BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038727
(565 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3MHH6|PYRD2_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Bos taurus GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 288/570 (50%), Positives = 377/570 (66%), Gaps = 20/570 (3%)
Query: 2 WRRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61
WRR+ S+ TR ++DA+V+G GHNGL+AAAYL R G++ AV ERRHVIGGAAVT
Sbjct: 20 WRRALSD----TRGRLKPEYDAVVVGAGHNGLVAAAYLQRFGVNTAVFERRHVIGGAAVT 75
Query: 62 EELIPGFKFSRCSYLQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDG-------LYL 114
EE++PGFKFSR SYL SLLRP + ELELKKHGL+L SFTP L+ L
Sbjct: 76 EEIVPGFKFSRASYLLSLLRPQIYSELELKKHGLRLHLRNPYSFTPMLEEGTGGKVPRSL 135
Query: 115 LLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPP--EALHGDLSFHD 172
LLG D +N +I++FSK+DA +P+YE + + +D LLDS P EA
Sbjct: 136 LLGTDMVENQKQIAQFSKKDAQAFPKYEAFMDRLALAIDPLLDSAPVDLEAFQRGSLLQR 195
Query: 173 LLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAI 232
L K ++ A C+ LG + L + +L +P K+L++WFES+ LKAT+A DA+
Sbjct: 196 LKSLSTLKPLWQAGCI-----LGAQ-LPQYYQVLTAPAAKVLDQWFESEPLKATLATDAV 249
Query: 233 TGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNT 292
G+M + + PGSGYVLLHHVMG +G R W +V+GGMG++S AI+ +AT G I
Sbjct: 250 IGAMTNPYIPGSGYVLLHHVMGSLEGVRGAWGYVQGGMGALSDAIASSATAHGVSIFTEK 309
Query: 293 EVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSD 352
V+++ + G V GV+L DG+ V S VLSNA+P TF+ L P++ LP++F+ I D
Sbjct: 310 TVAKVQVSSGGRVQGVVLQDGSEVRSKVVLSNASPQITFLKLTPQEWLPEEFVARIAQLD 369
Query: 353 YHSGVTKINVAVDKLPQFHCCKSSQLEVG-PHHTATVHIGCESMEEIGSACQDAWNGLPS 411
S VTKINVAV++LP F ++ + PHH ++H+ CE + A +D +GLPS
Sbjct: 370 TKSPVTKINVAVNRLPDFLAAPNTPGDQPLPHHQCSIHLNCEDTLLVHQAFEDTLDGLPS 429
Query: 412 RRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDE 471
+RP++E+ IPSSLD T++PPG HVVSLFTQYTPY + G D R +YA + F I+
Sbjct: 430 KRPLIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKAWDEQQRNTYADRVFDCIEA 489
Query: 472 YAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGL 531
YAPGF SV+G D+LTPPDLER FGL GGNIFH AM LD L+ RPV S Y +P+RGL
Sbjct: 490 YAPGFKGSVVGRDILTPPDLERVFGLPGGNIFHCAMSLDQLYFARPVPLHSSYCSPLRGL 549
Query: 532 YLCGSGSHPGGGVMGAPGRNAAHVVLQDFK 561
YLCGSG+HPGGGVMGA GRNAAHVV +D +
Sbjct: 550 YLCGSGAHPGGGVMGAAGRNAAHVVFRDLR 579
>sp|Q8N2H3|PYRD2_HUMAN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Homo sapiens GN=PYROXD2 PE=2 SV=2
Length = 581
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 290/568 (51%), Positives = 376/568 (66%), Gaps = 16/568 (2%)
Query: 2 WRRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61
WRR + R ++DA+VIG GHNGL+AAAYL R G++ AV ERRHVIGGAAVT
Sbjct: 20 WRRDNTEA----RGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
Query: 62 EELIPGFKFSRCSYLQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDG-------LYL 114
EE+IPGFKFSR SYL SLLRP + +LELKKHGL+L SFTP L+ L
Sbjct: 76 EEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRCL 135
Query: 115 LLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLL 174
LLG D +N +I++FS++DA +P+YE + + +D LLD+ P + H L
Sbjct: 136 LLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAAPVDMAAFQ---HGSL 192
Query: 175 RDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITG 234
+M+ L+ LG + L + ++L +P TK+L++WFES+ LKAT+A DA+ G
Sbjct: 193 LQRMRSLSTLKPLLKAGRILGAQ-LPRYYEVLTAPITKVLDQWFESEPLKATLATDAVIG 251
Query: 235 SMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEV 294
+M S H PGSGYVLLHHVMG +G + W +V+GGMG++S AI+ +AT GA I V
Sbjct: 252 AMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTV 311
Query: 295 SQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYH 354
+++ + G V GV+L DGT V S VLSN +P TF+ L P++ LP++FL I D
Sbjct: 312 AKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEEFLERISQLDTR 371
Query: 355 SGVTKINVAVDKLPQFHCCKSS-QLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRR 413
S VTKINVAVD+LP F ++ + + PHH ++H+ CE + A +DA +GLPS R
Sbjct: 372 SPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLPSHR 431
Query: 414 PVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYA 473
PV+E+ IPSSLD T++PPG HVVSLFTQY PY + G D R++YA + F I+ YA
Sbjct: 432 PVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYADRVFDCIEVYA 491
Query: 474 PGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYL 533
PGF SV+G D+LTPPDLER FGL GGNIFH AM LD L+ RPV SGYR P++GLYL
Sbjct: 492 PGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQGLYL 551
Query: 534 CGSGSHPGGGVMGAPGRNAAHVVLQDFK 561
CGSG+HPGGGVMGA GRNAAHV +D K
Sbjct: 552 CGSGAHPGGGVMGAAGRNAAHVAFRDLK 579
>sp|Q5RAP5|PYRD2_PONAB Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Pongo abelii GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 284/571 (49%), Positives = 375/571 (65%), Gaps = 22/571 (3%)
Query: 2 WRRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61
WRR+ + + ++DA+VIG GHNGL+ AAYL R G++ AV ERRHVIGGAAVT
Sbjct: 20 WRRAHTEAGGGLK----PEYDAVVIGAGHNGLVVAAYLQRLGVNTAVFERRHVIGGAAVT 75
Query: 62 EELIPGFKFSRCSYLQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDG-------LYL 114
EE+IPGFKFSR SYL SLLRP + +LELKKHGL+L SFTP L+ L
Sbjct: 76 EEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRSL 135
Query: 115 LLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLL 174
LLG D +N +I++FS++DA +PRYE + + +D LLD+ P +
Sbjct: 136 LLGTDMAENQKQIAQFSRKDAQVFPRYEEFMHRLALAIDPLLDAAP-------VDMAAFQ 188
Query: 175 RDKMQKSVFWARCLRHVLSLGQ---KDLVDFMDILLSPTTKILNKWFESDVLKATVAADA 231
R + + + L+ +L G+ L + ++L +P TK+L++WFES+ LKAT+A DA
Sbjct: 189 RGSLLQRMRSFSTLKPLLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPLKATLATDA 248
Query: 232 ITGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVN 291
+ G+M S H PGSGYVLLHHVMG +G + W +V+GGMG++S AI+ +AT GA I
Sbjct: 249 VIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFTE 308
Query: 292 TEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYS 351
V+++ + G V GV+L DGT V S VLSN +P TF+ L P++ LP++FL I
Sbjct: 309 KTVAKVQVNSEGCVQGVVLEDGTEVRSKVVLSNTSPQITFLKLTPQEWLPEEFLERISQL 368
Query: 352 DYHSGVTKINVAVDKLPQFHCCKSS-QLEVGPHHTATVHIGCESMEEIGSACQDAWNGLP 410
D S VTKINVAVD+LP F ++ + + PHH ++H+ CE + A +DA +GLP
Sbjct: 369 DTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLP 428
Query: 411 SRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLID 470
S RP++E+ IPSSLD ++P G HVVSLFTQYTPY + G D R++YA + F ++
Sbjct: 429 SHRPIIELCIPSSLDPPLAPSGCHVVSLFTQYTPYTLAGGKAWDEQERDAYADRVFDCVE 488
Query: 471 EYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRG 530
YAPGF SV+G D+LTPPDLER FGL GGNIFH AM LD L+ RPV SGYR P++G
Sbjct: 489 VYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQG 548
Query: 531 LYLCGSGSHPGGGVMGAPGRNAAHVVLQDFK 561
LYLCGSG+HPGGGVMGA GRNAAHV +D K
Sbjct: 549 LYLCGSGAHPGGGVMGAAGRNAAHVAFRDLK 579
>sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1
Length = 581
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 290/574 (50%), Positives = 375/574 (65%), Gaps = 26/574 (4%)
Query: 2 WRR--SFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59
W+R S +NG LK ++DA+VIG GHNGL+AAAYL R G++ AV ERRHVIGGAA
Sbjct: 20 WKRVQSGANGC-----LK-PEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAA 73
Query: 60 VTEELIPGFKFSRCSYLQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDG-------L 112
VTEE+IPGFKFSR SYL SLLRP + +LELKKHGLKL SFTP L+
Sbjct: 74 VTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLKLHLRNPYSFTPMLEEGTLSKPPR 133
Query: 113 YLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHD 172
LLLG D +N +IS+FS++DA +PRYE + + +D LLD+ P +
Sbjct: 134 SLLLGTDVAENQKQISQFSRKDAQAFPRYEEFMKRLVLAIDPLLDAAP-------VDIAA 186
Query: 173 LLRDKMQKSVFWARCLRHVLSLGQ---KDLVDFMDILLSPTTKILNKWFESDVLKATVAA 229
L + + + LR +L G+ L + ++L +P +K+L++WFES+ LKAT+A
Sbjct: 187 LQHGSLLQRLRALSTLRPLLKAGRTLGAQLPQYYEVLTAPISKVLDQWFESEPLKATLAT 246
Query: 230 DAITGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHIL 289
DA+ G+M S H PGSGYVLLHHVMG +G + WS+V+GGMG++S AI+ +AT GA I
Sbjct: 247 DAVIGAMTSPHTPGSGYVLLHHVMGSLEGMQGAWSYVQGGMGALSDAIASSATAHGASIF 306
Query: 290 VNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIK 349
V+++ + G V GV+L G V S VLS A+P TF+ L P++ LP F++ I
Sbjct: 307 TEKTVAKVQVNSEGRVQGVVLQGGEEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRIS 366
Query: 350 YSDYHSGVTKINVAVDKLPQFHCCKSSQL-EVGPHHTATVHIGCESMEEIGSACQDAWNG 408
D S VTKINVAVD+LP F ++ + HH ++H+ CE + A +DA G
Sbjct: 367 QLDTQSPVTKINVAVDRLPNFQAAPNAPGDQPQAHHQCSIHLNCEDTLLLHQAFEDAKGG 426
Query: 409 LPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSL 468
LPS+RP++E+ IPSSLD T++P G HVVSLFTQYTPY + G D + +YA K F
Sbjct: 427 LPSQRPMIELCIPSSLDPTLAPTGCHVVSLFTQYTPYTLAGGKVWDEQKKNTYADKVFDC 486
Query: 469 IDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPV 528
I+ YAPGF SV+G D+LTP DLER FGL GGNIFHGAM LD L+ RPV S YR PV
Sbjct: 487 IEAYAPGFKRSVLGRDILTPQDLERIFGLPGGNIFHGAMSLDQLYFARPVPQHSDYRCPV 546
Query: 529 RGLYLCGSGSHPGGGVMGAPGRNAAHVVLQDFKK 562
+GLYLCGSG+HPGGGVMGA GRNAAH+V +D K
Sbjct: 547 QGLYLCGSGAHPGGGVMGAAGRNAAHIVFRDLKN 580
>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
Length = 580
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 287/571 (50%), Positives = 371/571 (64%), Gaps = 21/571 (3%)
Query: 2 WRRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61
W+R+ S + ++DA+VIG GHNGL+AAAYL R G++ AV ERRHVIGGAAVT
Sbjct: 20 WKRAQSGANGRLK----PEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVT 75
Query: 62 EELIPGFKFSRCSYLQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDG-------LYL 114
EE+IPGFKFSR SYL SLLRP + +LELKKHGLKL SFTP L+ L
Sbjct: 76 EEIIPGFKFSRASYLLSLLRPQICTDLELKKHGLKLHLRDPYSFTPMLEEGTLNRLPRSL 135
Query: 115 LLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPE--ALHGDLSFHD 172
LLG D N EIS+FS++DA +PR E + + +D LLD+ P + A H H
Sbjct: 136 LLGTDMAANQKEISQFSRKDAQAFPR-EEFMKRLVLAIDPLLDAAPVDTTAFH-----HG 189
Query: 173 LLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAI 232
L ++ L+ +LG + L + ++L +P +K+L++WFES+ LKAT+A DA+
Sbjct: 190 SLLQRLGALSTLKPLLKAGRTLGAQ-LPQYCEVLTAPISKVLDQWFESEPLKATLATDAV 248
Query: 233 TGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNT 292
G+M S H PGSGYVLLHHVMG +G + WS+V+GGMG++S AI+ +A GA I
Sbjct: 249 IGAMTSPHTPGSGYVLLHHVMGSLEGTQGAWSYVQGGMGALSDAIASSAATRGASIFTEK 308
Query: 293 EVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSD 352
V+++ + G V GV L DG V S VLS A+P TF+ L P++ LP F++ I D
Sbjct: 309 TVAKVQVNSEGRVQGVTLQDGEEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRISQLD 368
Query: 353 YHSGVTKINVAVDKLPQFHCCKSSQLEVGP-HHTATVHIGCESMEEIGSACQDAWNGLPS 411
S VTKINVAVD+LP F ++ + HH ++H+ CE + A +DA GLPS
Sbjct: 369 TQSPVTKINVAVDRLPNFQAAPNAPGDQPQGHHQCSIHLNCEDTLLLHQAFEDAKGGLPS 428
Query: 412 RRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDE 471
++P++E+ IPSSLD T++PPG HVVSLFTQYTPY + G + + +YA K F I+
Sbjct: 429 QKPMIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKVWNEQEKNTYADKVFDCIEA 488
Query: 472 YAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGL 531
YAPGF SV+ D+LTPPDLER F L GGNIFHGAM LD L+ RPV S YR PV+GL
Sbjct: 489 YAPGFKRSVLARDILTPPDLERIFRLPGGNIFHGAMSLDQLYFARPVPQHSDYRCPVQGL 548
Query: 532 YLCGSGSHPGGGVMGAPGRNAAHVVLQDFKK 562
YLCGSG+HPGGGVMGA GRNAAHVV +D K
Sbjct: 549 YLCGSGAHPGGGVMGAAGRNAAHVVFRDLKN 579
>sp|P64752|Y921_MYCBO Uncharacterized protein Mb0921c OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb0921c PE=4 SV=1
Length = 535
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 248/574 (43%), Gaps = 87/574 (15%)
Query: 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFK--FSRCSY 75
D+ +D +V+GGGHNGL+AAAYLAR GL V +LER GGAAV+ + G + SR SY
Sbjct: 5 DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALSRYSY 64
Query: 76 LQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDGLY---LLLG-FDDQQNNSEISKFS 131
L SLL ++ +L ++L + +S+TP LL+G + + + +
Sbjct: 65 LVSLLPSRIVADLGAP---VRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIGA 121
Query: 132 KRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHV 191
DA + + + C+++ L E L R++ ++ + V
Sbjct: 122 APDAHGFAAFY----RRCRLVTARLWPTLIEPLR--------TREQARRDI--------V 161
Query: 192 LSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPG--SGYVLL 249
G + + ++ P + +D+L+ +A DA+ G+ A +H P L
Sbjct: 162 EYGGHEAAAAWQAMVDEPIGHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFL 221
Query: 250 HHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVL 309
+H++G G +W GGMGSV+ A++ AA + GA I+ +V + + DG +
Sbjct: 222 YHLVG---GGTGVWHVPIGGMGSVTSALATAAARHGAEIVTGADVFAL------DPDGTV 272
Query: 310 LV-----DGTR--VHSSFVLSNATP--YKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKI 360
DG V FVL TP + +G + P K+
Sbjct: 273 RYHSDGSDGAEHLVRGRFVLVGVTPAVLASLLGEPVAALAP-------------GAQVKV 319
Query: 361 NVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNG-----LPSRRPV 415
N+ V +LP+ + + T H+ E+ ++ +A A +G LP
Sbjct: 320 NMVVRRLPRL---RDDSVTPQQAFAGTFHVN-ETWSQLDAAYSQAASGRLPDPLPCEAYC 375
Query: 416 MEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPG 475
+T PS L + G +++F +TP+ G E R + A + ++
Sbjct: 376 HSLTDPSILSARLRDAGAQTLTVFGLHTPHS-VFGDTEGLAERLTAA--VLASLNSVLAE 432
Query: 476 FSSSVIGYDLLTPP--------DLEREFGLTGGNIFHGAMGL----DSLFLMRPVKGWSG 523
V+ D + P DL+R G+TGGNIFHGA+ + L P + W G
Sbjct: 433 PIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADNDDPLDTPARQW-G 491
Query: 524 YRTPVRGLYLCGSGSHPGGGVMGAPGRNAAHVVL 557
T + LCGSG+ GG V G G NAA VL
Sbjct: 492 VATDHERIMLCGSGARRGGAVSGIGGHNAAMAVL 525
>sp|P64751|Y897_MYCTU Uncharacterized protein Rv0897c/MT0921 OS=Mycobacterium
tuberculosis GN=Rv0897c PE=4 SV=1
Length = 535
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 248/574 (43%), Gaps = 87/574 (15%)
Query: 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFK--FSRCSY 75
D+ +D +V+GGGHNGL+AAAYLAR GL V +LER GGAAV+ + G + SR SY
Sbjct: 5 DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALSRYSY 64
Query: 76 LQSLLRPSVIRELELKKHGLKLLKPIATSFTPCLDGLY---LLLG-FDDQQNNSEISKFS 131
L SLL ++ +L ++L + +S+TP LL+G + + + +
Sbjct: 65 LVSLLPSRIVADLGAP---VRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIGA 121
Query: 132 KRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHV 191
DA + + + C+++ L E L R++ ++ + V
Sbjct: 122 APDAHGFAAFY----RRCRLVTARLWPTLIEPLR--------TREQARRDI--------V 161
Query: 192 LSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPG--SGYVLL 249
G + + ++ P + +D+L+ +A DA+ G+ A +H P L
Sbjct: 162 EYGGHEAAAAWQAMVDEPIGHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFL 221
Query: 250 HHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVL 309
+H++G G +W GGMGSV+ A++ AA + GA I+ +V + + DG +
Sbjct: 222 YHLVG---GGTGVWHVPIGGMGSVTSALATAAARHGAEIVTGADVFAL------DPDGTV 272
Query: 310 LV-----DGTR--VHSSFVLSNATP--YKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKI 360
DG V FVL TP + +G + P K+
Sbjct: 273 RYHSDGSDGAEHLVRGRFVLVGVTPAVLASLLGEPVAALAP-------------GAQVKV 319
Query: 361 NVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNG-----LPSRRPV 415
N+ V +LP+ + + T H+ E+ ++ +A A +G LP
Sbjct: 320 NMVVRRLPRL---RDDSVTPQQAFAGTFHVN-ETWSQLDAAYSQAASGRLPDPLPCEAYC 375
Query: 416 MEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPG 475
+T PS L + G +++F +TP+ G E R + A + ++
Sbjct: 376 HSLTDPSILSARLRDAGAQTLTVFGLHTPHS-VFGDTEGLAERLTAA--VLASLNSVLAE 432
Query: 476 FSSSVIGYDLLTPP--------DLEREFGLTGGNIFHGAMGL----DSLFLMRPVKGWSG 523
V+ D + P DL+R G+TGGNIFHGA+ + L P + W G
Sbjct: 433 PIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADNDDPLDTPARQW-G 491
Query: 524 YRTPVRGLYLCGSGSHPGGGVMGAPGRNAAHVVL 557
T + LCGSG+ GG V G G NAA VL
Sbjct: 492 VATDHERIMLCGSGARRGGAVSGIGGHNAAMAVL 525
>sp|P06108|P49_STRLI Protein p49 OS=Streptomyces lividans GN=p49 PE=4 SV=1
Length = 469
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 226/556 (40%), Gaps = 105/556 (18%)
Query: 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEEL-IPGFKFSRCSYLQSL- 79
DA+V+G G NGL AA LAR G VAV E + +GG A TEEL +PGF+ CS L
Sbjct: 3 DAVVVGAGPNGLTAAVELARRGFPVAVFEAQGTVGGGARTEELTLPGFRHDPCSAAHPLG 62
Query: 80 LRPSVIRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYP 139
+ R L L+++GL+ L P P DG +L + + F RDA Y
Sbjct: 63 INSPAFRGLPLERYGLEWLHPGLPMAHPFPDGSAAVL---SRSVGETAASFGARDAGPYR 119
Query: 140 RYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDL 199
R + +F D L RD M S+ R ++L + L
Sbjct: 120 RL---IERFLPRWD------------------TLARDFM--SLPLTALPRDPVTLARFGL 156
Query: 200 VDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYV-----LLHHVMG 254
V L P+T ++ + F + K A G +A + AP G+ L+ +
Sbjct: 157 VG-----LPPSTWLMRR-FRDEKAKTLFA-----GLVAHVMAPLGGFATGAIGLVFALAA 205
Query: 255 ETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT 314
G W GG S+S A++ G + + EV ++ D
Sbjct: 206 HARG----WPVARGGSQSISDALTAYLKDLGGAVHTDYEVKRL--------------DDL 247
Query: 315 RVHSSFVL-SNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSG--VTKINVAVDKLPQFH 371
++VL ++ T GL Y++Y G V KI+ A+D +
Sbjct: 248 PPARAYVLDTSPTALARIAGL------------GSHYANYRYGPSVFKIDYALDGPVPWT 295
Query: 372 CCKSSQLEVGPHHTATVHIGCESMEEIGSACQ-DAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ P TV IG +S EIG+A + RP + PS D T +P
Sbjct: 296 AEE-------PRSAGTVQIGADST-EIGAALHAPSGTDRAPERPFLITVQPSVADPTRAP 347
Query: 431 PGKHVVSLFTQYTPYKPS--DGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTP 488
GKHV F Y + P+ +G D R+ ++ +APGF V+ P
Sbjct: 348 AGKHV---FWAYG-HVPNGWNGDLTDAMERQ---------LERFAPGFRDRVLARATAGP 394
Query: 489 PDL-EREFGLTGGNIFHGAM-GLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMG 546
+L R GG+I GA+ GL L+RP Y TP +++C S + PG GV G
Sbjct: 395 AELAARNANYVGGDISSGAVSGLQ--LLLRPKISLFPYSTPHPAVFICSSATPPGPGVHG 452
Query: 547 APGRNAAHVVLQDFKK 562
G NAA V + ++
Sbjct: 453 MSGHNAAKAVWRRLRQ 468
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 226/571 (39%), Gaps = 94/571 (16%)
Query: 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS 78
+++DA+VIG G GL+AA LA G V VLE+ + GG++ + GF F S +
Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQR-DGFTFDVGSSVMF 126
Query: 79 LLRPS-----VIRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKR 133
+ + LE L+ + T D L + + + SE+ +
Sbjct: 127 GFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIRVHREYDMFISELVNYFPH 186
Query: 134 DADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLS 193
+ + R+ NE K ++ L E ++ F R ++ CL
Sbjct: 187 EKEGIRRFYNECWKIFNSLNSLELKSLEEPMY---LFGQFFRKPVE-------CLTLAFY 236
Query: 194 LGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA-ITGSMASIHAPGSGYVLLHHV 252
L Q I K+ + L + + A+ I ++ ++H P +++
Sbjct: 237 LPQN------------AGDIARKFIKDPQLLSFIDAECFIVSTVKALHTP-----MINAS 279
Query: 253 MGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD 312
M D ++ GG+G ++ A++ G+ +L V++I++ D G+ GV L +
Sbjct: 280 MVLCDRHFGGINYPVGGVGGIAKALANGLVNKGSKLLYKANVTKILLKD-GKAVGVKLSN 338
Query: 313 GTRVHSSFVLSNATPYKTFMGLVPRDVLPDD-------FLRAIKYSDYHSGVTKINVAVD 365
G + V+SNAT + TF L+ + +P + +L+A + H GV +
Sbjct: 339 GREFFAKTVISNATRWDTFGKLLKVEDIPQEEKNFKKIYLKAPSFLSIHMGVKAFVLP-- 396
Query: 366 KLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLD 425
P C HH +D W L + ++IP+ LD
Sbjct: 397 --PDTDC----------HHFI---------------LEDNWGRLELPYGSIFLSIPTVLD 429
Query: 426 KTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYA--------PGFS 477
+++P G H+ +FT S +WE +++E Y +K + DE PG
Sbjct: 430 PSLAPEGHHIFHIFTT-----SSIENWEGLSHKE-YEEKKELVADEIITRLEKKLFPGLK 483
Query: 478 SSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSG 537
SV+ ++ TP R G +G M + + + G T + GLY G
Sbjct: 484 DSVVLKEVGTPKTHRRFLARDSGT--YGPMPRK---VPKGLLGMPFNTTAINGLYCVGDS 538
Query: 538 SHPGGGVMGAP--GRNAAHVVLQD--FKKQS 564
PG GV+ G AH V D F+K++
Sbjct: 539 CFPGQGVIAVAFSGVMCAHRVAADLGFEKKA 569
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 129/570 (22%), Positives = 223/570 (39%), Gaps = 92/570 (16%)
Query: 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS 78
+++DA+VIG G GL+AA LA G V VLE+ + GG++ + GF F S +
Sbjct: 68 EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQR-DGFTFDVGSSVMF 126
Query: 79 LLRPS-----VIRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKR 133
+ + LE L+ + T D L + + + SE+ +
Sbjct: 127 GFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIRVHREYDMFISELVNYFPH 186
Query: 134 DADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLS 193
+ + R+ NE K ++ L E ++ F R ++ CL
Sbjct: 187 EKEGIRRFYNECWKIFNSLNSLELKSLEEPMY---LFGQFFRKPVE-------CLTLAYY 236
Query: 194 LGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA-ITGSMASIHAPGSGYVLLHHV 252
L Q I K+ + L + + A+ I ++ ++H P +++
Sbjct: 237 LPQN------------AGDIARKFIKDPQLLSFIDAECFIVSTVKALHTP-----MINAS 279
Query: 253 MGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD 312
M D ++ GG+G ++ A++ G+ +L V++I++ D G+ GV L +
Sbjct: 280 MVLCDRHFGGINYPVGGVGGIAKALANGLVNKGSKLLYKANVTKILLKD-GKAVGVKLSN 338
Query: 313 GTRVHSSFVLSNATPYKTFMGLVPRDVLPDD-------FLRAIKYSDYHSGVTKINVAVD 365
G + V+SNAT + TF L+ + +P + +L+A + H GV +
Sbjct: 339 GREFFAKTVISNATRWDTFGKLLKVEDIPQEEKNFKKIYLKAPSFLSIHMGVKAFVLP-- 396
Query: 366 KLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLD 425
P C HH +D W L + ++IP+ LD
Sbjct: 397 --PDTDC----------HHFI---------------LEDNWGRLELPYGSIFLSIPTVLD 429
Query: 426 KTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYA--------PGFS 477
+++P G H+ +FT S +WE +++E Y +K + DE PG
Sbjct: 430 PSLAPEGHHIFHIFTT-----SSIENWEGLSHKE-YEEKKELVADEIITRLEKKLFPGLK 483
Query: 478 SSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSG 537
SV+ ++ TP R G +G M + + + G T + GLY G
Sbjct: 484 DSVVLKEVGTPKTHRRFLARDSGT--YGPMPRK---VPKGLLGMPFNTTAINGLYCVGDS 538
Query: 538 SHPGGGVMGAP--GRNAAHVVLQDFKKQSR 565
PG GV+ G AH V D + +
Sbjct: 539 CFPGQGVIAVAFSGVMCAHRVAADLGIEKK 568
>sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum
GN=CRTISO PE=1 SV=1
Length = 615
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 48/310 (15%)
Query: 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATP 327
GG+G ++ +++K G+ IL V+ I++ D+G+ GV L DG + ++ ++SNAT
Sbjct: 323 GGVGEIAKSLAKGLDDHGSQILYRANVTSIIL-DNGKAVGVKLSDGRKFYAKTIVSNATR 381
Query: 328 YKTFMGLVPRDVLPDD-------FLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEV 380
+ TF L+ + LP + +++A + H GV D LP C
Sbjct: 382 WDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVK-----ADVLPPDTDC------- 429
Query: 381 GPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFT 440
HH +D W L + ++IP+ LD +++P G H++ +FT
Sbjct: 430 --HHF---------------VLEDDWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFT 472
Query: 441 QYTPYKPSDGSWED-PTYRESYAQKCFSLIDE-YAPGFSSSVIGYDLLTPPDLEREFGLT 498
+ S +D +E A++ S +++ PG SS++ ++ TP R
Sbjct: 473 TSSIEDWEGLSPKDYEAKKEVVAERIISRLEKTLFPGLKSSILFKEVGTPKTHRRYLARD 532
Query: 499 GGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGAP--GRNAAHVV 556
G G L P T + GLY G PG GV+ G AH V
Sbjct: 533 SGTYGPMPRGTPKGLLGMPFN-----TTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRV 587
Query: 557 LQD--FKKQS 564
D F+K+S
Sbjct: 588 AADLGFEKKS 597
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 3 RRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTE 62
+R S G S + +DA+VIG G GL+AA LA G V VLE+ + GG++
Sbjct: 80 KRVESYGSSDVEGNESGSYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFY 139
Query: 63 ELIPGFKF 70
E G+KF
Sbjct: 140 ER-DGYKF 146
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 129/570 (22%), Positives = 220/570 (38%), Gaps = 114/570 (20%)
Query: 24 LVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPS 83
+VIG G GL A L G+ +LE+R GG A GF F + + P+
Sbjct: 5 VVIGAGFGGLALAIRLQAAGIPTVLLEQRDKPGGRAYVWH-DQGFTFDAGPTV--ITDPT 61
Query: 84 VIRELELKKHGLKL-----LKPIATSFTPCLD-GLYLLLGFDDQQNNSEISKFSKRDADT 137
+ L G ++ L P+ + C + G L D + ++I++F+ RD +
Sbjct: 62 ALEAL-FTLAGRRMEDYVRLLPVKPFYRLCWESGKTLDYANDSAELEAQITQFNPRDVEG 120
Query: 138 YPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLR--DKMQKSVFWARCLRHVLSLG 195
Y R+ + L S P LSF D+LR ++ K W + V
Sbjct: 121 YRRFLAYSQAVFQEGYLRLGSVP------FLSFRDMLRAGPQLLKLQAWQSVYQSV---- 170
Query: 196 QKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMGE 255
+++ E + L+ + ++ + S Y L+H + E
Sbjct: 171 -------------------SRFIEDEHLRQAFSFHSLLVG-GNPFTTSSIYTLIHALERE 210
Query: 256 TDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTR 315
+W EGG G++ + K T G I +N V ++++ D+ V V L DG
Sbjct: 211 W----GVW-FPEGGTGALVNGMVKLFTDLGGEIELNARVEELVVADN-RVSQVRLADGRI 264
Query: 316 VHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKS 375
+ V SNA T+ L+ + A++ + + + +++
Sbjct: 265 FDTDAVASNADVVNTYKKLLGHHPVGQKRAAALERKSMSNSLFVLYFGLNQ--------- 315
Query: 376 SQLEVGPHHTATVHIGC------ESMEEI--GSACQDAWNGLPSRRPVMEMTIPSSLDKT 427
PH H C E ++EI GSA D ++ + + P D +
Sbjct: 316 ------PHSQLAHHTICFGPRYRELIDEIFTGSALADDFS--------LYLHSPCVTDPS 361
Query: 428 ISPPGKHVVSLFTQYTPY-----KPSDGSWEDPTYRESYAQKCFSLIDE-YAPGFSSSVI 481
++PPG + F P P D + E P R+ + F ++E Y PG S ++
Sbjct: 362 LAPPG---CASFYVLAPVPHLGNAPLDWAQEGPKLRD----RIFDYLEERYMPGLRSQLV 414
Query: 482 GYDLLTPPDLEREFGLTGGNIFHGAMG--LDSLFLMRPVKGWSGYRTP------VRGLYL 533
+ TP D FH + L S F + P+ S + P + LYL
Sbjct: 415 TQRIFTPAD------------FHDTLDAHLGSAFSIEPLLTQSAWFRPHNRDSDIANLYL 462
Query: 534 CGSGSHPGGGVMG--APGRNAAHVVLQDFK 561
G+G+HPG G+ G A + A ++++D +
Sbjct: 463 VGAGTHPGAGIPGVVASAKATASLMIEDLQ 492
>sp|P21685|CRTI_PANAN Phytoene desaturase (lycopene-forming) OS=Pantoea ananas GN=crtI
PE=1 SV=1
Length = 492
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 227/561 (40%), Gaps = 100/561 (17%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL A L G+ V +LE+R GG A E GF F + + PS
Sbjct: 6 VIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTV--ITDPSA 62
Query: 85 IREL------ELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQN--NSEISKFSKRDAD 136
I EL +LK++ ++LL P+ + C + + +D+ Q ++I +F+ RD +
Sbjct: 63 IEELFALAGKQLKEY-VELL-PVTPFYRLCWESGKVF-NYDNDQTRLEAQIQQFNPRDVE 119
Query: 137 TYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRD--KMQKSVFWARCLRHVLSL 194
Y ++ + K L + P LSF D+LR ++ K W V S
Sbjct: 120 GYRQFLDYSRAVFKEGYLKLGTVP------FLSFRDMLRAAPQLAKLQAWRSVYSKVAS- 172
Query: 195 GQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ E + L+ + ++ + A S Y L+H +
Sbjct: 173 ----------------------YIEDEHLRQAFSFHSLLVG-GNPFATSSIYTLIHAL-- 207
Query: 255 ETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT 314
+ + +W GG G++ + K G +++N VS M +++ V L DG
Sbjct: 208 --EREWGVW-FPRGGTGALVQGMIKLFQDLGGEVVLNARVSH-METTGNKIEAVHLEDGR 263
Query: 315 RVHSSFVLSNATPYKTFMGLV---PRDVLPDDFLRAIKYSD-YHSGVTKINVAVDKLPQF 370
R + V SNA T+ L+ P V + L+ + S+ +N D+L
Sbjct: 264 RFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHH 323
Query: 371 HCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
C GP + E ++EI + +GL + + + P D +++P
Sbjct: 324 TVC------FGPRYR-------ELIDEIFNH-----DGL-AEDFSLYLHAPCVTDSSLAP 364
Query: 431 PGKHVVSLFTQYTPYKPSDGSW--EDPTYRESYAQKCFSLIDE-YAPGFSSSVIGYDLLT 487
G + ++ W E P R+ + F+ +++ Y PG S ++ + + T
Sbjct: 365 EGCGSYYVLAPVPHLGTANLDWTVEGPKLRD----RIFAYLEQHYMPGLRSQLVTHRMFT 420
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D + N +HG S F + PV S + P + LYL G+G+HPG
Sbjct: 421 PFDFRDQL-----NAYHG-----SAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG 470
Query: 542 GGVMGAPG--RNAAHVVLQDF 560
G+ G G + A ++L+D
Sbjct: 471 AGIPGVIGSAKATAGLMLEDL 491
>sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO
PE=2 SV=1
Length = 615
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 46/309 (14%)
Query: 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATP 327
GG+G ++ +++K G+ I V I++ ++G+ GV L +G + + ++SNAT
Sbjct: 323 GGVGGIAKSLAKGLVDQGSEIQYKANVKSIIV-ENGKAVGVRLANGNEIFAKNIISNATR 381
Query: 328 YKTFMGLVPRDVLPDD-------FLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEV 380
+ TF L+ +D LP + +++A + H GV D LP C
Sbjct: 382 WDTFGKLLKQDELPKEEENFQKLYIKAPSFLSIHLGVKS-----DVLPPDTDC------- 429
Query: 381 GPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFT 440
HH +D W+ L + ++IP+ LD +++P G H++ +FT
Sbjct: 430 --HHFV---------------LEDDWSNLEVPYGSIFLSIPTVLDSSLAPEGNHILHIFT 472
Query: 441 QYTPYKPSDGSWED-PTYRESYAQKCFSLID-EYAPGFSSSVIGYDLLTPPDLEREFGLT 498
+ S +D +E A + S ++ + PG SS++ ++ TP R
Sbjct: 473 TSSIEDWQGMSQKDYEKKKELVADEIISRLEKKLFPGLQSSIVLKEVGTPKTHRRYLARD 532
Query: 499 GGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGAP--GRNAAHVV 556
G G L P T + GLY G PG GV+ G AH V
Sbjct: 533 SGTYGPMPQGTPKGLLGMPFN-----TTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRV 587
Query: 557 LQDFKKQSR 565
D + +
Sbjct: 588 AADLGLEQK 596
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 17 KDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59
+ +++DA+VIG G GL+AA LA G V VLE+ + GG++
Sbjct: 94 RSREYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYLIPGGSS 136
>sp|Q9M9Y8|CRTSO_ARATH Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana
GN=CRTISO PE=2 SV=2
Length = 595
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 126/318 (39%), Gaps = 62/318 (19%)
Query: 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATP 327
GG+G ++ ++++ G+ I V I++ D G+ GV L DG + ++SNAT
Sbjct: 303 GGVGGIAKSLAEGLVDQGSEIQYKANVKSIIL-DHGKAVGVRLADGREFFAKTIISNATR 361
Query: 328 YKTFMGLVPRDVLPDD-------FLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEV 380
+ TF L+ + LP + +++A + H GV + EV
Sbjct: 362 WDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGV-------------------KAEV 402
Query: 381 GPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFT 440
P T H +D W L + ++IP+ LD +++P G+H++ +FT
Sbjct: 403 LPPDTDCHHF----------VLEDDWKNLEEPYGSIFLSIPTILDSSLAPDGRHILHIFT 452
Query: 441 QYT-------PYKPSDGSWEDPTYR--ESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDL 491
+ P K + ED R + +K F PG SSS+ ++ TP
Sbjct: 453 TSSIEDWEGLPPKEYEAKKEDVAARIIQRLEKKLF-------PGLSSSITFKEVGTPRTH 505
Query: 492 EREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGAP--G 549
R G G L P T + GLY G PG GV+ G
Sbjct: 506 RRFLARDKGTYGPMPRGTPKGLLGMPFN-----TTAIDGLYCVGDSCFPGQGVIAVAFSG 560
Query: 550 RNAAHVVLQD--FKKQSR 565
AH V D +K+SR
Sbjct: 561 VMCAHRVAADIGLEKKSR 578
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59
+DA+VIG G GL+AA LA V VLE+ + GG++
Sbjct: 78 YDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIPGGSS 116
>sp|P48537|CRTI_CERNC Phytoene desaturase OS=Cercospora nicotianae GN=PDH1 PE=3 SV=1
Length = 621
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 172/430 (40%), Gaps = 68/430 (15%)
Query: 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELI--PGFKFSRCSYL 76
K+ A+VIG G G+ AA LAR G V VLE+ + GG LI G++F + L
Sbjct: 6 KRPTAIVIGSGVGGVSTAARLARAGFHVTVLEKNNFTGGRC---SLIHHEGYRFDQGPSL 62
Query: 77 QSLLRP--SVIREL--ELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSK 132
L EL L++ G+KLLK DG L D +E+ K+
Sbjct: 63 LLLPGLFHRTFAELGTSLEQEGVKLLKCEPNYMIHFSDGEKFTLSSDLSVMKTEVEKWEG 122
Query: 133 RDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQ--KSVFWARCLRH 190
++ Y RY ++FL +S H +LS ++L + ++ LRH
Sbjct: 123 KEG--YTRY----------LEFLKESHG----HYELSVREVLLRNFEGLTAMLRPEFLRH 166
Query: 191 VLSLGQKDLVDFMDILLSPTTKILN---KWFESDVLKATVAADAITGSMASIHAPGSGYV 247
+L L P I K+F ++ L+ ++ M+ APG+ Y
Sbjct: 167 LLQ-------------LHPFESIWTRAGKYFWTERLRRVFTFGSMYMGMSPFDAPGT-YS 212
Query: 248 LLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEV-D 306
LL + T+ +W V GG V A+ K + G + T V +I++ + G V
Sbjct: 213 LLQY----TELAEGIWYPV-GGFHRVVEALVKIGEREGVDFRMETAVKKILLSEDGGVAK 267
Query: 307 GVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDK 366
GV L DG R+ + V++N+ + L+P + + ++K A+D+
Sbjct: 268 GVELEDGRRLEADVVVNNSDLVYAYEKLLP---IKTPYAESLKGRPGSCSSISFYWALDR 324
Query: 367 LPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDK 426
+V + + E E S + L P + +PS +D
Sbjct: 325 ------------QVPELEAHNIFLADEYRESFDSIFK---KHLIPDEPSFYVNVPSRVDS 369
Query: 427 TISPPGKHVV 436
T +P GK V
Sbjct: 370 TAAPEGKDSV 379
>sp|P21334|CRTI_NEUCR Phytoene desaturase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=al-1
PE=1 SV=1
Length = 595
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/549 (20%), Positives = 207/549 (37%), Gaps = 77/549 (14%)
Query: 39 LARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSVIRE------LELKK 92
LA+ G+ V VLE+ GG G++F + L L + RE L++
Sbjct: 26 LAKAGVDVTVLEKNDFTGGRCSLIHTKAGYRFDQGPSLLLLP--GLFRETFEDLGTTLEQ 83
Query: 93 HGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIM 152
++LL+ DG D+ EI K+ D + RY + L++
Sbjct: 84 EDVELLQCFPNYNIWFSDGKRFSPTTDNATMKVEIEKWE--GPDGFRRYLSWLAE----- 136
Query: 153 DFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTK 212
G + LR + R + +L L LV + + L P
Sbjct: 137 -------------GHQHYETSLRHVLH------RNFKSILELADPRLVVTLLMALHPFES 177
Query: 213 ILN---KWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGG 269
I + ++F++D ++ + M+ AP + +L + + E +W + GG
Sbjct: 178 IWHRAGRYFKTDRMQRVFTFATMYMGMSPFDAPATYSLLQYSELAE-----GIW-YPRGG 231
Query: 270 MGSVSLAISKAATKAGAHILVNTEVSQIMI-----GDSGEVDGVLLVDGTRVHSSFVLSN 324
V A+ K + G +NT VSQ++ G + GV L +G +++ V+ N
Sbjct: 232 FHKVLDALVKIGERMGVKYRLNTGVSQVLTDGGKNGKKPKATGVQLENGEVLNADLVVVN 291
Query: 325 ATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHH 384
A T+ L+P+++ IK Y + + + + + E+ H+
Sbjct: 292 ADLVYTYNNLLPKEI------GGIK--KYANKLNNRKASCSSISFYWSLSGMAKELETHN 343
Query: 385 TATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKH-VVSLFTQYT 443
ES + I LP P + +PS +D + +PP + V++L
Sbjct: 344 IFLAEEYKESFDAIFER-----QALPD-DPSFYIHVPSRVDPSAAPPDRDAVIALVPVGH 397
Query: 444 PYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLL-TPPDLEREFGLTGGNI 502
+ + PT + I S +I +++ TP E +F L+ G I
Sbjct: 398 LLQNGQPELDWPTLVSKARAGVLATIQARTGLSLSPLITEEIVNTPYTWETKFNLSKGAI 457
Query: 503 FHGAMGLDSLFLMRPVKGWSGYRTPVRGL---YLCGSGSHPGGG---VMGAPGRNAAHVV 556
A ++ RP RT +G+ Y G+ +HPG G V+ A ++
Sbjct: 458 LGLAHDFFNVLAFRP-------RTKAQGMDNAYFVGASTHPGTGVPIVLAGAKITAEQIL 510
Query: 557 LQDFKKQSR 565
+ F K ++
Sbjct: 511 EETFPKNTK 519
>sp|Q5HCY9|CRTN_STAAC Dehydrosqualene desaturase OS=Staphylococcus aureus (strain COL)
GN=crtN PE=3 SV=1
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGC-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q7A3E2|CRTN_STAAN Dehydrosqualene desaturase OS=Staphylococcus aureus (strain N315)
GN=crtN PE=1 SV=1
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q99R76|CRTN_STAAM Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtN PE=3 SV=1
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|O07855|CRTN_STAAE Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Newman)
GN=crtN PE=1 SV=2
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q2FV60|CRTN_STAA8 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtN PE=3 SV=1
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q2FDU6|CRTN_STAA3 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain USA300)
GN=crtN PE=3 SV=1
Length = 502
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q8NUQ6|CRTN_STAAW Dehydrosqualene desaturase OS=Staphylococcus aureus (strain MW2)
GN=crtN PE=3 SV=1
Length = 502
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q6G6B3|CRTN_STAAS Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MSSA476) GN=crtN PE=3 SV=1
Length = 502
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 206/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F D T P E
Sbjct: 62 YKDV----------------FTACGKNYEDYIELRQLRYIYDVY-FDHDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L + +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQQ-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|P17054|CRTI_RHOCB Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=crtI PE=1 SV=1
Length = 524
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 26/282 (9%)
Query: 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATP 327
GG+ +++ A++K T G + +NTEV +I++ G+ G+ L+DGT + + V+SNA
Sbjct: 225 GGVQAIADAMAKVITDQGGEMRLNTEVDEILVSRDGKATGIRLMDGTELPAQVVVSNADA 284
Query: 328 ---YKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHH 384
YK + R D+ L ++S + + V K + +VG H
Sbjct: 285 GHTYKRLLRNRDRWRWTDEKLDKKRWS--------MGLFVWYFGTKGTAKMWK-DVGHH- 334
Query: 385 TATVHIGCESMEEIGSACQDAW-NGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYT 443
TV +G E + QD + G + + + PS D T +P G + +
Sbjct: 335 --TVVVGPRYKEHV----QDIFIKGELAEDMSLYVHRPSVTDPTAAPKGDDTFYVLSP-V 387
Query: 444 PYKPSDGSWEDPTYRESYAQKCFSLIDE-YAPGFSSSVIGYDLLTPPDLEREFGLTGGNI 502
P D + E Y K +I+E PG + + + TP + G
Sbjct: 388 PNLGFDNGVDWSVEAEKYKAKVLKVIEERLLPGVAEKITEEVVFTPETFRDRYLSPLGAG 447
Query: 503 FHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGV 544
F + RP V GLYL G+G+HPG GV
Sbjct: 448 FSLEPRILQSAWFRP----HNASEEVDGLYLVGAGTHPGAGV 485
>sp|Q2YWE8|CRTN_STAAB Dehydrosqualene desaturase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtN PE=3 SV=1
Length = 502
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 107/543 (19%), Positives = 205/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNTNVGGR-MNQLKKDGFTFDMGPTI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F + D T P E
Sbjct: 62 YKDV----------------FTMCGKNYEDYIELRQLRYIYDVY-FDRDDRITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQH-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
GK + + K G W D + + + + E S ++ + T
Sbjct: 368 EGKTGIYVLMPTPELKTGSGIDWSDEALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|Q6GDN7|CRTN_STAAR Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MRSA252) GN=crtN PE=3 SV=1
Length = 502
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/543 (19%), Positives = 205/543 (37%), Gaps = 90/543 (16%)
Query: 25 VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSV 84
VIG G GL AAA +A G V + E+ + +GG + + GF F + ++ P V
Sbjct: 5 VIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGR-MNQLKKDGFTFDMGPAI--VMMPDV 61
Query: 85 IRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENE 144
+++ FT C + + ++ F + D T P E
Sbjct: 62 YKDV----------------FTMCGKNYEDYIELRQLRYIYDVY-FDRDDCITVPTDLAE 104
Query: 145 LSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMD 204
L +L+S P + HG +SF L D +K + R+ L + DF +
Sbjct: 105 LQH-------MLESIEPGSTHGFMSF---LTDVYKK---YEIARRYFLERTYRKPSDFYN 151
Query: 205 IL----------LSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254
+ L+ +++ + +++ ++ +A + + P S Y ++ +
Sbjct: 152 MTSLVQGAKLKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGP-SLYSIIPMI-- 208
Query: 255 ETDGDRNLWSH-VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG 313
+ H ++GGM ++ +++ G +I +N E+ QI+I + + V+G
Sbjct: 209 ----EMMFGVHFIKGGMYGMAQGLAQLNKDLGVNIELNAEIEQIIIDPKFKRADAIKVNG 264
Query: 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCC 373
+L A L+P DF KY + + ++ + C
Sbjct: 265 DIRKFDKILCTADFPSVAESLMP------DFAPIKKYPPHK--IADLD---------YSC 307
Query: 374 KSSQLEVGPHHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISP 430
+ + +G T + ++ ++ ++ + G S P + + +P+ DK+++P
Sbjct: 308 SAFLMYIGIDIDVTDQVRLHNVIFADDFRGNIEEIFEGRLSHDPSIYVYVPAVADKSLAP 367
Query: 431 PGKHVVSLFTQYTPYKPSDG-SWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLT 487
G+ + + K G W D + + + E S ++ + T
Sbjct: 368 QGQTGIYVLMPTPELKTGSGIDWSDEALTDQIKDVIYRKLATIEVFEDIKSHIVSETIFT 427
Query: 488 PPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSGSHPG 541
P D E+ +H G S F + P S Y P + LY G+ +HPG
Sbjct: 428 PNDFEQ--------TYHAKFG--SAFGLMPTLAQSNYYRPQNVSRDYKDLYFAGASTHPG 477
Query: 542 GGV 544
GV
Sbjct: 478 AGV 480
>sp|P54982|CRTI_PHYB8 Phytoene desaturase OS=Phycomyces blakesleeanus (strain ATCC 8743b
/ FGSC 10004 / NBRC 33097 / NRRL 1555) GN=carB PE=3 SV=1
Length = 583
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 139/339 (41%), Gaps = 41/339 (12%)
Query: 216 KWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSL 275
K+F++ ++ ++ M+ +P +++++ T+ +W + +GG +V
Sbjct: 178 KYFKTKKMRMAFTFQSMYMGMSPYDSPA-----VYNLLQYTEFAEGIW-YPKGGFNTVIQ 231
Query: 276 AISKAAT-KAGAHILVNTEVSQIMIGDSGE-VDGVLLVDGTRVHSSFVLSNATPYKTFMG 333
+ AT K GA + V++I D G+ V GV L G + + V+ NA +
Sbjct: 232 KLENIATEKFGARFIYEAPVAKINTDDKGKKVTGVTLQSGEVIEADAVVCNADLVYAYHN 291
Query: 334 LVP-----RDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATV 388
L+P + L + L + S Y S K E+ H+
Sbjct: 292 LLPPCRWTTNTLAEKKLTSSSISFYWS-----------------LKRVVPELDVHNIFLA 334
Query: 389 HIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPS 448
ES +EI + + +PS + +PS +D T +PPGK + + K
Sbjct: 335 EAFKESFDEIFTD-----HKMPSELSFY-VNLPSRIDPTAAPPGKDSMIVLVPIGHMKSK 388
Query: 449 DGSWEDPTYRESYAQKCFSLIDEYAPGFSSSV--IGYDLLTPPDL-EREFGLTGGNIFHG 505
ED T A+K + E G ++ + + ++ + P + +++F L G+I
Sbjct: 389 TNEAEDYTMIVKRARKMVLEVLERRLGLTNFIDLVEHEEVNDPSIWQKKFNLWRGSILGL 448
Query: 506 AMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGV 544
+ + + RP S R + L+ G+ +HPG GV
Sbjct: 449 SHDVLQVLWFRPSTQDSTGR--YKNLFFVGASTHPGTGV 485
>sp|Q5BLE8|RETST_DANRE Putative all-trans-retinol 13,14-reductase OS=Danio rerio GN=retsat
PE=2 SV=1
Length = 607
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 217/549 (39%), Gaps = 85/549 (15%)
Query: 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSR-CSYLQSLL 80
DA+V+G G GL A LA+ G V VLE+ GG T + GF+F Y+ L
Sbjct: 64 DAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFKE-QGFEFDVGIHYIGELS 122
Query: 81 RPSVIR-ELELKKHGLKLLKPIATSFTPCLDG------LYLLLGFDDQQNNSEISKF--- 130
+R ++ +G P+ F + G +Y + ++ E+ K
Sbjct: 123 NHKPLRCIIDQMTNGQLQWDPLENPFDNVVIGPPENRRIYQIYS-GRKRYMDELKKCFPG 181
Query: 131 SKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRH 190
++ D Y R E+ + +M L P P A + L+R +
Sbjct: 182 EEKAIDEYVRLCKEVGQGVWVMVLLKFLPTPIA-------NFLVRTGLANR--------- 225
Query: 191 VLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGS----GY 246
L F T ++N+ ++ L+A ++ I G+ I S
Sbjct: 226 --------LTSFSRYASRSLTDVVNELTQNKDLRAVLSY--IFGTYGKIPKEASFSMHSL 275
Query: 247 VLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVD 306
++ H++ G W + +GG ++ + KAG +LV V++I++ D+ E
Sbjct: 276 IVNHYMNGA-------W-YPKGGATEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAI 327
Query: 307 GVLLVDGTR---VHSSFVLSNATPYKTFMGLVPRDV--LP--DDFLRAIKYSDYHSGVTK 359
GV ++ G V + V+S+A + T+ L+P+DV +P L +++ D SG++
Sbjct: 328 GVSVLKGQEEVHVRAPIVISDAGIFNTYEYLLPKDVQTMPAIQKQLSMLQHGD--SGLS- 384
Query: 360 INVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMT 419
I + +D + K+ + P + E +E+ S ++ + P++ +
Sbjct: 385 IFIGLDGTKEELGLKADNYFIYPENNID-----ELLEDYRSGNREE---SAKKNPLIFVA 436
Query: 420 IPSSLDKTI--SPPGKHVVSL--------FTQYTPYKPSDGSWEDPTYRESYAQKCFSLI 469
PS+ D T PGK +++ F ++ K + S + +E + +
Sbjct: 437 SPSAKDSTWPERTPGKSTLTVVSFANYEWFEEWKDDKVKNRSTDYKQLKELFINYILEAV 496
Query: 470 DEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLD--SLFLMRPVKGWSGYRTP 527
E P + D TP + G I+ G+ S L ++ +TP
Sbjct: 497 TEIYPKIKDRIEYVDAGTPITNQHYIAAPRGEIYGADHGIPRFSAELNATIRA----QTP 552
Query: 528 VRGLYLCGS 536
++ LYL G
Sbjct: 553 IKNLYLTGQ 561
>sp|P54978|CRTI_PARSN Phytoene desaturase (lycopene-forming) OS=Paracoccus sp. (strain
N81106 / MBIC 01143) GN=crtI PE=3 SV=2
Length = 501
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 124/325 (38%), Gaps = 44/325 (13%)
Query: 246 YVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEV 305
Y L+H + E G +W +GG + + + G +L+N +V++I D
Sbjct: 208 YALIHAL--ERRG--GVW-FAKGGTNQLVAGMVALFERLGGQMLLNAKVARIDT-DGPRA 261
Query: 306 DGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVD 365
GV L DG + + V SN + L+ +++ + + ++ +
Sbjct: 262 TGVTLADGRALTADMVASNGDVMHNYRDLLGHTARGQSRAKSLNAKRWSMSLFVLHFGLR 321
Query: 366 KLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLD 425
+ P+ + GP + E + EI + A + + + P + D
Sbjct: 322 EAPK--DVAHHTILFGPRYK-------ELVNEIFKGPKLAEDF------SLYLHSPCTTD 366
Query: 426 KTISPPGKHVVSLFTQYTPYKPSDGSW--EDPTYRESYAQKCFSLIDEYAPGFSSSVIGY 483
++PPG + +D W E P Y + + SL + P +++
Sbjct: 367 PEMAPPGMSTHYVLAPVPHLGRADIDWAVEGPRYAD---RILASLEERLIPNLRANLTTT 423
Query: 484 DLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTP------VRGLYLCGSG 537
+ TP D E N HG S F + P+ S + P +R YL G+G
Sbjct: 424 RIFTPSDFASEL-----NAHHG-----SAFSVEPILTQSAWFRPHNRDKTIRNFYLVGAG 473
Query: 538 SHPGGGVMGAPG--RNAAHVVLQDF 560
+HPG G+ G G + A V+L D
Sbjct: 474 THPGAGIPGVVGSAKATAQVMLSDL 498
>sp|Q8VHE9|RETST_RAT All-trans-retinol 13,14-reductase OS=Rattus norvegicus GN=Retsat
PE=2 SV=1
Length = 609
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 161/445 (36%), Gaps = 67/445 (15%)
Query: 3 RRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT- 61
++ S++R +K DA+VIG G GL +AA LA+ G V VLE+ GG T
Sbjct: 51 KKVLKQAFSVSRV--PEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTF 108
Query: 62 -EELIPGFKFSRCSYLQSLLRPSVIRELELKK--HGLKLLKPIATSFTPCLDGLYLLLGF 118
E G +F + +R I L + G P+A+ F L+
Sbjct: 109 GEN---GLEFDTGIHYIGRMREGNIGRFILDQITEGQLDWAPMASPFD--------LMIL 157
Query: 119 DDQQNNSEISKFSKRD------ADTYPRYENELSKFCKIMDFLLDSPPPEALHG--DLSF 170
+ E +S R + +P+ E + K+ +++ + L L
Sbjct: 158 EGPNGRKEFPMYSGRKEYIQGLKEKFPKEEAVIDKYMELVKVVAHGVSHAILLKFLPLPL 217
Query: 171 HDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD 230
LL + F C SL + +L + S L+A ++
Sbjct: 218 TQLLNKFGLLTRFSPFCRASTQSLAE----------------VLKQLGASPELQAVLSYI 261
Query: 231 AITGSMASIHAPGSGYVLL--HHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHI 288
T + H S + LL H++ G R G ++ +AG +
Sbjct: 262 LPTYGVTPSHTTFSLHALLVDHYIQGAYYPRR--------GSSEIAFHTIPLIQRAGGAV 313
Query: 289 LVNTEVSQIMIGDSGEVDGVLLVDG---TRVHSSFVLSNATPYKTFMGLVPRDV--LPDD 343
L V +++ +G GV + G ++ V+SNA + T+ L+P V LP
Sbjct: 314 LTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAGMFNTYQHLLPESVRYLP-- 371
Query: 344 FLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTA-TVHIGCESMEEIGSAC 402
D +T + + L F C K ++ E+ T V+ + + +
Sbjct: 372 --------DVKKQLTMVKPGLSMLSIFICLKGTKEELKLQSTNYYVYFDTDMDKAMECYV 423
Query: 403 QDAWNGLPSRRPVMEMTIPSSLDKT 427
P P++ + PSS D T
Sbjct: 424 SMPKEKAPEHIPLLFIPFPSSKDPT 448
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase
YdiS OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 16 LKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLER------RHVIGG---AAVTEELIP 66
+ D K+DA+V+G G G +AA +AR GL V V+ER +++ GG A E +IP
Sbjct: 1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP 60
Query: 67 GFKFS 71
GF S
Sbjct: 61 GFAVS 65
>sp|Q64FW2|RETST_MOUSE All-trans-retinol 13,14-reductase OS=Mus musculus GN=Retsat PE=1
SV=3
Length = 609
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 133/359 (37%), Gaps = 56/359 (15%)
Query: 3 RRSFSNGVSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT- 61
++ S++R +K DA+VIG G GL +AA LA+ G V VLE+ GG T
Sbjct: 51 KKVLKQAFSVSRV--PEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTF 108
Query: 62 -EELIPGFKFSRCSYLQSLLRPSVIRELELKK--HGLKLLKPIATSFTPCLDGLYLLLGF 118
E G +F + +R I L + G P+A+ F L+
Sbjct: 109 GEN---GLEFDTGIHYIGRMREGNIGRFILDQITEGQLDWAPMASPFD--------LMIL 157
Query: 119 DDQQNNSEISKFSKRD------ADTYPRYENELSKFCKIMDFLLDSPPPEALHG--DLSF 170
+ E +S R +P+ E + K+ +++ + L L
Sbjct: 158 EGPNGRKEFPMYSGRKEYIQGLKKKFPKEEAVIDKYMELVKVVARGVSHAVLLKFLPLPL 217
Query: 171 HDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD 230
LL + F C SL + +L + S L+A ++
Sbjct: 218 TQLLSKFGLLTRFSPFCRASTQSLAE----------------VLQQLGASRELQAVLSYI 261
Query: 231 AITGSMASIHAPGSGYVLL--HHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHI 288
T + H S + LL H++ G + GG ++ +AG +
Sbjct: 262 FPTYGVTPSHTAFSLHALLVDHYIQGAY--------YPRGGSSEIAFHTIPLIQRAGGAV 313
Query: 289 LVNTEVSQIMIGDSGEVDGVLLVDG---TRVHSSFVLSNATPYKTFMGLVPRDV--LPD 342
L V +++ +G GV + G ++ V+SNA + T+ L+P V LPD
Sbjct: 314 LTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAGMFNTYQHLLPETVRHLPD 372
>sp|P54980|CRTI_RHOS4 Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=crtI PE=3 SV=2
Length = 518
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 109/287 (37%), Gaps = 50/287 (17%)
Query: 279 KAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLV--- 335
K G +NTEV +I++ + G GV L G + + V+SNA T+M L+
Sbjct: 238 KVIEGQGGSFRMNTEVDEILV-EKGTATGVRLASGEVLRAGLVVSNADAGHTYMRLLRNH 296
Query: 336 PRDVLPDDFLRAIKYS----DYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHT---ATV 388
PR D +++ ++S ++ G K +VG HHT A
Sbjct: 297 PRRRWTDAHVKSRRWSMGLFVWYFGTK-------------GTKGMWPDVG-HHTIVNAPR 342
Query: 389 HIG-CESMEEIGSACQDAWNGLPSRRPVMEMTI--PSSLDKTISPPGK---HVVSLFTQY 442
+ G E + G +D M + I PS D T++P G + +S
Sbjct: 343 YKGLVEDIFLKGKLAKD-----------MSLYIHRPSITDPTVAPEGDDTFYALSPVPHL 391
Query: 443 TPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNI 502
+P D W+ E Y + ++++ PG + + TP + G
Sbjct: 392 KQAQPVD--WQ--AVAEPYRESVLEVLEQSMPGIGERIGPSLVFTPETFRDRYLSPWGAG 447
Query: 503 FHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGAPG 549
F + RP V L+L G+G+HPG GV G G
Sbjct: 448 FSIEPRILQSAWFRP----HNISEEVANLFLVGAGTHPGAGVPGVIG 490
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 23 ALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG--GAAVTEELIPGFKFSRCSYLQSLL 80
ALVIG G GL AA L G V V+++ V G G+++T+E G +F + ++
Sbjct: 13 ALVIGSGLGGLAAAMRLGAKGWRVTVIDKLDVPGGRGSSITQE---GHRFDLGPTIVTV- 68
Query: 81 RPSVIRELELKKHGLKL-----LKPIATSF-TPCLDGLYLLLGFDDQQNNSEISKFSKRD 134
P +R+L K G LKPI + DG + + + +E+++ S D
Sbjct: 69 -PQSLRDL-WKTCGRDFDADVELKPIDPFYEVRWPDGSHFTVRQSTEAMKAEVARLSPGD 126
Query: 135 ADTYPRYENELSK 147
Y ++ + K
Sbjct: 127 VAGYEKFLKDSEK 139
>sp|Q02861|CRTI_MYXXA All-trans-zeta-carotene desaturase OS=Myxococcus xanthus GN=carC
PE=1 SV=1
Length = 529
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 111/533 (20%), Positives = 198/533 (37%), Gaps = 68/533 (12%)
Query: 24 LVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPS 83
+V+G G GL AA LA G V V+E+ V GG L +++ + L P
Sbjct: 12 IVVGAGPGGLSAAINLAGQGFRVTVVEKDAVPGGRMKGLTLGASGEYAVDTGPSILQLPG 71
Query: 84 VIRELELK-----KHGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTY 138
V+ ++ + + +KLL + DG +L + +E++KF R A
Sbjct: 72 VLEQIFRRAARRLEDYVKLLPLDVNTRVHFWDGTHLDTTRHLDRMEAELAKFGPRQASAL 131
Query: 139 PRY-ENELSKF-CKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQ 196
++ E+ K+ F+ S + LR K W R +
Sbjct: 132 RQWMEDGREKYGIAYQKFICTSADNLGYYAPWRLAPTLRFKP-----WQTLYRQLDGFFH 186
Query: 197 KDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMGET 256
D V + L+ +K L L T + S L G
Sbjct: 187 DDRVTYA---LAYPSKYLG-------LHPTTCSSVF-----------SVIPFLELAFG-- 223
Query: 257 DGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRV 316
+W HVEGG +S + + A GA + T V ++ + D+G GV LV G +
Sbjct: 224 -----VW-HVEGGFRELSRGMMRCARDLGATFRMGTPVEKVRV-DAGRAVGVKLVGGEVL 276
Query: 317 HSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSS 376
+ V+ NA + R ++P + + +D + + + + ++ +
Sbjct: 277 DADAVVVNAD-----LAYAARSLIPAEAREGSRLTD--AALERAKYSCSTFMAYYGLDTV 329
Query: 377 QLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVV 436
++ PHH +++ + A +D L P + P D + +P G +
Sbjct: 330 YADL-PHH--LIYLSESARRTDRDALEDRHVDLED--PPFYVCNPGVTDPSGAPAGHSTL 384
Query: 437 SLFTQYTPY--KPSDGSWEDPTYRESYAQKCFSLIDEYA-PGFSSSVIGYDLLTPPDLER 493
+ TP +P D + RE + +++++ G + T
Sbjct: 385 YVLVP-TPNTGRPVDWVKTEQALRE----RIPAMLEKVGLKGVREHIREERYFTAETWRD 439
Query: 494 EFGLTGGNIFHGAMGLDSLFLMRP-VKGWSGYRTPVRGLYLCGSGSHPGGGVM 545
+F + G +F+ + L +RP VK + GLY G G+HPG G++
Sbjct: 440 DFNVFRGAVFNLSHTWLQLGPLRPKVKN-----RDIEGLYFVGGGTHPGSGLL 487
>sp|Q4L975|CRTN_STAHJ Dehydrosqualene desaturase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtN PE=3 SV=2
Length = 501
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 118/311 (37%), Gaps = 42/311 (13%)
Query: 265 HVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDS-GEVDGVLLVDGTRVHSSFVLS 323
+++GGM ++ + + G + +N +V +I+I DG+ + R + +
Sbjct: 216 YIKGGMYGLAQGLLQLGQDHGVKVELNADVQEIIIDPKFKRADGLRVNGDIRRFDKVLCT 275
Query: 324 NATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQF-HCCKSSQLEVGP 382
PY V ++++P HS + N + +K+ + C + + G
Sbjct: 276 ADFPY------VAQNLMP-----------VHSPLK--NYSPEKVDNMDYSCSAFLIYAGI 316
Query: 383 HHTATVHIGCESM---EEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLF 439
+ + ++ + D ++G P + + PS D+ ++P + + +
Sbjct: 317 NRQLRDKLHVHNVVFARDFRGNIDDIFSGKMPDDPSLYLYFPSVEDEALAPKDQTGMYVL 376
Query: 440 TQYTPYKPSDGSWEDPTYRESYAQKCFSLID--EYAPGFSSSVIGYDLLTPPDLEREFGL 497
K + W DP E ++ ++ E V+ + TP D E +
Sbjct: 377 MPVPELKTGEIDWNDPNMVEKAKDVIYNKLETIEALKDIRQDVVSETVFTPLDFESRYNA 436
Query: 498 TGGNIFHGAMGLDSLFLMRPVKGWSGYRTP-----VRGLYLCGSGSHPGGGV--MGAPGR 550
G+ F LM + + YR P + LY G+ +HPG GV + +
Sbjct: 437 KFGSAFG---------LMPTLTQSNYYRPPNVSRDYKDLYFAGASTHPGAGVPIVLTSAK 487
Query: 551 NAAHVVLQDFK 561
A +L+D +
Sbjct: 488 ITAEAMLEDIE 498
>sp|O66790|TRXB_AQUAE Thioredoxin reductase OS=Aquifex aeolicus (strain VF5) GN=trxB PE=3
SV=1
Length = 323
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 18/182 (9%)
Query: 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEEL--IPGFKFSRCSY 75
DK +D ++IG G G AA Y AR G VL R G VT+++ PG Y
Sbjct: 10 DKVYDVIIIGAGPAGTTAAIYTARAGWKTLVLYRAEADGALGVTQKIENYPGVPGPLSGY 69
Query: 76 LQSLLRPSVIRELELKKHGLKLL--KPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKR 133
LL+ ++RE + K G + + K IAT +Y + G + + ++ +
Sbjct: 70 --ELLK--IMRE-QAKSFGAEFVRGKVIATDLNSDPKKVYTIDGREFRGKTIIVASGAME 124
Query: 134 DADTYPRYENELSK---FCKIMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRH 190
A+ + E L + +C + D P A+ GD + ++++ F AR
Sbjct: 125 RANKFKGEEEFLGRGVSYCGVCDAAFFKDQPVAVIGDDDYA------IEEAEFIARFANK 178
Query: 191 VL 192
V
Sbjct: 179 VF 180
>sp|H8ZPX1|PNAO_PSESP Pseudooxynicotine oxidase OS=Pseudomonas sp. GN=pao PE=1 SV=1
Length = 497
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEEL 64
+DA+VIGGG G+ AA L+R GL VLE R +GG T +L
Sbjct: 60 YDAVVIGGGFAGVTAARELSRSGLKTLVLEGRSRLGGRTFTSKL 103
>sp|Q6LLT9|STHA_PHOPR Soluble pyridine nucleotide transhydrogenase OS=Photobacterium
profundum GN=sthA PE=3 SV=1
Length = 469
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 12 LTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFS 71
+T+ K +DA++IG G G AA L + GL+VAV+ER + +GG IP
Sbjct: 1 MTKNKKPTHFDAIIIGSGPGGEGAAMGLTKAGLNVAVIERENSVGGGCTHWGTIP----- 55
Query: 72 RCSYLQSLLRPSVIRELELKKHGL 95
LR +V R +E ++ L
Sbjct: 56 -----SKALRHAVSRIIEYNQNPL 74
>sp|A4WKY7|RUBPS_PYRAR Putative ribose 1,5-bisphosphate isomerase OS=Pyrobaculum
arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1498
PE=3 SV=2
Length = 261
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 19/92 (20%)
Query: 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLR 81
D ++G G +GL AA YLA G V V ERR F F +
Sbjct: 24 DVAIVGAGPSGLTAARYLAEKGFKVLVFERR---------------FSFGGGIGPGGNML 68
Query: 82 PSVIRELELKKHGLKLLKPIATSFTPCLDGLY 113
PS++ +++ L +L+ + P DGLY
Sbjct: 69 PSIV----VQEEALPILRDFKVRYQPAGDGLY 96
>sp|A8ZVP3|THI4_DESOH Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1
Length = 258
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 9/59 (15%)
Query: 8 NGVSLTRTLKDKKWDAL---------VIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57
N V+++R + D+ ++ L V+GGG +GL+AA LAR G VA+ ER+ IGG
Sbjct: 4 NEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGRKVALFERKLSIGG 62
>sp|A3MWF6|RUBPS_PYRCJ Putative ribose 1,5-bisphosphate isomerase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3
SV=1
Length = 261
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLR 81
D ++G G GL AA YLA G V V ERR F F +
Sbjct: 24 DVAIVGAGPAGLTAARYLAERGFKVLVFERR---------------FSFGGGIGPGGNMI 68
Query: 82 PSVIRELELKKHGLKLLKPIATSFTPCLDGLY 113
P ++ +++ L +LK F P DGLY
Sbjct: 69 PKIV----VQEEALPILKDFKVRFKPAGDGLY 96
>sp|P46882|AOFN_ASPNG Monoamine oxidase N OS=Aspergillus niger GN=maoN PE=1 SV=1
Length = 495
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 10 VSLTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFK 69
++ T KD WD +VIGGG+ GL A L G +LE R IGG + + I G+
Sbjct: 29 TNIEDTDKDGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYP 87
Query: 70 FSRCSYLQSLLRPSVIRELELKK 92
+ + V RE+ K
Sbjct: 88 YEMGGTWVHWHQSHVWREITRYK 110
>sp|P09624|DLDH_YEAST Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LPD1 PE=1
SV=1
Length = 499
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 RRSFSNGVSLTRTLK-DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61
+R+FS S RTL +K D ++IGGG G +AA A+ G + A +E+R +GG +
Sbjct: 11 KRAFS---STVRTLTINKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 67
Query: 62 EELIPGFKFSRCSYL 76
IP S+L
Sbjct: 68 VGCIPSKALLNNSHL 82
>sp|P17059|CRTD_RHOCB Methoxyneurosporene dehydrogenase OS=Rhodobacter capsulatus (strain
ATCC BAA-309 / NBRC 16581 / SB1003) GN=crtD PE=3 SV=2
Length = 494
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 464 KCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSG 523
+ F ++ FS L TP L R F + G I+ G+ RP+
Sbjct: 396 RTFPMLAAMGLTFSPDPETRALTTPALLSRRFPGSLGAIYGGSPEGTLATFRRPLA---- 451
Query: 524 YRTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQD 559
RT ++GLYL G G+HPG GV A G +AA +L D
Sbjct: 452 -RTGLKGLYLAGGGTHPGAGVPMALTSGTHAARALLAD 488
>sp|Q8ZZM5|RUBPS_PYRAE Putative ribose 1,5-bisphosphate isomerase OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=PAE0175 PE=3 SV=1
Length = 261
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
Query: 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLR 81
D ++G G GL AA YLA GL V V ERR F F +
Sbjct: 24 DVAIVGAGPAGLTAARYLAEKGLKVVVYERR---------------FSFGGGIGPGGNML 68
Query: 82 PSVIRELELKKHGLKLLKPIATSFTPCLDGLY 113
P ++ +++ + +L+ + P DGLY
Sbjct: 69 PKIV----VQEEAVPILRDFKVRYKPAEDGLY 96
>sp|Q02733|IRC15_YEAST Increased recombination centers protein 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC15 PE=1
SV=1
Length = 499
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLL 80
+D LVIG G G AA ++ GL A +++R +GGA + + +P SYL LL
Sbjct: 18 YDVLVIGCGPGGFTAAMQASQAGLLTACVDQRASLGGAYLVDGAVPSKTLLYESYLYRLL 77
Query: 81 RPSVIRE 87
+ + E
Sbjct: 78 QQQELIE 84
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT---------EELIPGFKFS 71
+DA+++G G G +AA LAR G V V+ER + G VT E +IPGF S
Sbjct: 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAES 65
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT---------EELIPGF 68
+DA+++G G G +AA LAR G V V+ER + G VT E +IPGF
Sbjct: 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGF 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,038,598
Number of Sequences: 539616
Number of extensions: 10294957
Number of successful extensions: 25256
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 24673
Number of HSP's gapped (non-prelim): 613
length of query: 565
length of database: 191,569,459
effective HSP length: 123
effective length of query: 442
effective length of database: 125,196,691
effective search space: 55336937422
effective search space used: 55336937422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)