25 (46)
No 1
>1r94_A Protein YFHF; tetrameric, beta barrel, iron-sulfur cluster protein, pseudo-symmetric motifs, metal transport; 2.30A {Escherichia coli} SCOP: b.124.1.1 PDB: 1r95_A 1s98_A
Probab=100.00 E-value=1.3e-34 Score=190.88 Aligned_cols=88 Identities=45% Similarity=0.852 Sum_probs=72.9
Q ss_pred CCeEEEEEecCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEeCCCCceEEEECCCCCCCCCCC
Q 038717 4 RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCG 83 (100)
Q Consensus 4 ~~~lRl~v~~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~~~~~~gF~i~nP~~~~~C~CG 83 (100)
+.+|||+|+.+||+|++|.|.++++++++|.+++.+|++|+||+.+++||+|++|||+++.++++|+|+|||++.+||||
T Consensus 23 ~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~L~g~~IDy~~~~~g~gF~~~NPna~~~CgCG 102 (118)
T 1r94_A 23 GFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG 102 (118)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEEEEETTEEEEEEECTTCCC-----
T ss_pred CceEEEEEECCCCCCeEEEEEEccCCCCCceEEEECCEEEEEEHHHHHHhCCCEEEEEcCCCcCceEEeCCCCCCCCCCC
Confidence 57899999999999999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCC
Q 038717 84 ESFMTTSS 91 (100)
Q Consensus 84 ~Sf~~~~~ 91 (100)
+||++++.
T Consensus 103 ~SF~~~~~ 110 (118)
T 1r94_A 103 ESFKLAAA 110 (118)
T ss_dssp --------
T ss_pred CCcCCCCC
Confidence 99998765
No 2
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S cluster, iron, iron-sulfur cluster protein, scaffold, sulfur; 2.50A {Thermosynechococcus elongatus}
Probab=100.00 E-value=9.3e-35 Score=189.71 Aligned_cols=87 Identities=29% Similarity=0.572 Sum_probs=82.3
Q ss_pred CCeEEEEEecCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEeCCCCceEEEECCCCCCCCCCC
Q 038717 4 RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCG 83 (100)
Q Consensus 4 ~~~lRl~v~~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~~~~~~gF~i~nP~~~~~C~CG 83 (100)
+.+|||+|+.+||+|++|.|.|+++++++|.+++.+|++|+||+.+++||+|++|||++++++++|+|+|||++.+||||
T Consensus 25 ~~~lRv~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~l~g~~IDy~~~~~g~gF~~~nPna~~~CgCG 104 (112)
T 1x0g_A 25 AAILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWTIAIAAEAAELLRGLRVDYIEDLMGGAFRFHNPNASQTCGCG 104 (112)
T ss_dssp --CEEEEEEEBSSSSEEEEEEECSSCCTTCEEECSSSCCEEECGGGHHHHTTCEEEEEEETTEEEEEEECTTCSEECSSS
T ss_pred ceEEEEEEEcCCCCCeEEEEEECcCCCCCCEEEEeCCEEEEEeHHHHHHhCCCEEEEEecCCCCEEEEeCCCCCcCCCCC
Confidence 56899999999999999999999887889999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCC
Q 038717 84 ESFMTTS 90 (100)
Q Consensus 84 ~Sf~~~~ 90 (100)
+||+++.
T Consensus 105 ~SF~~~~ 111 (112)
T 1x0g_A 105 MAFRVSR 111 (112)
T ss_dssp SEEECCC
T ss_pred CccccCC
Confidence 9999874
No 3
>1nwb_A Hypothetical protein AQ_1857; QR6, structural genomics, protein structure initiative, NESG, reduced dimensionality PSI; NMR {Aquifex aeolicus} SCOP: b.124.1.1
Probab=100.00 E-value=1.8e-34 Score=191.65 Aligned_cols=88 Identities=36% Similarity=0.730 Sum_probs=68.8
Q ss_pred CCeEEEEEecCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEeCCCCceEEEECCCCCCCCCCC
Q 038717 4 RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCG 83 (100)
Q Consensus 4 ~~~lRl~v~~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~~~~~~gF~i~nP~~~~~C~CG 83 (100)
+.+|||+|+.+||+|++|.|.|+++++++|.+++.+|++|+||+.+++||+|++|||++++.+++|+|+|||++.+||||
T Consensus 31 ~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G~~IDy~~~~~g~gF~~~NPna~~~CgCG 110 (124)
T 1nwb_A 31 NPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAELDYVVDFMGGGFTIRNPNATGSCGCG 110 (124)
T ss_dssp SCEEEECCCCCCTTCCCCCCCEECSCCSSCCCCCCSSSEEEECTTTGGGSTTCEEEEEEETTEEEEEEECC---------
T ss_pred CceEEEEEEcCCCCCcEEEEEEccCCCCCceEEEeCCEEEEEehHHHHHhCCCEEEEEcCCCcceEEEeCCCCCcCCCCC
Confidence 56899999999999999999999887899999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCC
Q 038717 84 ESFMTTSS 91 (100)
Q Consensus 84 ~Sf~~~~~ 91 (100)
+||++++.
T Consensus 111 ~SF~~~~~ 118 (124)
T 1nwb_A 111 SSFSCGLE 118 (124)
T ss_dssp --------
T ss_pred CCcCCCcc
Confidence 99998764
No 4
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal transport; 2.70A {Escherichia coli}
Probab=100.00 E-value=3.4e-33 Score=190.10 Aligned_cols=86 Identities=40% Similarity=0.716 Sum_probs=82.4
Q ss_pred CCCeEEEEEecCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEeCCCCceEEEECCCCCCCCCC
Q 038717 3 QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGC 82 (100)
Q Consensus 3 ~~~~lRl~v~~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~~~~~~gF~i~nP~~~~~C~C 82 (100)
++.+|||+|+.+||+|++|.|.|+++++++|.+++.+|++|+||+.+++||+|++|||++++.+++|+|+|||++.+|||
T Consensus 60 ~~~~LRv~V~~gGCsG~~Y~l~l~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G~~IDy~e~l~g~gF~f~NPna~~~CGC 139 (145)
T 2d2a_A 60 GMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGC 139 (145)
T ss_dssp TCCEEEEEEEEETTTEEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEEEEETTEEEEEEECTTTCSCCCC
T ss_pred CCceEEEEEECCCCCCcEEEEEECcCCCCCCeEEEECCEEEEEeHHHHHhhCCCEEEEEcCCCcceEEEeCCCCCcccCC
Confidence 35789999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc
Q 038717 83 GESFMT 88 (100)
Q Consensus 83 G~Sf~~ 88 (100)
|+||++
T Consensus 140 G~SF~v 145 (145)
T 2d2a_A 140 GESFGV 145 (145)
T ss_dssp BCEEEC
T ss_pred CCCccC
Confidence 999974
No 5
>2apn_A Protein HI1723; HI1723 solution structure, structural genomics, structure 2 function project, S2F, unknown function; NMR {Haemophilus influenzae}
Probab=99.98 E-value=2.7e-33 Score=183.13 Aligned_cols=86 Identities=31% Similarity=0.655 Sum_probs=82.2
Q ss_pred CCCeEEEEEecCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEeCCCCceEEEECCCCCCCCCC
Q 038717 3 QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGC 82 (100)
Q Consensus 3 ~~~~lRl~v~~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~~~~~~gF~i~nP~~~~~C~C 82 (100)
++.+|||+|+.+||+|++|.|.+++++.++|.+++.+|++|+||+.+++||+|++|||+++..+++|+|+|||++.+|||
T Consensus 29 ~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~id~~s~~~l~g~~IDy~~~~~g~~F~~~nPna~~~CgC 108 (114)
T 2apn_A 29 TDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGC 108 (114)
T ss_dssp SSCEEEECCCCSSSSCSCCCEEECCSCCSSCEEEECSSSEEEECHHHHHHHTTCEEEEECSSSCCEEEEECHHHHCCCCC
T ss_pred CCceEEEEEeCCCCCCcEEEEEECcCCCCCCcEEEECCEEEEEehHHHHHhCCCEEEEEcCCCcceEEEeCCCCCcCCCC
Confidence 46799999999999999999999987788999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc
Q 038717 83 GESFMT 88 (100)
Q Consensus 83 G~Sf~~ 88 (100)
|+||++
T Consensus 109 G~SF~~ 114 (114)
T 2apn_A 109 GSSFSI 114 (114)
T ss_dssp CCCSCC
T ss_pred CCCccC
Confidence 999974
No 6
>2k4z_A DSRR; ISCA/SUFA/HESB like fold, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Allochromatium vinosum}
Probab=99.88 E-value=9.2e-23 Score=135.49 Aligned_cols=75 Identities=24% Similarity=0.444 Sum_probs=70.6
Q ss_pred CCeEEEEEe--cCCCCCcEEEEEeeccccccCceeEeCCEEEEECccchhhcCCcEEEEEe-CCCCceEEEECCCCCCCC
Q 038717 4 RPYLKLGVK--ARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVD-DKLRSEFVFINPNSKGQC 80 (100)
Q Consensus 4 ~~~lRl~v~--~~GC~G~~y~l~l~~~~~~~D~v~~~~gi~v~id~~~~~~L~g~~IDy~~-~~~~~gF~i~nP~~~~~C 80 (100)
+.+|||+|+ .+| |++|.|.|+++ .++|.+++.+|++|+||+.+++||+|++|||++ +..+++|+|+|||+++.|
T Consensus 44 ~~~LRv~V~~~~gG--G~~Y~l~l~~~-~~~D~v~e~~Gv~v~VD~~s~~~L~G~~IDy~~~~l~g~gF~~~NPna~~~~ 120 (125)
T 2k4z_A 44 GMCLRLAAGRNPDG--SIDYRMGFDDL-TEDDIRLTSEGVEIVIAPDYVSLLDQTTLDYVELEPGQFHFIFLNPRDPTYR 120 (125)
T ss_dssp TCEEEEEEEECTTS--CEEEEEEEECC-CSSSCEEECSSCEEECCTTTHHHHTTEEEEEEEEETTEEEEEEECSSSCSSC
T ss_pred CceEEEEEEecCCC--CEEEEEEecCC-CCCceEEEECCEEEEEeHHHHHhhCCCEEEEEeCCCCcCeEEECCCCCCccC
Confidence 578999999 888 99999999877 889999999999999999999999999999999 999999999999998776
Q ss_pred C
Q 038717 81 G 81 (100)
Q Consensus 81 ~ 81 (100)
.
T Consensus 121 p 121 (125)
T 2k4z_A 121 P 121 (125)
T ss_dssp C
T ss_pred C
Confidence 4
No 7
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=99.64 E-value=1.3e-16 Score=106.17 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=65.3
Q ss_pred CeEEEEEecC-------CCCC-cEEEEEeeccccc----cCceeEeCCEEEEECccchhhcCC-cEEEEEeCC----CCc
Q 038717 5 PYLKLGVKAR-------GCNG-LSYTLNYADERAK----FDELVEDKGVKILIDPKALMHVIG-TKMDFVDDK----LRS 67 (100)
Q Consensus 5 ~~lRl~v~~~-------GC~G-~~y~l~l~~~~~~----~D~v~~~~gi~v~id~~~~~~L~g-~~IDy~~~~----~~~ 67 (100)
..||+. .++ ||+| ++|.|.|++++.+ .|.+++.++++|+|++.++.||++ ++|||+++. +++
T Consensus 26 l~Lr~~-dg~g~y~k~ggCsg~~~Y~l~~v~~~~~~~~~~D~~~e~~g~~v~vd~~s~~~ldgg~~iDy~~~~~~l~L~s 104 (128)
T 2p2e_A 26 LLLDFD-DGVGALSKVGVCSLNSDFRILVVSKDMDYKKDYNEVIDSNIGKFYYKGYSKMYMDDNMKISLNTNNSLLRLTG 104 (128)
T ss_dssp EEEEEC-SSCSGGGGSSCCCCSCCEEEEEEETTSSCTTTSCEEEEETTSCEEECGGGGGGSCSEEEEEECSSSSCEEEEE
T ss_pred EEEEEe-CCCCccccCCCCCCCCEEEEEEeccCCCCCCCCCEEEEeCCEEEEECcchHHhhCCCeEEEEeCCCceEEecC
Confidence 468888 444 7999 5999999988888 899999999999999999999996 999999998 889
Q ss_pred e-EEEECCCCC
Q 038717 68 E-FVFINPNSK 77 (100)
Q Consensus 68 g-F~i~nP~~~ 77 (100)
+ |.|.|||+.
T Consensus 105 ~~f~~~NPN~~ 115 (128)
T 2p2e_A 105 DNSGELMPALS 115 (128)
T ss_dssp TTTEEEEEEEC
T ss_pred CccEEECCCCe
Confidence 9 999999986
No 8
>2qgo_A Putative Fe-S biosynthesis protein; PSI-2, NYSGXRC, 10399G, Fe-S cluster protein, structural GEN protein structure initiative; 2.04A {Lactobacillus acidophilus}
Probab=99.52 E-value=4.5e-15 Score=100.26 Aligned_cols=64 Identities=14% Similarity=0.250 Sum_probs=51.0
Q ss_pred EEEEecCCCC-CcEEEEEeecccccc-CceeEeC-CEEEEECccchhhcC-CcEEEEEeCCCCceEEEECCC
Q 038717 8 KLGVKARGCN-GLSYTLNYADERAKF-DELVEDK-GVKILIDPKALMHVI-GTKMDFVDDKLRSEFVFINPN 75 (100)
Q Consensus 8 Rl~v~~~GC~-G~~y~l~l~~~~~~~-D~v~~~~-gi~v~id~~~~~~L~-g~~IDy~~~~~~~gF~i~nP~ 75 (100)
|+.+.++||+ |++|.|.|++++.++ |.+++.+ |++|+||+.+++||+ |++|||+++ .|.+++|.
T Consensus 36 r~~v~gGGCSiG~~Y~l~~~~e~~~dyD~~~e~~gGv~v~Vd~~sl~yLd~G~~IDy~~~----~l~Lks~s 103 (141)
T 2qgo_A 36 KYSIQGGSCSMGAHFSIIWLDKVDPDYPVKIANEQNVKIYTSDFDKTMLGPNMVMDYNAG----SLSLSSDE 103 (141)
T ss_dssp TTCC---------CEEEEEESSCCTTCCEECBCSSCCEEEECHHHHTTSCSSEEEEEETT----EEEEEETT
T ss_pred EEEEeCccCCCCCEEEEEEeecCCCCCCEEEEeCCCEEEEECchHHHHhcCCCEEeEECC----EEEEcCCC
Confidence 8999999999 999999999888889 9999999 599999999999999 999999953 88887764
No 9
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=58.06 E-value=6.1 Score=21.05 Aligned_cols=20 Identities=20% Similarity=0.312 Sum_probs=15.5
Q ss_pred CCCCC-CCCCcccCCCCCCcc
Q 038717 77 KGQCG-CGESFMTTSSSGASK 96 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~~~~~~~~ 96 (100)
.-.|. ||.+|....+..+.+
T Consensus 39 ~~~C~~C~k~f~~~~~~~~~~ 59 (62)
T 1vd4_A 39 TFRCTFCHTEVEEDESAMPKK 59 (62)
T ss_dssp EEBCSSSCCBCEECTTCSCCC
T ss_pred CEECCCCCCccccCccccccc
Confidence 35785 999999888877655
No 10
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.42 E-value=8 Score=16.13 Aligned_cols=12 Identities=25% Similarity=0.819 Sum_probs=8.5
Q ss_pred CCC-CCCCcccCC
Q 038717 79 QCG-CGESFMTTS 90 (100)
Q Consensus 79 ~C~-CG~Sf~~~~ 90 (100)
.|. ||.+|....
T Consensus 4 ~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 4 KCPHCDKKFNQVG 16 (29)
T ss_dssp CCSSCCCCCCTTT
T ss_pred cCCCCCcccCCHH
Confidence 564 999997543
No 11
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=47.63 E-value=7.5 Score=16.58 Aligned_cols=11 Identities=36% Similarity=1.129 Sum_probs=8.0
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 4 ~C~~C~k~f~~~ 15 (30)
T 1paa_A 4 ACGLCNRAFTRR 15 (30)
T ss_dssp BCTTTCCBCSSS
T ss_pred CCcccCcccCCh
Confidence 564 99999754
No 12
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=44.56 E-value=10 Score=15.89 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=7.9
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||.+|...
T Consensus 4 ~C~~C~k~f~~~ 15 (30)
T 1klr_A 4 QCQYCEFRSADS 15 (30)
T ss_dssp CCSSSSCCCSCS
T ss_pred cCCCCCCccCCH
Confidence 564 99998753
No 13
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=44.21 E-value=8.1 Score=16.01 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=7.7
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 3 ~C~~C~k~f~~~ 14 (27)
T 1znf_A 3 KCGLCERSFVEK 14 (27)
T ss_dssp BCSSSCCBCSSH
T ss_pred cCCCCCCcCCCH
Confidence 464 99998753
No 14
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=43.13 E-value=8.4 Score=16.18 Aligned_cols=11 Identities=27% Similarity=0.824 Sum_probs=8.0
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 4 ~C~~C~~~f~~~ 15 (29)
T 1ard_A 4 VCEVCTRAFARQ 15 (29)
T ss_dssp BCTTTCCBCSSH
T ss_pred ECCCCCcccCCH
Confidence 574 99999753
No 15
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=41.92 E-value=7.2 Score=16.39 Aligned_cols=11 Identities=18% Similarity=0.510 Sum_probs=7.8
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 5 ~C~~C~k~f~~~ 16 (27)
T 2kvh_A 5 SCSLCPQRSRDF 16 (27)
T ss_dssp ECSSSSCEESSH
T ss_pred cCCCcChhhCCH
Confidence 464 99998753
No 16
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=41.56 E-value=8.2 Score=16.26 Aligned_cols=11 Identities=36% Similarity=1.005 Sum_probs=7.7
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||.+|...
T Consensus 4 ~C~~C~k~f~~~ 15 (29)
T 1rik_A 4 ACPECPKRFMRS 15 (29)
T ss_dssp ECSSSSCEESCS
T ss_pred cCCCCCchhCCH
Confidence 464 99998754
No 17
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=39.73 E-value=13 Score=16.17 Aligned_cols=12 Identities=25% Similarity=0.850 Sum_probs=8.9
Q ss_pred CCCC---CCCCcccC
Q 038717 78 GQCG---CGESFMTT 89 (100)
Q Consensus 78 ~~C~---CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 4 ~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 4 YSCDHPGCDKAFVRN 18 (32)
T ss_dssp BCCCCTTCCCCBSSS
T ss_pred CcCcCCCCCCccCCH
Confidence 3685 99999754
No 18
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=38.88 E-value=8.1 Score=16.25 Aligned_cols=10 Identities=60% Similarity=1.351 Sum_probs=7.3
Q ss_pred CCC-CCCCccc
Q 038717 79 QCG-CGESFMT 88 (100)
Q Consensus 79 ~C~-CG~Sf~~ 88 (100)
.|. ||.+|..
T Consensus 5 ~C~~C~~~f~~ 15 (30)
T 2m0d_A 5 QCDYCGRSFSD 15 (30)
T ss_dssp ECTTTCCEESC
T ss_pred cCCCCCcccCC
Confidence 464 9999864
No 19
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.31 E-value=8.7 Score=16.14 Aligned_cols=11 Identities=36% Similarity=1.078 Sum_probs=7.7
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 5 ~C~~C~k~f~~~ 16 (28)
T 2kvf_A 5 SCSVCGKRFSLK 16 (28)
T ss_dssp ECSSSCCEESCH
T ss_pred cCCCCCcccCCH
Confidence 464 99998753
No 20
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=37.85 E-value=9.1 Score=17.07 Aligned_cols=13 Identities=31% Similarity=0.731 Sum_probs=9.0
Q ss_pred CCCC-CCCCcccCC
Q 038717 78 GQCG-CGESFMTTS 90 (100)
Q Consensus 78 ~~C~-CG~Sf~~~~ 90 (100)
-.|. ||++|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (32)
T 2kfq_A 3 FACPACPKRFMRSD 16 (32)
T ss_dssp SSSSSSCTTHHHHH
T ss_pred CCCCCCCcccCCHH
Confidence 3574 999997543
No 21
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.62 E-value=17 Score=16.16 Aligned_cols=13 Identities=31% Similarity=0.905 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
...|. ||++|...
T Consensus 9 ~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 9 THLCDMCGKKFKSK 22 (36)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CeecCcCCCCcCch
Confidence 35775 99999753
No 22
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=37.18 E-value=13 Score=16.64 Aligned_cols=11 Identities=36% Similarity=1.005 Sum_probs=8.0
Q ss_pred CCC-CCCCcccC
Q 038717 79 QCG-CGESFMTT 89 (100)
Q Consensus 79 ~C~-CG~Sf~~~ 89 (100)
.|. ||++|...
T Consensus 4 ~C~~C~k~F~~~ 15 (33)
T 1rim_A 4 ACPECPKRFMRS 15 (33)
T ss_dssp CCSSSCCCCSSH
T ss_pred cCCCCCchhCCH
Confidence 574 99999753
No 23
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=36.30 E-value=14 Score=16.71 Aligned_cols=12 Identities=42% Similarity=0.791 Sum_probs=8.8
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 12 ~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 12 FQCPDCDRSFSRS 24 (37)
T ss_dssp BCCTTTCCCBSSH
T ss_pred ccCCCCCcccCcH
Confidence 4675 99999753
No 24
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.16 E-value=10 Score=15.79 Aligned_cols=10 Identities=50% Similarity=1.344 Sum_probs=7.1
Q ss_pred CCC-CCCCccc
Q 038717 79 QCG-CGESFMT 88 (100)
Q Consensus 79 ~C~-CG~Sf~~ 88 (100)
.|. ||++|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 2m0f_A 4 KCRECGKQFTT 14 (29)
T ss_dssp ECTTTSCEESC
T ss_pred cCCCCCCccCC
Confidence 464 9998864
No 25
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=34.46 E-value=13 Score=18.33 Aligned_cols=15 Identities=27% Similarity=0.693 Sum_probs=10.9
Q ss_pred CCCCC---CCCCCcccCC
Q 038717 76 SKGQC---GCGESFMTTS 90 (100)
Q Consensus 76 ~~~~C---~CG~Sf~~~~ 90 (100)
..-.| .||++|....
T Consensus 17 k~~~C~~~~C~k~F~~~~ 34 (47)
T 1ncs_A 17 KTFECLFPGCTKTFKRRY 34 (47)
T ss_dssp TEEECCCTTCCCEECSSS
T ss_pred CCeECCCCCCCCccCCHH
Confidence 34578 4999998654
No 26
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.43 E-value=8.2 Score=17.86 Aligned_cols=12 Identities=33% Similarity=0.503 Sum_probs=8.4
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|..+
T Consensus 10 ~~C~~C~k~f~~~ 22 (37)
T 2elm_A 10 YYCSQCHYSSITK 22 (37)
T ss_dssp EECSSSSCEEECH
T ss_pred eECCCCCcccCCH
Confidence 3574 99999753
No 27
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=33.27 E-value=12 Score=16.64 Aligned_cols=12 Identities=25% Similarity=0.736 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 8 ~~C~~C~k~f~~~ 20 (35)
T 2elx_A 8 YVCALCLKKFVSS 20 (35)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCcchhCCH
Confidence 3674 99999753
No 28
>1vs6_Z 50S ribosomal protein L31; ribosome, kasugamycin; 3.46A {Escherichia coli} SCOP: d.325.1.2 PDB: 1vs8_Z 2aw4_Z 2awb_Z 2j28_Z 2rdo_Z 2vhm_Z 2vhn_Z 3bbx_Z 3e1b_S 3e1d_S 3iyx_A 3iyy_A 3izt_b* 3izu_b* 3j0t_2* 3j0w_2* 3j0y_2* 3j11_2* 3j12_2* 3j14_2*
Probab=32.88 E-value=23 Score=20.48 Aligned_cols=17 Identities=29% Similarity=0.755 Sum_probs=13.9
Q ss_pred CCCCCCCCcccCCCCCC
Q 038717 78 GQCGCGESFMTTSSSGA 94 (100)
Q Consensus 78 ~~C~CG~Sf~~~~~~~~ 94 (100)
-.|.||+.|....+.+.
T Consensus 14 ~~~s~g~~f~t~ST~~~ 30 (70)
T 1vs6_Z 14 ASCSCGNVMKIRSTVGH 30 (70)
T ss_dssp CCCCSSCCCCCBCCCCC
T ss_pred EEECCCCEEEEeecCCC
Confidence 47999999998887653
No 29
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=32.78 E-value=15 Score=15.82 Aligned_cols=12 Identities=33% Similarity=0.780 Sum_probs=8.7
Q ss_pred CCC---CCCCCcccC
Q 038717 78 GQC---GCGESFMTT 89 (100)
Q Consensus 78 ~~C---~CG~Sf~~~ 89 (100)
-.| .||++|...
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRS 17 (31)
T ss_dssp CBCCSTTCCCBCSSH
T ss_pred cCCcCCCCCcccCCH
Confidence 357 599999753
No 30
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.75 E-value=14 Score=16.80 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=8.8
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||.+|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (37)
T 2elp_A 10 MKCPYCDFYFMKN 22 (37)
T ss_dssp EECSSSSCEECSS
T ss_pred eECCCCChhhccC
Confidence 4674 99999764
No 31
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=32.51 E-value=9.9 Score=17.55 Aligned_cols=12 Identities=33% Similarity=0.814 Sum_probs=9.1
Q ss_pred CCCC---CCCCcccC
Q 038717 78 GQCG---CGESFMTT 89 (100)
Q Consensus 78 ~~C~---CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 9 ~~C~~~~C~k~f~~~ 23 (37)
T 1va1_A 9 HICHIQGCGKVYGKT 23 (37)
T ss_dssp EECCSTTCCCEESCH
T ss_pred CCCCCCCCCCccCCH
Confidence 4686 99999753
No 32
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=30.56 E-value=11 Score=16.76 Aligned_cols=12 Identities=33% Similarity=0.589 Sum_probs=8.4
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 8 ~~C~~C~k~f~~~ 20 (35)
T 1srk_A 8 FVCRICLSAFTTK 20 (35)
T ss_dssp EECSSSCCEESSH
T ss_pred eeCCCCCcccCCH
Confidence 3574 99998753
No 33
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=30.08 E-value=22 Score=17.02 Aligned_cols=14 Identities=36% Similarity=0.738 Sum_probs=9.9
Q ss_pred CCCCC-CCCCcccCC
Q 038717 77 KGQCG-CGESFMTTS 90 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~~ 90 (100)
.-.|. ||++|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 12 PFKCVECGKGFSRRS 26 (46)
T ss_dssp SBCCSSSCCCBSSTT
T ss_pred CcccCccCcccCCHH
Confidence 34674 999997653
No 34
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.35 E-value=18 Score=16.93 Aligned_cols=13 Identities=31% Similarity=0.703 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 11 ~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 11 PYPCEICGTRFRHL 24 (42)
T ss_dssp CBCCSSSCCCBSSH
T ss_pred CEECCCCCCccCCH
Confidence 34685 99999753
No 35
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.29 E-value=14 Score=16.82 Aligned_cols=12 Identities=33% Similarity=0.833 Sum_probs=9.2
Q ss_pred CCCC---CCCCcccC
Q 038717 78 GQCG---CGESFMTT 89 (100)
Q Consensus 78 ~~C~---CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 7 ~~C~~~~C~k~f~~~ 21 (38)
T 1bhi_A 7 FLCTAPGCGQRFTNE 21 (38)
T ss_dssp EECCCTTTCCEESSH
T ss_pred eECCCCCCCcccCCH
Confidence 4687 99999753
No 36
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.80 E-value=13 Score=18.21 Aligned_cols=12 Identities=25% Similarity=0.379 Sum_probs=9.2
Q ss_pred CCCC---CCCCcccC
Q 038717 78 GQCG---CGESFMTT 89 (100)
Q Consensus 78 ~~C~---CG~Sf~~~ 89 (100)
-.|. ||++|..+
T Consensus 10 ~~C~~~~C~k~F~~~ 24 (38)
T 2eln_A 10 LKCPTDGCDYSTPDK 24 (38)
T ss_dssp EECSSSSCCCEESCH
T ss_pred CCCCCCCCCCccCCH
Confidence 4685 99999754
No 37
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.32 E-value=29 Score=16.00 Aligned_cols=13 Identities=31% Similarity=0.749 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 10 ~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 10 PYSCAECKETFSDN 23 (42)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CeECCCCCCccCCH
Confidence 35685 99999753
No 38
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=33.07 E-value=13 Score=15.24 Aligned_cols=12 Identities=42% Similarity=1.126 Sum_probs=8.5
Q ss_pred CCC-CCCCcccCC
Q 038717 79 QCG-CGESFMTTS 90 (100)
Q Consensus 79 ~C~-CG~Sf~~~~ 90 (100)
.|. ||.+|....
T Consensus 4 ~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 4 VCERCGKRFVQSS 16 (26)
Confidence 464 999997654
No 39
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.64 E-value=25 Score=16.27 Aligned_cols=13 Identities=31% Similarity=0.887 Sum_probs=9.2
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 11 ~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 11 PYRCDQCGKAFSQK 24 (42)
T ss_dssp SBCCTTTTCCBSSH
T ss_pred CeeCCCccchhCCH
Confidence 34674 99999753
No 40
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.53 E-value=18 Score=16.09 Aligned_cols=12 Identities=17% Similarity=0.382 Sum_probs=8.4
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||.+|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (36)
T 2elt_A 10 YKCPQCSYASAIK 22 (36)
T ss_dssp EECSSSSCEESSH
T ss_pred CCCCCCCcccCCH
Confidence 3574 99998753
No 41
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.39 E-value=17 Score=16.25 Aligned_cols=12 Identities=25% Similarity=0.586 Sum_probs=8.4
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (36)
T 2els_A 10 FTCEYCNKVFKFK 22 (36)
T ss_dssp EECTTTCCEESSH
T ss_pred EECCCCCceeCCH
Confidence 3574 99998743
No 42
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=26.28 E-value=15 Score=17.11 Aligned_cols=12 Identities=50% Similarity=1.115 Sum_probs=8.7
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 12 ~~C~~C~k~f~~~ 24 (42)
T 2epc_A 12 YLCGQCGKSFTQR 24 (42)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCcccCCH
Confidence 4674 99999753
No 43
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.16 E-value=18 Score=16.19 Aligned_cols=12 Identities=25% Similarity=0.672 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||.+|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (36)
T 2elv_A 10 YDCHICERKFKNE 22 (36)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCCccCCH
Confidence 4674 99998753
No 44
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=25.90 E-value=15 Score=18.24 Aligned_cols=12 Identities=25% Similarity=0.847 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 8 ~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 8 YACDICGKRYKNR 20 (48)
T ss_dssp EECTTTCCEESSH
T ss_pred EECCCcCcccCCH
Confidence 3575 99999643
No 45
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.71 E-value=27 Score=16.57 Aligned_cols=13 Identities=38% Similarity=1.030 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 12 PYECSDCGKSFIKK 25 (46)
T ss_dssp SSCCSSSCCCCSSH
T ss_pred CcCCCCCCchhCCH
Confidence 35785 99999753
No 46
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.36 E-value=19 Score=16.60 Aligned_cols=12 Identities=25% Similarity=0.731 Sum_probs=8.3
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 7 ~~C~~C~k~f~~~ 19 (39)
T 1njq_A 7 YTCSFCKREFRSA 19 (39)
T ss_dssp EECTTTCCEESSH
T ss_pred eECCCCCcccCCH
Confidence 3574 99998643
No 47
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.98 E-value=27 Score=16.61 Aligned_cols=14 Identities=29% Similarity=0.812 Sum_probs=9.8
Q ss_pred CCCCCC-CCCCcccC
Q 038717 76 SKGQCG-CGESFMTT 89 (100)
Q Consensus 76 ~~~~C~-CG~Sf~~~ 89 (100)
..-.|. ||++|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2enf_A 11 KPYKCNECGKVFTQN 25 (46)
T ss_dssp CSCBCSSSCCBCSSH
T ss_pred cCeECCCCCcccCCH
Confidence 335785 99999753
No 48
>1nkw_Y 50S ribosomal protein L31; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_Y* 1nwy_Y* 1pnu_Y 1pny_Y 1sm1_Y* 1vor_1 1vou_1 1vow_1 1voy_1 1vp0_1 1xbp_Y* 1yl3_4 2b66_4 2b9n_4 2b9p_4
Probab=24.95 E-value=20 Score=20.94 Aligned_cols=15 Identities=13% Similarity=-0.128 Sum_probs=11.8
Q ss_pred CCCCCCCcccCCCCC
Q 038717 79 QCGCGESFMTTSSSG 93 (100)
Q Consensus 79 ~C~CG~Sf~~~~~~~ 93 (100)
.|.||+.|....+..
T Consensus 15 ~~s~g~~f~t~ST~~ 29 (73)
T 1nkw_Y 15 IYQGQVVMETMSTRP 29 (73)
T ss_pred EECCCCEEEEcccCC
Confidence 688999998777654
No 49
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.56 E-value=22 Score=16.99 Aligned_cols=12 Identities=25% Similarity=0.783 Sum_probs=8.8
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 13 FKCNKCEKTFSCS 25 (46)
T ss_dssp EECSSSCCEESSS
T ss_pred EECcCCCCcCCCH
Confidence 4674 99999754
No 50
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.56 E-value=23 Score=16.72 Aligned_cols=12 Identities=25% Similarity=0.706 Sum_probs=8.8
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~f~~~ 25 (44)
T 2yu5_A 13 FKCSKCDRVFTQR 25 (44)
T ss_dssp EECSSSSCEESSS
T ss_pred eECCCCCchhCCH
Confidence 4674 99999754
No 51
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.51 E-value=30 Score=16.43 Aligned_cols=13 Identities=31% Similarity=0.871 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2yti_A 12 PYKCNECGKVFTQN 25 (46)
T ss_dssp TTCCSSSCCCCSSH
T ss_pred CeECCCCCcccCCh
Confidence 35785 99999753
No 52
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=30.15 E-value=16 Score=15.32 Aligned_cols=13 Identities=54% Similarity=1.094 Sum_probs=9.0
Q ss_pred CCC-CCCCcccCCC
Q 038717 79 QCG-CGESFMTTSS 91 (100)
Q Consensus 79 ~C~-CG~Sf~~~~~ 91 (100)
.|. ||++|....+
T Consensus 4 ~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 4 QCVMCGKAFTQASS 17 (29)
Confidence 464 9999976543
No 53
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.03 E-value=25 Score=16.73 Aligned_cols=13 Identities=46% Similarity=0.986 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 12 PYQCNECGKAFSQT 25 (46)
T ss_dssp SSSCCSSCCCCSSH
T ss_pred CeECCCCCcccCCH
Confidence 35785 99999753
No 54
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.68 E-value=33 Score=17.16 Aligned_cols=11 Identities=9% Similarity=0.099 Sum_probs=7.8
Q ss_pred CCCC-CCCCccc
Q 038717 78 GQCG-CGESFMT 88 (100)
Q Consensus 78 ~~C~-CG~Sf~~ 88 (100)
-.|. ||++|+.
T Consensus 42 ~~C~~C~k~F~~ 53 (54)
T 2eps_A 42 HKCQVWVSGPSS 53 (54)
T ss_dssp CCSSSSCCSSCC
T ss_pred ccCCCCCCCCCC
Confidence 4674 8888864
No 55
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.68 E-value=25 Score=16.73 Aligned_cols=13 Identities=31% Similarity=0.892 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 12 PYKCNECGKAFRAH 25 (46)
T ss_dssp CCCCTTTTCCCSSH
T ss_pred CeECCcCChhhCCH
Confidence 35785 99999753
No 56
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.63 E-value=18 Score=17.30 Aligned_cols=13 Identities=31% Similarity=0.713 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 12 PFDCIDCGKAFSDH 25 (46)
T ss_dssp SBCCTTTCCCBSSH
T ss_pred CeECCCCCceeCCH
Confidence 35775 99999753
No 57
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.60 E-value=24 Score=16.92 Aligned_cols=13 Identities=31% Similarity=0.751 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 12 PYKCMECGKAFGDN 25 (46)
T ss_dssp SSSBTTTTBCCSSH
T ss_pred CcCCCCCCchhCCH
Confidence 45785 99999753
No 58
>2fph_X YLMH; division protein, bacteria, GRAM+, DNA binding protein; 1.70A {Streptococcus pneumoniae}
Probab=23.40 E-value=21 Score=23.58 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=21.3
Q ss_pred ccCceeEeCCEEEEECccchhhcC
Q 038717 31 KFDELVEDKGVKILIDPKALMHVI 54 (100)
Q Consensus 31 ~~D~v~~~~gi~v~id~~~~~~L~ 54 (100)
=+|+++..+++.|+++++.+.||.
T Consensus 119 iGDI~v~~~~~qv~v~~~i~~~i~ 142 (165)
T 2fph_X 119 FGDILVDEERAQIMINQQFLLLFQ 142 (165)
T ss_dssp EEEEECSSSCCEEEEEGGGHHHHH
T ss_pred cCCEEEECCEEEEEEcHHHHHHHH
Confidence 389999888999999999998885
No 59
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=23.19 E-value=19 Score=16.80 Aligned_cols=12 Identities=33% Similarity=0.963 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 11 ~~C~~C~k~f~~~ 23 (42)
T 2el5_A 11 YECSECGKAFNRK 23 (42)
T ss_dssp EECSSSCCEESSH
T ss_pred ccCCCcChhhCCH
Confidence 3674 99999753
No 60
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.07 E-value=25 Score=16.82 Aligned_cols=13 Identities=23% Similarity=0.759 Sum_probs=9.2
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 12 PYECKECRKTFIQI 25 (46)
T ss_dssp SCCCSSSCCCCSSH
T ss_pred CcCCCCcCchhCCH
Confidence 35675 99999753
No 61
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.04 E-value=31 Score=16.06 Aligned_cols=13 Identities=31% Similarity=0.848 Sum_probs=9.2
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2en7_A 12 PYVCNECGKAFRSK 25 (44)
T ss_dssp SSCCTTTCCCCSSH
T ss_pred CeECCCCCCccCCH
Confidence 35674 99999753
No 62
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.96 E-value=23 Score=15.79 Aligned_cols=12 Identities=17% Similarity=0.285 Sum_probs=8.3
Q ss_pred CCC-CCCCCcccC
Q 038717 78 GQC-GCGESFMTT 89 (100)
Q Consensus 78 ~~C-~CG~Sf~~~ 89 (100)
-.| -||.+|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (36)
T 2elq_A 10 FKCSLCEYATRSK 22 (36)
T ss_dssp EECSSSSCEESCH
T ss_pred ccCCCCCchhCCH
Confidence 357 499998753
No 63
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.70 E-value=31 Score=16.41 Aligned_cols=13 Identities=31% Similarity=0.843 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 12 CYKCDVCGKEFSQS 25 (46)
T ss_dssp CCBCSSSCCBCSSH
T ss_pred CeECCCCCcccCCH
Confidence 35685 99999753
No 64
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.55 E-value=26 Score=16.63 Aligned_cols=13 Identities=31% Similarity=0.884 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (47)
T 2epx_A 12 PYECIECGKAFIQN 25 (47)
T ss_dssp SBCCSSSCCCBSSH
T ss_pred CEECCccCchhCCh
Confidence 35775 99999753
No 65
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.16 E-value=26 Score=16.80 Aligned_cols=13 Identities=31% Similarity=0.887 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 12 PYKCQVCGKAFRVS 25 (46)
T ss_dssp SCBCSSSCCBCSSH
T ss_pred ccCCCCCCcccCcH
Confidence 35785 99999753
No 66
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=27.67 E-value=19 Score=15.03 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=8.6
Q ss_pred CCC-CCCCcccCC
Q 038717 79 QCG-CGESFMTTS 90 (100)
Q Consensus 79 ~C~-CG~Sf~~~~ 90 (100)
.|. ||.+|....
T Consensus 5 ~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 5 VCIHCQRQFADPG 17 (30)
Confidence 564 999997554
No 67
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.04 E-value=27 Score=16.62 Aligned_cols=12 Identities=42% Similarity=0.792 Sum_probs=8.7
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~F~~~ 25 (46)
T 2en3_A 13 FQCKECGMNFSWS 25 (46)
T ss_dssp EECSSSCCEESSS
T ss_pred eeCcccChhhCCH
Confidence 4674 99999754
No 68
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.66 E-value=26 Score=16.72 Aligned_cols=13 Identities=23% Similarity=0.695 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 12 LFKCNECKKTFTQS 25 (46)
T ss_dssp CCBCTTTCCBCSSH
T ss_pred CEECCccCcccCCH
Confidence 35785 99999753
No 69
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.66 E-value=30 Score=16.46 Aligned_cols=13 Identities=38% Similarity=0.861 Sum_probs=9.2
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 12 PFQCEECGKRFTQN 25 (46)
T ss_dssp SBCCSSSCCCBSSH
T ss_pred CCCCCCCCcccCCH
Confidence 34674 99999753
No 70
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.54 E-value=36 Score=16.15 Aligned_cols=13 Identities=23% Similarity=0.680 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 12 PYECDVCRKAFSHH 25 (46)
T ss_dssp SCBCTTTCCBCSSS
T ss_pred CcCCCCcCchhCCH
Confidence 35675 99999754
No 71
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.44 E-value=36 Score=16.07 Aligned_cols=13 Identities=38% Similarity=0.956 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 12 PYKCNECGKAFSQT 25 (46)
T ss_dssp TTCCTTTCCCCSSH
T ss_pred CcCCCCCCCccCCH
Confidence 35785 99999753
No 72
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.32 E-value=22 Score=17.01 Aligned_cols=12 Identities=33% Similarity=1.099 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~F~~~ 25 (46)
T 2emi_A 13 YECSECGKAFIQK 25 (46)
T ss_dssp EECSSSCCEESSH
T ss_pred CCCCCCCcccCCH
Confidence 4674 99999753
No 73
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.25 E-value=22 Score=16.94 Aligned_cols=12 Identities=42% Similarity=1.029 Sum_probs=8.6
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~f~~~ 25 (46)
T 2yts_A 13 YICNECGKSFIQK 25 (46)
T ss_dssp EECSSSCCEESSH
T ss_pred EECCCCChhhCCh
Confidence 4674 99999753
No 74
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.18 E-value=22 Score=16.93 Aligned_cols=12 Identities=42% Similarity=1.176 Sum_probs=8.6
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 13 YRCGECGKAFAQK 25 (46)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCCccCCH
Confidence 4674 99999753
No 75
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.15 E-value=26 Score=16.62 Aligned_cols=12 Identities=33% Similarity=1.002 Sum_probs=8.6
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~F~~~ 25 (44)
T 2epv_A 13 YECNECGKAFIWK 25 (44)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCcccCch
Confidence 4675 99999653
No 76
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.93 E-value=30 Score=16.44 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 12 PFICSECGKVFTHK 25 (46)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CEECCccCcccCCH
Confidence 35785 99999753
No 77
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.71 E-value=23 Score=16.92 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~F~~~ 25 (46)
T 2em3_A 13 YECKVCSKAFTQK 25 (46)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCcccCCH
Confidence 4674 99999753
No 78
>2l0z_A Glycoprotein G2; zinc-binding domain, virus envelope glycoprotein, GPC, junin arenavirus, viral protein; NMR {Junin virus}
Probab=20.65 E-value=39 Score=17.61 Aligned_cols=9 Identities=56% Similarity=1.313 Sum_probs=6.9
Q ss_pred CCCCCCCCC
Q 038717 76 SKGQCGCGE 84 (100)
Q Consensus 76 ~~~~C~CG~ 84 (100)
..+.|+||.
T Consensus 20 ~~~~C~CG~ 28 (42)
T 2l0z_A 20 SLGGCRCGK 28 (42)
T ss_dssp TTSSBTTTT
T ss_pred CCceecccc
Confidence 447899995
No 79
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.43 E-value=31 Score=16.24 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 12 TSECQECGKIFRHS 25 (44)
T ss_dssp CCCCTTTCCCCSSH
T ss_pred CeECCCCCcccCCH
Confidence 35685 99999753
No 80
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.42 E-value=35 Score=16.11 Aligned_cols=13 Identities=38% Similarity=0.833 Sum_probs=9.4
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 12 LYNCKECGKSFSRA 25 (46)
T ss_dssp CCCBTTTTBCCSCH
T ss_pred CeECCCCCCccCch
Confidence 35785 99999754
No 81
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.37 E-value=28 Score=16.61 Aligned_cols=13 Identities=23% Similarity=0.764 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 12 PYKCEDCGKGYNRR 25 (46)
T ss_dssp SCBCSSSCCBCSSH
T ss_pred CeeCcccCchhCCH
Confidence 35784 99999753
No 82
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.34 E-value=27 Score=16.10 Aligned_cols=12 Identities=42% Similarity=0.974 Sum_probs=8.5
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 11 ~~C~~C~k~f~~~ 23 (41)
T 2ept_A 11 YECQECGKSFRQK 23 (41)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCCCCCCcCCH
Confidence 3574 99999653
No 83
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.34 E-value=23 Score=16.93 Aligned_cols=12 Identities=33% Similarity=1.005 Sum_probs=8.6
Q ss_pred CCCC-CCCCcccC
Q 038717 78 GQCG-CGESFMTT 89 (100)
Q Consensus 78 ~~C~-CG~Sf~~~ 89 (100)
-.|. ||++|...
T Consensus 13 ~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 13 YECSECGKAFARK 25 (46)
T ss_dssp EECSSSCCEESSH
T ss_pred eECCcCCcccCCH
Confidence 4675 99999753
No 84
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.30 E-value=36 Score=16.08 Aligned_cols=13 Identities=31% Similarity=0.871 Sum_probs=9.3
Q ss_pred CCCCC-CCCCcccC
Q 038717 77 KGQCG-CGESFMTT 89 (100)
Q Consensus 77 ~~~C~-CG~Sf~~~ 89 (100)
.-.|. ||++|...
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 12 PYKCNECGKVFTQN 25 (46)
T ss_dssp SCBCTTTCCBCSSH
T ss_pred CeECCCCCCeeCCH
Confidence 35785 99999753
Done!