Query 038727
Match_columns 565
No_of_seqs 239 out of 2610
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 03:45:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 1.1E-64 3.9E-69 534.7 28.9 483 21-562 2-493 (501)
2 3ka7_A Oxidoreductase; structu 100.0 2.3E-36 7.9E-41 311.7 36.3 398 21-557 1-424 (425)
3 3nrn_A Uncharacterized protein 100.0 9.3E-35 3.2E-39 299.0 31.5 389 21-556 1-403 (421)
4 1s3e_A Amine oxidase [flavin-c 100.0 2.3E-32 7.7E-37 288.8 32.6 436 19-562 3-456 (520)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 2.1E-32 7.1E-37 286.5 18.1 426 19-564 15-477 (478)
6 2yg5_A Putrescine oxidase; oxi 100.0 4.8E-31 1.6E-35 274.2 26.6 431 19-561 4-452 (453)
7 2vvm_A Monoamine oxidase N; FA 100.0 1.2E-30 4.3E-35 274.0 28.0 427 19-563 38-488 (495)
8 2bcg_G Secretory pathway GDP d 100.0 6.8E-30 2.3E-34 264.2 22.1 393 19-557 10-438 (453)
9 1sez_A Protoporphyrinogen oxid 100.0 1.7E-30 5.8E-35 273.7 13.2 433 19-563 12-496 (504)
10 3i6d_A Protoporphyrinogen oxid 100.0 1.4E-29 4.7E-34 264.6 18.4 428 19-560 4-468 (470)
11 3nks_A Protoporphyrinogen oxid 100.0 2.4E-29 8.3E-34 263.2 18.2 243 265-560 228-474 (477)
12 2jae_A L-amino acid oxidase; o 100.0 2.5E-29 8.5E-34 263.7 18.0 248 262-563 230-488 (489)
13 1b37_A Protein (polyamine oxid 100.0 3.1E-28 1.1E-32 253.9 18.6 246 266-563 201-461 (472)
14 4gde_A UDP-galactopyranose mut 100.0 5.5E-28 1.9E-32 255.3 18.0 287 17-367 7-308 (513)
15 3lov_A Protoporphyrinogen oxid 100.0 2.3E-27 8E-32 247.8 21.7 240 261-563 226-468 (475)
16 1d5t_A Guanine nucleotide diss 100.0 1E-27 3.5E-32 246.2 18.5 328 19-441 5-358 (433)
17 1rsg_A FMS1 protein; FAD bindi 99.9 2.8E-26 9.5E-31 241.7 24.0 279 18-367 6-304 (516)
18 2iid_A L-amino-acid oxidase; f 99.9 5.6E-26 1.9E-30 238.8 24.0 436 19-562 32-486 (498)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.9 4.1E-24 1.4E-28 220.4 28.3 406 21-559 2-425 (431)
20 2b9w_A Putative aminooxidase; 99.9 4.6E-23 1.6E-27 212.0 26.2 267 19-353 5-278 (424)
21 4dsg_A UDP-galactopyranose mut 99.9 2.4E-23 8.2E-28 216.5 22.1 423 18-557 7-452 (484)
22 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 2.8E-23 9.5E-28 207.2 19.3 231 265-560 106-342 (342)
23 4gut_A Lysine-specific histone 99.9 3.1E-22 1E-26 217.1 22.5 240 264-558 527-775 (776)
24 2z3y_A Lysine-specific histone 99.9 9.6E-22 3.3E-26 212.1 23.9 248 261-561 391-659 (662)
25 1vg0_A RAB proteins geranylger 99.9 5.3E-21 1.8E-25 200.1 27.8 192 205-440 312-507 (650)
26 2xag_A Lysine-specific histone 99.9 1.4E-21 4.8E-26 213.1 24.0 249 261-562 562-831 (852)
27 3p1w_A Rabgdi protein; GDI RAB 99.9 3.5E-22 1.2E-26 203.5 15.1 261 19-328 19-313 (475)
28 3ayj_A Pro-enzyme of L-phenyla 99.9 1E-20 3.5E-25 200.6 21.7 99 263-364 339-483 (721)
29 1yvv_A Amine oxidase, flavin-c 99.8 1.2E-18 4E-23 173.2 22.9 223 265-562 104-329 (336)
30 1v0j_A UDP-galactopyranose mut 99.8 1.1E-18 3.8E-23 177.0 11.3 95 19-120 6-106 (399)
31 1i8t_A UDP-galactopyranose mut 99.8 4E-18 1.4E-22 170.7 14.5 66 20-86 1-67 (367)
32 2bi7_A UDP-galactopyranose mut 99.8 2.8E-17 9.4E-22 165.6 19.1 67 20-86 3-71 (384)
33 2e1m_A L-glutamate oxidase; L- 99.6 1.7E-15 5.9E-20 150.1 15.1 74 19-92 43-129 (376)
34 3hdq_A UDP-galactopyranose mut 99.6 1.1E-15 3.7E-20 152.9 9.6 97 17-120 26-126 (397)
35 3oz2_A Digeranylgeranylglycero 99.5 7E-13 2.4E-17 134.5 15.9 64 272-336 103-169 (397)
36 3dje_A Fructosyl amine: oxygen 99.4 1.8E-12 6.1E-17 133.5 18.2 64 270-336 160-226 (438)
37 3dme_A Conserved exported prot 99.4 4E-12 1.4E-16 127.5 18.7 59 270-329 149-209 (369)
38 3nyc_A D-arginine dehydrogenas 99.4 2.5E-12 8.5E-17 129.8 14.4 57 270-329 153-209 (381)
39 1y56_B Sarcosine oxidase; dehy 99.3 3.1E-11 1E-15 121.8 19.3 58 270-329 148-205 (382)
40 3pvc_A TRNA 5-methylaminomethy 99.3 2.9E-11 1E-15 131.2 20.0 68 265-336 403-474 (689)
41 3ps9_A TRNA 5-methylaminomethy 99.3 3.7E-11 1.3E-15 130.3 20.0 62 271-336 417-478 (676)
42 2gag_B Heterotetrameric sarcos 99.3 2.7E-11 9.3E-16 123.2 17.7 57 271-329 174-230 (405)
43 3v76_A Flavoprotein; structura 99.3 6.1E-12 2.1E-16 127.5 11.9 62 265-329 126-187 (417)
44 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.5E-11 5.2E-16 126.5 14.1 60 269-329 132-191 (447)
45 4at0_A 3-ketosteroid-delta4-5a 99.3 3.6E-11 1.2E-15 125.8 16.7 61 268-329 199-264 (510)
46 3cgv_A Geranylgeranyl reductas 99.3 1.1E-11 3.7E-16 125.8 11.9 63 272-335 103-168 (397)
47 2uzz_A N-methyl-L-tryptophan o 99.3 3E-11 1E-15 121.4 14.7 61 271-336 149-209 (372)
48 1ryi_A Glycine oxidase; flavop 99.3 1.4E-11 4.9E-16 124.2 11.4 56 271-329 164-219 (382)
49 2gf3_A MSOX, monomeric sarcosi 99.3 6.1E-11 2.1E-15 119.9 15.3 56 271-329 150-205 (389)
50 3da1_A Glycerol-3-phosphate de 99.2 1.4E-11 4.6E-16 130.2 10.4 59 270-329 169-232 (561)
51 1qo8_A Flavocytochrome C3 fuma 99.2 1.3E-10 4.3E-15 123.3 15.9 60 270-329 249-312 (566)
52 1y0p_A Fumarate reductase flav 99.2 3.2E-10 1.1E-14 120.4 18.7 59 271-329 255-317 (571)
53 1pj5_A N,N-dimethylglycine oxi 99.2 2.8E-10 9.5E-15 126.3 18.8 58 270-329 150-207 (830)
54 2oln_A NIKD protein; flavoprot 99.2 2.9E-10 1E-14 115.2 16.6 56 271-329 153-208 (397)
55 3nlc_A Uncharacterized protein 99.2 1.6E-10 5.4E-15 120.4 13.0 58 271-329 220-277 (549)
56 3kkj_A Amine oxidase, flavin-c 99.2 2E-11 7E-16 117.6 5.5 55 20-75 2-56 (336)
57 3rp8_A Flavoprotein monooxygen 99.1 1.2E-10 4.2E-15 118.4 11.4 60 272-335 128-187 (407)
58 3i3l_A Alkylhalidase CMLS; fla 99.1 2.6E-10 8.9E-15 120.6 14.1 64 271-335 128-194 (591)
59 2x3n_A Probable FAD-dependent 99.1 8.9E-11 3E-15 119.1 10.1 65 272-337 108-174 (399)
60 2vou_A 2,6-dihydroxypyridine h 99.1 5.3E-10 1.8E-14 113.2 15.4 60 273-336 101-160 (397)
61 2rgh_A Alpha-glycerophosphate 99.1 2.5E-10 8.6E-15 120.7 13.3 58 271-329 188-250 (571)
62 3ihg_A RDME; flavoenzyme, anth 99.1 5.4E-10 1.8E-14 117.8 15.3 63 272-336 121-190 (535)
63 3axb_A Putative oxidoreductase 99.1 3.3E-10 1.1E-14 116.8 13.0 58 270-329 180-254 (448)
64 3nix_A Flavoprotein/dehydrogen 99.1 4.2E-10 1.4E-14 115.0 13.5 65 272-337 107-174 (421)
65 2gqf_A Hypothetical protein HI 99.1 6.1E-10 2.1E-14 112.4 14.4 58 269-329 107-168 (401)
66 3alj_A 2-methyl-3-hydroxypyrid 99.1 6.3E-10 2.1E-14 112.0 14.3 60 272-336 108-167 (379)
67 3atr_A Conserved archaeal prot 99.1 1.8E-10 6.1E-15 118.9 9.9 64 272-336 101-169 (453)
68 3o0h_A Glutathione reductase; 99.1 1.5E-10 5.3E-15 120.3 9.4 58 270-329 231-288 (484)
69 3lxd_A FAD-dependent pyridine 99.1 2.4E-10 8.2E-15 116.5 10.2 60 269-329 192-251 (415)
70 3e1t_A Halogenase; flavoprotei 99.1 5.5E-10 1.9E-14 117.0 12.8 63 272-335 112-178 (512)
71 3gwf_A Cyclohexanone monooxyge 99.1 5.2E-10 1.8E-14 117.3 12.4 45 17-61 5-50 (540)
72 1d4d_A Flavocytochrome C fumar 99.1 3.6E-09 1.2E-13 112.0 17.9 60 270-329 254-317 (572)
73 4dna_A Probable glutathione re 99.0 5.4E-10 1.8E-14 115.5 10.9 59 269-329 209-268 (463)
74 2qa1_A PGAE, polyketide oxygen 99.0 3.2E-09 1.1E-13 110.5 16.4 64 272-337 107-173 (500)
75 3uox_A Otemo; baeyer-villiger 99.0 9.5E-10 3.2E-14 115.4 12.3 43 18-60 7-49 (545)
76 2qa2_A CABE, polyketide oxygen 99.0 2.9E-09 9.9E-14 110.8 15.7 64 272-337 108-174 (499)
77 3fmw_A Oxygenase; mithramycin, 99.0 1.1E-09 3.7E-14 115.7 12.5 64 272-337 149-215 (570)
78 2wdq_A Succinate dehydrogenase 99.0 3.5E-09 1.2E-13 112.2 16.4 59 270-329 142-206 (588)
79 4ap3_A Steroid monooxygenase; 99.0 1.3E-09 4.5E-14 114.4 12.9 44 18-61 19-62 (549)
80 3fg2_P Putative rubredoxin red 99.0 6.8E-10 2.3E-14 112.7 10.1 60 269-329 182-241 (404)
81 1rp0_A ARA6, thiazole biosynth 99.0 1.8E-09 6.3E-14 103.7 12.6 41 19-59 38-79 (284)
82 1k0i_A P-hydroxybenzoate hydro 99.0 1.2E-09 4.1E-14 110.5 11.4 64 272-336 104-170 (394)
83 1w4x_A Phenylacetone monooxyge 99.0 1.7E-09 5.7E-14 114.0 12.6 42 19-60 15-56 (542)
84 1chu_A Protein (L-aspartate ox 99.0 2.1E-09 7.2E-14 112.8 13.3 57 272-329 139-208 (540)
85 2gmh_A Electron transfer flavo 99.0 4.7E-09 1.6E-13 111.3 16.0 61 271-331 144-219 (584)
86 2bs2_A Quinol-fumarate reducta 99.0 7E-09 2.4E-13 110.8 17.1 58 271-329 158-220 (660)
87 3urh_A Dihydrolipoyl dehydroge 99.0 2.1E-09 7.2E-14 112.0 11.9 59 269-329 237-300 (491)
88 2cul_A Glucose-inhibited divis 98.9 7.1E-09 2.4E-13 96.4 13.2 56 272-329 69-125 (232)
89 2xdo_A TETX2 protein; tetracyc 98.9 2.5E-09 8.4E-14 108.4 10.5 60 272-335 129-188 (398)
90 3itj_A Thioredoxin reductase 1 98.9 3.7E-10 1.3E-14 111.7 3.9 43 19-61 21-67 (338)
91 2h88_A Succinate dehydrogenase 98.9 1.1E-08 3.9E-13 108.4 15.4 58 271-329 155-217 (621)
92 2qcu_A Aerobic glycerol-3-phos 98.9 1E-08 3.6E-13 106.9 14.3 58 270-329 148-210 (501)
93 3c4n_A Uncharacterized protein 98.9 2.6E-09 8.8E-14 108.4 9.4 56 271-329 172-236 (405)
94 3jsk_A Cypbp37 protein; octame 98.9 6.2E-09 2.1E-13 101.0 11.5 41 19-59 78-120 (344)
95 1mo9_A ORF3; nucleotide bindin 98.9 9.8E-10 3.3E-14 115.3 6.2 60 270-329 254-316 (523)
96 2zbw_A Thioredoxin reductase; 98.9 5.3E-09 1.8E-13 103.2 11.0 41 19-59 4-44 (335)
97 4a9w_A Monooxygenase; baeyer-v 98.9 9.6E-09 3.3E-13 102.2 13.0 56 272-329 77-132 (357)
98 1jnr_A Adenylylsulfate reducta 98.9 4.3E-08 1.5E-12 105.0 18.2 57 272-329 152-218 (643)
99 2yqu_A 2-oxoglutarate dehydrog 98.9 1.1E-09 3.7E-14 113.0 5.2 59 269-329 206-264 (455)
100 3f8d_A Thioredoxin reductase ( 98.9 8.7E-09 3E-13 101.0 11.2 51 275-328 74-124 (323)
101 1kf6_A Fumarate reductase flav 98.9 5.1E-08 1.7E-12 103.5 17.6 59 271-330 134-198 (602)
102 3c96_A Flavin-containing monoo 98.8 1E-08 3.5E-13 104.3 11.3 62 272-336 108-176 (410)
103 3ab1_A Ferredoxin--NADP reduct 98.8 1.5E-08 5E-13 101.2 12.1 41 19-59 13-53 (360)
104 2gjc_A Thiazole biosynthetic e 98.8 3E-08 1E-12 95.6 13.4 41 19-59 64-106 (326)
105 1xdi_A RV3303C-LPDA; reductase 98.8 1.9E-09 6.4E-14 112.6 5.2 57 271-329 223-279 (499)
106 3iwa_A FAD-dependent pyridine 98.8 2.9E-09 9.8E-14 110.4 6.5 60 268-329 199-258 (472)
107 3lad_A Dihydrolipoamide dehydr 98.8 1.2E-09 3.9E-14 113.6 3.5 58 270-329 220-280 (476)
108 2zxi_A TRNA uridine 5-carboxym 98.8 2.3E-08 8E-13 104.5 12.9 56 272-329 124-180 (637)
109 2e4g_A Tryptophan halogenase; 98.8 9.1E-08 3.1E-12 100.9 17.4 58 272-330 195-253 (550)
110 3lzw_A Ferredoxin--NADP reduct 98.8 9.3E-09 3.2E-13 101.2 9.1 41 19-59 6-46 (332)
111 1fec_A Trypanothione reductase 98.8 2.4E-08 8.2E-13 103.8 12.5 58 271-329 231-288 (490)
112 2aqj_A Tryptophan halogenase, 98.8 7.9E-08 2.7E-12 101.2 16.4 59 271-330 165-223 (538)
113 1ges_A Glutathione reductase; 98.8 7.3E-09 2.5E-13 106.5 8.2 58 271-329 208-265 (450)
114 2bry_A NEDD9 interacting prote 98.8 3E-08 1E-12 103.1 12.3 59 272-330 167-231 (497)
115 2r0c_A REBC; flavin adenine di 98.8 4.1E-08 1.4E-12 103.5 13.4 60 272-336 139-203 (549)
116 2e5v_A L-aspartate oxidase; ar 98.8 3.2E-07 1.1E-11 94.7 19.1 58 271-330 119-177 (472)
117 4hb9_A Similarities with proba 98.7 7.3E-08 2.5E-12 97.8 14.0 51 285-336 123-173 (412)
118 2r9z_A Glutathione amide reduc 98.7 1.7E-08 6E-13 104.1 9.3 57 271-329 207-264 (463)
119 1trb_A Thioredoxin reductase; 98.7 1.2E-08 4E-13 100.0 7.5 58 271-329 184-247 (320)
120 3k30_A Histamine dehydrogenase 98.7 3.8E-09 1.3E-13 114.5 4.4 45 18-62 389-433 (690)
121 2dkh_A 3-hydroxybenzoate hydro 98.7 4.6E-08 1.6E-12 104.9 12.7 65 272-337 142-219 (639)
122 1q1r_A Putidaredoxin reductase 98.7 6.7E-08 2.3E-12 98.7 13.0 59 270-329 190-250 (431)
123 3oc4_A Oxidoreductase, pyridin 98.7 2.2E-08 7.5E-13 103.1 9.4 57 270-329 188-244 (452)
124 2wpf_A Trypanothione reductase 98.7 7.6E-09 2.6E-13 107.6 5.9 58 271-329 235-292 (495)
125 3ces_A MNMG, tRNA uridine 5-ca 98.7 5E-08 1.7E-12 102.4 11.8 56 272-329 125-181 (651)
126 2ywl_A Thioredoxin reductase r 98.7 1.3E-07 4.4E-12 84.0 13.0 53 273-329 58-110 (180)
127 1zmd_A Dihydrolipoyl dehydroge 98.7 2E-09 6.8E-14 111.7 1.3 59 270-329 219-282 (474)
128 1onf_A GR, grase, glutathione 98.7 1.1E-07 3.8E-12 99.0 14.4 59 270-329 216-275 (500)
129 3gyx_A Adenylylsulfate reducta 98.7 1.4E-07 4.8E-12 100.7 14.8 57 272-329 167-233 (662)
130 3cp8_A TRNA uridine 5-carboxym 98.7 4.8E-08 1.6E-12 102.5 10.7 56 272-329 118-174 (641)
131 4b1b_A TRXR, thioredoxin reduc 98.7 3.2E-09 1.1E-13 110.8 1.7 63 266-330 258-320 (542)
132 2pyx_A Tryptophan halogenase; 98.7 3E-07 1E-11 96.5 16.5 58 272-330 176-234 (526)
133 2weu_A Tryptophan 5-halogenase 98.7 2.3E-07 7.8E-12 97.1 15.1 59 271-330 173-231 (511)
134 3d1c_A Flavin-containing putat 98.7 1.7E-07 5.9E-12 93.6 13.5 55 272-329 89-143 (369)
135 3ics_A Coenzyme A-disulfide re 98.7 2.9E-08 9.8E-13 105.9 7.7 55 270-328 227-281 (588)
136 4gcm_A TRXR, thioredoxin reduc 98.6 1.6E-08 5.4E-13 98.7 5.1 43 18-61 4-46 (312)
137 3ef6_A Toluene 1,2-dioxygenase 98.6 9.6E-09 3.3E-13 104.3 3.6 57 271-329 185-241 (410)
138 1y56_A Hypothetical protein PH 98.6 1.7E-08 5.9E-13 104.9 5.1 49 279-329 265-313 (493)
139 2v3a_A Rubredoxin reductase; a 98.6 7.8E-08 2.7E-12 96.7 9.4 58 270-329 186-243 (384)
140 2q0l_A TRXR, thioredoxin reduc 98.6 2.8E-07 9.7E-12 89.7 13.1 38 21-59 2-40 (311)
141 3fbs_A Oxidoreductase; structu 98.6 2.4E-07 8.1E-12 89.5 11.9 34 20-53 2-35 (297)
142 3fpz_A Thiazole biosynthetic e 98.6 2E-08 6.8E-13 98.7 4.0 42 19-60 64-107 (326)
143 2cdu_A NADPH oxidase; flavoenz 98.6 1.7E-08 5.8E-13 104.0 3.1 60 269-330 189-248 (452)
144 3h8l_A NADH oxidase; membrane 98.6 1.8E-07 6.2E-12 94.9 10.5 52 271-328 218-269 (409)
145 1fl2_A Alkyl hydroperoxide red 98.5 3.4E-07 1.2E-11 89.0 11.2 52 278-329 63-115 (310)
146 3ntd_A FAD-dependent pyridine 98.5 5E-08 1.7E-12 103.5 5.6 58 270-329 191-267 (565)
147 2gqw_A Ferredoxin reductase; f 98.5 1.4E-07 4.9E-12 95.5 8.6 53 271-329 187-239 (408)
148 2bc0_A NADH oxidase; flavoprot 98.5 1E-07 3.6E-12 99.0 7.4 57 270-329 235-291 (490)
149 3h28_A Sulfide-quinone reducta 98.5 8.3E-08 2.8E-12 98.1 6.5 38 21-58 3-42 (430)
150 1kdg_A CDH, cellobiose dehydro 98.5 7.7E-07 2.6E-11 93.8 13.9 73 274-348 198-280 (546)
151 4fk1_A Putative thioredoxin re 98.5 4.5E-08 1.5E-12 95.1 4.0 40 18-58 4-43 (304)
152 1hyu_A AHPF, alkyl hydroperoxi 98.5 6.4E-07 2.2E-11 93.7 12.8 54 276-329 272-326 (521)
153 3t37_A Probable dehydrogenase; 98.5 2.3E-07 7.9E-12 97.5 9.0 50 284-335 224-276 (526)
154 3qvp_A Glucose oxidase; oxidor 98.5 5.6E-07 1.9E-11 94.5 11.7 53 281-335 237-298 (583)
155 1n4w_A CHOD, cholesterol oxida 98.5 3.6E-07 1.2E-11 95.2 9.7 61 270-330 220-289 (504)
156 4a5l_A Thioredoxin reductase; 98.5 8.8E-08 3E-12 93.4 4.6 35 20-54 4-38 (314)
157 4eqs_A Coenzyme A disulfide re 98.5 5.4E-08 1.9E-12 99.5 3.1 54 270-329 187-240 (437)
158 4g6h_A Rotenone-insensitive NA 98.4 8.8E-07 3E-11 91.9 11.7 56 270-327 271-330 (502)
159 3cty_A Thioredoxin reductase; 98.4 1.3E-07 4.5E-12 92.4 4.2 42 17-59 13-54 (319)
160 1c0p_A D-amino acid oxidase; a 98.4 2.1E-07 7.1E-12 92.8 5.7 39 19-57 5-43 (363)
161 2q7v_A Thioredoxin reductase; 98.3 2.4E-07 8.1E-12 90.9 4.0 40 19-59 7-46 (325)
162 2a87_A TRXR, TR, thioredoxin r 98.3 3.5E-07 1.2E-11 90.0 4.2 46 13-59 7-52 (335)
163 3hyw_A Sulfide-quinone reducta 98.3 1.9E-06 6.5E-11 87.8 9.7 56 269-328 198-255 (430)
164 1vdc_A NTR, NADPH dependent th 98.3 2.7E-07 9.2E-12 90.8 3.2 34 18-51 6-39 (333)
165 3l8k_A Dihydrolipoyl dehydroge 98.3 2.6E-07 9E-12 95.3 3.0 42 20-61 4-45 (466)
166 3ic9_A Dihydrolipoamide dehydr 98.3 3E-07 1E-11 95.6 2.9 57 270-329 214-274 (492)
167 3qfa_A Thioredoxin reductase 1 98.2 6.3E-07 2.1E-11 93.7 5.3 43 19-61 31-81 (519)
168 4b63_A L-ornithine N5 monooxyg 98.2 1.9E-06 6.6E-11 89.5 8.4 45 15-59 34-78 (501)
169 3ihm_A Styrene monooxygenase A 98.2 5.2E-07 1.8E-11 92.1 3.9 42 12-53 14-55 (430)
170 2vdc_G Glutamate synthase [NAD 98.2 1E-06 3.6E-11 90.1 6.1 42 19-60 121-162 (456)
171 2qae_A Lipoamide, dihydrolipoy 98.2 5.4E-07 1.8E-11 93.1 3.9 57 271-329 215-276 (468)
172 3r9u_A Thioredoxin reductase; 98.2 5.6E-07 1.9E-11 87.6 3.8 42 19-61 3-45 (315)
173 2gv8_A Monooxygenase; FMO, FAD 98.2 7.9E-07 2.7E-11 91.3 5.1 42 19-60 5-48 (447)
174 3dk9_A Grase, GR, glutathione 98.2 4.8E-07 1.6E-11 93.8 3.4 59 270-329 227-293 (478)
175 1dxl_A Dihydrolipoamide dehydr 98.2 9.6E-07 3.3E-11 91.3 5.1 58 270-329 217-279 (470)
176 3g3e_A D-amino-acid oxidase; F 98.2 6.1E-07 2.1E-11 88.9 2.7 50 271-336 142-191 (351)
177 3dgz_A Thioredoxin reductase 2 98.2 1E-06 3.5E-11 91.5 4.5 59 270-329 224-287 (488)
178 2hqm_A GR, grase, glutathione 98.1 7.6E-07 2.6E-11 92.2 3.3 59 271-329 226-285 (479)
179 1ojt_A Surface protein; redox- 98.1 7.5E-07 2.6E-11 92.3 2.9 58 270-329 225-286 (482)
180 3dgh_A TRXR-1, thioredoxin red 98.1 1.4E-06 5E-11 90.2 4.7 59 270-329 226-289 (483)
181 2eq6_A Pyruvate dehydrogenase 98.1 9.4E-07 3.2E-11 91.1 3.2 58 270-329 209-271 (464)
182 1zk7_A HGII, reductase, mercur 98.1 1.3E-06 4.5E-11 90.2 4.2 57 270-329 215-271 (467)
183 1v59_A Dihydrolipoamide dehydr 98.1 1.1E-06 3.8E-11 91.1 3.2 59 270-329 223-287 (478)
184 2xve_A Flavin-containing monoo 98.1 2.1E-06 7.2E-11 88.4 4.8 41 21-61 3-49 (464)
185 3pl8_A Pyranose 2-oxidase; sub 98.1 2.3E-06 7.9E-11 91.1 5.0 41 19-59 45-85 (623)
186 1lvl_A Dihydrolipoamide dehydr 98.0 1.6E-06 5.4E-11 89.3 3.3 56 270-329 211-268 (458)
187 3c4a_A Probable tryptophan hyd 98.0 3E-06 1E-10 85.0 5.1 35 21-55 1-37 (381)
188 1o94_A Tmadh, trimethylamine d 98.0 2.9E-06 1E-10 92.3 5.0 49 19-67 388-436 (729)
189 1ebd_A E3BD, dihydrolipoamide 98.0 2.4E-06 8.3E-11 87.8 3.9 58 270-329 210-270 (455)
190 2a8x_A Dihydrolipoyl dehydroge 98.0 2.3E-06 7.8E-11 88.3 3.3 58 270-329 211-271 (464)
191 1pn0_A Phenol 2-monooxygenase; 98.0 2.6E-06 9E-11 91.5 3.8 41 15-55 3-48 (665)
192 3g5s_A Methylenetetrahydrofola 97.9 7.8E-06 2.7E-10 79.7 5.8 39 21-59 2-40 (443)
193 3s5w_A L-ornithine 5-monooxyge 97.9 4E-06 1.4E-10 86.5 3.4 38 19-56 29-71 (463)
194 1ps9_A 2,4-dienoyl-COA reducta 97.9 9.3E-06 3.2E-10 87.7 5.2 42 19-60 372-413 (671)
195 2gag_A Heterotetrameric sarcos 97.8 7.6E-06 2.6E-10 91.7 4.0 41 20-60 128-168 (965)
196 1lqt_A FPRA; NADP+ derivative, 97.8 7.1E-06 2.4E-10 84.0 3.4 41 20-60 3-50 (456)
197 1cjc_A Protein (adrenodoxin re 97.8 9.2E-06 3.2E-10 83.3 4.2 42 19-60 5-48 (460)
198 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.6E-10 90.4 5.5 40 20-59 187-227 (1025)
199 2x8g_A Thioredoxin glutathione 97.8 1.1E-05 3.8E-10 86.0 4.2 35 18-52 105-139 (598)
200 3kd9_A Coenzyme A disulfide re 97.8 1.4E-05 4.8E-10 82.0 4.8 55 270-328 189-243 (449)
201 2eq6_A Pyruvate dehydrogenase 97.7 0.00022 7.6E-09 73.3 11.9 34 21-54 170-203 (464)
202 1ju2_A HydroxynitrIle lyase; f 97.6 1.4E-05 4.8E-10 83.6 2.3 37 19-56 25-61 (536)
203 3q9t_A Choline dehydrogenase a 97.6 2.6E-05 8.8E-10 81.9 3.8 51 283-335 218-275 (577)
204 2hqm_A GR, grase, glutathione 97.6 0.0004 1.4E-08 71.7 12.4 35 20-54 185-219 (479)
205 1nhp_A NADH peroxidase; oxidor 97.6 3.4E-05 1.2E-09 79.0 4.3 56 271-329 191-246 (447)
206 3cgb_A Pyridine nucleotide-dis 97.6 4.1E-05 1.4E-09 79.1 4.4 56 271-329 227-282 (480)
207 3klj_A NAD(FAD)-dependent dehy 97.5 5.4E-05 1.9E-09 75.7 4.7 38 19-56 8-45 (385)
208 1ebd_A E3BD, dihydrolipoamide 97.5 0.00038 1.3E-08 71.3 10.9 36 20-55 170-205 (455)
209 3sx6_A Sulfide-quinone reducta 97.5 5.8E-05 2E-09 77.0 4.4 34 21-54 5-41 (437)
210 1xhc_A NADH oxidase /nitrite r 97.5 5.4E-05 1.9E-09 75.2 3.9 52 271-329 183-234 (367)
211 1gpe_A Protein (glucose oxidas 97.5 7.7E-05 2.6E-09 78.8 5.2 38 18-55 22-60 (587)
212 1m6i_A Programmed cell death p 97.5 5.4E-05 1.8E-09 78.4 4.0 57 271-329 226-282 (493)
213 1v59_A Dihydrolipoamide dehydr 97.5 0.00051 1.7E-08 70.9 11.1 36 20-55 183-218 (478)
214 3fim_B ARYL-alcohol oxidase; A 97.4 5.2E-05 1.8E-09 79.5 3.2 36 20-55 2-38 (566)
215 2jbv_A Choline oxidase; alcoho 97.4 8.2E-05 2.8E-09 78.0 4.6 62 273-335 210-278 (546)
216 2a8x_A Dihydrolipoyl dehydroge 97.4 0.001 3.5E-08 68.3 12.1 35 20-54 171-205 (464)
217 3gwf_A Cyclohexanone monooxyge 97.4 0.0015 5.2E-08 68.2 13.2 35 20-54 178-212 (540)
218 1coy_A Cholesterol oxidase; ox 97.4 0.00012 4E-09 76.2 4.7 61 270-330 225-294 (507)
219 1ojt_A Surface protein; redox- 97.3 0.0005 1.7E-08 71.0 9.3 35 20-54 185-219 (482)
220 2qae_A Lipoamide, dihydrolipoy 97.3 0.0013 4.4E-08 67.6 12.2 35 20-54 174-208 (468)
221 3vrd_B FCCB subunit, flavocyto 97.3 0.00013 4.3E-09 73.6 3.6 51 275-327 206-256 (401)
222 3cgb_A Pyridine nucleotide-dis 97.2 0.0016 5.4E-08 67.2 11.4 36 19-54 185-220 (480)
223 1dxl_A Dihydrolipoamide dehydr 97.2 0.00098 3.4E-08 68.6 9.7 35 20-54 177-211 (470)
224 3ic9_A Dihydrolipoamide dehydr 97.2 0.0025 8.4E-08 65.9 12.3 36 20-55 174-209 (492)
225 1zk7_A HGII, reductase, mercur 97.2 0.0028 9.6E-08 65.1 12.5 35 20-54 176-210 (467)
226 3uox_A Otemo; baeyer-villiger 97.1 0.0034 1.2E-07 65.6 13.1 34 21-54 186-219 (545)
227 3dk9_A Grase, GR, glutathione 96.9 0.0065 2.2E-07 62.5 12.7 34 21-54 188-221 (478)
228 3s5w_A L-ornithine 5-monooxyge 96.8 0.016 5.6E-07 59.2 14.2 35 20-54 227-263 (463)
229 3dgz_A Thioredoxin reductase 2 96.7 0.014 4.8E-07 60.1 12.8 33 20-52 185-217 (488)
230 2e1m_C L-glutamate oxidase; L- 96.1 0.00031 1.1E-08 61.7 -3.2 93 459-562 57-154 (181)
231 3fwz_A Inner membrane protein 95.8 0.013 4.4E-07 48.9 5.7 35 19-53 6-40 (140)
232 1nhp_A NADH peroxidase; oxidor 95.8 0.0082 2.8E-07 61.1 5.3 39 19-57 148-186 (447)
233 3klj_A NAD(FAD)-dependent dehy 95.8 0.0074 2.5E-07 60.1 4.8 37 21-57 147-183 (385)
234 2e1m_B L-glutamate oxidase; L- 95.7 0.013 4.3E-07 47.8 5.1 52 314-367 4-55 (130)
235 2g1u_A Hypothetical protein TM 95.7 0.0097 3.3E-07 50.6 4.7 35 19-53 18-52 (155)
236 1lss_A TRK system potassium up 95.5 0.012 4.1E-07 48.8 4.5 33 21-53 5-37 (140)
237 3llv_A Exopolyphosphatase-rela 95.4 0.017 5.8E-07 48.1 5.1 33 21-53 7-39 (141)
238 4gcm_A TRXR, thioredoxin reduc 95.4 0.0098 3.3E-07 57.2 3.9 34 21-54 146-179 (312)
239 1lvl_A Dihydrolipoamide dehydr 95.3 0.011 3.8E-07 60.3 4.4 37 20-56 171-207 (458)
240 3ado_A Lambda-crystallin; L-gu 95.3 0.014 4.7E-07 55.9 4.6 33 21-53 7-39 (319)
241 1xhc_A NADH oxidase /nitrite r 95.3 0.015 5E-07 57.5 4.9 37 21-57 144-180 (367)
242 1f0y_A HCDH, L-3-hydroxyacyl-C 95.2 0.017 5.9E-07 55.3 5.1 33 21-53 16-48 (302)
243 2yqu_A 2-oxoglutarate dehydrog 95.2 0.014 4.9E-07 59.5 4.7 35 21-55 168-202 (455)
244 1id1_A Putative potassium chan 95.2 0.026 8.7E-07 47.8 5.5 34 20-53 3-36 (153)
245 3lk7_A UDP-N-acetylmuramoylala 95.2 0.017 5.7E-07 58.8 5.0 34 20-53 9-42 (451)
246 3ic5_A Putative saccharopine d 95.1 0.017 5.7E-07 46.3 4.0 33 21-53 6-39 (118)
247 2v3a_A Rubredoxin reductase; a 95.1 0.017 5.7E-07 57.5 4.9 38 20-57 145-182 (384)
248 3k96_A Glycerol-3-phosphate de 95.1 0.019 6.7E-07 56.1 5.2 38 16-53 25-62 (356)
249 2dpo_A L-gulonate 3-dehydrogen 95.1 0.017 5.7E-07 55.6 4.6 33 21-53 7-39 (319)
250 1m6i_A Programmed cell death p 94.9 0.047 1.6E-06 56.2 7.8 38 19-56 10-49 (493)
251 1ges_A Glutathione reductase; 94.8 0.021 7.2E-07 58.1 4.7 37 20-56 167-203 (450)
252 4a5l_A Thioredoxin reductase; 94.7 0.022 7.6E-07 54.6 4.3 34 20-53 152-185 (314)
253 2gqw_A Ferredoxin reductase; f 94.6 0.027 9.4E-07 56.4 4.9 38 20-57 145-182 (408)
254 2r9z_A Glutathione amide reduc 94.5 0.028 9.6E-07 57.4 4.7 36 21-56 167-202 (463)
255 2hmt_A YUAA protein; RCK, KTN, 94.4 0.038 1.3E-06 45.9 4.7 33 21-53 7-39 (144)
256 3c85_A Putative glutathione-re 94.3 0.037 1.3E-06 48.4 4.6 34 20-53 39-73 (183)
257 3k6j_A Protein F01G10.3, confi 94.3 0.056 1.9E-06 54.4 6.3 34 21-54 55-88 (460)
258 2x5o_A UDP-N-acetylmuramoylala 94.2 0.031 1.1E-06 56.6 4.4 38 21-58 6-43 (439)
259 3i83_A 2-dehydropantoate 2-red 94.2 0.037 1.3E-06 53.4 4.7 33 21-53 3-35 (320)
260 3hn2_A 2-dehydropantoate 2-red 94.2 0.039 1.3E-06 53.0 4.8 33 21-53 3-35 (312)
261 1zmd_A Dihydrolipoyl dehydroge 94.2 0.038 1.3E-06 56.6 5.0 37 21-57 179-215 (474)
262 2bc0_A NADH oxidase; flavoprot 94.2 0.035 1.2E-06 57.2 4.7 37 20-56 194-230 (490)
263 3l4b_C TRKA K+ channel protien 94.1 0.039 1.3E-06 49.9 4.3 32 22-53 2-33 (218)
264 4e12_A Diketoreductase; oxidor 94.1 0.047 1.6E-06 51.6 5.0 33 21-53 5-37 (283)
265 1q1r_A Putidaredoxin reductase 94.1 0.04 1.4E-06 55.7 4.8 37 20-56 149-185 (431)
266 1zej_A HBD-9, 3-hydroxyacyl-CO 93.9 0.045 1.6E-06 51.7 4.5 34 19-53 11-44 (293)
267 3ef6_A Toluene 1,2-dioxygenase 93.9 0.044 1.5E-06 54.9 4.7 37 20-56 143-179 (410)
268 3g0o_A 3-hydroxyisobutyrate de 93.9 0.048 1.6E-06 52.1 4.7 35 19-53 6-40 (303)
269 1pzg_A LDH, lactate dehydrogen 93.8 0.05 1.7E-06 52.6 4.7 35 19-53 8-43 (331)
270 3d1c_A Flavin-containing putat 93.7 0.046 1.6E-06 53.7 4.3 33 21-53 167-199 (369)
271 3doj_A AT3G25530, dehydrogenas 93.7 0.057 2E-06 51.8 4.8 34 20-53 21-54 (310)
272 1coy_A Cholesterol oxidase; ox 93.7 0.037 1.3E-06 57.2 3.7 37 18-54 9-45 (507)
273 2raf_A Putative dinucleotide-b 93.6 0.067 2.3E-06 48.0 4.8 35 20-54 19-53 (209)
274 3g79_A NDP-N-acetyl-D-galactos 93.6 0.038 1.3E-06 56.1 3.5 36 19-54 17-54 (478)
275 3kd9_A Coenzyme A disulfide re 93.6 0.058 2E-06 54.8 4.9 37 21-57 149-185 (449)
276 2q0l_A TRXR, thioredoxin reduc 93.6 0.053 1.8E-06 51.9 4.4 34 20-53 143-176 (311)
277 2y0c_A BCEC, UDP-glucose dehyd 93.6 0.056 1.9E-06 55.2 4.7 34 20-53 8-41 (478)
278 4eqs_A Coenzyme A disulfide re 93.5 0.048 1.6E-06 55.2 4.2 36 21-56 148-183 (437)
279 1onf_A GR, grase, glutathione 93.5 0.05 1.7E-06 56.1 4.4 37 20-56 176-212 (500)
280 3g17_A Similar to 2-dehydropan 93.5 0.05 1.7E-06 51.7 4.1 33 21-53 3-35 (294)
281 1ks9_A KPA reductase;, 2-dehyd 93.5 0.062 2.1E-06 50.9 4.7 32 22-53 2-33 (291)
282 3qha_A Putative oxidoreductase 93.4 0.057 2E-06 51.4 4.3 35 20-54 15-49 (296)
283 3gg2_A Sugar dehydrogenase, UD 93.4 0.063 2.1E-06 54.3 4.7 33 21-53 3-35 (450)
284 3eag_A UDP-N-acetylmuramate:L- 93.4 0.077 2.6E-06 51.3 5.2 34 20-53 4-38 (326)
285 1fl2_A Alkyl hydroperoxide red 93.3 0.057 2E-06 51.6 4.2 34 21-54 145-178 (310)
286 3mog_A Probable 3-hydroxybutyr 93.2 0.081 2.8E-06 53.9 5.3 33 21-53 6-38 (483)
287 3ghy_A Ketopantoate reductase 93.2 0.085 2.9E-06 51.2 5.3 32 21-52 4-35 (335)
288 2xve_A Flavin-containing monoo 93.2 0.068 2.3E-06 54.5 4.8 36 20-55 197-232 (464)
289 1evy_A Glycerol-3-phosphate de 93.2 0.043 1.5E-06 54.1 3.1 31 22-52 17-47 (366)
290 2cdu_A NADPH oxidase; flavoenz 93.2 0.061 2.1E-06 54.7 4.4 37 20-56 149-185 (452)
291 3tl2_A Malate dehydrogenase; c 93.1 0.09 3.1E-06 50.3 5.1 34 19-52 7-41 (315)
292 2ew2_A 2-dehydropantoate 2-red 93.1 0.073 2.5E-06 51.1 4.6 32 21-52 4-35 (316)
293 3fg2_P Putative rubredoxin red 93.1 0.074 2.5E-06 53.1 4.8 38 20-57 142-179 (404)
294 3lxd_A FAD-dependent pyridine 93.1 0.072 2.5E-06 53.5 4.7 38 20-57 152-189 (415)
295 4dio_A NAD(P) transhydrogenase 93.1 0.086 2.9E-06 51.9 5.0 35 19-53 189-223 (405)
296 3cty_A Thioredoxin reductase; 93.0 0.17 6E-06 48.4 7.1 53 276-329 195-252 (319)
297 3l6d_A Putative oxidoreductase 93.0 0.12 4.1E-06 49.4 5.8 34 20-53 9-42 (306)
298 4a7p_A UDP-glucose dehydrogena 92.9 0.083 2.8E-06 53.2 4.8 35 20-54 8-42 (446)
299 2uyy_A N-PAC protein; long-cha 92.9 0.11 3.7E-06 50.0 5.5 34 20-53 30-63 (316)
300 1z82_A Glycerol-3-phosphate de 92.8 0.087 3E-06 51.1 4.7 33 20-52 14-46 (335)
301 2qyt_A 2-dehydropantoate 2-red 92.8 0.056 1.9E-06 51.9 3.3 32 20-51 8-45 (317)
302 3urh_A Dihydrolipoyl dehydroge 92.7 0.072 2.5E-06 54.8 4.2 37 20-56 198-234 (491)
303 3ntd_A FAD-dependent pyridine 92.7 0.082 2.8E-06 55.5 4.7 35 21-55 152-186 (565)
304 4dll_A 2-hydroxy-3-oxopropiona 92.7 0.096 3.3E-06 50.4 4.8 35 19-53 30-64 (320)
305 3l8k_A Dihydrolipoyl dehydroge 92.7 0.12 4E-06 52.8 5.6 35 20-54 172-206 (466)
306 3r9u_A Thioredoxin reductase; 92.7 0.15 5.1E-06 48.6 6.1 49 279-328 191-243 (315)
307 2q7v_A Thioredoxin reductase; 92.6 0.075 2.6E-06 51.2 3.9 34 20-53 152-185 (325)
308 1trb_A Thioredoxin reductase; 92.6 0.076 2.6E-06 51.0 3.9 36 20-55 145-180 (320)
309 2wtb_A MFP2, fatty acid multif 92.6 0.12 4.1E-06 55.6 5.7 33 21-53 313-345 (725)
310 3ab1_A Ferredoxin--NADP reduct 92.6 0.15 5.2E-06 49.8 6.1 57 272-329 203-263 (360)
311 1lld_A L-lactate dehydrogenase 92.6 0.1 3.5E-06 50.2 4.7 33 21-53 8-42 (319)
312 3dtt_A NADP oxidoreductase; st 92.6 0.1 3.6E-06 48.0 4.6 35 19-53 18-52 (245)
313 2a87_A TRXR, TR, thioredoxin r 92.5 0.079 2.7E-06 51.3 4.0 34 20-53 155-188 (335)
314 2gv8_A Monooxygenase; FMO, FAD 92.5 0.088 3E-06 53.4 4.5 36 20-55 212-248 (447)
315 2ewd_A Lactate dehydrogenase,; 92.5 0.1 3.4E-06 50.2 4.6 33 21-53 5-38 (317)
316 3ego_A Probable 2-dehydropanto 92.5 0.099 3.4E-06 50.0 4.5 32 21-53 3-34 (307)
317 3oc4_A Oxidoreductase, pyridin 92.5 0.096 3.3E-06 53.2 4.7 37 20-56 147-183 (452)
318 1bg6_A N-(1-D-carboxylethyl)-L 92.4 0.1 3.5E-06 51.1 4.7 32 21-52 5-36 (359)
319 2hjr_A Malate dehydrogenase; m 92.4 0.12 4.1E-06 49.9 5.0 33 21-53 15-48 (328)
320 3dgh_A TRXR-1, thioredoxin red 92.4 0.21 7.3E-06 51.1 7.2 44 18-61 7-59 (483)
321 1zcj_A Peroxisomal bifunctiona 92.4 0.087 3E-06 53.6 4.1 33 21-53 38-70 (463)
322 1kyq_A Met8P, siroheme biosynt 92.3 0.071 2.4E-06 49.6 3.1 35 19-53 12-46 (274)
323 3pef_A 6-phosphogluconate dehy 92.3 0.11 3.7E-06 49.2 4.5 33 21-53 2-34 (287)
324 4ap3_A Steroid monooxygenase; 92.3 0.081 2.8E-06 55.2 3.9 35 20-54 191-225 (549)
325 3dfz_A SIRC, precorrin-2 dehyd 92.3 0.12 4.2E-06 46.5 4.6 35 19-53 30-64 (223)
326 4e21_A 6-phosphogluconate dehy 92.3 0.11 3.9E-06 50.7 4.7 34 20-53 22-55 (358)
327 3hwr_A 2-dehydropantoate 2-red 92.3 0.11 3.7E-06 50.0 4.5 33 19-52 18-50 (318)
328 2x8g_A Thioredoxin glutathione 92.3 0.11 3.6E-06 55.0 4.9 32 21-52 287-318 (598)
329 2zbw_A Thioredoxin reductase; 92.3 0.3 1E-05 47.0 7.8 57 271-329 191-252 (335)
330 3p2y_A Alanine dehydrogenase/p 92.2 0.099 3.4E-06 51.0 4.1 35 19-53 183-217 (381)
331 2wpf_A Trypanothione reductase 92.2 0.09 3.1E-06 54.1 4.1 36 21-56 192-230 (495)
332 1mo9_A ORF3; nucleotide bindin 92.1 0.12 4E-06 53.7 4.9 36 21-56 215-250 (523)
333 1y6j_A L-lactate dehydrogenase 92.1 0.14 4.7E-06 49.2 5.0 35 19-53 6-42 (318)
334 4b1b_A TRXR, thioredoxin reduc 92.1 0.15 5.3E-06 52.8 5.7 34 20-53 223-256 (542)
335 3kkj_A Amine oxidase, flavin-c 92.1 0.043 1.5E-06 51.2 1.3 38 525-563 291-330 (336)
336 3pdu_A 3-hydroxyisobutyrate de 92.1 0.11 3.8E-06 49.1 4.3 33 21-53 2-34 (287)
337 1xdi_A RV3303C-LPDA; reductase 92.0 0.2 6.7E-06 51.6 6.4 37 20-56 182-218 (499)
338 1fec_A Trypanothione reductase 92.0 0.098 3.4E-06 53.8 4.1 36 21-56 188-226 (490)
339 1mv8_A GMD, GDP-mannose 6-dehy 92.0 0.11 3.9E-06 52.4 4.4 32 22-53 2-33 (436)
340 2vns_A Metalloreductase steap3 92.0 0.16 5.4E-06 45.7 4.9 34 20-53 28-61 (215)
341 3lad_A Dihydrolipoamide dehydr 91.9 0.12 4.2E-06 52.8 4.7 36 20-55 180-215 (476)
342 3dfu_A Uncharacterized protein 91.9 0.057 1.9E-06 48.9 1.8 34 19-52 5-38 (232)
343 2a9f_A Putative malic enzyme ( 91.9 0.12 4E-06 50.4 4.1 35 19-53 187-222 (398)
344 2v6b_A L-LDH, L-lactate dehydr 91.8 0.14 4.7E-06 48.9 4.6 32 22-53 2-35 (304)
345 3pid_A UDP-glucose 6-dehydroge 91.8 0.12 4.2E-06 51.5 4.4 33 20-53 36-68 (432)
346 4ezb_A Uncharacterized conserv 91.8 0.11 3.9E-06 49.8 4.1 34 20-53 24-58 (317)
347 4huj_A Uncharacterized protein 91.8 0.13 4.4E-06 46.5 4.2 33 21-53 24-57 (220)
348 3ktd_A Prephenate dehydrogenas 91.7 0.19 6.4E-06 48.7 5.4 35 19-53 7-41 (341)
349 2h78_A Hibadh, 3-hydroxyisobut 91.7 0.14 4.8E-06 48.8 4.6 33 21-53 4-36 (302)
350 1t2d_A LDH-P, L-lactate dehydr 91.6 0.17 6E-06 48.5 5.1 33 21-53 5-38 (322)
351 3ics_A Coenzyme A-disulfide re 91.6 0.14 4.7E-06 54.0 4.7 37 20-56 187-223 (588)
352 3qsg_A NAD-binding phosphogluc 91.6 0.12 4.2E-06 49.5 4.0 33 20-52 24-57 (312)
353 3qfa_A Thioredoxin reductase 1 91.5 0.18 6.1E-06 52.2 5.4 32 21-52 211-242 (519)
354 1txg_A Glycerol-3-phosphate de 91.5 0.12 4.2E-06 49.9 4.0 30 22-51 2-31 (335)
355 2o3j_A UDP-glucose 6-dehydroge 91.5 0.14 4.7E-06 52.4 4.4 33 21-53 10-44 (481)
356 1hyu_A AHPF, alkyl hydroperoxi 91.4 0.12 4.1E-06 53.6 3.9 33 21-53 356-388 (521)
357 3e8x_A Putative NAD-dependent 91.4 0.16 5.5E-06 46.3 4.4 34 20-53 21-55 (236)
358 2vdc_G Glutamate synthase [NAD 91.3 0.18 6.1E-06 51.2 5.0 34 20-53 264-298 (456)
359 3pqe_A L-LDH, L-lactate dehydr 91.2 0.17 5.7E-06 48.6 4.4 34 19-52 4-39 (326)
360 2pv7_A T-protein [includes: ch 91.2 0.24 8.2E-06 47.0 5.6 33 21-53 22-55 (298)
361 4gwg_A 6-phosphogluconate dehy 91.1 0.22 7.4E-06 50.6 5.4 34 20-53 4-37 (484)
362 3c24_A Putative oxidoreductase 91.1 0.22 7.4E-06 47.0 5.1 33 21-53 12-45 (286)
363 3l9w_A Glutathione-regulated p 91.1 0.21 7.1E-06 49.8 5.1 34 20-53 4-37 (413)
364 4g65_A TRK system potassium up 91.0 0.08 2.7E-06 53.7 2.1 34 20-53 3-36 (461)
365 4gbj_A 6-phosphogluconate dehy 91.0 0.16 5.4E-06 48.3 4.0 33 21-53 6-38 (297)
366 1yj8_A Glycerol-3-phosphate de 91.0 0.087 3E-06 52.0 2.3 34 21-54 22-62 (375)
367 3orq_A N5-carboxyaminoimidazol 91.0 0.29 9.9E-06 48.3 6.1 42 13-54 5-46 (377)
368 1guz_A Malate dehydrogenase; o 91.0 0.19 6.6E-06 48.0 4.6 32 22-53 2-35 (310)
369 1vl6_A Malate oxidoreductase; 90.9 0.17 5.8E-06 49.2 4.1 34 19-52 191-225 (388)
370 3vtf_A UDP-glucose 6-dehydroge 90.9 0.21 7E-06 50.0 4.9 35 19-53 20-54 (444)
371 1ur5_A Malate dehydrogenase; o 90.8 0.22 7.4E-06 47.6 4.8 33 21-53 3-36 (309)
372 2p4q_A 6-phosphogluconate dehy 90.7 0.25 8.6E-06 50.5 5.5 34 20-53 10-43 (497)
373 3f8d_A Thioredoxin reductase ( 90.7 0.19 6.4E-06 48.1 4.4 35 20-54 154-188 (323)
374 2izz_A Pyrroline-5-carboxylate 90.7 0.23 7.9E-06 47.8 4.9 33 21-53 23-59 (322)
375 3iwa_A FAD-dependent pyridine 90.7 0.17 5.7E-06 51.7 4.2 37 20-56 159-196 (472)
376 1jay_A Coenzyme F420H2:NADP+ o 90.6 0.19 6.7E-06 44.9 4.2 31 22-52 2-33 (212)
377 1x13_A NAD(P) transhydrogenase 90.6 0.19 6.3E-06 50.0 4.3 34 20-53 172-205 (401)
378 3ggo_A Prephenate dehydrogenas 90.6 0.26 8.8E-06 47.2 5.1 33 21-53 34-68 (314)
379 3gvi_A Malate dehydrogenase; N 90.6 0.25 8.5E-06 47.4 5.0 33 21-53 8-41 (324)
380 3oj0_A Glutr, glutamyl-tRNA re 90.5 0.078 2.7E-06 44.2 1.2 34 20-53 21-54 (144)
381 3q2o_A Phosphoribosylaminoimid 90.3 0.28 9.7E-06 48.6 5.4 43 12-54 6-48 (389)
382 3o0h_A Glutathione reductase; 90.3 0.22 7.6E-06 51.0 4.7 36 20-55 191-226 (484)
383 4dna_A Probable glutathione re 90.3 0.22 7.7E-06 50.6 4.7 36 20-55 170-205 (463)
384 1dlj_A UDP-glucose dehydrogena 90.3 0.16 5.6E-06 50.5 3.6 31 22-53 2-32 (402)
385 2gf2_A Hibadh, 3-hydroxyisobut 90.2 0.27 9.3E-06 46.5 5.0 32 22-53 2-33 (296)
386 4ffl_A PYLC; amino acid, biosy 90.1 0.27 9.3E-06 48.2 5.0 34 21-54 2-35 (363)
387 3cky_A 2-hydroxymethyl glutara 90.1 0.25 8.5E-06 46.9 4.6 33 21-53 5-37 (301)
388 1a5z_A L-lactate dehydrogenase 90.1 0.21 7E-06 48.0 4.0 32 22-53 2-35 (319)
389 1vdc_A NTR, NADPH dependent th 90.1 0.56 1.9E-05 45.0 7.2 55 271-329 70-124 (333)
390 2zyd_A 6-phosphogluconate dehy 90.0 0.25 8.7E-06 50.3 4.8 33 20-52 15-47 (480)
391 2pgd_A 6-phosphogluconate dehy 90.0 0.29 9.9E-06 50.0 5.3 33 21-53 3-35 (482)
392 3gt0_A Pyrroline-5-carboxylate 90.0 0.33 1.1E-05 44.6 5.2 33 21-53 3-39 (247)
393 1l7d_A Nicotinamide nucleotide 90.0 0.24 8.4E-06 48.9 4.5 35 19-53 171-205 (384)
394 1vpd_A Tartronate semialdehyde 89.9 0.25 8.5E-06 46.9 4.4 33 21-53 6-38 (299)
395 1yqg_A Pyrroline-5-carboxylate 89.8 0.23 7.9E-06 46.1 4.0 32 22-53 2-34 (263)
396 2f1k_A Prephenate dehydrogenas 89.8 0.28 9.4E-06 46.1 4.6 32 22-53 2-33 (279)
397 1wdk_A Fatty oxidation complex 89.7 0.22 7.6E-06 53.5 4.3 33 21-53 315-347 (715)
398 2q3e_A UDP-glucose 6-dehydroge 89.6 0.24 8.3E-06 50.4 4.3 33 21-53 6-40 (467)
399 2qrj_A Saccharopine dehydrogen 89.6 0.3 1E-05 47.8 4.6 40 19-58 213-257 (394)
400 2rcy_A Pyrroline carboxylate r 89.6 0.29 1E-05 45.3 4.6 34 21-54 5-42 (262)
401 1nyt_A Shikimate 5-dehydrogena 89.6 0.32 1.1E-05 45.4 4.8 32 21-52 120-151 (271)
402 3vku_A L-LDH, L-lactate dehydr 89.5 0.28 9.7E-06 47.0 4.4 34 19-52 8-43 (326)
403 2q1s_A Putative nucleotide sug 89.5 0.33 1.1E-05 47.8 5.1 48 6-53 18-67 (377)
404 3p7m_A Malate dehydrogenase; p 89.4 0.36 1.2E-05 46.2 5.1 33 21-53 6-39 (321)
405 1pjc_A Protein (L-alanine dehy 89.4 0.28 9.4E-06 48.1 4.4 33 21-53 168-200 (361)
406 3tri_A Pyrroline-5-carboxylate 89.3 0.42 1.4E-05 44.9 5.4 33 21-53 4-39 (280)
407 3ojo_A CAP5O; rossmann fold, c 89.3 0.27 9.4E-06 49.1 4.3 33 21-53 12-44 (431)
408 3phh_A Shikimate dehydrogenase 89.3 0.37 1.3E-05 44.7 4.9 34 20-53 118-151 (269)
409 2i6t_A Ubiquitin-conjugating e 89.2 0.28 9.6E-06 46.6 4.1 34 20-53 14-49 (303)
410 1hyh_A L-hicdh, L-2-hydroxyiso 89.1 0.27 9.1E-06 47.0 3.9 33 21-53 2-36 (309)
411 1jw9_B Molybdopterin biosynthe 89.1 0.28 9.5E-06 45.2 3.9 34 20-53 31-65 (249)
412 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.0 0.35 1.2E-05 49.3 5.0 32 21-52 2-33 (478)
413 3fbs_A Oxidoreductase; structu 89.0 0.23 7.9E-06 46.8 3.4 33 20-53 141-173 (297)
414 1x0v_A GPD-C, GPDH-C, glycerol 88.8 0.2 6.7E-06 49.0 2.8 34 21-54 9-49 (354)
415 3lzw_A Ferredoxin--NADP reduct 88.8 0.5 1.7E-05 45.3 5.7 50 278-329 196-250 (332)
416 4id9_A Short-chain dehydrogena 88.7 0.4 1.4E-05 46.5 5.0 36 19-54 18-54 (347)
417 3c7a_A Octopine dehydrogenase; 88.7 0.19 6.4E-06 50.2 2.6 31 21-51 3-34 (404)
418 2cvz_A Dehydrogenase, 3-hydrox 88.6 0.36 1.2E-05 45.4 4.5 31 22-53 3-33 (289)
419 3vrd_B FCCB subunit, flavocyto 88.6 0.24 8.2E-06 49.3 3.4 34 21-54 3-38 (401)
420 1oju_A MDH, malate dehydrogena 88.5 0.32 1.1E-05 45.9 4.0 32 22-53 2-35 (294)
421 3gpi_A NAD-dependent epimerase 88.4 0.51 1.7E-05 44.3 5.4 33 21-53 4-36 (286)
422 2g5c_A Prephenate dehydrogenas 88.3 0.41 1.4E-05 44.9 4.6 31 22-52 3-35 (281)
423 2eez_A Alanine dehydrogenase; 88.3 0.42 1.4E-05 46.9 4.8 33 21-53 167-199 (369)
424 3zwc_A Peroxisomal bifunctiona 88.3 0.31 1.1E-05 52.2 4.1 33 21-53 317-349 (742)
425 3nep_X Malate dehydrogenase; h 88.1 0.37 1.2E-05 46.0 4.1 32 22-53 2-35 (314)
426 1p77_A Shikimate 5-dehydrogena 88.1 0.32 1.1E-05 45.4 3.7 32 21-52 120-151 (272)
427 1cjc_A Protein (adrenodoxin re 88.1 0.36 1.2E-05 49.0 4.3 46 284-329 270-333 (460)
428 2jbv_A Choline oxidase; alcoho 88.1 0.31 1.1E-05 50.7 3.9 40 17-56 10-50 (546)
429 2gag_A Heterotetrameric sarcos 88.0 0.26 9E-06 55.1 3.5 36 21-56 285-320 (965)
430 3ldh_A Lactate dehydrogenase; 88.0 0.41 1.4E-05 45.8 4.3 34 20-53 21-56 (330)
431 1o94_A Tmadh, trimethylamine d 88.0 0.36 1.2E-05 52.2 4.5 33 21-53 529-563 (729)
432 2ahr_A Putative pyrroline carb 87.9 0.35 1.2E-05 44.7 3.9 33 21-53 4-36 (259)
433 3fi9_A Malate dehydrogenase; s 87.9 0.59 2E-05 45.1 5.5 33 20-52 8-43 (343)
434 2aef_A Calcium-gated potassium 87.8 0.19 6.6E-06 45.7 1.9 33 20-53 9-41 (234)
435 1i36_A Conserved hypothetical 87.8 0.38 1.3E-05 44.6 4.0 30 22-51 2-31 (264)
436 3k31_A Enoyl-(acyl-carrier-pro 87.8 0.57 2E-05 44.3 5.3 47 6-52 15-65 (296)
437 2iz1_A 6-phosphogluconate dehy 87.6 0.52 1.8E-05 48.0 5.1 32 21-52 6-37 (474)
438 2egg_A AROE, shikimate 5-dehyd 87.5 0.47 1.6E-05 44.9 4.5 32 21-52 142-174 (297)
439 3d1l_A Putative NADP oxidoredu 87.4 0.48 1.6E-05 44.0 4.5 33 21-53 11-44 (266)
440 4aj2_A L-lactate dehydrogenase 87.4 0.61 2.1E-05 44.7 5.2 34 19-52 18-53 (331)
441 3ew7_A LMO0794 protein; Q8Y8U8 87.4 0.52 1.8E-05 42.1 4.6 32 22-53 2-34 (221)
442 1yb4_A Tartronic semialdehyde 87.3 0.34 1.2E-05 45.8 3.4 32 21-53 4-35 (295)
443 1np3_A Ketol-acid reductoisome 87.3 0.62 2.1E-05 45.0 5.3 33 21-53 17-49 (338)
444 3u62_A Shikimate dehydrogenase 87.2 0.59 2E-05 43.0 4.8 32 22-53 110-142 (253)
445 3itj_A Thioredoxin reductase 1 87.2 1.2 4.1E-05 42.7 7.4 55 271-328 84-141 (338)
446 3nlc_A Uncharacterized protein 87.2 0.36 1.2E-05 50.0 3.7 41 19-59 106-146 (549)
447 1ldn_A L-lactate dehydrogenase 87.2 0.51 1.8E-05 45.1 4.6 34 20-53 6-41 (316)
448 2vhw_A Alanine dehydrogenase; 87.1 0.54 1.8E-05 46.3 4.8 34 20-53 168-201 (377)
449 1pjq_A CYSG, siroheme synthase 87.1 0.44 1.5E-05 48.2 4.2 33 20-52 12-44 (457)
450 2hk9_A Shikimate dehydrogenase 87.0 0.45 1.6E-05 44.5 4.0 32 21-52 130-161 (275)
451 3d0o_A L-LDH 1, L-lactate dehy 86.9 0.51 1.8E-05 45.1 4.4 33 20-52 6-40 (317)
452 3gem_A Short chain dehydrogena 86.8 0.54 1.9E-05 43.5 4.4 35 19-53 26-61 (260)
453 2zqz_A L-LDH, L-lactate dehydr 86.8 0.54 1.8E-05 45.1 4.5 36 17-52 6-43 (326)
454 3abi_A Putative uncharacterize 86.8 0.4 1.4E-05 47.0 3.6 36 16-52 12-47 (365)
455 3ius_A Uncharacterized conserv 86.7 0.43 1.5E-05 44.8 3.7 33 21-53 6-38 (286)
456 1gte_A Dihydropyrimidine dehyd 86.6 0.48 1.6E-05 53.4 4.6 33 21-53 333-366 (1025)
457 3obb_A Probable 3-hydroxyisobu 86.6 0.58 2E-05 44.3 4.6 33 21-53 4-36 (300)
458 3h2s_A Putative NADH-flavin re 86.6 0.59 2E-05 41.9 4.5 31 22-52 2-33 (224)
459 4b4o_A Epimerase family protei 86.5 0.67 2.3E-05 43.8 5.0 33 21-53 1-34 (298)
460 2d5c_A AROE, shikimate 5-dehyd 86.5 0.68 2.3E-05 42.9 4.9 32 22-53 118-149 (263)
461 3o38_A Short chain dehydrogena 86.5 0.72 2.5E-05 42.7 5.1 32 21-52 23-56 (266)
462 4a9w_A Monooxygenase; baeyer-v 86.4 0.42 1.4E-05 46.3 3.6 33 20-53 163-195 (357)
463 4hv4_A UDP-N-acetylmuramate--L 86.4 0.48 1.6E-05 48.6 4.1 35 19-53 21-56 (494)
464 2rir_A Dipicolinate synthase, 86.2 0.66 2.3E-05 44.0 4.8 34 20-53 157-190 (300)
465 1edz_A 5,10-methylenetetrahydr 86.1 0.61 2.1E-05 44.3 4.4 33 20-52 177-210 (320)
466 3don_A Shikimate dehydrogenase 86.0 0.59 2E-05 43.6 4.2 33 21-53 118-151 (277)
467 2r6j_A Eugenol synthase 1; phe 86.0 0.8 2.7E-05 43.7 5.3 33 21-53 12-45 (318)
468 3d4o_A Dipicolinate synthase s 85.7 0.72 2.5E-05 43.5 4.7 34 20-53 155-188 (293)
469 2yjz_A Metalloreductase steap4 85.7 0.16 5.4E-06 45.1 0.0 34 20-53 19-52 (201)
470 1w4x_A Phenylacetone monooxyge 85.3 0.56 1.9E-05 48.8 4.1 34 21-54 187-220 (542)
471 1ez4_A Lactate dehydrogenase; 85.2 0.69 2.4E-05 44.2 4.3 33 20-52 5-39 (318)
472 2d4a_B Malate dehydrogenase; a 85.1 0.74 2.5E-05 43.8 4.5 32 22-53 1-33 (308)
473 3k30_A Histamine dehydrogenase 85.1 0.61 2.1E-05 50.1 4.4 34 21-54 524-559 (690)
474 1mld_A Malate dehydrogenase; o 84.9 0.66 2.3E-05 44.3 4.0 32 22-53 2-36 (314)
475 3ond_A Adenosylhomocysteinase; 84.8 0.78 2.7E-05 46.2 4.6 33 21-53 266-298 (488)
476 3i6i_A Putative leucoanthocyan 84.8 0.89 3E-05 44.0 5.1 33 21-53 11-44 (346)
477 1ju2_A HydroxynitrIle lyase; f 84.5 0.45 1.5E-05 49.4 2.8 58 277-335 200-266 (536)
478 3fbt_A Chorismate mutase and s 84.4 0.9 3.1E-05 42.5 4.6 34 20-53 122-156 (282)
479 3pwz_A Shikimate dehydrogenase 84.3 1 3.4E-05 42.0 4.9 33 20-52 120-153 (272)
480 3b1f_A Putative prephenate deh 84.2 0.78 2.7E-05 43.2 4.2 32 21-52 7-40 (290)
481 3r6d_A NAD-dependent epimerase 84.2 1.2 4.1E-05 39.8 5.3 32 22-53 7-40 (221)
482 3rkr_A Short chain oxidoreduct 84.1 0.74 2.5E-05 42.6 3.9 41 10-52 21-62 (262)
483 3tnl_A Shikimate dehydrogenase 84.0 0.99 3.4E-05 42.9 4.8 33 20-52 154-187 (315)
484 3dhn_A NAD-dependent epimerase 84.0 0.71 2.4E-05 41.5 3.7 33 21-53 5-38 (227)
485 1b8p_A Protein (malate dehydro 84.0 0.63 2.2E-05 44.8 3.5 33 20-52 5-45 (329)
486 2wyu_A Enoyl-[acyl carrier pro 83.9 0.78 2.7E-05 42.4 4.0 33 21-53 9-44 (261)
487 1hdo_A Biliverdin IX beta redu 83.9 0.9 3.1E-05 39.9 4.3 33 21-53 4-37 (206)
488 3jyo_A Quinate/shikimate dehyd 83.9 1.1 3.6E-05 42.1 4.9 33 20-52 127-160 (283)
489 1leh_A Leucine dehydrogenase; 83.9 1 3.4E-05 43.9 4.8 32 21-52 174-205 (364)
490 1nvt_A Shikimate 5'-dehydrogen 83.9 0.7 2.4E-05 43.5 3.7 31 21-52 129-159 (287)
491 4gx0_A TRKA domain protein; me 83.8 0.93 3.2E-05 47.3 5.0 34 21-54 349-382 (565)
492 1zud_1 Adenylyltransferase THI 83.7 0.98 3.4E-05 41.5 4.5 34 20-53 28-62 (251)
493 3vps_A TUNA, NAD-dependent epi 83.5 1.1 3.7E-05 42.6 5.0 35 20-54 7-42 (321)
494 1lqt_A FPRA; NADP+ derivative, 83.5 0.8 2.7E-05 46.4 4.2 44 284-329 265-326 (456)
495 3h8v_A Ubiquitin-like modifier 83.4 0.75 2.6E-05 43.2 3.6 34 20-53 36-70 (292)
496 3sx6_A Sulfide-quinone reducta 83.4 0.91 3.1E-05 45.6 4.6 52 271-326 208-266 (437)
497 3o8q_A Shikimate 5-dehydrogena 83.4 1 3.4E-05 42.2 4.4 33 20-52 126-159 (281)
498 1smk_A Malate dehydrogenase, g 83.3 0.75 2.6E-05 44.2 3.7 33 21-53 9-44 (326)
499 3rui_A Ubiquitin-like modifier 83.3 1.1 3.7E-05 43.0 4.7 35 19-53 33-68 (340)
500 4g6h_A Rotenone-insensitive NA 83.2 0.7 2.4E-05 47.5 3.6 35 22-56 219-267 (502)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.1e-64 Score=534.66 Aligned_cols=483 Identities=22% Similarity=0.315 Sum_probs=307.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhh--hhhHhhhcc--ccccCce
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLL--RPSVIRELE--LKKHGLK 96 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~--~~~~~~~l~--l~~~g~~ 96 (565)
++|||||||++||+||++|+++|++|+|||+++++||++.|+. .+||.||.|++++... ..++++.++ +.+. ++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~~~~~~l~~~~g~~~~~~-~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDPSAIEELFALAGKQLKEY-VE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCTHHHHHHHHTTTCCGGGT-CC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCchhHHHHHHHhcchhhhc-ee
Confidence 5799999999999999999999999999999999999999987 7899999999875332 224566655 3333 78
Q ss_pred eecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCc-CCCchhhhhhh
Q 038727 97 LLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEAL-HGDLSFHDLLR 175 (565)
Q Consensus 97 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 175 (565)
+.+.++.+...+.+|+.+.++.+.......+.++++.+.+.+.++.+..+.... ....... ....++.+.+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 151 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFK-------EGYLKLGTVPFLSFRDML- 151 (501)
T ss_dssp EEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTS-------SSCC--CCCCCCCHHHHH-
T ss_pred eEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhh-------hhhhhccccccchhhhhh-
Confidence 888888888888899999999999988888888888887777776655443321 1110000 0000111100
Q ss_pred hhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHHH-hccCCCCCCChhHHHHHHHHhc
Q 038727 176 DKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAI-TGSMASIHAPGSGYVLLHHVMG 254 (565)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 254 (565)
...... ..+ ....++.+.+.+++.++.+++++..... .+. .+....+.+.++.+.
T Consensus 152 -------------~~~~~~--~~l-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~--~p~~~~~~~~~~~~~-- 207 (501)
T 4dgk_A 152 -------------RAAPQL--AKL-----QAWRSVYSKVASYIEDEHLRQAFSFHSLLVGG--NPFATSSIYTLIHAL-- 207 (501)
T ss_dssp -------------HSGGGT--TTS-----HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHS--CC--CCCTHHHHHHH--
T ss_pred -------------hhhhhh--hhh-----hhcccHHHHHHHHhccHHHHhhhhhhhcccCC--Ccchhhhhhhhhhhh--
Confidence 000000 000 0224667888999999999998876543 332 444445555555544
Q ss_pred cccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhc
Q 038727 255 ETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGL 334 (565)
Q Consensus 255 ~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l 334 (565)
....|.| +|+||++.|+++|++.++++|++|++|++|++|..++ +++++|+++||+++.||.||+|++++.++..|
T Consensus 208 --~~~~G~~-~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 208 --EREWGVW-FPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLEDGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp --HSCCCEE-EETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSCEEECCC--------
T ss_pred --hccCCeE-EeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecCCcEEEcCEEEECCCHHHHHHHh
Confidence 3455777 9999999999999999999999999999999999999 99999999999999999999999999988888
Q ss_pred CCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCC
Q 038727 335 VPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRP 414 (565)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 414 (565)
++..+.+....+.++...++.+.++++++++..++.. .+| ++++..+..+.+++.+ ..+.+++++
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l----------~~~--~i~~~~~~~~~~~~~~---~~~~~~~~~ 348 (501)
T 4dgk_A 284 LSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQL----------AHH--TVCFGPRYRELIDEIF---NHDGLAEDF 348 (501)
T ss_dssp -------------------CCEEEEEEEEESSCCTTS----------CSE--EEEEECC----------------CCCEE
T ss_pred ccccccchhhhhhhhccccCCceeEEEecccCCcccc----------ccc--eeccccchhhhccccc---cccccccCC
Confidence 8887777778888898889999999999999864321 233 7777666555554443 356678889
Q ss_pred eEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHh-CCCCCCcEeEEEeCChhhHHH
Q 038727 415 VMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEY-APGFSSSVIGYDLLTPPDLER 493 (565)
Q Consensus 415 ~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~-~P~~~~~i~~~~~~tp~t~~~ 493 (565)
++++++|+..||+++|+|+++++++++ .|+..+. ..++++.|+++.+++++.|++. +|+++++|+..++.||.||++
T Consensus 349 ~~~v~~~s~~dp~~ap~G~~~~~~~~~-~p~~~~~-~~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~ 426 (501)
T 4dgk_A 349 SLYLHAPCVTDSSLAPEGCGSYYVLAP-VPHLGTA-NLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRD 426 (501)
T ss_dssp EEEEECGGGTCGGGSSTTCEEEEEEEE-ECCTTTS-CCCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC-
T ss_pred ceecccCCCCCCCcCCCCCceEEEEEe-cCccccc-cccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHH
Confidence 999999999999999999999988764 3432211 2334467899999999999875 699999999999999999999
Q ss_pred HcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHhhh
Q 038727 494 EFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDFKK 562 (565)
Q Consensus 494 ~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~~~ 562 (565)
+++.++|++||+.+.+.|..++||. +..|||+||||||+|++||+|++|| ||++||++|++||.-
T Consensus 427 ~~~~~~G~~~g~~~~~~q~~~~RP~----~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 427 QLNAYHGSAFSVEPVLTQSAWFRPH----NRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp ---------------------------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC-
T ss_pred HcCCCCccccChhcchhhccccCCC----CCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999988998888982 4568999999999999999999997 999999999999853
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.3e-36 Score=311.70 Aligned_cols=398 Identities=21% Similarity=0.237 Sum_probs=256.4
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhh-h----hhhhHhhhccccccCc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS-L----LRPSVIRELELKKHGL 95 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~-~----~~~~~~~~l~l~~~g~ 95 (565)
+||||||||++||+||++|+++|++|+|||+++++||++.++. ..|+.+|.|+..+. . ...++++++|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~--- 76 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASV--- 76 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCC---
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCc---
Confidence 5899999999999999999999999999999999999998876 78999999974321 1 1235777777642
Q ss_pred eeecCCCceeee-cCC--------CcEEEEcCChHHHHHHHhc-cchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcC
Q 038727 96 KLLKPIATSFTP-CLD--------GLYLLLGFDDQQNNSEISK-FSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALH 165 (565)
Q Consensus 96 ~~~~~~~~~~~~-~~~--------g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (565)
++...+...... ..+ +....+. . +.. +...+ .. .....+........
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~---------~~-~~~~~~~~~~~~~~----- 133 (425)
T 3ka7_A 77 NIVRSEMTTVRVPLKKGNPDYVKGFKDISFN-D-------FPSLLSYKD---------RM-KIALLIVSTRKNRP----- 133 (425)
T ss_dssp CEEECCCCEEEEESSTTCCSSTTCEEEEEGG-G-------GGGGSCHHH---------HH-HHHHHHHHTTTSCC-----
T ss_pred eEEecCCceEEeecCCCcccccccccceehh-h-------hhhhCCHHH---------HH-HHHHHHHhhhhcCC-----
Confidence 233222111111 011 1111110 0 000 00000 00 00011100000000
Q ss_pred CCchhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHH--HhccCCCCCCCh
Q 038727 166 GDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA--ITGSMASIHAPG 243 (565)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~g~~~~~~~~~ 243 (565)
...++.+++.+++.++.++.++.... .++. .++..+
T Consensus 134 ----------------------------------------~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s 171 (425)
T 3ka7_A 134 ----------------------------------------SGSSLQAWIKSQVSDEWLIKFADSFCGWALSL--KSDEVP 171 (425)
T ss_dssp ----------------------------------------CSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSS--CGGGSB
T ss_pred ----------------------------------------CCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCC--Ccccch
Confidence 12466677777777777776654322 2332 233333
Q ss_pred h--HHHHHHHHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEE
Q 038727 244 S--GYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFV 321 (565)
Q Consensus 244 ~--~~~~~~~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~V 321 (565)
. .+..+.... ...+.+ ++.||++.++++|++.++++|++|+++++|++|..++ +++++|+++ |+++.||.|
T Consensus 172 ~~~~~~~~~~~~----~~~~~~-~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~-g~~~~ad~V 244 (425)
T 3ka7_A 172 VEEVFEIIENMY----RFGGTG-IPEGGCKGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIAD-DRIHDADLV 244 (425)
T ss_dssp HHHHHHHHHHHH----HHCSCE-EETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEET-TEEEECSEE
T ss_pred HHHHHHHHHHHH----hcCCcc-ccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEEC-CEEEECCEE
Confidence 2 222222211 112344 8999999999999999999999999999999999998 888888876 678999999
Q ss_pred EECCChHHHHhhcCCC-CCC--CHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHH
Q 038727 322 LSNATPYKTFMGLVPR-DVL--PDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEI 398 (565)
Q Consensus 322 I~a~~~~~~~~~l~~~-~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (565)
|+|++++.+ .+|+++ ..+ ++++.++++++.++ +.+++++.+++++ + .++ .+++..+
T Consensus 245 V~a~~~~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~~~~-~-----------~~~--~~~~~~~----- 303 (425)
T 3ka7_A 245 ISNLGHAAT-AVLCSEALSKEADAAYFKMVGTLQPS-AGIKICLAADEPL-V-----------GHT--GVLLTPY----- 303 (425)
T ss_dssp EECSCHHHH-HHHTTTTCCTTTTHHHHHHHHHCCCB-EEEEEEEEESSCS-S-----------CSS--SEEECCS-----
T ss_pred EECCCHHHH-HHhcCCcccccCCHHHHHHhhCcCCC-ceEEEEeecCCCc-c-----------CcC--EEEECCC-----
Confidence 999999986 678864 334 78888999999885 6789999998863 1 112 4555332
Q ss_pred HHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCC
Q 038727 399 GSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSS 478 (565)
Q Consensus 399 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~ 478 (565)
..+...++++|..||+++|+|+++++++.. .+ |+..+..++..+++++.|++++|+.+.
T Consensus 304 -------------~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~-~~-------~~~~~~~~~~~~~~~~~l~~~~p~~~~ 362 (425)
T 3ka7_A 304 -------------TRRINGVNEVTQADPELAPPGKHLTMCHQY-VA-------PENVKNLESEIEMGLEDLKEIFPGKRY 362 (425)
T ss_dssp -------------SSSEEEEECGGGTCGGGSCTTCEEEEEEEE-EC-------GGGGGGHHHHHHHHHHHHHHHSTTCCE
T ss_pred -------------hhhcceEEeccCCCCCcCCCCCeEEEEEec-cc-------cccccchHHHHHHHHHHHHHhCCCCce
Confidence 123556889999999999999999887632 22 222222355579999999999999543
Q ss_pred cEeEEEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCC--CCCccCc--chHHHHH
Q 038727 479 SVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHP--GGGVMGA--PGRNAAH 554 (565)
Q Consensus 479 ~i~~~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~--g~g~~~a--sg~~aa~ 554 (565)
.++ .+. .|.. ..|...+ . ...+| ..+||++|||+||||+++ |.|+++| ||+.||+
T Consensus 363 ~~~--~v~---~~~~--~~P~~~~---~------~~~~~-----~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~ 421 (425)
T 3ka7_A 363 EVL--LIQ---SYHD--EWPVNRA---A------SGTDP-----GNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVME 421 (425)
T ss_dssp EEE--EEE---EEBT--TBCSBSS---C------TTCCC-----CSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHH
T ss_pred EEE--EEE---EECC--Ccccccc---c------cCCCC-----CCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHH
Confidence 333 332 2321 1111111 0 01244 678999999999999988 6677776 9999999
Q ss_pred HHH
Q 038727 555 VVL 557 (565)
Q Consensus 555 ~i~ 557 (565)
+|+
T Consensus 422 ~i~ 424 (425)
T 3ka7_A 422 KVL 424 (425)
T ss_dssp C--
T ss_pred Hhh
Confidence 886
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=9.3e-35 Score=299.03 Aligned_cols=389 Identities=19% Similarity=0.216 Sum_probs=249.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhh-----hhhhHhhhccccccCc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSL-----LRPSVIRELELKKHGL 95 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~-----~~~~~~~~l~l~~~g~ 95 (565)
+||||||||++||+||++|+++|++|+||||++++||++.++. ..|+.+|.|+..+.. ...++++++++. .
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~---~ 76 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAK---V 76 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCC---C
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCc---c
Confidence 4899999999999999999999999999999999999998876 689999999743211 223577777663 3
Q ss_pred eeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhhh
Q 038727 96 KLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLR 175 (565)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (565)
++.+.++.....+ +|..+.+... +..+.+.+...+..+.... ... ... .
T Consensus 77 ~~~~~~~~~~~~~-~g~~~~~~~~-------~~~l~~~~~~~~~~~~~~~-------~~~--~~~-~------------- 125 (421)
T 3nrn_A 77 EIVNSNPKGKILW-EGKIFHYRES-------WKFLSVKEKAKALKLLAEI-------RMN--KLP-K------------- 125 (421)
T ss_dssp CEEECSSSCEEEE-TTEEEEGGGG-------GGGCC--------CCHHHH-------HTT--CCC-C-------------
T ss_pred eEEECCCCeEEEE-CCEEEEcCCc-------hhhCCHhHHHHHHHHHHHH-------Hhc--cCC-C-------------
Confidence 3444444333333 4544443321 1111111111111000000 000 000 0
Q ss_pred hhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcc-cCChHHHHHHHHHH--HhccCCCCCCChh--HHHHHH
Q 038727 176 DKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKW-FESDVLKATVAADA--ITGSMASIHAPGS--GYVLLH 250 (565)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~~~~--~~g~~~~~~~~~~--~~~~~~ 250 (565)
...++.+++.++ +.++.++.++.... +++. .+...+. .+..+.
T Consensus 126 ------------------------------~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 173 (421)
T 3nrn_A 126 ------------------------------EEIPADEWIKEKIGENEFLLSVLESFAGWADSV--SLSDLTALELAKEIR 173 (421)
T ss_dssp ------------------------------CCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSS--CGGGSBHHHHHHHHH
T ss_pred ------------------------------CCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCC--CcccCCHHHHHHHHH
Confidence 114556666666 67776666554321 2232 2333332 222222
Q ss_pred HHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 251 HVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 251 ~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
... ...+.+ ++.||++.++++|++.++++|++|+++++|++|..++ +++ | +.+|+++.||.||+|++++.+
T Consensus 174 ~~~----~~~g~~-~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 174 AAL----RWGGPG-LIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHH----HHCSCE-EETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHh----hcCCcc-eecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--E-EeCCcEEEeCEEEECCCHHHH
Confidence 211 112344 8999999999999999999999999999999999887 776 5 456778999999999999986
Q ss_pred HhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCC
Q 038727 331 FMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLP 410 (565)
Q Consensus 331 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 410 (565)
.+|++.+.+|+.+.++++++.++ +++++++++++++ . .++ ++++.++.
T Consensus 245 -~~ll~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~~~~-~-----------~~~--~~~~~~~~---------------- 292 (421)
T 3nrn_A 245 -VKLIGRDYFDRDYLKQVDSIEPS-EGIKFNLAVPGEP-R-----------IGN--TIVFTPGL---------------- 292 (421)
T ss_dssp -HHHHCGGGSCHHHHHHHHTCCCC-CEEEEEEEEESSC-S-----------SCS--SEEECTTS----------------
T ss_pred -HHhcCcccCCHHHHHHHhCCCCC-ceEEEEEEEcCCc-c-----------cCC--eEEEcCCc----------------
Confidence 68887555788888899999986 8999999998863 2 122 55554321
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhh
Q 038727 411 SRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPD 490 (565)
Q Consensus 411 ~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t 490 (565)
. ...++++++.||+++|+|+++++++.. .+. .+ .++..+.+++.|++++| ...+.....
T Consensus 293 -~--~~~i~~~s~~~p~~ap~G~~~~~~~~~-~~~-------~~---~~~~~~~~~~~L~~~~p--~~~~~~~~~----- 351 (421)
T 3nrn_A 293 -M--INGFNEPSALDKSLAREGYTLIMAHMA-LKN-------GN---VKKAIEKGWEELLEIFP--EGEPLLAQV----- 351 (421)
T ss_dssp -S--SCEEECGGGTCGGGSCTTEEEEEEEEE-CTT-------CC---HHHHHHHHHHHHHHHCT--TCEEEEEEE-----
T ss_pred -c--eeeEeccCCCCCCcCCCCceEEEEEEe-ecc-------cc---HHHHHHHHHHHHHHHcC--CCeEEEeee-----
Confidence 1 225788999999999999998888642 221 11 23448999999999999 322222221
Q ss_pred HHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCc--cCc--chHHHHHHH
Q 038727 491 LEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGV--MGA--PGRNAAHVV 556 (565)
Q Consensus 491 ~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~--~~a--sg~~aa~~i 556 (565)
|.. +.|. |+... ..++ . .++ +|||+|||++.+++|+ ++| ||++||++|
T Consensus 352 ~~~--~~p~---~~~~~------~~~~-----~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 352 YRD--GNPV---NRTRA------GLHI-----E-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp C------------------------CC-----C-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccC--CCCc---ccccC------CCCC-----C-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 221 1110 10000 0122 3 678 9999999999877678 777 999999998
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=2.3e-32 Score=288.80 Aligned_cols=436 Identities=19% Similarity=0.151 Sum_probs=259.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccccCc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKHGL 95 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~g~ 95 (565)
.++||||||||++||+||+.|+++|++|+|||+++++||++.+....+|+.+|.|++++....+ ++++++|+...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~-- 80 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETY-- 80 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEE--
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcce--
Confidence 3479999999999999999999999999999999999999998774358999999876544333 45666655422
Q ss_pred eeecCCCceeeecCCCcEEEEcCChHHHHHHHhc-cchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhh
Q 038727 96 KLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISK-FSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLL 174 (565)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (565)
....+ .....+.+|+.+.+... +.. ..+.....+..+... +..+......... +..
T Consensus 81 -~~~~~-~~~~~~~~g~~~~~~~~-------~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~-- 137 (520)
T 1s3e_A 81 -KVNEV-ERLIHHVKGKSYPFRGP-------FPPVWNPITYLDHNNFWRT-------MDDMGREIPSDAP-----WKA-- 137 (520)
T ss_dssp -ECCCS-SEEEEEETTEEEEECSS-------SCCCCSHHHHHHHHHHHHH-------HHHHHTTSCTTCG-----GGS--
T ss_pred -ecccC-CceEEEECCEEEEecCC-------CCCCCCHHHHHHHHHHHHH-------HHHHHhhcCcCCC-----ccc--
Confidence 11111 11112224443333221 000 111111111111111 1111111110000 000
Q ss_pred hhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH--HHhccCCCCCCChhHHHHHHHH
Q 038727 175 RDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD--AITGSMASIHAPGSGYVLLHHV 252 (565)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~ 252 (565)
.....+...++.+++.+.+.++.++.++... .+++. .+...+..+.+....
T Consensus 138 -------------------------~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~--~~~~~s~~~~~~~~~ 190 (520)
T 1s3e_A 138 -------------------------PLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTA--ETHEVSALWFLWYVK 190 (520)
T ss_dssp -------------------------TTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSS--CTTTSBHHHHHHHHH
T ss_pred -------------------------cchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCC--ChHHhHHHHHHHHHh
Confidence 0111235678899999988888887776543 23443 344444333322111
Q ss_pred hcc------ccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCC
Q 038727 253 MGE------TDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNAT 326 (565)
Q Consensus 253 ~~~------~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~ 326 (565)
... .....+.+.++.||++.++++|++.+ |++|++|++|++|..++ +++. |++.+|+++.||+||+|++
T Consensus 191 ~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~VI~a~p 265 (520)
T 1s3e_A 191 QCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLL---GDRVKLERPVIYIDQTR-ENVL-VETLNHEMYEAKYVISAIP 265 (520)
T ss_dssp TTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHH---GGGEESSCCEEEEECSS-SSEE-EEETTSCEEEESEEEECSC
T ss_pred hcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHc---CCcEEcCCeeEEEEECC-CeEE-EEECCCeEEEeCEEEECCC
Confidence 000 00112233488999999999997765 78999999999999887 7777 8899998899999999999
Q ss_pred hHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhh
Q 038727 327 PYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAW 406 (565)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (565)
+..+ .+++..+.+|+...+.++++.++ ++.++++.++++. |. +. ...+.++...
T Consensus 266 ~~~l-~~l~~~p~lp~~~~~~i~~~~~~-~~~kv~l~~~~~~-w~-------~~--~~~g~~~~~~-------------- 319 (520)
T 1s3e_A 266 PTLG-MKIHFNPPLPMMRNQMITRVPLG-SVIKCIVYYKEPF-WR-------KK--DYCGTMIIDG-------------- 319 (520)
T ss_dssp GGGG-GGSEEESCCCHHHHHHTTSCCBC-CEEEEEEECSSCG-GG-------GG--TEEEEEEECS--------------
T ss_pred HHHH-cceeeCCCCCHHHHHHHHhCCCc-ceEEEEEEeCCCc-cc-------CC--CCCceeeccC--------------
Confidence 9884 67765566899989999999884 8899999998752 32 11 1122333311
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC-CcEeEEEe
Q 038727 407 NGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS-SSVIGYDL 485 (565)
Q Consensus 407 ~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~ 485 (565)
...+..++.. ++..+.+..+++.++...+.. .|.. ..++++.+.+++.|++++|.-. .......+
T Consensus 320 ----~~~~~~~~~d-----~~~~~~~~~~l~~~~~~~~a~----~~~~-~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~ 385 (520)
T 1s3e_A 320 ----EEAPVAYTLD-----DTKPEGNYAAIMGFILAHKAR----KLAR-LTKEERLKKLCELYAKVLGSLEALEPVHYEE 385 (520)
T ss_dssp ----TTCSCSEEEE-----CCCTTSCSCEEEEEEETHHHH----HHTT-SCHHHHHHHHHHHHHHHHTCGGGGCCSEEEE
T ss_pred ----CCCceEEEee-----CCCCCCCCCEEEEEccchhhh----hhhc-CCHHHHHHHHHHHHHHHhCccccCCccEEEE
Confidence 1122223322 222233345666654322211 2332 1468899999999999987521 11111111
Q ss_pred CChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCC---CCCCCccCc--chHHHHHHHHHHh
Q 038727 486 LTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGS---HPGGGVMGA--PGRNAAHVVLQDF 560 (565)
Q Consensus 486 ~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~---~~g~g~~~a--sg~~aa~~i~~~~ 560 (565)
.+|.+. ....|++.+. ..+.+....++ ..++|++||||||+++ ++| +++|| ||++||++|++.+
T Consensus 386 ---~~W~~~-~~~~G~~~~~-~~~g~~~~~~~-----~l~~p~~~L~fAG~~t~~~~~g-~v~GAi~SG~~aA~~i~~~l 454 (520)
T 1s3e_A 386 ---KNWCEE-QYSGGCYTTY-FPPGILTQYGR-----VLRQPVDRIYFAGTETATHWSG-YMEGAVEAGERAAREILHAM 454 (520)
T ss_dssp ---EEGGGC-TTTCSSSCBC-CCTTHHHHHGG-----GTTCCBTTEEECSGGGCSSSTT-SHHHHHHHHHHHHHHHHHHT
T ss_pred ---EeeCCC-CCCCCCCccc-cCCCccccchH-----HHhCCCCCEEEeehhhcCcCcE-EhHHHHHHHHHHHHHHHHHH
Confidence 124332 3344543311 11222212233 4577899999999987 444 78887 9999999999988
Q ss_pred hh
Q 038727 561 KK 562 (565)
Q Consensus 561 ~~ 562 (565)
++
T Consensus 455 ~~ 456 (520)
T 1s3e_A 455 GK 456 (520)
T ss_dssp TS
T ss_pred hc
Confidence 65
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.1e-32 Score=286.45 Aligned_cols=426 Identities=15% Similarity=0.142 Sum_probs=243.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccccCc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKHGL 95 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~g~ 95 (565)
.++||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++....+ ++++++|+... +
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~-~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR-I 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG-E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce-e
Confidence 457999999999999999999999999999999999999999987 579999999977654333 57788877543 2
Q ss_pred eeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhhh
Q 038727 96 KLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLR 175 (565)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (565)
............+.+|+.+.++.+... +.... ...+... ...+...+...... .
T Consensus 93 ~~~~~~~~~~~~~~~g~~~~~p~~~~~----~~~~~---~~~~~~~-------~~~~~~~~~~~~~~--~---------- 146 (478)
T 2ivd_A 93 RAADPAAKRRYVYTRGRLRSVPASPPA----FLASD---ILPLGAR-------LRVAGELFSRRAPE--G---------- 146 (478)
T ss_dssp ECSCSSCCCEEEEETTEEEECCCSHHH----HHTCS---SSCHHHH-------HHHHGGGGCCCCCT--T----------
T ss_pred eecCccccceEEEECCEEEECCCCHHH----hccCC---CCCHHHH-------HHHhhhhhcCCCCC--C----------
Confidence 221111112223335655555444211 11100 0000000 11111111111000 0
Q ss_pred hhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH--HHhccCCCCCCChhHHHH--H--
Q 038727 176 DKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD--AITGSMASIHAPGSGYVL--L-- 249 (565)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~g~~~~~~~~~~~~~~--~-- 249 (565)
...++.+++.+.+.++.++.++... ..++. .++..+....+ +
T Consensus 147 ------------------------------~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~ 194 (478)
T 2ivd_A 147 ------------------------------VDESLAAFGRRHLGHRATQVLLDAVQTGIYAG--DVEQLSVAATFPMLVK 194 (478)
T ss_dssp ------------------------------CCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCC--CTTTBBHHHHCHHHHH
T ss_pred ------------------------------CCCCHHHHHHHhhCHHHHHHHHHHHhceeecC--CHHHhhHHHHhHHHHH
Confidence 1234444444444433333333211 11221 22222211100 0
Q ss_pred ---------HHHhcc--------c-cCCC----ccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeE
Q 038727 250 ---------HHVMGE--------T-DGDR----NLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDG 307 (565)
Q Consensus 250 ---------~~~~~~--------~-~~~~----g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~ 307 (565)
...... . .... +.+.+++||++.|+++|++.+ |++|+++++|++|..++ +++ .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~-~ 269 (478)
T 2ivd_A 195 MEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARED-GGW-R 269 (478)
T ss_dssp HHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---CC-E
T ss_pred HHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecC-CeE-E
Confidence 000000 0 0001 333489999999999998876 67999999999999887 665 4
Q ss_pred EEe---CCCcEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCcc
Q 038727 308 VLL---VDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHH 384 (565)
Q Consensus 308 V~~---~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 384 (565)
|++ .+|+++.||+||+|+++..+ .+|+++ +++...+.++++.+. +++++++.++++. |. . +..
T Consensus 270 v~~~~~~~g~~~~ad~vV~a~~~~~~-~~ll~~--l~~~~~~~l~~~~~~-~~~~v~l~~~~~~-~~-------~--~~~ 335 (478)
T 2ivd_A 270 LIIEEHGRRAELSVAQVVLAAPAHAT-AKLLRP--LDDALAALVAGIAYA-PIAVVHLGFDAGT-LP-------A--PDG 335 (478)
T ss_dssp EEEEETTEEEEEECSEEEECSCHHHH-HHHHTT--TCHHHHHHHHTCCBC-CEEEEEEEECTTS-SC-------C--CCS
T ss_pred EEEeecCCCceEEcCEEEECCCHHHH-HHHhhc--cCHHHHHHHhcCCCC-cEEEEEEEEcccc-CC-------C--CCc
Confidence 877 67778999999999999885 678754 788888999999985 8999999998753 31 1 011
Q ss_pred ccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHH
Q 038727 385 TATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQK 464 (565)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 464 (565)
. ..+++.. ...+...+.+++..++.++|+|..++++++... +. ..|. ...++++.+.
T Consensus 336 ~-~~~~~~~-----------------~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~-~~---~~~~-~~~~~~~~~~ 392 (478)
T 2ivd_A 336 F-GFLVPAE-----------------EQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGA-RQ---PGLV-EQDEDALAAL 392 (478)
T ss_dssp S-EEECCGG-----------------GCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECT-TC---GGGG-GSCHHHHHHH
T ss_pred e-EEEecCC-----------------CCCceEEEEEEcccCCCcCCCCCEEEEEEeCCc-CC---cccc-CCCHHHHHHH
Confidence 1 1222110 112333455555556667788888877764321 11 0122 1257899999
Q ss_pred HHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCc-cccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCC
Q 038727 465 CFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGN-IFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGG 543 (565)
Q Consensus 465 ~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~-~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g 543 (565)
+++.|++++|... .+....+ ..|. .+. .|..... ......++ ..++ ++||||||+++ +|.|
T Consensus 393 ~~~~l~~~~~~~~-~p~~~~~---~~w~------~~~p~~~~g~~-~~~~~~~~-----~~~~-~~~l~~aG~~~-~g~g 454 (478)
T 2ivd_A 393 AREELKALAGVTA-RPSFTRV---FRWP------LGIPQYNLGHL-ERVAAIDA-----ALQR-LPGLHLIGNAY-KGVG 454 (478)
T ss_dssp HHHHHHHHHCCCS-CCSEEEE---EEES------SCCBCCBTTHH-HHHHHHHH-----HHHT-STTEEECSTTT-SCCS
T ss_pred HHHHHHHHhCCCC-CCcEEEE---EECC------CcccCCCcCHH-HHHHHHHH-----HHhh-CCCEEEEccCC-CCCC
Confidence 9999999998753 2222211 1121 111 1221110 00000111 1122 68999999998 6778
Q ss_pred ccCc--chHHHHHHHHHHhhhhc
Q 038727 544 VMGA--PGRNAAHVVLQDFKKQS 564 (565)
Q Consensus 544 ~~~a--sg~~aa~~i~~~~~~~~ 564 (565)
+++| ||+.||++|++.+++..
T Consensus 455 v~gA~~SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 455 LNDCIRNAAQLADALVAGNTSHA 477 (478)
T ss_dssp HHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHHHHHHHhhccCC
Confidence 9988 99999999998886643
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.98 E-value=4.8e-31 Score=274.16 Aligned_cols=431 Identities=20% Similarity=0.168 Sum_probs=247.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccccCc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKHGL 95 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~g~ 95 (565)
.++||+|||||++||+||++|+++|++|+|||+++++||++.+.. .+|+.+|.|++++....+ ++++++|+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~-- 80 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT-IDGAVLEIGGQWVSPDQTALISLLDELGLKTF-- 80 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE-ETTEEEECSCCCBCTTCHHHHHHHHHTTCCEE--
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc-cCCceeccCCeEecCccHHHHHHHHHcCCccc--
Confidence 357999999999999999999999999999999999999998876 479999999876543333 45666655321
Q ss_pred eeecCCCceeeec-CCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhh
Q 038727 96 KLLKPIATSFTPC-LDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLL 174 (565)
Q Consensus 96 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (565)
..........+ .++....+.... ..+.+.....+..+...+..+.. .+....+ +.
T Consensus 81 --~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~--- 136 (453)
T 2yg5_A 81 --ERYREGESVYISSAGERTRYTGDS-------FPTNETTKKEMDRLIDEMDDLAA---QIGAEEP---------WA--- 136 (453)
T ss_dssp --ECCCCSEEEEECTTSCEEEECSSS-------CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCG---------GG---
T ss_pred --ccccCCCEEEEeCCCceeeccCCC-------CCCChhhHHHHHHHHHHHHHHHh---hcCCCCC---------CC---
Confidence 11111111111 124333332110 00111111111111111111111 1100000 00
Q ss_pred hhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHHHhccC-CCCC-CChhHHHHHHHH
Q 038727 175 RDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSM-ASIH-APGSGYVLLHHV 252 (565)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~-~~~~-~~~~~~~~~~~~ 252 (565)
. .....+...++.+++.+.+.++.++.++.... .+.+ ..++ ..+..+.+....
T Consensus 137 ---------------------~---~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~ 191 (453)
T 2yg5_A 137 ---------------------H---PLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKPAHSFSALQAVLMAA 191 (453)
T ss_dssp ---------------------S---TTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSCTTSSBHHHHHHHHH
T ss_pred ---------------------C---cchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCCcccccHHHHHHHhc
Confidence 0 01122356788999999998888887765432 1111 1333 333333221111
Q ss_pred hc-cc----cCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCc-eeEEEeCCCcEEecCEEEECCC
Q 038727 253 MG-ET----DGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGE-VDGVLLVDGTRVHSSFVLSNAT 326 (565)
Q Consensus 253 ~~-~~----~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~-v~~V~~~~G~~~~ad~VI~a~~ 326 (565)
.. .. ......+.+++||++.++++|++.+ |++|++|++|++|..++ ++ +. |++ +|+++.||+||+|++
T Consensus 192 ~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~v~-v~~-~~~~~~ad~VI~a~p 265 (453)
T 2yg5_A 192 SAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEAL---GDDVFLNAPVRTVKWNE-SGATV-LAD-GDIRVEASRVILAVP 265 (453)
T ss_dssp HTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHH---GGGEECSCCEEEEEEET-TEEEE-EET-TTEEEEEEEEEECSC
T ss_pred cCCcHhhhccCCCcceEEEcCChHHHHHHHHHhc---CCcEEcCCceEEEEEeC-CceEE-EEE-CCeEEEcCEEEEcCC
Confidence 00 00 0000123479999999999997755 78999999999999887 76 55 766 677899999999999
Q ss_pred hHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhh
Q 038727 327 PYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAW 406 (565)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (565)
+.. +.+|+..+.+|+...+.++++.++ ++.++++.++++ .|. .. ...+.++. .
T Consensus 266 ~~~-~~~l~~~p~lp~~~~~~i~~~~~~-~~~kv~l~~~~~-~w~-------~~--~~~g~~~~-~-------------- 318 (453)
T 2yg5_A 266 PNL-YSRISYDPPLPRRQHQMHQHQSLG-LVIKVHAVYETP-FWR-------ED--GLSGTGFG-A-------------- 318 (453)
T ss_dssp GGG-GGGSEEESCCCHHHHHHGGGEEEC-CEEEEEEEESSC-GGG-------GG--TEEEEEEC-T--------------
T ss_pred HHH-HhcCEeCCCCCHHHHHHHhcCCCc-ceEEEEEEECCC-CCC-------CC--CCCceeec-C--------------
Confidence 987 477765566899888999999884 789999999875 231 11 11112221 1
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCCCCC-ccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEe
Q 038727 407 NGLPSRRPVMEMTIPSSLDKTISPPG-KHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDL 485 (565)
Q Consensus 407 ~g~~~~~~~~~~~~~~~~d~~~~p~G-~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~ 485 (565)
..+...+..+ + .|+| +.+++.++...... .|.. ..++++.+.+++.|++++|.-........+
T Consensus 319 -----~~~~~~~~~~-----~-~~~~~~~~l~~~~~~~~~~----~~~~-~~~~~~~~~~l~~L~~~~~~~~~~p~~~~~ 382 (453)
T 2yg5_A 319 -----SEVVQEVYDN-----T-NHEDDRGTLVAFVSDEKAD----AMFE-LSAEERKATILASLARYLGPKAEEPVVYYE 382 (453)
T ss_dssp -----TSSSCEEEEC-----C-CTTCSSEEEEEEEEHHHHH----HHHH-SCHHHHHHHHHHHHHHHHCGGGGCCSEEEE
T ss_pred -----CCCeEEEEeC-----C-CCCCCCCEEEEEeccHHHH----HHhc-CCHHHHHHHHHHHHHHHhCccCCCccEEEE
Confidence 1122122222 2 3444 45565554321110 1321 146888999999999998741111111111
Q ss_pred CChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCC---CCCCCccCc--chHHHHHHHHHHh
Q 038727 486 LTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGS---HPGGGVMGA--PGRNAAHVVLQDF 560 (565)
Q Consensus 486 ~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~---~~g~g~~~a--sg~~aa~~i~~~~ 560 (565)
.+|.+. ....|+..+. ..+.+....++ ..++|++||||||+++ ++| +++|| ||++||++|++++
T Consensus 383 ---~~W~~~-~~~~G~~~~~-~~~g~~~~~~~-----~~~~p~~~l~~aG~~~~~~~~g-~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 383 ---SDWGSE-EWTRGCYAAS-FDLGGLHRYGA-----DSRTPVGPIHFSCSDIAAEGYQ-HVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp ---CCTTTC-TTTCSSSCEE-ECTTHHHHHGG-----GTTCCBTTEEECCGGGCSTTTT-SHHHHHHHHHHHHHHHHHHC
T ss_pred ---eecCCC-CCCCCCCcCc-CCCCccccchH-----HHhCCcCceEEeeccccccccc-chHHHHHHHHHHHHHHHHHh
Confidence 123322 2234442111 11111111233 4678899999999997 344 68887 9999999999876
Q ss_pred h
Q 038727 561 K 561 (565)
Q Consensus 561 ~ 561 (565)
+
T Consensus 452 ~ 452 (453)
T 2yg5_A 452 K 452 (453)
T ss_dssp -
T ss_pred c
Confidence 4
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.98 E-value=1.2e-30 Score=274.04 Aligned_cols=427 Identities=16% Similarity=0.175 Sum_probs=246.0
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhhh---HhhhccccccCc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPS---VIRELELKKHGL 95 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~~---~~~~l~l~~~g~ 95 (565)
+++||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++....+. +++++|+.+. +
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~-~ 115 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNA-L 115 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTC-E
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcce-e
Confidence 448999999999999999999999999999999999999999977 6799999999876544554 4445555322 2
Q ss_pred eeec--CCCceeeecCC--CcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCC---CCCcCCCc
Q 038727 96 KLLK--PIATSFTPCLD--GLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPP---PEALHGDL 168 (565)
Q Consensus 96 ~~~~--~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 168 (565)
.... ........+.+ +....++ ..+. ...... .+..+..... ..... .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~~~~--------------~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~--~ 170 (495)
T 2vvm_A 116 SPSFNFSRGVNHFQLRTNPTTSTYMT--------------HEAE------DELLRS---ALHKFTNVDGTNGRTVLP--F 170 (495)
T ss_dssp EESCCCSSSCCEEEEESSTTCCEEEC--------------HHHH------HHHHHH---HHHHHHCSSSSTTTTTCS--C
T ss_pred ecccccCCCceEEEecCCCCceeecC--------------HHHH------HHHHHH---HHHHHHccchhhhhhcCC--C
Confidence 2211 01111111111 2222221 1000 000111 1111111000 00000 0
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHccc--CChHHHHHHHHHH--HhccCCCCCCChh
Q 038727 169 SFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWF--ESDVLKATVAADA--ITGSMASIHAPGS 244 (565)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~--~~g~~~~~~~~~~ 244 (565)
.+.. + ... .+..+...++.+++.+.. .++.++.++.... +.+ ..++..+.
T Consensus 171 ~~~~-~--------------------~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~ 224 (495)
T 2vvm_A 171 PHDM-F--------------------YVP---EFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSG--GTLENSSF 224 (495)
T ss_dssp TTST-T--------------------SST---THHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHS--SCTTTSBH
T ss_pred CCCc-c--------------------cCc---chhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcC--CCcchhhH
Confidence 0000 0 000 112335567888888765 5666665555332 222 23444443
Q ss_pred HHHHHHHHhccc-----cCCCccccccCCchHHHHHHHHHHHHHcC-cEEEeCcceeEEEecCCCceeEEEeCCCcEEec
Q 038727 245 GYVLLHHVMGET-----DGDRNLWSHVEGGMGSVSLAISKAATKAG-AHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHS 318 (565)
Q Consensus 245 ~~~~~~~~~~~~-----~~~~g~~~~~~gG~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~a 318 (565)
...+........ ....+.| ++.||++.++++|.+.+++.| ++|+++++|++|..++ +++. |++.+|+++.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~a 301 (495)
T 2vvm_A 225 GEFLHWWAMSGYTYQGCMDCLMSY-KFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-DAAR-VTARDGREFVA 301 (495)
T ss_dssp HHHHHHHHHTTSSHHHHHHHHHSE-EETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-SSEE-EEETTCCEEEE
T ss_pred HHHHHHHHHcCCCHHHHHhhhceE-EeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-CEEE-EEECCCCEEEc
Confidence 322221111000 0012345 789999999999999999998 9999999999999887 7765 88888888999
Q ss_pred CEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHH
Q 038727 319 SFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEI 398 (565)
Q Consensus 319 d~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (565)
|+||+|+++..+ .++...+.+|+...+.++++.+ .++.+|++.++++. |. ... .+.. .+
T Consensus 302 d~vI~a~~~~~l-~~i~~~p~lp~~~~~ai~~~~~-~~~~kv~l~~~~~~-~~-----------~~~-g~~~-~~----- 360 (495)
T 2vvm_A 302 KRVVCTIPLNVL-STIQFSPALSTERISAMQAGHV-SMCTKVHAEVDNKD-MR-----------SWT-GIAY-PF----- 360 (495)
T ss_dssp EEEEECCCGGGG-GGSEEESCCCHHHHHHHHHCCC-CCCEEEEEEESCGG-GG-----------GEE-EEEC-SS-----
T ss_pred CEEEECCCHHHH-hheeeCCCCCHHHHHHHHhcCC-CceeEEEEEECCcc-CC-----------Cce-eEec-CC-----
Confidence 999999999884 6675455689888999999987 47889999998742 21 011 1111 10
Q ss_pred HHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCC
Q 038727 399 GSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSS 478 (565)
Q Consensus 399 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~ 478 (565)
.+..++.. ....|.|..+++.++. . . . .+.+ ++..+.+++.|++++|+..
T Consensus 361 --------------~~~~~~~~-----~~~~~~~~~vl~~~~~-~-~--~--~~~~----~e~~~~~~~~L~~~~~~~~- 410 (495)
T 2vvm_A 361 --------------NKLCYAIG-----DGTTPAGNTHLVCFGN-S-A--N--HIQP----DEDVRETLKAVGQLAPGTF- 410 (495)
T ss_dssp --------------CSSCEEEE-----EEECTTSCEEEEEEEC-S-T--T--CCCT----TTCHHHHHHHHHTTSTTSC-
T ss_pred --------------CCcEEEec-----CCCCCCCCeEEEEEeC-c-c--c--cCCC----HHHHHHHHHHHHHhcCCCC-
Confidence 11111111 1123556666666532 1 1 1 1222 2345677888999998742
Q ss_pred cEeEEEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCC--CCCccCc--chHHHHH
Q 038727 479 SVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHP--GGGVMGA--PGRNAAH 554 (565)
Q Consensus 479 ~i~~~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~--g~g~~~a--sg~~aa~ 554 (565)
.+....+ ..|.+. ....|+.... .+.+....++ ..++|++||||||+++.+ .+.+.|| ||++||+
T Consensus 411 ~~~~~~~---~~W~~d-p~~~g~y~~~--~~g~~~~~~~-----~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~ 479 (495)
T 2vvm_A 411 GVKRLVF---HNWVKD-EFAKGAWFFS--RPGMVSECLQ-----GLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAAR 479 (495)
T ss_dssp CEEEEEE---CCTTTC-TTTSSSSCCC--CTTHHHHHHH-----HHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHH
T ss_pred CceEEEE---eEcCCC-CCCCCCccCc--CCCcchhhHH-----HHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHH
Confidence 2333222 234432 2223332111 1111100122 235678999999999853 2356677 9999999
Q ss_pred HHHHHhhhh
Q 038727 555 VVLQDFKKQ 563 (565)
Q Consensus 555 ~i~~~~~~~ 563 (565)
+|++.+++.
T Consensus 480 ~i~~~l~~~ 488 (495)
T 2vvm_A 480 VVLEELGTK 488 (495)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhccc
Confidence 999988643
No 8
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.97 E-value=6.8e-30 Score=264.17 Aligned_cols=393 Identities=11% Similarity=0.119 Sum_probs=237.2
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCC-ce-ec--------------cchhhhh----
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPG-FK-FS--------------RCSYLQS---- 78 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G-~~-~d--------------~g~~~~~---- 78 (565)
.++||||||||++||+||+.|+++|++|+|||+++++||+++++. .+| |. || .|.++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVT-LSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC-HHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccee-ccchhceeccCCccccCcchhcccccceeecccc
Confidence 568999999999999999999999999999999999999999865 333 32 33 3322210
Q ss_pred ------hhhhhHhhhccccccCceeecCCCceeeecCCCcEEEEcCC-hHHHHHHHhccchhhhhhhHHHHHHHHHHHHH
Q 038727 79 ------LLRPSVIRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFD-DQQNNSEISKFSKRDADTYPRYENELSKFCKI 151 (565)
Q Consensus 79 ------~~~~~~~~~l~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (565)
....++++++|+.++ +++.+.+..+. +.+|+.+.++.+ .+.....+..+. +...+.++...
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~-l~~~~~~~~~~--~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~------- 156 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRY-VDFKQVSGSYV--FKQGKIYKVPANEIEAISSPLMGIF--EKRRMKKFLEW------- 156 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGT-CCEEECCCEEE--EETTEEEECCSSHHHHHHCTTSCHH--HHHHHHHHHHH-------
T ss_pred ceeecCcHHHHHHHhcCCccc-eEEEEccceeE--EeCCeEEECCCChHHHHhhhccchh--hHHHHHHHHHH-------
Confidence 011257788888766 77777664333 347777777766 333322222111 22222222222
Q ss_pred HHHhhcCCCCCCcCCCchhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHH
Q 038727 152 MDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA 231 (565)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~ 231 (565)
+.......+ .. + . .+ +....++.+++++++.++.++.++....
T Consensus 157 ~~~~~~~~p-~~------~-~----------------------------~~-~~~~~s~~~~l~~~~~~~~l~~~l~~~~ 199 (453)
T 2bcg_G 157 ISSYKEDDL-ST------H-Q----------------------------GL-DLDKNTMDEVYYKFGLGNSTKEFIGHAM 199 (453)
T ss_dssp HHHCBTTBG-GG------S-T----------------------------TC-CTTTSBHHHHHHHTTCCHHHHHHHHHHT
T ss_pred HHHhccCCc-hh------h-h----------------------------cc-ccccCCHHHHHHHhCCCHHHHHHHHHHH
Confidence 211111100 00 0 0 00 0145678888899999999988876432
Q ss_pred HhccC-CCCCCChhHHHH---HHHHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEec--CCCce
Q 038727 232 ITGSM-ASIHAPGSGYVL---LHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIG--DSGEV 305 (565)
Q Consensus 232 ~~g~~-~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--~~~~v 305 (565)
..... .....+. ...+ ..+......+..+.|.+|+||++.++++|++.+++.|++|+++++|++|..+ + +++
T Consensus 200 ~l~~~~~~~~~p~-~~~~~~~~~~~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~~~ 277 (453)
T 2bcg_G 200 ALWTNDDYLQQPA-RPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-GKF 277 (453)
T ss_dssp SCCSSSGGGGSBH-HHHHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-TEE
T ss_pred HhccCccccCCch-HHHHHHHHHHHHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-CeE
Confidence 21110 0001122 1111 2221111112246677999999999999999999999999999999999988 7 888
Q ss_pred eEEEeCCCcEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcC-CCCceEEEEEecCCCCccccccCCCcCCCCcc
Q 038727 306 DGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSD-YHSGVTKINVAVDKLPQFHCCKSSQLEVGPHH 384 (565)
Q Consensus 306 ~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 384 (565)
++|++. |+++.||+||+|++++. .++ .+.. ++.+++++ ++++.... ....++
T Consensus 278 ~~V~~~-g~~~~ad~VV~a~~~~~--~~l--------------~~~~~~~~~~~~i---~~~~~~~~-------~~~~~~ 330 (453)
T 2bcg_G 278 EGVKTK-LGTFKAPLVIADPTYFP--EKC--------------KSTGQRVIRAICI---LNHPVPNT-------SNADSL 330 (453)
T ss_dssp EEEEET-TEEEECSCEEECGGGCG--GGE--------------EEEEEEEEEEEEE---ESSCCTTS-------TTCSSE
T ss_pred EEEEEC-CeEEECCEEEECCCccc--hhh--------------cccCCcceeEEEE---EccccCCC-------CCCccE
Confidence 888874 77899999999998874 222 1222 34555655 55542110 011122
Q ss_pred ccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHH
Q 038727 385 TATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQK 464 (565)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 464 (565)
++.++. ++++..+++++++++..| +++|+|+++++++++ .|. .+ .+++ .+
T Consensus 331 --~ii~~~---------------~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~-~~~-------~~--~~~~-l~- 380 (453)
T 2bcg_G 331 --QIIIPQ---------------SQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTI-IET-------DK--PHIE-LE- 380 (453)
T ss_dssp --EEEECG---------------GGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEE-CCS-------SC--HHHH-TH-
T ss_pred --EEEeCc---------------cccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEe-cCC-------CC--HHHH-HH-
Confidence 555532 134567899999999988 899999999988864 222 11 1233 22
Q ss_pred HHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCc
Q 038727 465 CFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGV 544 (565)
Q Consensus 465 ~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~ 544 (565)
..++++.|.....+...+ . ..|. . ...-+|+|+||+.- ....+
T Consensus 381 --~~~~~l~~~~~~~~~~~~-----------------~------------~~~~----~-~~~~~~~~~~~~~~-~~~~~ 423 (453)
T 2bcg_G 381 --PAFKLLGPIEEKFMGIAE-----------------L------------FEPR----E-DGSKDNIYLSRSYD-ASSHF 423 (453)
T ss_dssp --HHHGGGCSCSEEEEEEEE-----------------E------------EEES----S-CSTTTSEEECCCCC-SCSBS
T ss_pred --HHHHHhhhHHHhhccchh-----------------e------------eeec----C-CCCCCCEEECCCCC-ccccH
Confidence 444445564332221111 1 1121 1 12248999999875 23456
Q ss_pred cCc--chHHHHHHHH
Q 038727 545 MGA--PGRNAAHVVL 557 (565)
Q Consensus 545 ~~a--sg~~aa~~i~ 557 (565)
.++ +++.++++|+
T Consensus 424 ~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 424 ESMTDDVKDIYFRVT 438 (453)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666 8999999998
No 9
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.97 E-value=1.7e-30 Score=273.74 Aligned_cols=433 Identities=16% Similarity=0.125 Sum_probs=241.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccccCc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKHGL 95 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~g~ 95 (565)
+++||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++....+ ++++++|+... +
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~-~ 89 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREK-Q 89 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG-E
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCccc-c
Confidence 458999999999999999999999999999999999999998876 679999999987643333 57788887654 3
Q ss_pred eeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhhh
Q 038727 96 KLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLLR 175 (565)
Q Consensus 96 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (565)
.+.. .......+.+|+.+.++.+....... .+.. +. ..++... ..+........
T Consensus 90 ~~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~--~~~~-----~~---~~~~~~~---~~~~~~~~~~~------------ 143 (504)
T 1sez_A 90 QFPL-SQNKRYIARNGTPVLLPSNPIDLIKS--NFLS-----TG---SKLQMLL---EPILWKNKKLS------------ 143 (504)
T ss_dssp ECCS-SCCCEEEESSSSEEECCSSHHHHHHS--SSSC-----HH---HHHHHHT---HHHHC------------------
T ss_pred eecc-CCCceEEEECCeEEECCCCHHHHhcc--ccCC-----HH---HHHHHhH---hhhccCccccc------------
Confidence 3322 12223344567766665543221110 0000 00 0000000 11110000000
Q ss_pred hhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH--HHhccCCCCCCChhHHH--HHH-
Q 038727 176 DKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD--AITGSMASIHAPGSGYV--LLH- 250 (565)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~g~~~~~~~~~~~~~--~~~- 250 (565)
. ......++.+++.+.+.++.++.++... .+++. .++..+.... .+.
T Consensus 144 -------------------------~-~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~ 195 (504)
T 1sez_A 144 -------------------------Q-VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGG--DPDSLSMHHSFPELWN 195 (504)
T ss_dssp ------------------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSC--CGGGSBHHHHCHHHHH
T ss_pred -------------------------c-cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCC--ChHHhhHHHHhHHHHH
Confidence 0 0001245555555555444444433321 12221 2222211110 000
Q ss_pred --------------HHhccc--------------cCCCccccccCCchHHHHHHHHHHHHHcC-cEEEeCcceeEEEecC
Q 038727 251 --------------HVMGET--------------DGDRNLWSHVEGGMGSVSLAISKAATKAG-AHILVNTEVSQIMIGD 301 (565)
Q Consensus 251 --------------~~~~~~--------------~~~~g~~~~~~gG~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~ 301 (565)
..+... ....+.+ +++||++.|+++|++.+ + ++|++|++|++|..++
T Consensus 196 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~GG~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~ 271 (504)
T 1sez_A 196 LEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF-SFLGGMQTLTDAICKDL---REDELRLNSRVLELSCSC 271 (504)
T ss_dssp HHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB-EETTCTHHHHHHHHTTS---CTTTEETTCCEEEEEEEC
T ss_pred HHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE-eeCcHHHHHHHHHHhhc---ccceEEcCCeEEEEEecC
Confidence 000000 0112344 88999999999997654 4 7899999999999877
Q ss_pred CCce-----eEEEeC--CC---cEEecCEEEECCChHHHHhhcCCC---CCCCHHHHHHHhhcCCCCceEEEEEecCCCC
Q 038727 302 SGEV-----DGVLLV--DG---TRVHSSFVLSNATPYKTFMGLVPR---DVLPDDFLRAIKYSDYHSGVTKINVAVDKLP 368 (565)
Q Consensus 302 ~~~v-----~~V~~~--~G---~~~~ad~VI~a~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 368 (565)
++. ..|++. +| +++.||+||+|+++..+ .+++.+ .++++.. ++++.+ .++.+|++.++.+.
T Consensus 272 -~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l-~~ll~~~~~~~~~~~~---l~~~~~-~~~~~v~l~~~~~~ 345 (504)
T 1sez_A 272 -TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDV-KSMKIAKRGNPFLLNF---IPEVDY-VPLSVVITTFKREN 345 (504)
T ss_dssp -SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHH-HTSEEESSSSBCCCTT---SCCCCE-EEEEEEEEEEEGGG
T ss_pred -CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHH-HHHhhcccCCcccHHH---HhcCCC-CceEEEEEEEchhh
Confidence 551 336654 45 57899999999999985 677631 2244322 566666 47899999998753
Q ss_pred ccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCC
Q 038727 369 QFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPS 448 (565)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~ 448 (565)
|. .. .... .++++.. +. .+| .+...+.+++..+|..+|+|+.++++++.....
T Consensus 346 -~~-------~~-~~~~-~~l~~~~--~~--------~~g----~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~--- 398 (504)
T 1sez_A 346 -VK-------YP-LEGF-GVLVPSK--EQ--------QHG----LKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRN--- 398 (504)
T ss_dssp -BS-------SC-CCSS-EEECCGG--GG--------GGT----CCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTC---
T ss_pred -cC-------CC-CCce-EEEcCCC--CC--------CCC----CccceEEeeccccCCcCCCCCEEEEEEeCCCCc---
Confidence 31 11 1121 3444211 00 011 112233344455677778888877776532211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCC
Q 038727 449 DGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPV 528 (565)
Q Consensus 449 ~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i 528 (565)
..|.. ..++++.+.+++.|++++|.- ..++...+ ..|.+-. +...+.+. ...... + ...+++
T Consensus 399 -~~~~~-~~~ee~~~~v~~~L~~~~g~~-~~p~~~~~---~~w~~~~--p~~~~g~~-~~~~~~---~------~~~~~~ 460 (504)
T 1sez_A 399 -RELAK-ASRTELKEIVTSDLKQLLGAE-GEPTYVNH---LYWSKAF--PLYGHNYD-SVLDAI---D------KMEKNL 460 (504)
T ss_dssp -GGGTT-CCHHHHHHHHHHHHHHHHCBC-SCCSSEEE---EEEEEEE--ECCCTTHH-HHHHHH---H------HHHHHS
T ss_pred -ccccC-CCHHHHHHHHHHHHHHHhCCC-CCCeEEEE---eECCCCC--CccCcCHH-HHHHHH---H------HHHHhC
Confidence 11222 256899999999999998752 22222211 1122111 11111100 000000 0 224568
Q ss_pred CCeEEcCCCCCCCCCccCc--chHHHHHHHHHHhhhh
Q 038727 529 RGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDFKKQ 563 (565)
Q Consensus 529 ~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~~~~ 563 (565)
+||||||+++. |.|+.+| ||++||++|++++.+.
T Consensus 461 ~~l~~aG~~~~-g~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 461 PGLFYAGNHRG-GLSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp TTEEECCSSSS-CSSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeecCC-CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999985 6788887 9999999999988654
No 10
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.96 E-value=1.4e-29 Score=264.62 Aligned_cols=428 Identities=14% Similarity=0.157 Sum_probs=232.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCC------CcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhcc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGG------LSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELE 89 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G------~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~ 89 (565)
+++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. ..|+.+|.|++.+....+ ++++++|
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lg 82 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLG 82 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcC
Confidence 3589999999999999999999999 99999999999999998876 579999999976544344 5777887
Q ss_pred ccccCceeecCCCceeeecCCCcEEEEcCChHH-HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCc
Q 038727 90 LKKHGLKLLKPIATSFTPCLDGLYLLLGFDDQQ-NNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDL 168 (565)
Q Consensus 90 l~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (565)
+... +. .........+.++....++.+... ....+..+.. ............. ...+ .... ...
T Consensus 83 l~~~-~~--~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~---~~~~-~~~~--~~~--- 147 (470)
T 3i6d_A 83 LEHL-LV--NNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVS---TGLFSLSGKARAA---MDFI-LPAS--KTK--- 147 (470)
T ss_dssp CCTT-EE--ECCCCCEEEECSSCEEECCC------------------------CCSHHHH---HHHH-SCCC--SSS---
T ss_pred Ccce-ee--cCCCCccEEEECCEEEECCCCcccCCcCchHHhhc---cCcCCHHHHHHHh---cCcc-cCCC--CCC---
Confidence 7643 22 111111122334544443322100 0000000000 0000000000000 1111 1000 000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHH--HhccCCCCCCChhHH
Q 038727 169 SFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA--ITGSMASIHAPGSGY 246 (565)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~g~~~~~~~~~~~~ 246 (565)
...++.+++.+.+..+....++.... .++. .+.......
T Consensus 148 -------------------------------------~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~ 188 (470)
T 3i6d_A 148 -------------------------------------DDQSLGEFFRRRVGDEVVENLIEPLLSGIYAG--DIDKLSLMS 188 (470)
T ss_dssp -------------------------------------SCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCS--CTTTBBHHH
T ss_pred -------------------------------------CCcCHHHHHHHhcCHHHHHHhccchhcEEecC--CHHHhhHHH
Confidence 11233333333333222222222110 1110 111111000
Q ss_pred H-------------HHHHHhcc---------ccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCc
Q 038727 247 V-------------LLHHVMGE---------TDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGE 304 (565)
Q Consensus 247 ~-------------~~~~~~~~---------~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~ 304 (565)
. +....... .....+.+.+++||++.++++|++.+.+ ++|+++++|++|..++ ++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~ 265 (470)
T 3i6d_A 189 TFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SC 265 (470)
T ss_dssp HCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECS-SS
T ss_pred HHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcC-Ce
Confidence 0 00000000 0001223457899999999999877654 7999999999999987 77
Q ss_pred eeEEEeCCCcEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCcc
Q 038727 305 VDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHH 384 (565)
Q Consensus 305 v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 384 (565)
+. |++.+|+++.||+||+|+++..+ .+++.+++ ..+.++++.+ .++.++++.++++. |. .. ...
T Consensus 266 ~~-v~~~~g~~~~ad~vi~a~p~~~~-~~l~~~~~----~~~~~~~~~~-~~~~~v~l~~~~~~-~~-------~~-~~~ 329 (470)
T 3i6d_A 266 YS-LELDNGVTLDADSVIVTAPHKAA-AGMLSELP----AISHLKNMHS-TSVANVALGFPEGS-VQ-------ME-HEG 329 (470)
T ss_dssp EE-EEESSSCEEEESEEEECSCHHHH-HHHTTTST----THHHHHTCEE-EEEEEEEEEESSTT-CC-------CS-SCS
T ss_pred EE-EEECCCCEEECCEEEECCCHHHH-HHHcCCch----hhHHHhcCCC-CceEEEEEEECchh-cC-------CC-CCC
Confidence 65 88999988999999999999885 67876532 2567888887 58999999998863 31 11 111
Q ss_pred ccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHH
Q 038727 385 TATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQK 464 (565)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 464 (565)
.+.+ ++.+ ...+...++..+...+...|+|..++++++. .++. ..+.. ...+++.+.
T Consensus 330 ~g~l-~~~~-----------------~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~-~~~~---~~~~~-~~~~~~~~~ 386 (470)
T 3i6d_A 330 TGFV-ISRN-----------------SDFAITACTWTNKKWPHAAPEGKTLLRAYVG-KAGD---ESIVD-LSDNDIINI 386 (470)
T ss_dssp SEEE-ECST-----------------TCCSEEEEEEHHHHCGGGSCTTCEEEEEEEC-CSSC---CGGGT-SCHHHHHHH
T ss_pred eEEE-ccCC-----------------CCCCceEEEEEcCcCCCcCCCCCEEEEEEEC-CCCC---ccccC-CCHHHHHHH
Confidence 2222 2111 1122333444444445567888777777642 2221 11111 246899999
Q ss_pred HHHHHHHhCCCCCCcEeEEEeCChhhHHHHc-CCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCC
Q 038727 465 CFSLIDEYAPGFSSSVIGYDLLTPPDLEREF-GLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGG 543 (565)
Q Consensus 465 ~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~-~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g 543 (565)
+++.|++++|... .++...+. .|..-. ....|.. .+....++ ..+++++|||+||+++. |.|
T Consensus 387 ~~~~l~~~~g~~~-~p~~~~~~---~w~~a~p~~~~g~~-------~~~~~~~~-----~l~~~~~~l~~aG~~~~-g~g 449 (470)
T 3i6d_A 387 VLEDLKKVMNING-EPEMTCVT---RWHESMPQYHVGHK-------QRIKELRE-----ALASAYPGVYMTGASFE-GVG 449 (470)
T ss_dssp HHHHHGGGSCCCS-CCSEEEEE---EEEEEEEECBTTHH-------HHHHHHHH-----HHHHHSTTEEECSTTTS-CCS
T ss_pred HHHHHHHHhCCCC-CceEEEEE---EcCCccCCCCCCHH-------HHHHHHHH-----HHHhhCCCEEEEeecCC-CCC
Confidence 9999999997542 33322221 122110 0111100 00000111 12345789999999974 678
Q ss_pred ccCc--chHHHHHHHHHHh
Q 038727 544 VMGA--PGRNAAHVVLQDF 560 (565)
Q Consensus 544 ~~~a--sg~~aa~~i~~~~ 560 (565)
+++| ||+.||++|++++
T Consensus 450 v~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 450 IPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8887 9999999999886
No 11
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=263.17 Aligned_cols=243 Identities=16% Similarity=0.088 Sum_probs=152.3
Q ss_pred ccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCCCCCCCHHH
Q 038727 265 HVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDF 344 (565)
Q Consensus 265 ~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~ 344 (565)
+++||++.++++|++.+++.|++|+++++|++|..++ +++..|.+.+ .++.||+||+|++++.+ .+|+++ .++..
T Consensus 228 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~~~~v~~~~-~~~~ad~vv~a~p~~~~-~~ll~~--~~~~~ 302 (477)
T 3nks_A 228 SLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQA-EGRWKVSLRD-SSLEADHVISAIPASVL-SELLPA--EAAPL 302 (477)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECG-GGCEEEECSS-CEEEESEEEECSCHHHH-HHHSCG--GGHHH
T ss_pred EECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-CceEEEEECC-eEEEcCEEEECCCHHHH-HHhccc--cCHHH
Confidence 8899999999999999999999999999999999887 6644576654 46999999999999885 788865 45678
Q ss_pred HHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCC
Q 038727 345 LRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSL 424 (565)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 424 (565)
.+.++++.+ .++.++++.++++. |. ....+.+.. .. ...+.+.+.+.+..
T Consensus 303 ~~~l~~~~~-~~~~~v~l~~~~~~-~~----------~~~~g~l~~-~~-----------------~~~~~~~~~~~s~~ 352 (477)
T 3nks_A 303 ARALSAITA-VSVAVVNLQYQGAH-LP----------VQGFGHLVP-SS-----------------EDPGVLGIVYDSVA 352 (477)
T ss_dssp HHHHHTCCE-EEEEEEEEEETTCC-CS----------SCSSEEECC-TT-----------------TCSSEEEEECHHHH
T ss_pred HHHHhcCCC-CcEEEEEEEECCCC-CC----------CCCceEEcc-CC-----------------CCCCceEEEEeccc
Confidence 888999888 47889999998752 21 111122221 10 12234444554444
Q ss_pred CCCCC-CCCccEEEEEcccccCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCcc
Q 038727 425 DKTIS-PPGKHVVSLFTQYTPYK-PSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNI 502 (565)
Q Consensus 425 d~~~~-p~G~~~v~~~~~~~~~~-~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~~ 502 (565)
.|... |+|..++++++....+. ..+..|. ..++++.+.+++.|+++++. ...+....+. .|.+ ..+...+
T Consensus 353 ~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~--~~~~~~~~~~~~~L~~~~g~-~~~~~~~~v~---rw~~--a~p~~~~ 424 (477)
T 3nks_A 353 FPEQDGSPPGLRVTVMLGGSWLQTLEASGCV--LSQELFQQRAQEAAATQLGL-KEMPSHCLVH---LHKN--CIPQYTL 424 (477)
T ss_dssp CGGGSTTTTCEEEEEEECHHHHHHHHHSSCC--CCHHHHHHHHHHHHHHHHCC-CSCCSEEEEE---EEEE--EEECCBT
T ss_pred cCCCCCCCCceEEEEEECCccccccccccCC--CCHHHHHHHHHHHHHHHhCC-CCCCcEEEEE---EcCC--ccCCCCC
Confidence 44322 44777777764311110 0000121 14689999999999998743 3333332221 1221 1111111
Q ss_pred ccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHh
Q 038727 503 FHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDF 560 (565)
Q Consensus 503 ~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~ 560 (565)
.+. ...... +. ......+|||+||+|. .|.|+++| ||+.||++|+++.
T Consensus 425 g~~-~~~~~~---~~-----~l~~~~~~l~l~G~~~-~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 425 GHW-QKLESA---RQ-----FLTAHRLPLTLAGASY-EGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp THH-HHHHHH---HH-----HHHHTTCSEEECSTTT-SCCSHHHHHHHHHHHHHHHHHCC
T ss_pred CHH-HHHHHH---HH-----HHHhcCCCEEEEccCC-CCCcHHHHHHHHHHHHHHHHhcc
Confidence 000 000000 00 0011236899999996 78899987 9999999999864
No 12
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.96 E-value=2.5e-29 Score=263.71 Aligned_cols=248 Identities=14% Similarity=0.144 Sum_probs=163.4
Q ss_pred cccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC---cEEecCEEEECCChHHHHhhcCCCC
Q 038727 262 LWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG---TRVHSSFVLSNATPYKTFMGLVPRD 338 (565)
Q Consensus 262 ~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G---~~~~ad~VI~a~~~~~~~~~l~~~~ 338 (565)
.+.+++||++.|+++|++.+.+ ++|++|++|++|..++ +++. |++.+| +++.||+||+|+++.. +..|..
T Consensus 230 ~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~-l~~l~~-- 302 (489)
T 2jae_A 230 MMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVS-EGVT-VEYTAGGSKKSITADYAICTIPPHL-VGRLQN-- 302 (489)
T ss_dssp SEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECSCHHH-HTTSEE--
T ss_pred cEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcC-CeEE-EEEecCCeEEEEECCEEEECCCHHH-HHhCcc--
Confidence 3448999999999999887743 7899999999999888 7776 777776 5799999999999887 467765
Q ss_pred CCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEE
Q 038727 339 VLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEM 418 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 418 (565)
.+|+...+.++++.|+ ++++|++.++++. |. .. ....+.+.. ++.+...+
T Consensus 303 ~l~~~~~~~l~~~~~~-~~~kv~l~~~~~~-w~-------~~-~~~~g~~~~--------------------~~~~~~~~ 352 (489)
T 2jae_A 303 NLPGDVLTALKAAKPS-SSGKLGIEYSRRW-WE-------TE-DRIYGGASN--------------------TDKDISQI 352 (489)
T ss_dssp CCCHHHHHHHHTEECC-CEEEEEEEESSCH-HH-------HT-TCCCSCEEE--------------------ESSTTCEE
T ss_pred CCCHHHHHHHHhCCCc-cceEEEEEeCCCC-cc-------CC-CCccccccc--------------------CCCCceEE
Confidence 4888889999999985 8899999998752 31 10 011111222 12244456
Q ss_pred EcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC-CCCcEeEEEeCChhhHHHHcCC
Q 038727 419 TIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPG-FSSSVIGYDLLTPPDLEREFGL 497 (565)
Q Consensus 419 ~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~-~~~~i~~~~~~tp~t~~~~~~~ 497 (565)
..++..++ .|+ ..++..++...... .|.. ..++++.+.+++.|++++|. ++++++... +.+|.+. ..
T Consensus 353 ~~~s~~~~--~~~-~~l~~~~~~g~~~~----~~~~-~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~---~~~W~~~-~~ 420 (489)
T 2jae_A 353 MFPYDHYN--SDR-GVVVAYYSSGKRQE----AFES-LTHRQRLAKAIAEGSEIHGEKYTRDISSSF---SGSWRRT-KY 420 (489)
T ss_dssp ECCSSSTT--SSC-EEEEEEEEETHHHH----HHHT-SCHHHHHHHHHHHHHHHHCGGGGSSEEEEE---EEEGGGS-TT
T ss_pred EeCCCCCC--CCC-CEEEEEeeCCchhh----hhhc-CCHHHHHHHHHHHHHHHcCcchhhhccccE---EEEcCCC-CC
Confidence 66665442 232 23332343211110 1322 14688999999999999998 777666543 3457665 33
Q ss_pred CCCccccccC----CccccccCCCCCCCCCCCCCCCCeEEcCCCC-CCCCCccCc--chHHHHHHHHHHhhhh
Q 038727 498 TGGNIFHGAM----GLDSLFLMRPVKGWSGYRTPVRGLYLCGSGS-HPGGGVMGA--PGRNAAHVVLQDFKKQ 563 (565)
Q Consensus 498 ~~G~~~g~~~----~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~-~~g~g~~~a--sg~~aa~~i~~~~~~~ 563 (565)
..|++..... .+.+....++ ..++|++||||||+++ ++++++++| ||++||++|++.+..+
T Consensus 421 ~~G~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 421 SESAWANWAGSGGSHGGAATPEYE-----KLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp TSCSSCEETTC-------CCHHHH-----HHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCcchhcccccCCCcccchhhHH-----HHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444322210 0111111122 2356789999999987 567889998 9999999999987643
No 13
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.96 E-value=3.1e-28 Score=253.95 Aligned_cols=246 Identities=17% Similarity=0.163 Sum_probs=160.7
Q ss_pred cCCchHHHHHHHHHHHHHc--------CcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC-
Q 038727 266 VEGGMGSVSLAISKAATKA--------GAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP- 336 (565)
Q Consensus 266 ~~gG~~~l~~~l~~~l~~~--------G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~- 336 (565)
+.||++.++++|++.+.+. |++|+++++|++|..++ +++. |++.+|+++.||+||+|+++..+ ..++.
T Consensus 201 ~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vI~a~~~~~l-~~~~~~ 277 (472)
T 1b37_A 201 DQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP-GGVT-VKTEDNSVYSADYVMVSASLGVL-QSDLIQ 277 (472)
T ss_dssp CTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS-SCEE-EEETTSCEEEESEEEECSCHHHH-HTTSSE
T ss_pred cCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC-CcEE-EEECCCCEEEcCEEEEecCHHHh-ccCCee
Confidence 4799999999999888765 68999999999999988 7777 89999988999999999999885 55432
Q ss_pred -CCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCe
Q 038727 337 -RDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPV 415 (565)
Q Consensus 337 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 415 (565)
.+.+|+...++++++.+. +..+|++.++++ .|. .. +.. +.+...+.. .+ ...
T Consensus 278 ~~p~Lp~~~~~ai~~~~~~-~~~kv~l~~~~~-~w~-------~~-~~~-~~~~~~~~~------------~~----~~~ 330 (472)
T 1b37_A 278 FKPKLPTWKVRAIYQFDMA-VYTKIFLKFPRK-FWP-------EG-KGR-EFFLYASSR------------RG----YYG 330 (472)
T ss_dssp EESCCCHHHHHHHHHSEEE-CEEEEEEECSSC-CSC-------CS-TTC-SEEEECCSS------------TT----SSC
T ss_pred ECCCCCHHHHHHHHhcCCc-ceeEEEEECCCc-CCC-------CC-CCc-ceEEecccC------------Cc----cce
Confidence 456899889999999874 788999999885 232 11 111 122221110 00 112
Q ss_pred EEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC-CcEeEEEeCChhhHHHH
Q 038727 416 MEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS-SSVIGYDLLTPPDLERE 494 (565)
Q Consensus 416 ~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~t~~~~ 494 (565)
++... |+. .| |..++++++...... .|+. ..++++.+.+++.|++++|+.. ...+...+.+ |..+
T Consensus 331 ~~~~~----~~~-~p-~~~~l~~~~~~~~a~----~~~~-~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~---W~~~ 396 (472)
T 1b37_A 331 VWQEF----EKQ-YP-DANVLLVTVTDEESR----RIEQ-QSDEQTKAEIMQVLRKMFPGKDVPDATDILVPR---WWSD 396 (472)
T ss_dssp EEEEC----TTT-ST-TCCEEEEEEEHHHHH----HHHT-SCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCC---TTTC
T ss_pred eeecc----cCC-CC-CCCEEEEEechHHHH----HHHh-CCHHHHHHHHHHHHHHHcCCCCCCCCceEEecc---cCCC
Confidence 23222 332 23 456666553211100 1221 1478999999999999999863 2233333433 4332
Q ss_pred cCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCC--CCCccCc--chHHHHHHHHHHhhhh
Q 038727 495 FGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHP--GGGVMGA--PGRNAAHVVLQDFKKQ 563 (565)
Q Consensus 495 ~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~--g~g~~~a--sg~~aa~~i~~~~~~~ 563 (565)
....|++.... +.+....++ ..++|++||||||+++++ ++++.|| ||++||++|++.+++.
T Consensus 397 -~~~~G~~~~~~--~g~~~~~~~-----~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 397 -RFYKGTFSNWP--VGVNRYEYD-----QLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp -TTTSSSEEECB--TTCCHHHHH-----HHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCCCcccCCCC--CCCChhHHH-----HHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 33345432211 111100122 456889999999999976 4577888 9999999999988654
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.95 E-value=5.5e-28 Score=255.32 Aligned_cols=287 Identities=20% Similarity=0.222 Sum_probs=160.5
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccc
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKK 92 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~ 92 (565)
.++++||||||||++||+||++|+++ |++|+|||+++++||+++|....+||.||.|++++....+ +++++++...
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKE 86 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCcc
Confidence 34568999999999999999999985 9999999999999999998655789999999988755555 3555554332
Q ss_pred cCceeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHH-HHHhhcCCCCCCcCCCchhh
Q 038727 93 HGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKI-MDFLLDSPPPEALHGDLSFH 171 (565)
Q Consensus 93 ~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (565)
.++...++..++. .+|+.+.++.. ..+..+..... ......+... .........+ .++.
T Consensus 87 --~~~~~~~~~~~i~-~~g~~~~~p~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~s~~ 146 (513)
T 4gde_A 87 --DDWYTHQRISYVR-CQGQWVPYPFQ-----NNISMLPKEEQ------VKCIDGMIDAALEARVANTKP------KTFD 146 (513)
T ss_dssp --GGEEEEECCEEEE-ETTEEEESSGG-----GGGGGSCHHHH------HHHHHHHHHHHHHHHTCCSCC------CSHH
T ss_pred --ceeEEecCceEEE-ECCeEeecchh-----hhhhhcchhhH------HHHHHHHHHHHHhhhcccccc------cCHH
Confidence 2233333333322 35655544321 01111111110 0111111111 1111111110 1111
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH------HHhccCCCCCCChhH
Q 038727 172 DLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD------AITGSMASIHAPGSG 245 (565)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~------~~~g~~~~~~~~~~~ 245 (565)
+.+...+ .+.+.+.+..+.....+... ..... ........
T Consensus 147 ~~~~~~~--------------------------------g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~--~~~~~~~~ 192 (513)
T 4gde_A 147 EWIVRMM--------------------------------GTGIADLFMRPYNFKVWAVPTTKMQCAWLGE--RVAAPNLK 192 (513)
T ss_dssp HHHHHHH--------------------------------HHHHHHHTHHHHHHHHHSSCGGGBCSGGGCS--SCCCCCHH
T ss_pred HHHHHhh--------------------------------hhhhhhhhcchhhhhhccCChHHhhHHHHHH--hhcccchh
Confidence 1111000 00000000001011110000 00000 00001111
Q ss_pred HHHHHHHhccc---c-CCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEE
Q 038727 246 YVLLHHVMGET---D-GDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFV 321 (565)
Q Consensus 246 ~~~~~~~~~~~---~-~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~V 321 (565)
........... . .....+..++||++.++++|++.+++.|++|++|++|++|..++ ++ |++.+|+++.||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~v 268 (513)
T 4gde_A 193 AVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANN-KT---VTLQDGTTIGYKKL 268 (513)
T ss_dssp HHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTT-TE---EEETTSCEEEEEEE
T ss_pred hhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccC-CE---EEEcCCCEEECCEE
Confidence 11111111110 0 11112224589999999999999999999999999999999887 54 56889999999999
Q ss_pred EECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCC
Q 038727 322 LSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKL 367 (565)
Q Consensus 322 I~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 367 (565)
|+|+|...+ .+++.+ .........+.| .++.+|+++++..
T Consensus 269 I~t~P~~~l-~~~l~~----~~~~~~~~~l~y-~~~~~v~l~~~~~ 308 (513)
T 4gde_A 269 VSTMAVDFL-AEAMND----QELVGLTKQLFY-SSTHVIGVGVRGS 308 (513)
T ss_dssp EECSCHHHH-HHHTTC----HHHHHHHTTCCE-EEEEEEEEEEESS
T ss_pred EECCCHHHH-HHhcCc----hhhHhhhhcccC-CceEEEEEEEecc
Confidence 999998885 677753 445667777887 5888888888764
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.95 E-value=2.3e-27 Score=247.82 Aligned_cols=240 Identities=14% Similarity=0.136 Sum_probs=151.7
Q ss_pred ccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCCCCCC
Q 038727 261 NLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVL 340 (565)
Q Consensus 261 g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~ 340 (565)
+.+.+++||++.++++|++.+.+ ++|+++++|++|..++ +++. |++.+| ++.||+||+|++++.+ .+|+++.++
T Consensus 226 ~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~~-v~~~~g-~~~ad~vV~a~p~~~~-~~ll~~~~~ 299 (475)
T 3lov_A 226 GQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRED-GRYR-LKTDHG-PEYADYVLLTIPHPQV-VQLLPDAHL 299 (475)
T ss_dssp CSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEET-TEEE-EECTTC-CEEESEEEECSCHHHH-HHHCTTSCC
T ss_pred CcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeC-CEEE-EEECCC-eEECCEEEECCCHHHH-HHHcCccCH
Confidence 34558999999999999887754 7999999999999887 7765 888889 6999999999999985 788876433
Q ss_pred CHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEc
Q 038727 341 PDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTI 420 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 420 (565)
+.++++.+ .++.++++.++++. .. + ....+.+.. .+ .......++.
T Consensus 300 -----~~~~~~~~-~~~~~v~l~~~~~~-~~--------~-~~g~g~l~~-~~-----------------~~~~~~~~~~ 345 (475)
T 3lov_A 300 -----PELEQLTT-HSTATVTMIFDQQQ-SL--------P-IEGTGFVVN-RR-----------------APYSITACTA 345 (475)
T ss_dssp -----HHHHTCCE-EEEEEEEEEEECCS-SC--------S-SSSSEEEEC-TT-----------------SSCSEEEEEE
T ss_pred -----HHHhcCCC-CeEEEEEEEECCcC-CC--------C-CCCEEEEec-CC-----------------CCCceEEEEE
Confidence 67788887 58899999998864 11 0 111222221 11 1123334455
Q ss_pred CCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhhHHHHc-CCCC
Q 038727 421 PSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREF-GLTG 499 (565)
Q Consensus 421 ~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~-~~~~ 499 (565)
++...+...|. ..++++++. .+.. ..+. ....+++.+.+++.|.++++.- ..++...+. .|.+-+ ....
T Consensus 346 ~s~~~~~~~p~-~~~l~~~~~-~~~~---~~~~-~~~~e~~~~~~~~~L~~~~g~~-~~p~~~~v~---~w~~a~p~~~~ 415 (475)
T 3lov_A 346 IDQKWNHSAPD-HTVLRAFVG-RPGN---DHLV-HESDEVLQQAVLQDLEKICGRT-LEPKQVIIS---RLMDGLPAYTV 415 (475)
T ss_dssp HHHHCTTTCTT-EEEEEEEEC-BTTB---CGGG-GSCHHHHHHHHHHHHHHHHSSC-CCCSEEEEE---EEEEEEECCCT
T ss_pred EcccCCCCCCC-cEEEEEEeC-CCCC---Cccc-CCCHHHHHHHHHHHHHHHhCCC-CCCeEEEEE---EcccCCCCCCC
Confidence 55555666676 556666542 1111 1111 1246889999999999998642 233322221 232211 1111
Q ss_pred CccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHhhhh
Q 038727 500 GNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDFKKQ 563 (565)
Q Consensus 500 G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~~~~ 563 (565)
|.. .... ..++ ..+++++||||||+++. |.|+++| ||+.||++|+++++..
T Consensus 416 g~~----~~~~---~~~~-----~l~~~~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 416 GHA----DRIQ---RVRE-----EVLAQYPGIYLAGLAYD-GVGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp THH----HHHH---HHHH-----HHHHHSTTEEECSTTTS-CSSHHHHHHHHHHHHHHHHHTC---
T ss_pred ChH----HHHH---HHHH-----HHHhhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 110 0000 0111 12346789999999985 5689887 9999999999987653
No 16
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.95 E-value=1e-27 Score=246.19 Aligned_cols=328 Identities=12% Similarity=0.124 Sum_probs=206.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecc-cC-------------------CCceeccchhhhh
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEE-LI-------------------PGFKFSRCSYLQS 78 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~-------------------~G~~~d~g~~~~~ 78 (565)
.++||+|||||++||++|+.|+++|++|+|+|+++++||++.++. .. .+|.+|.|+.++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 458999999999999999999999999999999999999998876 21 3456666665432
Q ss_pred hhh--hhHhhhccccccCceeecCCCceeeecCCCcEEEEcCCh-HHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHh
Q 038727 79 LLR--PSVIRELELKKHGLKLLKPIATSFTPCLDGLYLLLGFDD-QQNNSEISKFSKRDADTYPRYENELSKFCKIMDFL 155 (565)
Q Consensus 79 ~~~--~~~~~~l~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (565)
... .++++++|+.++ +++.+.++.+ .+.+|+.+.++.+. ......+..+. +...+.++...+ ..+
T Consensus 85 ~~~~l~~ll~~lgl~~~-l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~-------~~~ 152 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRY-LDFKVVEGSF--VYKGGKIYKVPSTETEALASNLMGMF--EKRRFRKFLVFV-------ANF 152 (433)
T ss_dssp TTSHHHHHHHHHTGGGG-CCEEECCEEE--EEETTEEEECCCSHHHHHHCSSSCHH--HHHHHHHHHHHH-------HHC
T ss_pred ccchHHHHHHHcCCccc-eEEEEeCceE--EeeCCEEEECCCCHHHHhhCcccChh--hHHHHHHHHHHH-------Hhh
Confidence 211 268888888776 7777765433 24577777776663 22222222111 222222222222 111
Q ss_pred hcCCCCCCcCCCchhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH-HHhc
Q 038727 156 LDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD-AITG 234 (565)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~g 234 (565)
....+.. . ...+....++.+++++++.++.++.++... .++.
T Consensus 153 -~~~~p~~-------~-----------------------------~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~ 195 (433)
T 1d5t_A 153 -DENDPKT-------F-----------------------------EGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYR 195 (433)
T ss_dssp -CTTCGGG-------G-----------------------------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS
T ss_pred -cccCchh-------c-----------------------------cccccccCCHHHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 1000000 0 000124578888999999999998887643 1111
Q ss_pred cCCCCCCChh--HHHHHHHHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC
Q 038727 235 SMASIHAPGS--GYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD 312 (565)
Q Consensus 235 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~ 312 (565)
+......+.. .+.+..+.........+.+.+++||++.++++|++.+++.|++|+++++|++|..++ +++.+|.. +
T Consensus 196 ~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~-~ 273 (433)
T 1d5t_A 196 TDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKS-E 273 (433)
T ss_dssp SSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEE-T
T ss_pred CCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEE-C
Confidence 1111122221 122222222111112233459999999999999999999999999999999999988 88887774 6
Q ss_pred CcEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCC
Q 038727 313 GTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGC 392 (565)
Q Consensus 313 G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (565)
|+++.||+||+|++++. ..+ . ++....+.+++ ++++..+. ....+ ++++++.
T Consensus 274 g~~~~ad~VV~a~~~~~--~~~-~-------------~~~~~~~~~~i---l~~~~~~~-------~~~~~--~~i~~~~ 325 (433)
T 1d5t_A 274 GEVARCKQLICDPSYVP--DRV-R-------------KAGQVIRIICI---LSHPIKNT-------NDANS--CQIIIPQ 325 (433)
T ss_dssp TEEEECSEEEECGGGCG--GGE-E-------------EEEEEEEEEEE---ESSCCTTS-------TTCSS--EEEEECG
T ss_pred CeEEECCEEEECCCCCc--ccc-c-------------ccCcceeEEEE---EcCccccc-------CCCce--EEEEeCc
Confidence 77899999999998875 222 1 11112334432 55543221 01122 3777732
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcc
Q 038727 393 ESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQ 441 (565)
Q Consensus 393 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~ 441 (565)
++++..+++++++++ .||+++|+|+++++++++
T Consensus 326 ---------------~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~~~ 358 (433)
T 1d5t_A 326 ---------------NQVNRKSDIYVCMIS-YAHNVAAQGKYIAIASTT 358 (433)
T ss_dssp ---------------GGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEEEE
T ss_pred ---------------cccCCCCCEEEEEEC-CCCcccCCCCEEEEEEEe
Confidence 235678999999999 999999999999988754
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.95 E-value=2.8e-26 Score=241.70 Aligned_cols=279 Identities=18% Similarity=0.161 Sum_probs=155.8
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCC-CcEEEEcccCCCCCeeeecccCCCceeccchhhhhhh-hh---hHhhhccccc
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGG-LSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLL-RP---SVIRELELKK 92 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~-~~---~~~~~l~l~~ 92 (565)
++++||||||||++||+||+.|+++| ++|+|||+++++||++.|....+|+.+|.|++++... .. .++.++++..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLND 85 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCC
Confidence 34579999999999999999999999 9999999999999999887633799999999775432 22 2334454422
Q ss_pred cCceeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhh
Q 038727 93 HGLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHD 172 (565)
Q Consensus 93 ~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (565)
....+ .+.++..+.+..+... ........+..+.+.+..+... ...... . ....++.+
T Consensus 86 ~~~~~---------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~--~~d~s~~~ 143 (516)
T 1rsg_A 86 GRTRF---------VFDDDNFIYIDEERGR-------VDHDKELLLEIVDNEMSKFAEL---EFHQHL-G--VSDCSFFQ 143 (516)
T ss_dssp CCCCE---------ECCCCCCEEEETTTEE-------CTTCTTTCHHHHHHHHHHHHHH---HC----------CCBHHH
T ss_pred cceeE---------EECCCCEEEEcCCCcc-------ccccHHHHHHHHHHHHHHHHHH---Hhhhcc-C--CCCCCHHH
Confidence 11111 1223433333322110 0000111222222222222111 111000 0 00011111
Q ss_pred hhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCCh---HHHHHHHHH-HHhccCCCCCCChhHHHH
Q 038727 173 LLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESD---VLKATVAAD-AITGSMASIHAPGSGYVL 248 (565)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~-~~~g~~~~~~~~~~~~~~ 248 (565)
.+. ..+.. . ...+.+. .+..++... .+.+. .+...+..+.+
T Consensus 144 ~l~----------~~l~~--------------~---------~~~l~~~~~~~~~~~~~~~~~~~g~--~~~~~s~~~~~ 188 (516)
T 1rsg_A 144 LVM----------KYLLQ--------------R---------RQFLTNDQIRYLPQLCRYLELWHGL--DWKLLSAKDTY 188 (516)
T ss_dssp HHH----------HHHHH--------------H---------GGGSCHHHHHHHHHHHGGGHHHHTB--CTTTSBHHHHC
T ss_pred HHH----------HHHHH--------------h---------hcccCHHHHHHHHHHHHHHHHHhCC--ChHHCChHHHH
Confidence 100 00000 0 0000000 011111100 11222 22333222211
Q ss_pred HHHHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChH
Q 038727 249 LHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
. . ..+...++.| ++.++++|++.+.. ++|++|++|++|..++ ++.+.|++.+|+++.||+||+|+++.
T Consensus 189 -----~--~-~~~~~~~~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~-~~~v~v~~~~g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 189 -----F--G-HQGRNAFALN-YDSVVQRIAQSFPQ--NWLKLSCEVKSITREP-SKNVTVNCEDGTVYNADYVIITVPQS 256 (516)
T ss_dssp -----C--C-CSSCCEEESC-HHHHHHHHHTTSCG--GGEETTCCEEEEEECT-TSCEEEEETTSCEEEEEEEEECCCHH
T ss_pred -----h--h-ccCcchhhhC-HHHHHHHHHHhCCC--CEEEECCEEEEEEEcC-CCeEEEEECCCcEEECCEEEECCCHH
Confidence 1 1 1222236777 99999999776643 6899999999999874 33345899999889999999999988
Q ss_pred HHHhh-----------cCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCC
Q 038727 329 KTFMG-----------LVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKL 367 (565)
Q Consensus 329 ~~~~~-----------l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 367 (565)
.+ .. +.-.+++|+...++++++.+ .+..+|++.++++
T Consensus 257 ~l-~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~-~~~~Kv~l~f~~~ 304 (516)
T 1rsg_A 257 VL-NLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHF-GALGKVIFEFEEC 304 (516)
T ss_dssp HH-HGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCC-CCCEEEEEEESSC
T ss_pred Hh-hhccccccccccceEecCCCCHHHHHHHHhCCC-CcceEEEEEeCCC
Confidence 75 32 22234589999999999998 4889999999886
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.94 E-value=5.6e-26 Score=238.79 Aligned_cols=436 Identities=15% Similarity=0.103 Sum_probs=232.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeeccc-CCCceeccchhhhhhhh---hhHhhhccccccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEEL-IPGFKFSRCSYLQSLLR---PSVIRELELKKHG 94 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~-~~G~~~d~g~~~~~~~~---~~~~~~l~l~~~g 94 (565)
..+||+|||||++||+||+.|+++|++|+|||+++++||++.+... ..|+.+|.|++++.... .++++++|+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~- 110 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN- 110 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce-
Confidence 4579999999999999999999999999999999999999877642 46888999886553322 245666655321
Q ss_pred ceeecCCCceeeecCCCcEEEEcCChHHHHHHHh-ccchhhh-hhhHH-HHHHHHHHHHHHHHhhcCCCCCCcCCCchhh
Q 038727 95 LKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEIS-KFSKRDA-DTYPR-YENELSKFCKIMDFLLDSPPPEALHGDLSFH 171 (565)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (565)
.+...+...+.. .+|....... .......+. .+.+... ..... +..........+...
T Consensus 111 -~~~~~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 171 (498)
T 2iid_A 111 -EFSQENDNAWYF-IKNIRKKVGE-VKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRT---------------- 171 (498)
T ss_dssp -EECSCCTTSEEE-ETTEEEEHHH-HHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHS----------------
T ss_pred -eecccCCccEEE-eCCeeecccc-cccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhc----------------
Confidence 111111111111 1121111000 000000000 0001000 00000 000001100000000
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccC-ChHHHHHHHHHHHhccCCCCCCChhHHHHHH
Q 038727 172 DLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFE-SDVLKATVAADAITGSMASIHAPGSGYVLLH 250 (565)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~ 250 (565)
... .....+...++.+++..... ++.....+.. +.+...... ......+..
T Consensus 172 -----------------------~~~--~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~ 223 (498)
T 2iid_A 172 -----------------------NCS--YILNKYDTYSTKEYLIKEGDLSPGAVDMIGD--LLNEDSGYY-VSFIESLKH 223 (498)
T ss_dssp -----------------------CHH--HHHHHHTTSBHHHHHHHTSCCCHHHHHHHHH--HTTCGGGTT-SBHHHHHHH
T ss_pred -----------------------cHH--HHHHHhhhhhHHHHHHHccCCCHHHHHHHHH--hcCcccchh-HHHHHHHHH
Confidence 000 00111233455566555431 2322222211 111000000 011111111
Q ss_pred HHhccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc----EEecCEEEECCC
Q 038727 251 HVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT----RVHSSFVLSNAT 326 (565)
Q Consensus 251 ~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~----~~~ad~VI~a~~ 326 (565)
... ......+.++.||++.|+++|++.+.+ +|++|++|++|..++ +++. |++.+|+ ++.||+||+|+|
T Consensus 224 ~~~---~~~~~~~~~~~gG~~~l~~~l~~~l~~---~i~~~~~V~~I~~~~-~~v~-v~~~~~~~~~~~~~ad~vI~t~p 295 (498)
T 2iid_A 224 DDI---FAYEKRFDEIVDGMDKLPTAMYRDIQD---KVHFNAQVIKIQQND-QKVT-VVYETLSKETPSVTADYVIVCTT 295 (498)
T ss_dssp HHH---HTTCCCEEEETTCTTHHHHHHHHHTGG---GEESSCEEEEEEECS-SCEE-EEEECSSSCCCEEEESEEEECSC
T ss_pred Hhc---cccCcceEEeCCcHHHHHHHHHHhccc---ccccCCEEEEEEECC-CeEE-EEEecCCcccceEEeCEEEECCC
Confidence 110 011223347899999999999887754 799999999999987 7765 7777664 479999999999
Q ss_pred hHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhh
Q 038727 327 PYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAW 406 (565)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (565)
+..+ ..+...+.+|+...++++++.++ +..+|++.++++. |. +.. ..+...+.
T Consensus 296 ~~~~-~~i~f~p~Lp~~~~~ai~~l~~~-~~~kv~l~~~~~~-w~-------~~~--~~~~~~~~--------------- 348 (498)
T 2iid_A 296 SRAV-RLIKFNPPLLPKKAHALRSVHYR-SGTKIFLTCTTKF-WE-------DDG--IHGGKSTT--------------- 348 (498)
T ss_dssp HHHH-TTSEEESCCCHHHHHHHHHCCEE-CEEEEEEEESSCG-GG-------GGT--CCSSEEEE---------------
T ss_pred hHHH-hheecCCCCCHHHHHHHHhCCCc-ceeEEEEEeCCCC-cc-------CCC--ccCCcccC---------------
Confidence 9874 66654455999999999999985 6889999998852 32 110 01111111
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCc----EeE
Q 038727 407 NGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSS----VIG 482 (565)
Q Consensus 407 ~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~----i~~ 482 (565)
+.+..+++.++. ..|.|..+++.++...... .|+. ...+++.+.+++.|+++++.-.+. ...
T Consensus 349 -----~~~~~~~~~~s~----~~p~g~~~L~~~~~g~~a~----~~~~-~~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~ 414 (498)
T 2iid_A 349 -----DLPSRFIYYPNH----NFTNGVGVIIAYGIGDDAN----FFQA-LDFKDCADIVFNDLSLIHQLPKKDIQSFCYP 414 (498)
T ss_dssp -----SSTTCEEECCSS----CCTTSCEEEEEEEEHHHHH----TTTT-SCHHHHHHHHHHHHHHHHTCCHHHHHHHEEE
T ss_pred -----CCCcceEEECCC----CCCCCCcEEEEEeCCccHh----hhhc-CCHHHHHHHHHHHHHHHcCCChhhhhhhcCc
Confidence 112224555542 2466777766653211110 1322 145789999999999998622111 111
Q ss_pred EEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCC-CCCccCc--chHHHHHHHHHH
Q 038727 483 YDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHP-GGGVMGA--PGRNAAHVVLQD 559 (565)
Q Consensus 483 ~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~-g~g~~~a--sg~~aa~~i~~~ 559 (565)
..+ ..|.+. ....|+..... +.+....++ ..++|++||||||+++.. .+++.|| ||++||++|++.
T Consensus 415 ~~~---~~W~~~-p~~~G~~~~~~--~~~~~~~~~-----~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~ 483 (498)
T 2iid_A 415 SVI---QKWSLD-KYAMGGITTFT--PYQFQHFSD-----PLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLA 483 (498)
T ss_dssp EEE---EEGGGC-TTTCSSEECCC--TTHHHHHHH-----HHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cEE---EecCCC-CCCCceeeecC--CcchHHHHH-----HHhCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 111 235442 23344432111 111111122 234578999999999843 3456787 999999999998
Q ss_pred hhh
Q 038727 560 FKK 562 (565)
Q Consensus 560 ~~~ 562 (565)
+..
T Consensus 484 l~~ 486 (498)
T 2iid_A 484 SEN 486 (498)
T ss_dssp HHC
T ss_pred hcC
Confidence 753
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.93 E-value=4.1e-24 Score=220.43 Aligned_cols=406 Identities=17% Similarity=0.140 Sum_probs=217.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecc--cCCCceeccchhhhhhh-hhh---HhhhccccccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEE--LIPGFKFSRCSYLQSLL-RPS---VIRELELKKHG 94 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~--~~~G~~~d~g~~~~~~~-~~~---~~~~l~l~~~g 94 (565)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.. +.+|+.++.|+.++... .+. .++++|+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~---- 77 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGI---- 77 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTC----
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCC----
Confidence 7999999999999999999999999999999999999998653 45699999998765444 443 3444544
Q ss_pred ceeecCCCceeee--cCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhh
Q 038727 95 LKLLKPIATSFTP--CLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHD 172 (565)
Q Consensus 95 ~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (565)
+........... ..++..... + +...............+......+....+.....
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------- 135 (431)
T 3k7m_X 78 -PTAAASEFTSFRHRLGPTAVDQA-------------F-PIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQD------- 135 (431)
T ss_dssp -CEEECCCCCEECCBSCTTCCSSS-------------S-CCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSS-------
T ss_pred -eeeecCCCCcEEEEecCCeecCC-------------C-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcc-------
Confidence 333222111111 111111000 0 0000011111111111111111110000000000
Q ss_pred hhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH--HHhccCCCCCCChhHHHHHH
Q 038727 173 LLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD--AITGSMASIHAPGSGYVLLH 250 (565)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~g~~~~~~~~~~~~~~~~ 250 (565)
...+. .++.+++......+....++... ...+. .....+....+..
T Consensus 136 -----------------------------~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~ 183 (431)
T 3k7m_X 136 -----------------------------LEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQ--PADQASALWMLQL 183 (431)
T ss_dssp -----------------------------CGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSS--CTTTSBHHHHHHH
T ss_pred -----------------------------hhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHH
Confidence 00001 34444555544444444443221 12221 2222222111111
Q ss_pred H-Hhccc--c-CCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCC
Q 038727 251 H-VMGET--D-GDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNAT 326 (565)
Q Consensus 251 ~-~~~~~--~-~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~ 326 (565)
. ..... . ...... .+.+|+..+++.++ ++.| +|++|++|++|..++ +++. |++.+|++++||+||+|++
T Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 184 VAAHHYSILGVVLSLDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQSG-DVVN-VTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp HHHTTSCHHHHHHTCCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECSS-SSEE-EEETTSCCEEEEEEEECSC
T ss_pred HHhcCCccceeecchhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEcC-CeEE-EEECCCCEEEeCEEEEecC
Confidence 0 00000 0 001111 46889988888874 4456 999999999999887 7776 8888998899999999999
Q ss_pred hHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhh
Q 038727 327 PYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAW 406 (565)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (565)
+.. +..+.-.+.+|....+.++...+. ..++|++.++.+. . .++...+
T Consensus 257 ~~~-l~~i~~~p~l~~~~~~~~~~~~~~-~~~kv~~~~~~~~--~---------------~i~~~~d------------- 304 (431)
T 3k7m_X 257 MNT-WRRIVFTPALPERRRSVIEEGHGG-QGLKILIHVRGAE--A---------------GIECVGD------------- 304 (431)
T ss_dssp GGG-GGGSEEESCCCHHHHHHHHHCCCC-CEEEEEEEEESCC--T---------------TEEEEBS-------------
T ss_pred cch-HhheeeCCCCCHHHHHHHHhCCCc-ceEEEEEEECCCC--c---------------CceEcCC-------------
Confidence 887 466654566898888889888774 6699999888752 1 1111111
Q ss_pred cCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeC
Q 038727 407 NGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLL 486 (565)
Q Consensus 407 ~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~ 486 (565)
+....++...+. ..+..++..++.... ++.. .. +++.+.|++++|++. ++....
T Consensus 305 ----~~~~~~~~~~~~-------~~~~~~l~~~~~g~~-------~~~~-~~----~~~~~~l~~~~~~~~--~~~~~~- 358 (431)
T 3k7m_X 305 ----GIFPTLYDYCEV-------SESERLLVAFTDSGS-------FDPT-DI----GAVKDAVLYYLPEVE--VLGIDY- 358 (431)
T ss_dssp ----SSSSEEEEEEEC-------SSSEEEEEEEEETTT-------CCTT-CH----HHHHHHHHHHCTTCE--EEEEEC-
T ss_pred ----CCEEEEEeCcCC-------CCCCeEEEEEecccc-------CCCC-CH----HHHHHHHHHhcCCCC--ccEeEe-
Confidence 111222222211 133444544432111 1111 11 245677888999764 221111
Q ss_pred ChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCC--CCCCccCc--chHHHHHHHHHH
Q 038727 487 TPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSH--PGGGVMGA--PGRNAAHVVLQD 559 (565)
Q Consensus 487 tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~--~g~g~~~a--sg~~aa~~i~~~ 559 (565)
..|... ....|+.... .+.+....++ ..+.|..+|||||+.+. ..+-+.|| ||++||++|+..
T Consensus 359 --~~W~~d-~~~~G~~~~~--~~g~~~~~~~-----~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 359 --HDWIAD-PLFEGPWVAP--RVGQFSRVHK-----ELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp --CCTTTC-TTTSSSSCCC--CTTTTTTSSG-----GGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred --cccCCC-CCCCCCCCCc--CCCCCcccHH-----HHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 245443 3334543211 2222222233 45578899999996653 22345687 999999999864
No 20
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.91 E-value=4.6e-23 Score=212.03 Aligned_cols=267 Identities=16% Similarity=0.143 Sum_probs=151.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCC-CcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhccccccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGG-LSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKHG 94 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~g 94 (565)
+++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. .+|+.+|.|++++....+ ++++++|+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~--- 80 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDK--- 80 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCC---
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCc---
Confidence 5689999999999999999999999 99999999999999999876 679999999876543323 466666543
Q ss_pred ceeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhhh
Q 038727 95 LKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDLL 174 (565)
Q Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (565)
+..........+.+|.......+... ...+...+.++...+............ +.. .
T Consensus 81 --~~~~~~~~~~~~~~g~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~-~ 137 (424)
T 2b9w_A 81 --VDGPKLRREFLHEDGEIYVPEKDPVR---------------GPQVMAAVQKLGQLLATKYQGYDANGH-----YNK-V 137 (424)
T ss_dssp --CCSCCCCEEEECTTSCEECGGGCTTH---------------HHHHHHHHHHHHHHHHTTTTTTTSSSS-----SSC-C
T ss_pred --cccccccceeEcCCCCEeccccCccc---------------chhHHHHHHHHHHHHhhhhhhcccccc-----hhh-h
Confidence 22222222233445543321111100 000111112222222111111000000 000 0
Q ss_pred hhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHHHhccCCCCCCChhHHHHHHHHhc
Q 038727 175 RDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVLLHHVMG 254 (565)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 254 (565)
.+....++.+++++...+. +...+........+..+...++.+. +.+...
T Consensus 138 ----------------------------~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~ 187 (424)
T 2b9w_A 138 ----------------------------HEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYGHFDNVPAAYV-LKYLDF 187 (424)
T ss_dssp ----------------------------CGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCCCTTTSBHHHH-HHHSCH
T ss_pred ----------------------------hhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccCChHhcCHHHH-HHhhhH
Confidence 0012345566666554433 2222211111111122333333332 111100
Q ss_pred ---cccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHH
Q 038727 255 ---ETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTF 331 (565)
Q Consensus 255 ---~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~ 331 (565)
......+.| .+.||++.++++|.+.+ +.+|+++++|++|..++ +++. |++.+|+ +.||+||+|+++..+
T Consensus 188 ~~~~~~~~~~~~-~~~~g~~~l~~~l~~~l---~~~v~~~~~V~~i~~~~-~~v~-v~~~~g~-~~ad~Vv~a~~~~~~- 259 (424)
T 2b9w_A 188 VTMMSFAKGDLW-TWADGTQAMFEHLNATL---EHPAERNVDITRITRED-GKVH-IHTTDWD-RESDVLVLTVPLEKF- 259 (424)
T ss_dssp HHHHHHHHTCCB-CCTTCHHHHHHHHHHHS---SSCCBCSCCEEEEECCT-TCEE-EEESSCE-EEESEEEECSCHHHH-
T ss_pred hhhhcccCCceE-EeCChHHHHHHHHHHhh---cceEEcCCEEEEEEEEC-CEEE-EEECCCe-EEcCEEEECCCHHHH-
Confidence 000112345 78899999999996655 56899999999999887 7776 8888886 899999999999885
Q ss_pred hhcCCCCCCCHHHHHHHhhcCC
Q 038727 332 MGLVPRDVLPDDFLRAIKYSDY 353 (565)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~ 353 (565)
.++++. . +..++.+.++.+
T Consensus 260 ~~~l~~--~-~~~~~~~~~~~~ 278 (424)
T 2b9w_A 260 LDYSDA--D-DDEREYFSKIIH 278 (424)
T ss_dssp TTSBCC--C-HHHHHHHTTCEE
T ss_pred hhccCC--C-HHHHHHHhcCCc
Confidence 566643 2 333445666655
No 21
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.91 E-value=2.4e-23 Score=216.53 Aligned_cols=423 Identities=14% Similarity=0.102 Sum_probs=229.6
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCC-CcEEEEcccCCCCCeeeecccCCCceeccchhhhhhhhh---hHhhhcccccc
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGG-LSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRP---SVIRELELKKH 93 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~~~~~~~~---~~~~~l~l~~~ 93 (565)
.+++||+|||||++||+||++|+++| .+|+|||+++++||++.+....+|+.+|.|++.+....+ ++++++. .
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~-- 83 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-Q-- 83 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-S--
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-h--
Confidence 35689999999999999999999998 899999999999999988534789999999976544434 3445542 1
Q ss_pred CceeecCCCceeeecCCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCcCCCchhhhh
Q 038727 94 GLKLLKPIATSFTPCLDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCKIMDFLLDSPPPEALHGDLSFHDL 173 (565)
Q Consensus 94 g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (565)
++.+.....+. +.+|+.+.++... .+..+..... ...+..+... . ..... ....++.+.
T Consensus 84 --~~~~~~~~~~~-~~~g~~~~~P~~~-----~~~~l~~~~~------~~~~~~ll~~-~--~~~~~----~~~~s~~e~ 142 (484)
T 4dsg_A 84 --GWNVLQRESWV-WVRGRWVPYPFQN-----NIHRLPEQDR------KRCLDELVRS-H--ARTYT----EPPNNFEES 142 (484)
T ss_dssp --CEEEEECCCEE-EETTEEEESSGGG-----CGGGSCHHHH------HHHHHHHHHH-H--HCCCS----SCCSSHHHH
T ss_pred --hhhhccCceEE-EECCEEEEeCccc-----hhhhCCHHHH------HHHHHHHHHH-H--hccCC----CCCCCHHHH
Confidence 12221111111 2255555544110 0111111110 0011111111 0 01100 001111111
Q ss_pred hhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHHH-Hhcc-CCCCCCCh-hHHHHHH
Q 038727 174 LRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAADA-ITGS-MASIHAPG-SGYVLLH 250 (565)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-~~g~-~~~~~~~~-~~~~~~~ 250 (565)
+ ...+.+.+.+.+-.+.....+.... .+.. +..+.-+. ....++.
T Consensus 143 ~--------------------------------~~~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~ 190 (484)
T 4dsg_A 143 F--------------------------------TRQFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRR 190 (484)
T ss_dssp H--------------------------------HHHHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHH
T ss_pred H--------------------------------HHHhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHH
Confidence 1 1111112222222222222221100 0000 00000010 0111111
Q ss_pred HHhcccc----CCCcccccc-CCchHHHHHHHHHHHHHcCcEEEeC--cceeEEEecCCCceeEEEeCCCcEEecCEEEE
Q 038727 251 HVMGETD----GDRNLWSHV-EGGMGSVSLAISKAATKAGAHILVN--TEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLS 323 (565)
Q Consensus 251 ~~~~~~~----~~~g~~~~~-~gG~~~l~~~l~~~l~~~G~~i~~~--~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~ 323 (565)
..+.... ...+.+.|| .||++.++++|++.+.+. +|+++ ++|++|..++ ++ |++.+|+++.||+||+
T Consensus 191 ~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~VI~ 264 (484)
T 4dsg_A 191 NIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADA-KT---ITFSNGEVVSYDYLIS 264 (484)
T ss_dssp HHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTT-TE---EEETTSCEEECSEEEE
T ss_pred HHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecC-CE---EEECCCCEEECCEEEE
Confidence 1111100 112334455 499999999998877542 79999 5699999877 64 5568888899999999
Q ss_pred CCChHHHHhhcCCC--CCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHH
Q 038727 324 NATPYKTFMGLVPR--DVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSA 401 (565)
Q Consensus 324 a~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (565)
|+++..+ .+++.+ ..+++...+.++++.| .++.+|+++++.+.. . ...+.+ .+++++
T Consensus 265 a~p~~~~-~~ll~~~~~~~~~~~~~~l~~l~y-~s~~~v~l~~~~~~~-~-------~~~~~~--~i~vp~--------- 323 (484)
T 4dsg_A 265 TVPFDNL-LRMTKGTGFKGYDEWPAIADKMVY-SSTNVIGIGVKGTPP-P-------HLKTAC--WLYFPE--------- 323 (484)
T ss_dssp CSCHHHH-HHHEECSSCTTGGGHHHHHHHCCE-EEEEEEEEEEESCCC-G-------GGTTCC--EEECCS---------
T ss_pred CCCHHHH-HHHhhccCCCCCHHHHHHHhCCCc-CceEEEEEEEcCCCc-c-------cCCCCe--EEEEEc---------
Confidence 9999885 677743 3467888888999998 589999999987531 0 000122 455432
Q ss_pred HHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC--Cc
Q 038727 402 CQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS--SS 479 (565)
Q Consensus 402 ~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~--~~ 479 (565)
++.+...++++++++|..+|+|++++++.....+ .|.. .++++.+.+++.|.++. .+. +.
T Consensus 324 ---------~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~------~~~~--~d~~l~~~a~~~L~~~~-~~~~~~~ 385 (484)
T 4dsg_A 324 ---------DTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESK------YKPV--NHSTLIEDCIVGCLASN-LLLPEDL 385 (484)
T ss_dssp ---------TTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBT------TBCC--CTTSHHHHHHHHHHHTT-SCCTTCC
T ss_pred ---------CCCeEEEEEeecCCCcccCCCCeEEEEEEEecCc------CCcC--CHHHHHHHHHHHHHHcC-CCCccce
Confidence 1234456888899999999999998887643221 1211 24788999999999874 443 22
Q ss_pred EeEEEeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCC---CccCc--chHHHHH
Q 038727 480 VIGYDLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGG---GVMGA--PGRNAAH 554 (565)
Q Consensus 480 i~~~~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~---g~~~a--sg~~aa~ 554 (565)
+...++. .|...++. ....+. ....+ .++ ... .. |||++|....... +++.+ +|+.||+
T Consensus 386 ~~~~~v~---r~~~~yP~--y~~~~~-~~~~~---~~~-----~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~ 449 (484)
T 4dsg_A 386 LVSKWHY---RIEKGYPT--PFIGRN-NLLEK---AQP-----ELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAID 449 (484)
T ss_dssp EEEEEEE---EEEEEEEC--CBTTHH-HHHHH---HHH-----HHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHH
T ss_pred EEEEEEE---EeCccccC--CCccHH-HHHHH---HHH-----HHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHHH
Confidence 3322221 12222111 111000 00110 111 111 23 9999998542222 45555 9999999
Q ss_pred HHH
Q 038727 555 VVL 557 (565)
Q Consensus 555 ~i~ 557 (565)
.|+
T Consensus 450 ~i~ 452 (484)
T 4dsg_A 450 HVL 452 (484)
T ss_dssp HHT
T ss_pred HHH
Confidence 998
No 22
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.91 E-value=2.8e-23 Score=207.20 Aligned_cols=231 Identities=13% Similarity=0.144 Sum_probs=148.1
Q ss_pred ccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCCC--CCCCH
Q 038727 265 HVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPR--DVLPD 342 (565)
Q Consensus 265 ~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~--~~~~~ 342 (565)
...+|+..+.++|++.+ |++|+++++|++|..++ +++. |++.+|+++.||.||+|+++..+ .+|+.+ +.+|+
T Consensus 106 ~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~-~~~~-v~~~~g~~~~ad~vV~A~p~~~~-~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 106 VAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRD-DKWE-VSKQTGSPEQFDLIVLTMPVPEI-LQLQGDITTLISE 179 (342)
T ss_dssp ECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECS-SSEE-EEESSSCCEEESEEEECSCHHHH-TTCBSTHHHHSCH
T ss_pred ecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcC-CEEE-EEECCCCEEEcCEEEECCCHHHH-HHHhcccccccCH
Confidence 66889999999997765 89999999999999987 7776 88888887899999999998885 788864 34677
Q ss_pred HHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCC
Q 038727 343 DFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPS 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 422 (565)
...+.++++.|. ++.+|++.++++. +. +. + ..+. +.+. ....-+++..+
T Consensus 180 ~~~~~l~~~~~~-~~~~v~l~~~~~~-~~-------~~-~-~~g~-~~~~-------------------~~~~~~~~~~~ 228 (342)
T 3qj4_A 180 CQRQQLEAVSYS-SRYALGLFYEAGT-KI-------DV-P-WAGQ-YITS-------------------NPCIRFVSIDN 228 (342)
T ss_dssp HHHHHHHTCCBC-CEEEEEEECSSCC----------CC-S-CSEE-ECSS-------------------CSSEEEEEEHH
T ss_pred HHHHHHhcCCcc-ccEEEEEEECCCC-cc-------CC-c-eeeE-EccC-------------------CcceEEEEccc
Confidence 888999999995 8999999998642 11 00 1 1122 2210 11122343333
Q ss_pred CCCCCCC-CCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCc
Q 038727 423 SLDKTIS-PPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGN 501 (565)
Q Consensus 423 ~~d~~~~-p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~ 501 (565)
.+ |.+. |++...+++++. ..|.. .+.+ ..++++.+.+++.|.++++... ..+...+. .|. ...|..
T Consensus 229 ~k-~~r~~~~~~~~~v~~~~-~~~~~---~~~~-~~~~~~~~~~~~~l~~~~g~~~-~p~~~~v~---rW~--~a~p~~- 295 (342)
T 3qj4_A 229 KK-RNIESSEIGPSLVIHTT-VPFGV---TYLE-HSIEDVQELVFQQLENILPGLP-QPIATKCQ---KWR--HSQVTN- 295 (342)
T ss_dssp HH-TTCCCC-CCCEEEEEEC-HHHHH---HTTT-SCHHHHHHHHHHHHHHHSCSCC-CCSEEEEE---EET--TCSBSS-
T ss_pred cC-CCCCCCCCCceEEEECC-HHHHH---Hhhc-CCHHHHHHHHHHHHHHhccCCC-CCceeeec---ccc--cccccc-
Confidence 33 3322 333444555532 11110 1111 2468999999999999998443 33333331 232 122211
Q ss_pred cccccCCccccccCCCCCCCCCCC-CCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHh
Q 038727 502 IFHGAMGLDSLFLMRPVKGWSGYR-TPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDF 560 (565)
Q Consensus 502 ~~g~~~~~~~~~~~rp~~~~~~~~-t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~ 560 (565)
+.. .+|. ... ...+||++||||+. |.|+++| ||+.||++|+++|
T Consensus 296 --~~~--------~~~~----~~~~~~~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 296 --AAA--------NCPG----QMTLHHKPFLACGGDGFT-QSNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp --CCS--------SSCS----CEEEETTTEEEECSGGGS-CSSHHHHHHHHHHHHHHHTTC-
T ss_pred --ccC--------CCcc----eeEecCCccEEEEccccC-CCCccHHHHHHHHHHHHHHhhC
Confidence 110 1220 112 35789999999985 5699988 9999999998653
No 23
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.89 E-value=3.1e-22 Score=217.09 Aligned_cols=240 Identities=14% Similarity=0.084 Sum_probs=143.6
Q ss_pred cccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhh--cCCCCCCC
Q 038727 264 SHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMG--LVPRDVLP 341 (565)
Q Consensus 264 ~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~--l~~~~~~~ 341 (565)
..+.+|++.+.++|++ |++|+++++|++|..++ +++. |++.+|+++.||+||+|+|+..+ .. +...+.+|
T Consensus 527 ~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~~-~~v~-V~~~~G~~i~Ad~VIvA~P~~vL-~~~~i~f~P~Lp 598 (776)
T 4gut_A 527 TLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYSG-DEVQ-VTTTDGTGYSAQKVLVTVPLALL-QKGAIQFNPPLS 598 (776)
T ss_dssp EECTTCTHHHHHHHHT-----TSCEESSCCEEEEECSS-SSEE-EEETTCCEEEESEEEECCCHHHH-HTTCSEEESCCC
T ss_pred EEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEcC-CEEE-EEECCCcEEEcCEEEECCCHHHH-hhcccccCCCCC
Confidence 4678999999988864 67899999999999887 7776 88889988999999999998774 43 22245689
Q ss_pred HHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcC
Q 038727 342 DDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIP 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 421 (565)
+...+.++++.+ .++.+|++.++++. |. +...+....-++.... .....+.+...
T Consensus 599 ~~~~~ai~~l~~-g~~~KV~l~f~~~F-W~-------~~~~g~~~fG~l~~~~----------------~~~~~~~~~~d 653 (776)
T 4gut_A 599 EKKMKAINSLGA-GIIEKIALQFPYRF-WD-------SKVQGADFFGHVPPSA----------------SKRGLFAVFYD 653 (776)
T ss_dssp HHHHHHHHHEEE-ECCEEEEEECSSCT-TH-------HHHTTCSEEEECCSSG----------------GGTTEEEEEEE
T ss_pred HHHHHHHHhCCC-eeEEEEEEecCccc-cc-------ccCCCCceEEeecCCc----------------CCCceEEEEec
Confidence 999999999987 47899999998752 32 1000000011121100 01222233221
Q ss_pred CCCCCCCCCCC-ccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC-CcEeEEEeCChhhHHHHcCCCC
Q 038727 422 SSLDKTISPPG-KHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS-SSVIGYDLLTPPDLEREFGLTG 499 (565)
Q Consensus 422 ~~~d~~~~p~G-~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~t~~~~~~~~~ 499 (565)
. .|+| ..++..++...... .+.. ...+++.+.+++.|.++++.-. ...+...+. +|.+. ....
T Consensus 654 ~------~p~g~~~vL~~~i~G~~a~----~l~~-lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt---~W~~d-p~s~ 718 (776)
T 4gut_A 654 M------DPQKKHSVLMSVIAGEAVA----SVRT-LDDKQVLQQCMATLRELFKEQEVPDPTKYFVT---RWSTD-PWIQ 718 (776)
T ss_dssp S------CTTSCSCEEEEEECTHHHH----HHHT-SCHHHHHHHHHHHHHHHTTTSCCCCCSEEEEC---CGGGC-TTTC
T ss_pred C------CCCCCceEEEEEecchhHH----HHHc-CCHHHHHHHHHHHHHHHhCcccccCcceEEEe---cCCCC-CccC
Confidence 1 2444 34555553221110 1111 1458899999999999997522 223333332 36554 3334
Q ss_pred CccccccCCccccccCCCCCCCCCCCCC-CCCeEEcCCCCCCC--CCccCc--chHHHHHHHHH
Q 038727 500 GNIFHGAMGLDSLFLMRPVKGWSGYRTP-VRGLYLCGSGSHPG--GGVMGA--PGRNAAHVVLQ 558 (565)
Q Consensus 500 G~~~g~~~~~~~~~~~rp~~~~~~~~t~-i~~lylaG~~~~~g--~g~~~a--sg~~aa~~i~~ 558 (565)
|+.-.... .+.....+ ....| ..+|||||+++++. +.+.|| ||++||++|++
T Consensus 719 Gsys~~~~--g~~~~~~~-----~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 719 MAYSFVKT--GGSGEAYD-----IIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CSEEEEBT--TCCTHHHH-----HHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCCccCC--CCchhHHH-----HHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 43321110 00000000 11223 36799999998642 345677 99999999975
No 24
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.89 E-value=9.6e-22 Score=212.09 Aligned_cols=248 Identities=15% Similarity=0.166 Sum_probs=147.4
Q ss_pred ccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC------CcEEecCEEEECCChHHHHhhc
Q 038727 261 NLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD------GTRVHSSFVLSNATPYKTFMGL 334 (565)
Q Consensus 261 g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~------G~~~~ad~VI~a~~~~~~~~~l 334 (565)
+.+..++||++.|+++|++ +.+|++|++|++|..++ +++. |++.+ |+++.||+||+|+|+..+ .++
T Consensus 391 g~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~-~~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL-~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA-SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEET-TEEE-EEEEESSCTTCEEEEEESEEEECCCHHHH-HCS
T ss_pred CceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECC-CcEE-EEEeecccCCCCeEEEeCEEEECCCHHHH-hcc
Confidence 4444789999999999965 45899999999999987 7665 77655 567999999999998874 553
Q ss_pred C----CCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCC
Q 038727 335 V----PRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLP 410 (565)
Q Consensus 335 ~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 410 (565)
. -.+++|+...++++++.++ ++.+|++.++++. |. .. ... .-++... .
T Consensus 463 ~~~i~f~P~LP~~k~~Ai~~l~~g-~~~KV~l~f~~~f-W~-------~~-~~~--~G~l~~~----------------~ 514 (662)
T 2z3y_A 463 PPAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVF-WD-------PS-VNL--FGHVGST----------------T 514 (662)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCC-SC-------TT-CSE--EEECCSS----------------S
T ss_pred cCceEEcCCCCHHHHHHHHhCCcc-ceeEEEEEcCccc-cc-------CC-CCc--eeeecCC----------------C
Confidence 1 2356999889999999984 8899999998852 32 10 111 1111110 0
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC-CcEeEEEeCChh
Q 038727 411 SRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS-SSVIGYDLLTPP 489 (565)
Q Consensus 411 ~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~ 489 (565)
...+.+++..++. +..+++.++...... .++. ...+++.+.+++.|.++++.-. ..+....+.
T Consensus 515 ~~~~~~~~~~~~~--------~~~vL~~~~~G~~a~----~~~~-lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~--- 578 (662)
T 2z3y_A 515 ASRGELFLFWNLY--------KAPILLALVAGEAAG----IMEN-ISDDVIVGRCLAILKGIFGSSAVPQPKETVVS--- 578 (662)
T ss_dssp TTTTEEEEEECCS--------SSSEEEEEECTHHHH----HHTT-SCHHHHHHHHHHHHHHHHCTTSSCCCSEEEEC---
T ss_pred CCCCceeEEEeCC--------CCCEEEEEeccHhHH----HHHh-CCHHHHHHHHHHHHHHHhCCcccCCCceeEEE---
Confidence 1123334443321 223555543211110 1111 1468889999999999986532 233333332
Q ss_pred hHHHHcCCCCCccccccCC--cc-ccccCCCCCC---CCCCCCCCCCeEEcCCCCCC--CCCccCc--chHHHHHHHHHH
Q 038727 490 DLEREFGLTGGNIFHGAMG--LD-SLFLMRPVKG---WSGYRTPVRGLYLCGSGSHP--GGGVMGA--PGRNAAHVVLQD 559 (565)
Q Consensus 490 t~~~~~~~~~G~~~g~~~~--~~-~~~~~rp~~~---~~~~~t~i~~lylaG~~~~~--g~g~~~a--sg~~aa~~i~~~ 559 (565)
.|.+. ....|++...... .. .-...+|..+ ....+++.++|||||+++.. .+.+.|| ||++||++|++.
T Consensus 579 ~W~~d-p~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~ 657 (662)
T 2z3y_A 579 RWRAD-PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 657 (662)
T ss_dssp CTTTC-TTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EECCC-CCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 35543 3334433211110 00 0001122100 00235567899999999864 2355687 999999999988
Q ss_pred hh
Q 038727 560 FK 561 (565)
Q Consensus 560 ~~ 561 (565)
+.
T Consensus 658 ~~ 659 (662)
T 2z3y_A 658 FL 659 (662)
T ss_dssp HT
T ss_pred cc
Confidence 75
No 25
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.88 E-value=5.3e-21 Score=200.11 Aligned_cols=192 Identities=10% Similarity=0.044 Sum_probs=126.9
Q ss_pred HHhccHHHHHHcccCChHHHHHHHHHHHhccCCCCCCChhHHHH---HHHHhccccCCCccccccCCchHHHHHHHHHHH
Q 038727 205 ILLSPTTKILNKWFESDVLKATVAADAITGSMASIHAPGSGYVL---LHHVMGETDGDRNLWSHVEGGMGSVSLAISKAA 281 (565)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~gG~~~l~~~l~~~l 281 (565)
+...++.+++++++.++.++.++.... +.. .....+....+ ..+......+..+.|.|+.||++.|+++|.+.+
T Consensus 312 ~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~-~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 312 YEGTTFSEYLKTQKLTPNLQYFVLHSI--AMT-SETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp TTTSBHHHHHTTSSSCHHHHHHHHHHT--TC---CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTHHHHHHHHHH
T ss_pred hccCCHHHHHHHhCCCHHHHHHHHHHH--hcc-CCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCchhHHHHHHHHHH
Confidence 357899999999999999998886431 221 12221222221 122211111222456699999999999999999
Q ss_pred HHcCcEEEeCcceeEEEecCC-CceeEEEeCCCcEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEE
Q 038727 282 TKAGAHILVNTEVSQIMIGDS-GEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKI 360 (565)
Q Consensus 282 ~~~G~~i~~~~~V~~I~~~~~-~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v 360 (565)
+..|++|+++++|++|..+++ +++++|++.+|+++.||+||++. .. ++.. + . .+..+ ..+.++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~-----lp~~-~----~---~~~~~-~~v~R~ 452 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SY-----LSEN-T----C---SRVQY-RQISRA 452 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GG-----BCTT-T----T---TTCCC-EEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hh-----cCHh-H----h---ccccc-cceEEE
Confidence 999999999999999988753 67889988889999999999932 22 2221 1 0 11223 357788
Q ss_pred EEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCccEEEEEc
Q 038727 361 NVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSSLDKTISPPGKHVVSLFT 440 (565)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~ 440 (565)
.+.++.++.-. .. .++...+.++.. . ...+.+++++++. +++.+|+|++++.+.+
T Consensus 453 i~i~~~pi~~~-------~~-~~~~~~iiiP~~-------------~---g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 453 VLITDGSVLRT-------DA-DQQVSILTVPAE-------------E---PGSFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp EEEESSCSSCC-------SC-CCCCEEEEECCS-------------S---TTSCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred EEEecCCCCCc-------CC-CcceEEEEccCc-------------c---CCCCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 88888864210 11 112335555332 1 2457889988887 8889999999888764
No 26
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.88 E-value=1.4e-21 Score=213.10 Aligned_cols=249 Identities=15% Similarity=0.163 Sum_probs=147.5
Q ss_pred ccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC------CcEEecCEEEECCChHHHHhhc
Q 038727 261 NLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD------GTRVHSSFVLSNATPYKTFMGL 334 (565)
Q Consensus 261 g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~------G~~~~ad~VI~a~~~~~~~~~l 334 (565)
+.+..++||++.|+++|++. .+|++|++|++|..++ +++. |++.+ |+++.||+||+|+|+..+ .++
T Consensus 562 g~~~~~~gG~~~L~~aLa~~-----l~I~Lnt~V~~I~~~~-~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vL-k~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEG-----LDIKLNTAVRQVRYTA-SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTT-----CCEECSEEEEEEEEET-TEEE-EEEEESSSTTCEEEEEESEEEECCCHHHH-HCS
T ss_pred CceEEecCcHHHHHHHHHhC-----CCEEeCCeEEEEEEcC-CcEE-EEEeecccCCCCeEEECCEEEECCCHHHH-Hhh
Confidence 44557899999999999653 4799999999999987 7765 77654 567999999999998874 553
Q ss_pred C----CCCCCCHHHHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCC
Q 038727 335 V----PRDVLPDDFLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLP 410 (565)
Q Consensus 335 ~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 410 (565)
+ ..+.+|....++++++.++ ++.+|++.++++. |. .. ....+ ++....
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g-~v~KV~L~F~~~f-W~-------~~-~~~fG--~l~~~~---------------- 685 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVF-WD-------PS-VNLFG--HVGSTT---------------- 685 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCC-SC-------TT-CCEEE--ECCSSS----------------
T ss_pred hcccccCCCCCHHHHHHHHcCCcc-ceEEEEEEcCCcc-cC-------CC-CCeee--eecccc----------------
Confidence 2 2356899889999999984 8899999998852 32 10 11111 111100
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCC-CcEeEEEeCChh
Q 038727 411 SRRPVMEMTIPSSLDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFS-SSVIGYDLLTPP 489 (565)
Q Consensus 411 ~~~~~~~~~~~~~~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~ 489 (565)
.....+++..++. +..+++.++...... .++. ...+++.+.+++.|.++|+.-. ..+....+.
T Consensus 686 ~~~~~l~~~~~~~--------~~pvLl~~v~G~~a~----~l~~-lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vt--- 749 (852)
T 2xag_A 686 ASRGELFLFWNLY--------KAPILLALVAGEAAG----IMEN-ISDDVIVGRCLAILKGIFGSSAVPQPKETVVS--- 749 (852)
T ss_dssp TTTTTTCEEEECS--------SSSEEEEEECHHHHH----HGGG-SCHHHHHHHHHHHHHHHHCTTTCCCCSEEEEC---
T ss_pred CCCCceEEEecCC--------CCCEEEEEecCcCHH----HHhc-CCHHHHHHHHHHHHHHHhCccccCCceEEEEE---
Confidence 0001111221111 123555553211110 1111 2468899999999999986532 233333332
Q ss_pred hHHHHcCCCCCccccccCC--cc-ccccCCCCCC---CCCCCCCCCCeEEcCCCCCC--CCCccCc--chHHHHHHHHHH
Q 038727 490 DLEREFGLTGGNIFHGAMG--LD-SLFLMRPVKG---WSGYRTPVRGLYLCGSGSHP--GGGVMGA--PGRNAAHVVLQD 559 (565)
Q Consensus 490 t~~~~~~~~~G~~~g~~~~--~~-~~~~~rp~~~---~~~~~t~i~~lylaG~~~~~--g~g~~~a--sg~~aa~~i~~~ 559 (565)
.|.+. ....|++...... .. .-....|..+ ....+++.++|||||+++.. .+.+.|| ||++||++|+..
T Consensus 750 rW~~d-p~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~ 828 (852)
T 2xag_A 750 RWRAD-PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 828 (852)
T ss_dssp CTTTC-TTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred ecCCC-CCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 35543 3334433211110 00 0011122100 01235677899999999853 2355677 999999999998
Q ss_pred hhh
Q 038727 560 FKK 562 (565)
Q Consensus 560 ~~~ 562 (565)
+..
T Consensus 829 l~~ 831 (852)
T 2xag_A 829 FLG 831 (852)
T ss_dssp HHC
T ss_pred hhC
Confidence 743
No 27
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.88 E-value=3.5e-22 Score=203.53 Aligned_cols=261 Identities=13% Similarity=0.156 Sum_probs=161.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeeccc-------------------CCCceeccchhhhhh
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEEL-------------------IPGFKFSRCSYLQSL 79 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~-------------------~~G~~~d~g~~~~~~ 79 (565)
+++||+|||+|++|+++|+.|+++|++|+|+|+++++||.+.+... ..+|.+|.++.++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 4689999999999999999999999999999999999999887641 114677777665432
Q ss_pred hh--hhHhhhccccccCceeecCCCceeeec-------CCCcEEEEcCChHHHHHHHhccchhhhhhhHHHHHHHHHHHH
Q 038727 80 LR--PSVIRELELKKHGLKLLKPIATSFTPC-------LDGLYLLLGFDDQQNNSEISKFSKRDADTYPRYENELSKFCK 150 (565)
Q Consensus 80 ~~--~~~~~~l~l~~~g~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (565)
.. -+++.++++.++ +++.+....+.... .+++...++.+....... ..+...+...+.++...+.
T Consensus 99 ~g~L~~lL~~~gv~~y-lef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~-~lLs~~eK~~l~kFL~~l~---- 172 (475)
T 3p1w_A 99 GGNLVKILKKTRVTNY-LEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVS-PLLSLMEKNRCKNFYQYVS---- 172 (475)
T ss_dssp TSHHHHHHHHTTCGGG-SCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTC-TTSCHHHHHHHHHHHHHHH----
T ss_pred CcHHHHHHHHCCchhe-eEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhc-cCCCHHHHHHHHHHHHHHH----
Confidence 22 246667788888 89988776554331 245555556553332211 1133333333322222221
Q ss_pred HHHHhhcCCCCCCcCCCchhhhhhhhhhhhhHHHHHHHHHhhhcCcccHHHHHHHHhccHHHHHHcccCChHHHHHHHHH
Q 038727 151 IMDFLLDSPPPEALHGDLSFHDLLRDKMQKSVFWARCLRHVLSLGQKDLVDFMDILLSPTTKILNKWFESDVLKATVAAD 230 (565)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 230 (565)
.+....+ ..... .+....++.++++++..++.++..+...
T Consensus 173 ---~~~~~~~-~~~~~------------------------------------~~l~~~s~~e~l~~~gls~~l~~fl~~a 212 (475)
T 3p1w_A 173 ---EWDANKR-NTWDN------------------------------------LDPYKLTMLEIYKHFNLCQLTIDFLGHA 212 (475)
T ss_dssp ---HCCTTCG-GGSTT------------------------------------CCTTTSBHHHHHHHTTCCHHHHHHHHHH
T ss_pred ---hhhhccc-hhhhc------------------------------------ccccCCCHHHHHHHcCCCHHHHHHHHHH
Confidence 1111100 00000 0012356777777777777777655321
Q ss_pred -HHhccCCCCCCChh-HHHH-HHHH--hccccCCCccccccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEe-cCCCc
Q 038727 231 -AITGSMASIHAPGS-GYVL-LHHV--MGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMI-GDSGE 304 (565)
Q Consensus 231 -~~~g~~~~~~~~~~-~~~~-~~~~--~~~~~~~~g~~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~-~~~~~ 304 (565)
++.........+.. .+.. ..+. +.. .. ...+.||+||++.|+++|++.+++.|++|+++++|++|.. ++ ++
T Consensus 213 laL~~~~~~~~~~a~~~l~ri~~y~~Sl~~-yg-~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~ 289 (475)
T 3p1w_A 213 VALYLNDDYLKQPAYLTLERIKLYMQSISA-FG-KSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NK 289 (475)
T ss_dssp TSCCSSSGGGGSBHHHHHHHHHHHHHHHHH-HS-SCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTT-SC
T ss_pred HHhhcCCCcccCCHHHHHHHHHHHHHHHhh-cC-CCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-Ce
Confidence 11110000011211 1111 1111 111 12 2345699999999999999999999999999999999998 67 88
Q ss_pred eeEEEeCCCcEEecCEEEECCChH
Q 038727 305 VDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 305 v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
+++|++.+|+++.||+||++++..
T Consensus 290 v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 290 VCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EEEEEETTSCEEEEEEEEECGGGC
T ss_pred EEEEEECCCcEEECCEEEECCCcc
Confidence 999999999889999999998754
No 28
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.86 E-value=1e-20 Score=200.57 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=76.2
Q ss_pred ccccCCchHHHHHHHHHHHHHcCcEEEeCccee--EEEecCCC------ceeEE-EeCCCc--EEecCEEEECCChHHHH
Q 038727 263 WSHVEGGMGSVSLAISKAATKAGAHILVNTEVS--QIMIGDSG------EVDGV-LLVDGT--RVHSSFVLSNATPYKTF 331 (565)
Q Consensus 263 ~~~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~--~I~~~~~~------~v~~V-~~~~G~--~~~ad~VI~a~~~~~~~ 331 (565)
+..+.||++.|+++|++.+.+ |+.|+++++|+ +|..++++ .|+ | ...+|+ ++.||+||+|+++..+.
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEE-EEEecCCceEEEEcCEEEECCCHHHHh
Confidence 458999999999999988753 57789999999 99886513 144 6 456676 78999999999988742
Q ss_pred h-----hcC----------------------CCCCC-C-------HHHHHHHhhcCCCCceEEEEEec
Q 038727 332 M-----GLV----------------------PRDVL-P-------DDFLRAIKYSDYHSGVTKINVAV 364 (565)
Q Consensus 332 ~-----~l~----------------------~~~~~-~-------~~~~~~~~~~~~~~~~~~v~~~~ 364 (565)
. ++- .++.+ | ....+++++++| .+..||++.+
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~-~~s~Kv~l~~ 483 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHM-ARSSKVFATV 483 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCE-ECEEEEEEEE
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCc-ccceEEEEEE
Confidence 1 221 12335 8 888999999998 4889999999
No 29
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.82 E-value=1.2e-18 Score=173.24 Aligned_cols=223 Identities=14% Similarity=0.150 Sum_probs=133.2
Q ss_pred ccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEe-cCEEEECCChHHHHhhcCCCCCCCHH
Q 038727 265 HVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVH-SSFVLSNATPYKTFMGLVPRDVLPDD 343 (565)
Q Consensus 265 ~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~-ad~VI~a~~~~~~~~~l~~~~~~~~~ 343 (565)
....|+..+.+++.+ |++|+++++|++|..++ +++. |++.+|+.+. ||+||+|.++..+ .+++.. .+.
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~~-~~~~-v~~~~g~~~~~a~~vV~a~g~~~~-~~~~~~---~~~ 172 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRGE-EHWN-LLDAEGQNHGPFSHVIIATPAPQA-STLLAA---APK 172 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEECS-SCEE-EEETTSCEEEEESEEEECSCHHHH-GGGGTT---CHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEeC-CEEE-EEeCCCcCccccCEEEEcCCHHHH-HHhhcc---CHH
Confidence 345677787777754 78999999999999887 7766 8888888664 8999999999885 566643 345
Q ss_pred HHHHHhhcCCCCceEEEEEecCCCCccccccCCCcCCCCccccEEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCC
Q 038727 344 FLRAIKYSDYHSGVTKINVAVDKLPQFHCCKSSQLEVGPHHTATVHIGCESMEEIGSACQDAWNGLPSRRPVMEMTIPSS 423 (565)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 423 (565)
....+..+.|. ++.++.+.++.+. +. + .. ..++. +.+.-++...+.
T Consensus 173 l~~~~~~~~~~-~~~~~~~~~~~~~-~~----------~-~~-~~~~~--------------------~~~~~~l~~~~~ 218 (336)
T 1yvv_A 173 LASVVAGVKMD-PTWAVALAFETPL-QT----------P-MQ-GCFVQ--------------------DSPLDWLARNRS 218 (336)
T ss_dssp HHHHHTTCCEE-EEEEEEEEESSCC-SC----------C-CC-EEEEC--------------------SSSEEEEEEGGG
T ss_pred HHHHHhhcCcc-ceeEEEEEecCCC-CC----------C-CC-eEEeC--------------------CCceeEEEecCc
Confidence 66778888885 8889999888752 11 1 11 22331 123223332221
Q ss_pred CCCCCCCCCccEEEEEcccccCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCCCcEeEEEeCChhhHHHHcCCCCCccc
Q 038727 424 LDKTISPPGKHVVSLFTQYTPYKPSDGSWEDPTYRESYAQKCFSLIDEYAPGFSSSVIGYDLLTPPDLEREFGLTGGNIF 503 (565)
Q Consensus 424 ~d~~~~p~G~~~v~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~t~~~~~~~~~G~~~ 503 (565)
.|...+.+. .++++.. ..+.. .+.. ...+++.+++++.+.++++.-........+ ..|. + ..+.+.
T Consensus 219 -~p~~~~~~~-~~v~~~~-~~~~~---~~~~-~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~---~rw~-~-a~~~~~-- 284 (336)
T 1yvv_A 219 -KPERDDTLD-TWILHAT-SQWSR---QNLD-ASREQVIEHLHGAFAELIDCTMPAPVFSLA---HRWL-Y-ARPAGA-- 284 (336)
T ss_dssp -STTCCCSSE-EEEEEEC-HHHHH---HTTT-SCHHHHHHHHHHHHHTTCSSCCCCCSEEEE---EEEE-E-EEESSC--
T ss_pred -CCCCCCCCc-EEEEEeC-HHHHH---HHHh-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEc---cccC-c-cCCCCC--
Confidence 233323222 3333321 11100 0111 145788999999999887532111111111 1121 0 111110
Q ss_pred cccCCccccccCCCCCCCCCCCCCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHhhh
Q 038727 504 HGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDFKK 562 (565)
Q Consensus 504 g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~~~ 562 (565)
..+ .....+.++|+||||+++. +|+.+| ||+.+|+.|.+.+.+
T Consensus 285 -----------~~~----~~~~~~~~rl~laGDa~~g-~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 285 -----------HEW----GALSDADLGIYVCGDWCLS-GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp -----------CCC----SCEEETTTTEEECCGGGTT-SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred -----------CCC----CeeecCCCCEEEEecCCCC-CCHHHHHHHHHHHHHHHHHHhhh
Confidence 000 0112345899999999964 588887 999999999998765
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.76 E-value=1.1e-18 Score=177.00 Aligned_cols=95 Identities=25% Similarity=0.296 Sum_probs=68.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccCCCCCeeeecccC-CCcee-ccchhhhhhhhhh---Hhhhccccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRHVIGGAAVTEELI-PGFKF-SRCSYLQSLLRPS---VIRELELKK 92 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~-~G~~~-d~g~~~~~~~~~~---~~~~l~l~~ 92 (565)
.++||+|||||++||+||++|+++ |++|+|||+++++||++.+.... .|+.+ +.|++++....+. +++++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~-- 83 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTD-- 83 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCC--
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhh--
Confidence 468999999999999999999999 99999999999999999987632 68887 5898876654554 4445443
Q ss_pred cCceeecCCCceeeecCCCcEEEEcCCh
Q 038727 93 HGLKLLKPIATSFTPCLDGLYLLLGFDD 120 (565)
Q Consensus 93 ~g~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (565)
+.+...... .+.+|+.+.++.+.
T Consensus 84 ----~~~~~~~~~-~~~~G~~~~~p~~~ 106 (399)
T 1v0j_A 84 ----FTDYRHRVF-AMHNGQAYQFPMGL 106 (399)
T ss_dssp ----BCCCCCCEE-EEETTEEEEESSSH
T ss_pred ----hhccccceE-EEECCEEEeCCCCH
Confidence 111122222 23367766666553
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.76 E-value=4e-18 Score=170.72 Aligned_cols=66 Identities=26% Similarity=0.377 Sum_probs=56.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceec-cchhhhhhhhhhHhh
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFS-RCSYLQSLLRPSVIR 86 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d-~g~~~~~~~~~~~~~ 86 (565)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+.. ..|+.+| .|++++....+.+++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~ 67 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWD 67 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHH
Confidence 36999999999999999999999999999999999999998876 5788885 888876554454433
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.75 E-value=2.8e-17 Score=165.59 Aligned_cols=67 Identities=19% Similarity=0.277 Sum_probs=56.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccC-CCcee-ccchhhhhhhhhhHhh
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELI-PGFKF-SRCSYLQSLLRPSVIR 86 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~-~G~~~-d~g~~~~~~~~~~~~~ 86 (565)
++||+|||||++||++|+.|+++|++|+|+|+++++||++.+.... .|+.+ |.|++++....+++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~ 71 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWN 71 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHH
Confidence 4799999999999999999999999999999999999999887632 68876 8999887655554443
No 33
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.64 E-value=1.7e-15 Score=150.09 Aligned_cols=74 Identities=28% Similarity=0.420 Sum_probs=61.0
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc-CCCCCeeeeccc---------CCCceeccchhhhhhhhh---hHh
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR-HVIGGAAVTEEL---------IPGFKFSRCSYLQSLLRP---SVI 85 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~-~~~GG~~~t~~~---------~~G~~~d~g~~~~~~~~~---~~~ 85 (565)
..+||+|||||++||+||+.|+++|++|+|||++ +++||++.+... ..|+.+|.|++++....+ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~~ 122 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLALI 122 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHHH
Confidence 5689999999999999999999999999999999 999999988652 357889998865433333 567
Q ss_pred hhccccc
Q 038727 86 RELELKK 92 (565)
Q Consensus 86 ~~l~l~~ 92 (565)
+++|+..
T Consensus 123 ~~lGl~~ 129 (376)
T 2e1m_A 123 DKLGLKR 129 (376)
T ss_dssp HHTTCCE
T ss_pred HHcCCCc
Confidence 8887754
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.61 E-value=1.1e-15 Score=152.86 Aligned_cols=97 Identities=22% Similarity=0.245 Sum_probs=70.5
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCce-eccchhhhhhhhhh---Hhhhccccc
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFK-FSRCSYLQSLLRPS---VIRELELKK 92 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~-~d~g~~~~~~~~~~---~~~~l~l~~ 92 (565)
...++||+|||||++||+||+.|+++|++|+|+|+++++||.+.+.....|+. +|.|++++....+. ++++++.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~-- 103 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTE-- 103 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCC--
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhh--
Confidence 34578999999999999999999999999999999999999998765467886 49999876544443 4455532
Q ss_pred cCceeecCCCceeeecCCCcEEEEcCCh
Q 038727 93 HGLKLLKPIATSFTPCLDGLYLLLGFDD 120 (565)
Q Consensus 93 ~g~~~~~~~~~~~~~~~~g~~~~~~~~~ 120 (565)
+.+..... ..+.+|+.+.++...
T Consensus 104 ----~~~~~~~~-~~~~~g~l~~lP~~~ 126 (397)
T 3hdq_A 104 ----WRPYQHRV-LASVDGQLLPIPINL 126 (397)
T ss_dssp ----EEECCCBE-EEEETTEEEEESCCH
T ss_pred ----cccccccc-eEEECCEEEEcCCCh
Confidence 21111111 223477777776653
No 35
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.46 E-value=7e-13 Score=134.49 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC-CCc--EEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV-DGT--RVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~-~G~--~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+-+.|.+.+++.|++++++++|+.+..++ ++++++... +++ +++||.||-|-+....+.+.++
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g 169 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecccccceEEEEeEEEeCCccccHHHHHcC
Confidence 456677778888999999999999999988 888766653 333 5899999999888776555543
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.45 E-value=1.8e-12 Score=133.46 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCc---ceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 270 MGSVSLAISKAATKAGAHILVNT---EVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~---~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
...+.++|.+.++++|++|++++ +|++|..++ +++++|++.+|+++.||.||+|++.+. ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~~i~Ad~VV~AtG~~s--~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTADGKIWRAERTFLCAGASA--GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETTTEEEECSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECCCCEEECCEEEECCCCCh--hhhcC
Confidence 46789999999999999999999 999999988 899999999998899999999999986 46654
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.43 E-value=4e-12 Score=127.54 Aligned_cols=59 Identities=12% Similarity=0.046 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G--~~~~ad~VI~a~~~~~ 329 (565)
...+.++|.+.++++|++|+++++|++|..++ +++..|.+.+| .++.||.||+|++.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEECCCceeEEEeCEEEECCCcch
Confidence 46789999999999999999999999999887 66445888888 3799999999999986
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.39 E-value=2.5e-12 Score=129.76 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...++++|.+.++++|++|+++++|++|..++ ++ .+|++.+| ++.||+||+|++.+.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCCC-EEEcCEEEECCChhH
Confidence 36789999999999999999999999999887 76 45888888 699999999999886
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.35 E-value=3.1e-11 Score=121.81 Aligned_cols=58 Identities=24% Similarity=0.357 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.|.+.+++.|++|+++++|++|..++ +++.+|++.+| +++||.||+|++.+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-CEEEEEEECCc-EEECCEEEECcchhH
Confidence 35788999999999999999999999999988 88888988888 699999999999886
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.34 E-value=2.9e-11 Score=131.20 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=55.4
Q ss_pred ccCCch---HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc-EEecCEEEECCChHHHHhhcCC
Q 038727 265 HVEGGM---GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT-RVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 265 ~~~gG~---~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~-~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
++.+|. ..++++|.+.+++.|++|+++++|++|..++ +++ .|++.+|+ ++.||.||+|++.+. ..+..
T Consensus 403 ~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~~i~Ad~VVlAtG~~s--~~l~~ 474 (689)
T 3pvc_A 403 YPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRID-SQW-QLTFGQSQAAKHHATVILATGHRL--PEWEQ 474 (689)
T ss_dssp ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS-SSE-EEEEC-CCCCEEESEEEECCGGGT--TCSTT
T ss_pred ecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-CeE-EEEeCCCcEEEECCEEEECCCcch--hcccc
Confidence 454443 6889999999999999999999999999988 775 48888886 799999999999885 45543
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.33 E-value=3.7e-11 Score=130.25 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
..++++|.+.+++.|++|+++++|++|..++ +++ .|++.+|.++.||.||+|++.+. ..+..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s--~~l~~ 478 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQI--SRFSQ 478 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGG--GCSTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcch--hcccc
Confidence 6789999999999999999999999999988 775 58888877899999999999885 45543
No 42
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.33 E-value=2.7e-11 Score=123.20 Aligned_cols=57 Identities=25% Similarity=0.351 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++.+|++.+| ++.||.||+|++.+.
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCCc-eEECCEEEECCchhH
Confidence 4788999999999999999999999999887 88888998888 699999999999876
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.32 E-value=6.1e-12 Score=127.49 Aligned_cols=62 Identities=10% Similarity=0.144 Sum_probs=53.3
Q ss_pred ccCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 265 HVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 265 ~~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
++......+.+.|.+.+++.|++|+++++|++|..++ +++. |++.+| +++||.||+|++.+.
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-~~~~-V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA-SGFR-VTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TEEE-EEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CEEE-EEECCc-EEEeeEEEECCCCcc
Confidence 5555667889999999999999999999999999887 6644 888888 799999999999775
No 44
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.30 E-value=1.5e-11 Score=126.49 Aligned_cols=60 Identities=23% Similarity=0.253 Sum_probs=53.4
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
....+.+.|.+.+++.|++|+++++|++|..++ +++.+|++.+|++++||.||+|++...
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 346788999999999999999999999999887 887889999998899999999998766
No 45
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.30 E-value=3.6e-11 Score=125.82 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=51.4
Q ss_pred CchHHHHHHHHHHHHHcCcEEEeCcceeEEEec-CCCceeEEEeCCC-c--EEecC-EEEECCChHH
Q 038727 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIG-DSGEVDGVLLVDG-T--RVHSS-FVLSNATPYK 329 (565)
Q Consensus 268 gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~-~~~~v~~V~~~~G-~--~~~ad-~VI~a~~~~~ 329 (565)
+|...+.+.|.+.+++.|++|+++++|++|..+ + +++++|++.++ + ++.|| .||+|++...
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 344588999999999999999999999999998 6 89999887643 2 58996 8999998765
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.29 E-value=1.1e-11 Score=125.84 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe---CCCcEEecCEEEECCChHHHHhhcC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL---VDGTRVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~---~~G~~~~ad~VI~a~~~~~~~~~l~ 335 (565)
.+.+.|.+.+++.|++|+++++|++|..++ +++++|++ .++.+++||.||.|.+.+..+.+.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 566778888888999999999999999888 88887877 3456899999999999887655554
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.28 E-value=3e-11 Score=121.42 Aligned_cols=61 Identities=23% Similarity=0.245 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++. |++.+|+ +.||.||+|++.+. ..|++
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~-v~~~~g~-~~a~~vV~a~G~~s--~~l~~ 209 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-DGVT-IETADGE-YQAKKAIVCAGTWV--KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSEE-EEESSCE-EEEEEEEECCGGGG--GGTST
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-CEEE-EEECCCe-EEcCEEEEcCCccH--Hhhcc
Confidence 5788999999999999999999999999887 6654 8888885 99999999999886 46665
No 48
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.27 E-value=1.4e-11 Score=124.22 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++ +|++.+| ++.||.||+|++.+.
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 5788999999999999999999999999887 777 6888877 699999999999875
No 49
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.26 E-value=6.1e-11 Score=119.89 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++. |++.+| ++.||.||+|++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~-v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP-DSVK-IETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SCEE-EEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-CeEE-EEeCCC-EEEeCEEEEecCccH
Confidence 5788999999999999999999999999887 6654 777776 699999999999876
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.25 E-value=1.4e-11 Score=130.15 Aligned_cols=59 Identities=27% Similarity=0.363 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC---C--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD---G--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G--~~~~ad~VI~a~~~~~ 329 (565)
...+..+|++.++++|++|+++++|++|..++ +++.+|++.+ | .++.||.||.|++++.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 36789999999999999999999999999988 8888888764 3 3689999999999986
No 51
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.22 E-value=1.3e-10 Score=123.30 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CCc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G~--~~~ad~VI~a~~~~~ 329 (565)
...+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||++++.+.
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 457889999999999999999999999987643677778775 675 689999999998765
No 52
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.21 E-value=3.2e-10 Score=120.39 Aligned_cols=59 Identities=20% Similarity=0.277 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CCc--EEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G~--~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||++++.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 57889999999999999999999999987643678878775 675 689999999998754
No 53
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.21 E-value=2.8e-10 Score=126.27 Aligned_cols=58 Identities=26% Similarity=0.278 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.++|.+.++++|++|+++++|++|..++ +++.+|++.+| +++||+||+|++.+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECCc-EEECCEEEECCccch
Confidence 35789999999999999999999999999888 88878988888 699999999999886
No 54
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.19 E-value=2.9e-10 Score=115.20 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++. |++.+| +++||.||+|++.+.
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v~-v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDA-DGVS-VTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEEE-EEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-CeEE-EEECCC-EEEcCEEEEcCCcCh
Confidence 5678899999999999999999999999877 7665 777766 699999999999874
No 55
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.16 E-value=1.6e-10 Score=120.39 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|++|..++ +++.+|++.+|+++.||.||+|++...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4678889999999999999999999999988 888889999999999999999998875
No 56
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.15 E-value=2e-11 Score=117.56 Aligned_cols=55 Identities=22% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCCceeccchh
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSY 75 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G~~~d~g~~ 75 (565)
++||+|||||++||+||+.|+++|++|+||||++.+||++.+.. .++..+|.|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~ 56 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQ 56 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCcc
Confidence 58999999999999999999999999999999999999987755 56777777654
No 57
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.15 E-value=1.2e-10 Score=118.45 Aligned_cols=60 Identities=10% Similarity=0.148 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~ 335 (565)
.+.+.|.+.+++ ++|+++++|++|..++ +++. |++.+|+++.||.||.|.+.+..+.+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA-DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET-TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC-CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 456677776665 8899999999999887 7766 8889999999999999998876554444
No 58
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.15 E-value=2.6e-10 Score=120.60 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC-CC--cEEecCEEEECCChHHHHhhcC
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV-DG--TRVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~-~G--~~~~ad~VI~a~~~~~~~~~l~ 335 (565)
..+.+.|.+.+++.|++++.+++|++|..++ +++.+|++. +| .++.||.||.|.+....+.+.+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHc
Confidence 3567788888889999999999999999876 666778887 67 5799999999999887554444
No 59
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.14 E-value=8.9e-11 Score=119.13 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHc-CcEEEeCcceeEEEecCCCcee-EEEeCCCcEEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKA-GAHILVNTEVSQIMIGDSGEVD-GVLLVDGTRVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~v~-~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++. |++|+++++|++|..++ ++++ .|++.+|++++||.||.|.+.+..+.+.++.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~ 174 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLD 174 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSC
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEECCCCEEECCEEEECCCCChHHHHHhCC
Confidence 5677888888887 89999999999999887 7773 4888899889999999999988766666643
No 60
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.14 E-value=5.3e-10 Score=113.24 Aligned_cols=60 Identities=8% Similarity=0.074 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 273 VSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 273 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
+.+.|.+.+ .|++|+++++|++|..++ +++. |++.+|+++.||.||.|.+......+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS-ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC-CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 344444443 478999999999999887 7766 88899988999999999998876555543
No 61
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=2.5e-10 Score=120.70 Aligned_cols=58 Identities=14% Similarity=0.287 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CCc--EEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G~--~~~ad~VI~a~~~~~ 329 (565)
..++..+++.++++|++|+++++|++|..++ +++.+|++. +|+ +++||.||+|++++.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4678888898999999999999999999988 888888763 343 699999999999986
No 62
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.12 E-value=5.4e-10 Score=117.84 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCC----ceeEEEeCCC---cEEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSG----EVDGVLLVDG---TRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~----~v~~V~~~~G---~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+++.|++|+++++|++|..++ + +++ |++.++ .+++||.||.|.+.+..+.+.++
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHD-DDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEEC-GGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECC-CCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 567788888899999999999999999887 6 555 666665 67999999999999876666664
No 63
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.12 E-value=3.3e-10 Score=116.75 Aligned_cols=58 Identities=16% Similarity=0.205 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEe---------------cCCCceeEEEeCCCcEE--ecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMI---------------GDSGEVDGVLLVDGTRV--HSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~---------------~~~~~v~~V~~~~G~~~--~ad~VI~a~~~~~ 329 (565)
...+.++|.+.+++.|++|+++++|++|.. ++ +++.+|++.+| ++ .||.||+|++.+.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 357899999999999999999999999988 56 77777888888 58 9999999999886
No 64
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.11 E-value=4.2e-10 Score=115.03 Aligned_cols=65 Identities=9% Similarity=0.202 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCce-eEEEeCCCc--EEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEV-DGVLLVDGT--RVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v-~~V~~~~G~--~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++.|++|+++++|++|..++ +++ +.|.+.+|+ +++||.||.|.+....+.++++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~ 174 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGL 174 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCC
Confidence 567778888888899999999999999876 543 446668887 69999999999988766666543
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.11 E-value=6.1e-10 Score=112.40 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEec----CCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIG----DSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~----~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
....+.+.|.+.+++.|++|+++++|++|..+ + +++ .|++.+| +++||.||+|++...
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-VRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-CCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-CeE-EEEECCC-EEECCEEEECCCCcc
Confidence 44578889999999999999999999999977 5 555 4777777 699999999998776
No 66
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.11 E-value=6.3e-10 Score=111.99 Aligned_cols=60 Identities=17% Similarity=0.158 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+++.|++|+++++|++|.. + + .|++.+|+++.||.||.|.+......+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V-G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T-T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 5677888888888999999999999987 5 6 478888988999999999998876666554
No 67
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.10 E-value=1.8e-10 Score=118.87 Aligned_cols=64 Identities=23% Similarity=0.287 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CCc--EEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DGT--RVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G~--~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ +++||.||.|.+....+.+.++
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 456778888888999999999999999888 888777765 676 7999999999998876555554
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.09 E-value=1.5e-10 Score=120.30 Aligned_cols=58 Identities=17% Similarity=0.207 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++.+|+++.+|.||++++...
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 45678889999999999999999999999887 766 48899998899999999998654
No 69
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.09 E-value=2.4e-10 Score=116.51 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=53.5
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
....+.+.+.+.++++|++|+++++|++|..++ +++.+|++.+|+++.||.||++++...
T Consensus 192 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 192 AGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 346788889999999999999999999999888 888889999999999999999988654
No 70
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.08 E-value=5.5e-10 Score=116.96 Aligned_cols=63 Identities=14% Similarity=0.250 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CCc--EEecCEEEECCChHHHHhhcC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DGT--RVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G~--~~~ad~VI~a~~~~~~~~~l~ 335 (565)
.+.+.|.+.+++.|++|+++++|++|..++ +++.+|++. +|+ +++||.||.|.+.+..+.+.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 567788888888999999999999999988 887766654 574 799999999999887555555
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.08 E-value=5.2e-10 Score=117.30 Aligned_cols=45 Identities=29% Similarity=0.385 Sum_probs=40.0
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHH-HCCCcEEEEcccCCCCCeeee
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLA-RGGLSVAVLERRHVIGGAAVT 61 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La-~~G~~V~vlE~~~~~GG~~~t 61 (565)
.+.++||+|||||++||++|..|+ +.|++|+|+|+++.+||.+..
T Consensus 5 ~~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~ 50 (540)
T 3gwf_A 5 TTHTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYW 50 (540)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccc
Confidence 345689999999999999999999 899999999999999997643
No 72
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.05 E-value=3.6e-09 Score=112.01 Aligned_cols=60 Identities=27% Similarity=0.336 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CCc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G~--~~~ad~VI~a~~~~~ 329 (565)
...+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||++++...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 457889999999999999999999999987542678888775 665 589999999998654
No 73
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.05 E-value=5.4e-10 Score=115.55 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEE-eCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVL-LVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~-~~~G~~~~ad~VI~a~~~~~ 329 (565)
-...+.+.+.+.+++.|++|+++++|++|..++ +++..|+ +.+|+ +.+|.||++++...
T Consensus 209 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 209 FDQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 346788899999999999999999999999876 5545588 88998 99999999998754
No 74
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.04 E-value=3.2e-09 Score=110.48 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc---EEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT---RVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~---~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++.|++|+++++|++|..++ ++++ |++.+++ +++||+||.|.+.+....+.++.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~ 173 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG-AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGF 173 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC-CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcCC
Confidence 567777888888899999999999999887 7766 7777764 79999999999998876677643
No 75
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.03 E-value=9.5e-10 Score=115.43 Aligned_cols=43 Identities=30% Similarity=0.492 Sum_probs=39.9
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeee
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 60 (565)
..++||+|||||++||++|..|++.|++|+|||+++.+||.+.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 4568999999999999999999999999999999999999764
No 76
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.03 E-value=2.9e-09 Score=110.79 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc---EEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT---RVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~---~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++.|++|+++++|++|..++ ++++ |++.+++ +++||+||.|.+.+....+.++.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~ 174 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEG-DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGF 174 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECS-SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcCC
Confidence 567778888888899999999999999887 7776 7777764 79999999999998877777643
No 77
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.03 E-value=1.1e-09 Score=115.68 Aligned_cols=64 Identities=20% Similarity=0.231 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe--CCC-cEEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL--VDG-TRVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~--~~G-~~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++.|++|+++++|++|..++ ++++ |++ .+| ++++||.||.|.+.+..+.+.++-
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi 215 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAAD 215 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCC
Confidence 567788888888899999999999999887 7766 666 678 689999999999988776677643
No 78
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.03 E-value=3.5e-09 Score=112.15 Aligned_cols=59 Identities=12% Similarity=0.061 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEec-CCCceeEEEe---CCCc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIG-DSGEVDGVLL---VDGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~-~~~~v~~V~~---~~G~--~~~ad~VI~a~~~~~ 329 (565)
...+.+.|.+.+++.|++|+++++|++|..+ + +++.+|.+ .+|+ ++.|+.||+|++...
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 3578899999999999999999999999986 6 88888875 4565 589999999999865
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.02 E-value=1.3e-09 Score=114.45 Aligned_cols=44 Identities=30% Similarity=0.469 Sum_probs=40.0
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeee
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t 61 (565)
..++||+|||||++||++|..|++.|++|+|||+++.+||.+..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~ 62 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYW 62 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 45689999999999999999999999999999999999997653
No 80
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.02 E-value=6.8e-10 Score=112.66 Aligned_cols=60 Identities=18% Similarity=0.248 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
....+.+.+.+.+++.|++|+++++|++|..++ +++.+|++.+|+++.||.||++++...
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 456788899999999999999999999999887 888889999999999999999998653
No 81
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.02 E-value=1.8e-09 Score=103.72 Aligned_cols=41 Identities=34% Similarity=0.560 Sum_probs=37.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||++|+.|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999888743
No 82
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.00 E-value=1.2e-09 Score=110.53 Aligned_cols=64 Identities=14% Similarity=0.130 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe-CCCc--EEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL-VDGT--RVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~-~~G~--~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.+.+..+.+.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4566777777788999999999999987641334 4776 6887 7999999999998876555553
No 83
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.00 E-value=1.7e-09 Score=114.04 Aligned_cols=42 Identities=38% Similarity=0.491 Sum_probs=39.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 60 (565)
.++||+|||||++||++|..|++.|++|+|||+++.+||.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999999764
No 84
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.00 E-value=2.1e-09 Score=112.75 Aligned_cols=57 Identities=16% Similarity=0.189 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHH-cCcEEEeCcceeEEEe-cCCC------ceeEEEeC---CCc--EEecCEEEECCChHH
Q 038727 272 SVSLAISKAATK-AGAHILVNTEVSQIMI-GDSG------EVDGVLLV---DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~-~~~~------~v~~V~~~---~G~--~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++ .|++|+++++|++|.. ++ + ++.||.+. +|+ ++.|+.||+|++...
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 567778888888 6999999999999998 55 5 78888775 565 689999999998776
No 85
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.00 E-value=4.7e-09 Score=111.27 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC------C---------cEEecCEEEECCChHHHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD------G---------TRVHSSFVLSNATPYKTF 331 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~------G---------~~~~ad~VI~a~~~~~~~ 331 (565)
..+.+.|.+.+++.|++|+++++|++|..++++++++|.+.+ | .+++||.||.|.+.+..+
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 367888888899999999999999999887525677788763 3 579999999999987654
No 86
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.99 E-value=7e-09 Score=110.80 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe---CCCc--EEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL---VDGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~---~~G~--~~~ad~VI~a~~~~~ 329 (565)
..+...|.+.+.+.|++|+.++.|++|..++ +++.||.+ .+|+ .+.|+.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4789999999999999999999999999887 88888876 4575 489999999998876
No 87
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.97 E-value=2.1e-09 Score=111.98 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=47.4
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC---C--cEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD---G--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G--~~~~ad~VI~a~~~~~ 329 (565)
-...+.+.+.+.+++.|++|+++++|++|..++ +.+. |.+.+ | +++.+|.||++++...
T Consensus 237 ~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 237 MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-DGAK-VTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEE-EEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-CEEE-EEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 346788889999999999999999999998876 6554 55542 5 5799999999988654
No 88
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.94 E-value=7.1e-09 Score=96.40 Aligned_cols=56 Identities=11% Similarity=0.157 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHc-CcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKA-GAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++. |++++ +++|++|..++ +++.+|.+.+|++++||.||+|++.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 3455666777776 88998 68999999888 888789999998899999999998753
No 89
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.94 E-value=2.5e-09 Score=108.37 Aligned_cols=60 Identities=5% Similarity=0.096 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~ 335 (565)
.+.+.|.+.++ +++|+++++|++|..++ +++. |++.+|++++||.||.|.+......+.+
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGK-KKWT-LTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECS-SSEE-EEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECC-CEEE-EEECCCcEEecCEEEECCCcchhHHhhc
Confidence 34455555443 36899999999999887 7766 8888998899999999999876544444
No 90
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.93 E-value=3.7e-10 Score=111.69 Aligned_cols=43 Identities=30% Similarity=0.380 Sum_probs=38.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc----CCCCCeeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR----HVIGGAAVT 61 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~----~~~GG~~~t 61 (565)
+++||+|||||++||++|..|+++|++|+|||++ ..+||.+..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 5689999999999999999999999999999994 488997754
No 91
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.92 E-value=1.1e-08 Score=108.39 Aligned_cols=58 Identities=19% Similarity=0.281 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe---CCCc--EEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL---VDGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~---~~G~--~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+.+.|++|+.++.|++|..++ +++.||.+ .+|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 5788999999989999999999999999888 88888876 3565 689999999999876
No 92
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.91 E-value=1e-08 Score=106.86 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CCc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G~--~~~ad~VI~a~~~~~ 329 (565)
...+..+|.+.++++|++|+++++|++|..++ ++.+|++. +|+ +++||.||.|++++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 46789999999999999999999999998865 45667773 565 689999999999986
No 93
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.91 E-value=2.6e-09 Score=108.41 Aligned_cols=56 Identities=20% Similarity=0.306 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCccee---------EEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVS---------QIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~---------~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.|.+.+++.|++|+++++|+ +|..++ +++ +|++.+| ++.||.||+|++.+.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-CeE-EEEECCc-EEECCEEEECCCccH
Confidence 5688999999999999999999999 998777 776 5877777 699999999999885
No 94
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.90 E-value=6.2e-09 Score=100.97 Aligned_cols=41 Identities=32% Similarity=0.471 Sum_probs=37.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG--GLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||++|+.|+++ |++|+|+|++..+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 468999999999999999999997 99999999999888654
No 95
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.90 E-value=9.8e-10 Score=115.26 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCce--eEEEeCCCc-EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEV--DGVLLVDGT-RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v--~~V~~~~G~-~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++++++ ..|++.+|+ ++.||.||++++...
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 356788899999999999999999999987651443 347888887 799999999998654
No 96
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.90 E-value=5.3e-09 Score=103.24 Aligned_cols=41 Identities=32% Similarity=0.532 Sum_probs=37.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
+++||+|||||++||++|..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 45899999999999999999999999999999998887654
No 97
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.90 E-value=9.6e-09 Score=102.18 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.+.+.+++.|++++++++|++|..++ +++.+|.+.+| ++.+|+||+|++...
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 455666677788899999999999999887 66554888888 799999999999765
No 98
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.88 E-value=4.3e-08 Score=105.04 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHc-Cc-EEEeCcceeEEEecCCC---ceeEEEe---CCCc--EEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKA-GA-HILVNTEVSQIMIGDSG---EVDGVLL---VDGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~-G~-~i~~~~~V~~I~~~~~~---~v~~V~~---~~G~--~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++. |+ +|+.++.|++|..++ + +++||.. .+|+ .+.|+.||+|++...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4677778888887 99 999999999999887 7 8888875 4565 589999999998765
No 99
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.87 E-value=1.1e-09 Score=113.03 Aligned_cols=59 Identities=20% Similarity=0.110 Sum_probs=49.8
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
....+.+.+.+.+++.|++|+++++|++|..++ +++. |++.+|+++.+|.||++++...
T Consensus 206 ~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v~-v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 206 MDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-KGAR-VELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CEEE-EEECCCeEEEcCEEEECcCCCc
Confidence 345778888999999999999999999998776 5544 7777888899999999998765
No 100
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.86 E-value=8.7e-09 Score=100.96 Aligned_cols=51 Identities=16% Similarity=0.038 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChH
Q 038727 275 LAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 275 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
+.+.+.+++.|+++++ ++|++|..++ +.+. |.+.+|+++.+|+||++++..
T Consensus 74 ~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~~-v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 74 KVFNKHIEKYEVPVLL-DIVEKIENRG-DEFV-VKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHTTTCCEEE-SCEEEEEEC---CEE-EEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEecC-CEEE-EEECCCCEEEcCEEEECcCCC
Confidence 3344445667888998 9999999887 6655 888888889999999999866
No 101
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.86 E-value=5.1e-08 Score=103.51 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcC-cEEEeCcceeEEEecCCCceeEEEe---CCCc--EEecCEEEECCChHHH
Q 038727 271 GSVSLAISKAATKAG-AHILVNTEVSQIMIGDSGEVDGVLL---VDGT--RVHSSFVLSNATPYKT 330 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~~v~~V~~---~~G~--~~~ad~VI~a~~~~~~ 330 (565)
..+.+.|.+.+.+.| ++|+++++|++|..++ +++.+|.. .+|+ ++.|+.||+|++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 478889999988888 9999999999999888 88877754 5676 6899999999998763
No 102
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.84 E-value=1e-08 Score=104.27 Aligned_cols=62 Identities=8% Similarity=0.078 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHH-cC-cEEEeCcceeEEEecCCCceeEEEeCC---C--cEEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATK-AG-AHILVNTEVSQIMIGDSGEVDGVLLVD---G--TRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~-~G-~~i~~~~~V~~I~~~~~~~v~~V~~~~---G--~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+.+ .| ++|+++++|++|.. + +++. |++.+ | +++.||.||.|.+......+.+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~-~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-R-DGRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E-TTEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-C-CccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 566777777766 36 58999999999988 6 6665 66654 7 57899999999998877666553
No 103
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.84 E-value=1.5e-08 Score=101.16 Aligned_cols=41 Identities=29% Similarity=0.483 Sum_probs=37.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
+++||+|||||++||++|..|++.|++|+|||+++.+||.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 45899999999999999999999999999999998887654
No 104
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.83 E-value=3e-08 Score=95.59 Aligned_cols=41 Identities=32% Similarity=0.561 Sum_probs=37.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG--GLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||+||+.|+++ |++|+|+|+++.+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999988754
No 105
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.83 E-value=1.9e-09 Score=112.56 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..++ +++. |++.+|+++.+|.||++++...
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v~-v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTG-AGVL-VTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECS-SSEE-EEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEEE-EEECCCcEEEcCEEEECCCCCc
Confidence 4678888899999999999999999999876 6654 7788888899999999998775
No 106
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.82 E-value=2.9e-09 Score=110.41 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=51.6
Q ss_pred CchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 268 GGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 268 gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.....+.+.+.+.+++.|++|+++++|++|..++ +++. |++.+|+++.+|.||++++...
T Consensus 199 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 199 FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 3456788899999999999999999999999877 7766 7888898999999999998653
No 107
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.82 E-value=1.2e-09 Score=113.56 Aligned_cols=58 Identities=21% Similarity=0.200 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC---cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG---TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G---~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |++.++ +++.+|.||++++...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-~~~~-v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVT-VKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-SCEE-EEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-CEEE-EEEEeCCCcEEEECCEEEEeeCCcc
Confidence 45678888999999999999999999999877 6655 666654 5799999999998765
No 108
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.81 E-value=2.3e-08 Score=104.48 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHH-cCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATK-AGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++ .|++| ++++|++|..++ +++.+|.+.+|.++.||.||+|++...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 567788888887 48999 588999999988 899999999998999999999999764
No 109
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.81 E-value=9.1e-08 Score=100.93 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHc-CcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 272 SVSLAISKAATKA-GAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 272 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
.+.+.|.+.+++. |++++++ +|++|..++++.+++|++.+|+++.||.||.|.+.+..
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 5788888989998 9999999 99999876425667799999988999999999988763
No 110
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.80 E-value=9.3e-09 Score=101.23 Aligned_cols=41 Identities=37% Similarity=0.549 Sum_probs=37.9
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||+||..|++.|++|+|+|+++.+||.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 34799999999999999999999999999999999888765
No 111
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.80 E-value=2.4e-08 Score=103.76 Aligned_cols=58 Identities=7% Similarity=0.139 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..++ ++...|++.+|+++.+|.||++++...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 5678889999999999999999999998775 444458888998899999999998765
No 112
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.79 E-value=7.9e-08 Score=101.24 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
..+.+.|.+.+++.|++++.+ +|++|..++++.+++|++.+|+++.||.||.|.+.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 467888999999999999999 89999886525566788888988999999999988763
No 113
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.79 E-value=7.3e-09 Score=106.53 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++++++++|++|..++ ++...|++.+|+++.+|.||++++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 4577888888999999999999999998765 443458888998899999999988654
No 114
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.78 E-value=3e-08 Score=103.07 Aligned_cols=59 Identities=15% Similarity=0.049 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecC-CCceeEEEe--C-CC--cEEecCEEEECCChHHH
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGD-SGEVDGVLL--V-DG--TRVHSSFVLSNATPYKT 330 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~-~~~v~~V~~--~-~G--~~~~ad~VI~a~~~~~~ 330 (565)
.+.+.|.+.+++.|++|+++++|++|..++ ++....|.+ . +| .++.||.||.|.+....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 556777788888899999999999998741 133445766 4 56 46899999999987753
No 115
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.77 E-value=4.1e-08 Score=103.49 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC---C--cEEecCEEEECCChHHHHhhcCC
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD---G--TRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G--~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
.+.+.|.+.+++. |+++++|++|..++ ++++ |++.+ | .+++||+||.|.+.+..+.+.++
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~-~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRD-DHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECS-SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeC-CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 4556677777665 99999999999887 7776 65554 6 46999999999998877666654
No 116
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.76 E-value=3.2e-07 Score=94.66 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC-CcEEecCEEEECCChHHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD-GTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~-G~~~~ad~VI~a~~~~~~ 330 (565)
..+.+.|.+.+++.|++|+.+++| +|..++ +++.+|.+.+ +.++.||.||+|++....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 467888888888889999999999 998887 8888877642 224789999999998763
No 117
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.75 E-value=7.3e-08 Score=97.83 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=40.9
Q ss_pred CcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 285 GAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 285 G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
+.+|+++++|+++...++++++ |+++||++++||.||-|-+......+.+.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l~ 173 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGIK-IFFADGSHENVDVLVGADGSNSKVRKQYL 173 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCEE-EEETTSCEEEESEEEECCCTTCHHHHHHS
T ss_pred cceEEEEEEEEeeeEcCCCeEE-EEECCCCEEEeeEEEECCCCCcchHHHhC
Confidence 5679999999999876525555 89999999999999998888876655543
No 118
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.74 E-value=1.7e-08 Score=104.05 Aligned_cols=57 Identities=12% Similarity=0.053 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc-EEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT-RVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~-~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++++++++|++|..++ ++ ..|++.+|+ ++.+|.||++++...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDA-QG-TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE-EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce-EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 4567788888999999999999999998765 55 448888998 899999999988654
No 119
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.74 E-value=1.2e-08 Score=100.03 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC----C--cEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD----G--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~----G--~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..++ +++.+|++.+ | +++.+|.||++++...
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 4567778888888999999999999999877 7877787764 4 4799999999988554
No 120
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.74 E-value=3.8e-09 Score=114.49 Aligned_cols=45 Identities=33% Similarity=0.482 Sum_probs=41.1
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeec
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTE 62 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 62 (565)
..++||+|||||++||+||..|+++|++|+|+|+++.+||.+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~ 433 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQE 433 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeec
Confidence 356899999999999999999999999999999999999987643
No 121
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.74 E-value=4.6e-08 Score=104.94 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCc--EEEeCcceeEEEecCC--C-ceeEEEeC------CC--cEEecCEEEECCChHHHHhhcCCC
Q 038727 272 SVSLAISKAATKAGA--HILVNTEVSQIMIGDS--G-EVDGVLLV------DG--TRVHSSFVLSNATPYKTFMGLVPR 337 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~--~-~v~~V~~~------~G--~~~~ad~VI~a~~~~~~~~~l~~~ 337 (565)
.+.+.|.+.+++.|+ +|+++++|++|..+++ + .+. |++. +| ++++||.||.|.+.+....+.++.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 567788888999987 9999999999988651 1 343 6554 46 478999999999998877777753
No 122
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.73 E-value=6.7e-08 Score=98.66 Aligned_cols=59 Identities=25% Similarity=0.303 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEe--cCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMI--GDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~--~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|.. ++ +++.+|++.+|+++.+|.||++++...
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 356778888889999999999999999987 66 777779999998999999999988653
No 123
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.73 E-value=2.2e-08 Score=103.08 Aligned_cols=57 Identities=7% Similarity=-0.051 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+++| ++.+|.||++++...
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 45788899999999999999999999999777 777 5888877 799999999988654
No 124
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.73 E-value=7.6e-09 Score=107.64 Aligned_cols=58 Identities=14% Similarity=0.238 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..++ ++...|++.+|+++.+|.||++++...
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEECCCcEEEcCEEEECCCCcc
Confidence 4678888899999999999999999998775 444558888998899999999998654
No 125
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.72 E-value=5e-08 Score=102.42 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHH-cCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATK-AGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++ .|++| ++++|++|..++ +++.+|.+.+|.++.||.||+|++.+.
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 567788888888 58999 678999999888 888899999998899999999999865
No 126
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.72 E-value=1.3e-07 Score=84.05 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 273 VSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 273 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
+.+.+.+.+++.|++++++ +|++|..++ +.+. |++++| ++.+|.||+|++...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~~~-v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMG-GVFE-VETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECS-SSEE-EECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CEEE-EEECCC-EEEECEEEECCCCCC
Confidence 3455566678889999999 999999876 6544 888888 799999999998664
No 127
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.72 E-value=2e-09 Score=111.66 Aligned_cols=59 Identities=14% Similarity=0.055 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe-----CCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL-----VDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~-----~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ ++...|++ .+++++.+|.||++++...
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 45678888899999999999999999998876 55223553 4567899999999988654
No 128
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.1e-07 Score=99.02 Aligned_cols=59 Identities=19% Similarity=0.113 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcE-EecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTR-VHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~-~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|..++ ++...|++.+|++ +.+|.||++++...
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceEEEEECCCcEEEECCEEEECCCCCc
Confidence 35678889999999999999999999998765 4434588889987 99999999998665
No 129
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.70 E-value=1.4e-07 Score=100.75 Aligned_cols=57 Identities=11% Similarity=0.166 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHc--CcEEEeCcceeEEEecCCC---ceeEEEe---CCCc--EEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKA--GAHILVNTEVSQIMIGDSG---EVDGVLL---VDGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~--G~~i~~~~~V~~I~~~~~~---~v~~V~~---~~G~--~~~ad~VI~a~~~~~ 329 (565)
.+.+.|.+.+++. |++|+.++.|++|..++ + ++.||.. .+|+ .+.|+.||+|++...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5677888888887 99999999999999987 6 8888865 3454 589999999998765
No 130
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.69 E-value=4.8e-08 Score=102.51 Aligned_cols=56 Identities=13% Similarity=0.245 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHc-CcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKA-GAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.+.+.+++. |++|+ +..|+.|..++ +++.+|.+.+|+++.||.||+|++.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4567777778874 89995 67999999888 888889999998999999999999764
No 131
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.69 E-value=3.2e-09 Score=110.76 Aligned_cols=63 Identities=13% Similarity=0.009 Sum_probs=53.9
Q ss_pred cCCchHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 266 VEGGMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 266 ~~gG~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
+.+-...+.+.+.+.+++.|+++++++.|+++...+ +++. |.+.++.++.+|.|+++++-...
T Consensus 258 L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~~-v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 258 LRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKIL-VEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp STTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEEE-EEETTSCEEEESEEEECSCEEES
T ss_pred ccccchhHHHHHHHHHHhhcceeecceEEEEEEecC-CeEE-EEEcCCCeEEEEEEEEcccccCC
Confidence 445567889999999999999999999999999887 7766 88888888999999999986653
No 132
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.68 E-value=3e-07 Score=96.46 Aligned_cols=58 Identities=14% Similarity=0.278 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHH-cCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 272 SVSLAISKAATK-AGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 272 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
.+.+.|.+.+++ .|++++.+ .|++|..++++.+++|++.+|.++.||.||.|.+.+..
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 577888888888 89999999 59999876525556788888777999999999988764
No 133
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.67 E-value=2.3e-07 Score=97.11 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
..+.+.|.+.+++.|++++.+ +|++|..++++.+++|++.+|++++||.||.|.+.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 367888888888999999999 99999885425667798999988999999999998763
No 134
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.66 E-value=1.7e-07 Score=93.60 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.+.+.+++.|++++++++|++|..++ +.+. |.+.+| ++.+|+||+|++...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD-AYYT-IATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSEE-EEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC-CeEE-EEeCCC-EEEeCEEEECCCCCC
Confidence 345566666788899999999999999876 6555 777777 489999999999764
No 135
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.65 E-value=2.9e-08 Score=105.86 Aligned_cols=55 Identities=7% Similarity=0.093 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
...+.+.+.+.+++.|++|+++++|++|..++ + +|++.+|+++.+|.||++++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCC
Confidence 45678889999999999999999999998665 4 4778889899999999998864
No 136
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.65 E-value=1.6e-08 Score=98.74 Aligned_cols=43 Identities=33% Similarity=0.645 Sum_probs=38.1
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeee
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t 61 (565)
..+|||+|||||++||+||.+|+++|++|+|+|++ .+||.|..
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 35799999999999999999999999999999985 57777643
No 137
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.64 E-value=9.6e-09 Score=104.29 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..+ +++.+|++.+|+++.||.||++++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 467788888899999999999999999865 455679999999999999999998654
No 138
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.63 E-value=1.7e-08 Score=104.86 Aligned_cols=49 Identities=8% Similarity=0.072 Sum_probs=41.5
Q ss_pred HHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 279 KAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 279 ~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
+.++++|++|++++.|++|..+ +++.+|++.+|+++.+|.||++++...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 6678889999999999999855 446668888898899999999998664
No 139
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.62 E-value=7.8e-08 Score=96.70 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+|+++.+|.||++++...
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CEE-EEEECCCCEEECCEEEECcCCCc
Confidence 34678888899999999999999999998776 554 48888998899999999988654
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.62 E-value=2.8e-07 Score=89.67 Aligned_cols=38 Identities=39% Similarity=0.759 Sum_probs=34.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccCCCCCee
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRHVIGGAA 59 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~~~GG~~ 59 (565)
+||+|||||++||+||..|++.|+ +|+|+|++ .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 799999999999999999999999 99999995 566654
No 141
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.60 E-value=2.4e-07 Score=89.46 Aligned_cols=34 Identities=32% Similarity=0.567 Sum_probs=32.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
++||+|||||++||++|..|++.|++|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999965
No 142
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.59 E-value=2e-08 Score=98.67 Aligned_cols=42 Identities=31% Similarity=0.511 Sum_probs=38.2
Q ss_pred CCCCEEEEcCChhHHHHHHHHHH--CCCcEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLAR--GGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~--~G~~V~vlE~~~~~GG~~~ 60 (565)
.++||+|||||++||+||++|++ +|++|+|||+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 35799999999999999999985 5999999999999999874
No 143
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.57 E-value=1.7e-08 Score=103.96 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=50.0
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKT 330 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~ 330 (565)
-...+.+.+.+.+++.|++|+++++|++|..++ +++..|.+ +|+++.+|.||++++....
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 345778889999999999999999999998766 77765665 6778999999999987653
No 144
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.57 E-value=1.8e-07 Score=94.93 Aligned_cols=52 Identities=10% Similarity=0.122 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
..+.+.+.+.+++.|++++++++|++|..+ +|++.+|+++.+|.||++++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCC
Confidence 568888999999999999999999999643 2778899999999999987753
No 145
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.54 E-value=3.4e-07 Score=89.04 Aligned_cols=52 Identities=6% Similarity=0.119 Sum_probs=39.0
Q ss_pred HHHHHHcCcEEEeCcceeEEEecCC-CceeEEEeCCCcEEecCEEEECCChHH
Q 038727 278 SKAATKAGAHILVNTEVSQIMIGDS-GEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 278 ~~~l~~~G~~i~~~~~V~~I~~~~~-~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+++.|++++++++|+.|..+.+ ++...|.+.+|+++.+|+||+|++...
T Consensus 63 ~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 63 KVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 3445667899999999999976531 223448888888899999999998653
No 146
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.54 E-value=5e-08 Score=103.54 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEe-------------------cCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMI-------------------GDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~-------------------~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|+++++++.|++|.. ++ +++. +++.+|+++.+|.||++++...
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLS-LTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEE-EEEcCCCEEEcCEEEECcCCcc
Confidence 356788888889999999999999999987 34 5555 7778888999999999988643
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.53 E-value=1.4e-07 Score=95.54 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|. + + .|++.+|+++.+|.||++++...
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECcCCCc
Confidence 4677888888999999999999999998 4 5 47788998999999999988653
No 148
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.52 E-value=1e-07 Score=99.03 Aligned_cols=57 Identities=12% Similarity=0.200 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|.. + +++..|.+ +|+++.+|.||++++...
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~-~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAG-N-GKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEEC-S-SSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C-CcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 456788888999999999999999999986 4 66655666 667899999999998664
No 149
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.52 E-value=8.3e-08 Score=98.08 Aligned_cols=38 Identities=29% Similarity=0.461 Sum_probs=34.8
Q ss_pred CCEEEEcCChhHHHHHHHHHH--CCCcEEEEcccCCCCCe
Q 038727 21 WDALVIGGGHNGLIAAAYLAR--GGLSVAVLERRHVIGGA 58 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~--~G~~V~vlE~~~~~GG~ 58 (565)
+||+|||||++||+||..|++ .|++|+|+|+++..++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 689999999999999999999 88999999999876653
No 150
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.51 E-value=7.7e-07 Score=93.79 Aligned_cols=73 Identities=18% Similarity=0.239 Sum_probs=51.6
Q ss_pred HHHHHHHHHH-cCcEEEeCcceeEEEecCCCceeEEEeCC---Cc--EE---ecCEEEECCChHHHHhhcCC-CCCCCHH
Q 038727 274 SLAISKAATK-AGAHILVNTEVSQIMIGDSGEVDGVLLVD---GT--RV---HSSFVLSNATPYKTFMGLVP-RDVLPDD 343 (565)
Q Consensus 274 ~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G~--~~---~ad~VI~a~~~~~~~~~l~~-~~~~~~~ 343 (565)
..++.+.+.+ .|++|++++.|++|..++ +++++|++.+ |+ ++ .++.||++++...+ .+|+- ...-|++
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s-p~lL~~sGig~~~ 275 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT-SRILFQSGIGPTD 275 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH-HHHHHHTTBSCHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC-HHHHHHcCCCcHH
Confidence 4455555655 489999999999999988 8999999865 64 33 78999999999875 33432 2223555
Q ss_pred HHHHH
Q 038727 344 FLRAI 348 (565)
Q Consensus 344 ~~~~~ 348 (565)
..+.+
T Consensus 276 ~L~~~ 280 (546)
T 1kdg_A 276 MIQTV 280 (546)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44444
No 151
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.51 E-value=4.5e-08 Score=95.10 Aligned_cols=40 Identities=30% Similarity=0.369 Sum_probs=34.5
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCe
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGA 58 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~ 58 (565)
+++|||+|||||++||+||.+|+++|++|+|+|++. +||.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 357999999999999999999999999999999974 4543
No 152
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.50 E-value=6.4e-07 Score=93.66 Aligned_cols=54 Identities=7% Similarity=0.164 Sum_probs=40.2
Q ss_pred HHHHHHHHcCcEEEeCcceeEEEecCC-CceeEEEeCCCcEEecCEEEECCChHH
Q 038727 276 AISKAATKAGAHILVNTEVSQIMIGDS-GEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 276 ~l~~~l~~~G~~i~~~~~V~~I~~~~~-~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
.+.+.+++.|++++.+++|++|..+.+ +....|.+.+|+++.+|+||+|++...
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 334445677899999999999976420 223448888898899999999999653
No 153
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.49 E-value=2.3e-07 Score=97.52 Aligned_cols=50 Identities=16% Similarity=0.258 Sum_probs=41.1
Q ss_pred cCcEEEeCcceeEEEecCCCceeEEEeCCC---cEEecCEEEECCChHHHHhhcC
Q 038727 284 AGAHILVNTEVSQIMIGDSGEVDGVLLVDG---TRVHSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 284 ~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G---~~~~ad~VI~a~~~~~~~~~l~ 335 (565)
.+.+|++++.|++|..++ +++++|+..+. .++.|+.||++++...+ .+||
T Consensus 224 ~nl~v~~~~~v~~i~~~~-~~a~gv~~~~~~~~~~~~a~~VILsAGai~S-P~LL 276 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG-NQVRSLEVVGRQGSAEVFADQIVLCAGALES-PALL 276 (526)
T ss_dssp TTEEEECSCEEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred CCeEEEeCCEEEEEEecC-CeEEEEEEEecCceEEEeecceEEcccccCC-cchh
Confidence 368999999999999999 99999887543 25788999999999887 4554
No 154
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.48 E-value=5.6e-07 Score=94.49 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=41.8
Q ss_pred HHHcCcEEEeCcceeEEEec----CCCceeEEEeC--CCc--EEecC-EEEECCChHHHHhhcC
Q 038727 281 ATKAGAHILVNTEVSQIMIG----DSGEVDGVLLV--DGT--RVHSS-FVLSNATPYKTFMGLV 335 (565)
Q Consensus 281 l~~~G~~i~~~~~V~~I~~~----~~~~v~~V~~~--~G~--~~~ad-~VI~a~~~~~~~~~l~ 335 (565)
+...+.+|++++.|++|..+ + ++++||++. +|+ ++.|+ .||++++...+ .+||
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~-~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~S-PqLL 298 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTT-PRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVS-PTIL 298 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSS-CEEEEEEEESSTTCEEEEEEEEEEEECSCTTTH-HHHH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCC-CEEEEEEEEecCCcEEEEEECCEEEEeCCccCC-HHHH
Confidence 34558999999999999987 6 889999975 464 56786 59999998876 4443
No 155
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.47 E-value=3.6e-07 Score=95.15 Aligned_cols=61 Identities=20% Similarity=0.174 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHcC-cEEEeCcceeEEEecCC-CceeEEEeC--CC-----cEEecCEEEECCChHHH
Q 038727 270 MGSVSLAISKAATKAG-AHILVNTEVSQIMIGDS-GEVDGVLLV--DG-----TRVHSSFVLSNATPYKT 330 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~-~~v~~V~~~--~G-----~~~~ad~VI~a~~~~~~ 330 (565)
-.+...++.+.++++| ++|++++.|++|..+++ +++++|++. +| .++.|+.||++++...+
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 4344556666667775 89999999999998742 478999885 56 36889999999999865
No 156
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.46 E-value=8.8e-08 Score=93.42 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=32.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.|||+|||||++||+||.+|+++|++|+|+|++..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 49999999999999999999999999999999753
No 157
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.45 E-value=5.4e-08 Score=99.47 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.++++|++++++++|+++..+ .|.+.+|+++.+|.||++++...
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAINGN------EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEETT------EEEETTSCEEECSEEEECCCEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecCC------eeeecCCeEEeeeeEEEEeceec
Confidence 3456778888899999999999999998532 27789999999999999988654
No 158
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.43 E-value=8.8e-07 Score=91.92 Aligned_cols=56 Identities=9% Similarity=0.030 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc----EEecCEEEECCCh
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT----RVHSSFVLSNATP 327 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~----~~~ad~VI~a~~~ 327 (565)
...+.+.+.+.++++|++|+++++|++|..+ +.+..+...+|+ ++.||.||++++.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEK--QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECSS--EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeCC--ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 4678888999999999999999999999643 223334556663 6899999999874
No 159
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=1.3e-07 Score=92.44 Aligned_cols=42 Identities=43% Similarity=0.852 Sum_probs=36.5
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
++.++||+|||||++||+||..|+++|++|+|+|+ ..+||.+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 34568999999999999999999999999999999 4567654
No 160
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.40 E-value=2.1e-07 Score=92.83 Aligned_cols=39 Identities=36% Similarity=0.415 Sum_probs=35.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
.++||+|||||++|+++|+.|+++|++|+|||++...+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 468999999999999999999999999999999875444
No 161
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.33 E-value=2.4e-07 Score=90.88 Aligned_cols=40 Identities=43% Similarity=0.759 Sum_probs=36.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||++|..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4589999999999999999999999999999998 677765
No 162
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.28 E-value=3.5e-07 Score=90.04 Aligned_cols=46 Identities=37% Similarity=0.504 Sum_probs=37.0
Q ss_pred cccccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 13 TRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 13 ~~~~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
|......++||+|||||++||++|..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 7 HDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp ---CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CccccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 3333446789999999999999999999999999999975 566653
No 163
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.28 E-value=1.9e-06 Score=87.84 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC--cEEecCEEEECCChH
Q 038727 269 GMGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG--TRVHSSFVLSNATPY 328 (565)
Q Consensus 269 G~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G--~~~~ad~VI~a~~~~ 328 (565)
+.....+.+.+.++++|+++++++.|++|.. ++++ ++..+| +++.+|.||++++..
T Consensus 198 ~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~---~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 198 GIGASKRLVEDLFAERNIDWIANVAVKAIEP---DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp CSTTHHHHHHHHHHHTTCEEECSCEEEEECS---SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred hhHHHHHHHHHHHHhCCeEEEeCceEEEEeC---CceE-EEeeCCCceEeecceEEEeccCC
Confidence 3445566777788999999999999999853 3333 444444 479999999987643
No 164
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.28 E-value=2.7e-07 Score=90.79 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=32.0
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcc
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLER 51 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~ 51 (565)
+.++||+|||||++||++|..|++.|++|+|+|+
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 3458999999999999999999999999999998
No 165
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.27 E-value=2.6e-07 Score=95.35 Aligned_cols=42 Identities=31% Similarity=0.523 Sum_probs=39.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeee
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVT 61 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t 61 (565)
++||+|||||++||+||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 589999999999999999999999999999999999998754
No 166
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.25 E-value=3e-07 Score=95.56 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CC--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G--~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++. ++|+++++|++|..++ +++. |++. +| +++.+|.||++++...
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE-DAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS-SSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-CEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 457788888888887 9999999999999887 7765 6664 67 6799999999988654
No 167
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.24 E-value=6.3e-07 Score=93.72 Aligned_cols=43 Identities=40% Similarity=0.587 Sum_probs=38.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC--------CCCCeeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH--------VIGGAAVT 61 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~--------~~GG~~~t 61 (565)
.++||+|||||++||+||..|++.|++|+|+|+++ .+||.|..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 46899999999999999999999999999999965 67887644
No 168
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.23 E-value=1.9e-06 Score=89.47 Aligned_cols=45 Identities=20% Similarity=0.098 Sum_probs=35.4
Q ss_pred cccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 15 TLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 15 ~~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
+..++-+||||||+|++||++|+.|.++|...+++|+.+..|+..
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 344566899999999999999999999999888999988877654
No 169
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.22 E-value=5.2e-07 Score=92.05 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=32.1
Q ss_pred ccccccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 12 LTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 12 ~~~~~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.|.++..+++||+|||||++||++|+.|+++|++|+|||++.
T Consensus 14 ~~~~~~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 14 LVPRGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---------CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred eecccCcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 355555566899999999999999999999999999999976
No 170
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.22 E-value=1e-06 Score=90.12 Aligned_cols=42 Identities=38% Similarity=0.470 Sum_probs=39.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 60 (565)
..+||+|||||++||+||+.|+++|++|+|||+++.+||...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 457999999999999999999999999999999999999863
No 171
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.21 E-value=5.4e-07 Score=93.12 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=45.4
Q ss_pred HHHHHHHHHHH-HHcCcEEEeCcceeEEEecCCCceeEEEeC--CC--cEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAA-TKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l-~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G--~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+ ++.|++|+++++|++|..++ +++. |.+. +| +++.+|.||++++...
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-DSVS-LEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-SSEE-EEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-CeEE-EEEEcCCCceEEEECCEEEECCCccc
Confidence 46788888889 99999999999999998876 5544 6655 66 5799999999988664
No 172
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=5.6e-07 Score=87.60 Aligned_cols=42 Identities=40% Similarity=0.692 Sum_probs=37.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEE-EcccCCCCCeeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAV-LERRHVIGGAAVT 61 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~v-lE~~~~~GG~~~t 61 (565)
.++||+|||||++||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 458999999999999999999999999999 999 678887643
No 173
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.21 E-value=7.9e-07 Score=91.26 Aligned_cols=42 Identities=31% Similarity=0.415 Sum_probs=38.9
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~~~GG~~~ 60 (565)
..+||+|||||++||++|..|++.|. +|+|||+++.+||.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 45899999999999999999999999 9999999999998764
No 174
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.21 E-value=4.8e-07 Score=93.77 Aligned_cols=59 Identities=10% Similarity=-0.011 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCc-eeEEEeCC---C----cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGE-VDGVLLVD---G----TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~-v~~V~~~~---G----~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ ++ ...|.+.+ | +++.+|.||++++...
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 45678888899999999999999999998765 43 33466665 2 5789999999988654
No 175
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=9.6e-07 Score=91.32 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CC--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G--~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |.+. +| +++.+|.||++++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG-DGVK-LTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS-SSEE-EEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC-CeEE-EEEEecCCCcceEEECCEEEECCCCCc
Confidence 35678888899999999999999999998766 5543 5554 44 6799999999998765
No 176
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.15 E-value=6.1e-07 Score=88.95 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHHHHhhcCC
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYKTFMGLVP 336 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~~~~~l~~ 336 (565)
..+.++|.+.+++.|++|+. ++|++|..++ .+.||.||+|++.+. ..|++
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s--~~l~~ 191 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWA--GALQR 191 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcCh--HhhcC
Confidence 57889999999999999998 8998875432 167999999999887 46654
No 177
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.15 E-value=1e-06 Score=91.49 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC---Cc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD---GT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G~--~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|+++++++.|++|...+++.+. |++.+ |+ ++.+|.||++++...
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQ-VTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEE-EEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 3567888899999999999999999999875414433 55543 55 478999999988654
No 178
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.15 E-value=7.6e-07 Score=92.19 Aligned_cols=59 Identities=7% Similarity=0.024 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC-cEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG-TRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G-~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..++++++..|++.+| +++.+|.||++++...
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 4678888888999999999999999998764133455888899 7899999999998654
No 179
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.13 E-value=7.5e-07 Score=92.34 Aligned_cols=58 Identities=17% Similarity=0.025 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC----CcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD----GTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~----G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++.+ |+++.+|.||++++...
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-DGV-YVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET-TEE-EEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-CeE-EEEEeccCCCceEEEcCEEEECcCCCc
Confidence 45678888888999999999999999998765 543 477766 77789999999998765
No 180
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.12 E-value=1.4e-06 Score=90.24 Aligned_cols=59 Identities=14% Similarity=0.011 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCc-----EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGT-----RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~-----~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+++ ++.+|.||++++...
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 456788889999999999999999999987651444 37766553 789999999988654
No 181
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.11 E-value=9.4e-07 Score=91.09 Aligned_cols=58 Identities=17% Similarity=0.111 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC-C--Cc--EEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV-D--GT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~-~--G~--~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|..++ +++. |++. + |+ ++.+|.||++++...
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGLH-VRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEE-EEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEEE-EEEeecCCCceeEEEcCEEEECCCccc
Confidence 35678888889999999999999999998776 5544 6665 6 76 799999999988654
No 182
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.11 E-value=1.3e-06 Score=90.19 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..++ +. ..|.+++ .++.+|.||++++...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~-~~v~~~~-~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-GE-FVLTTTH-GELRADKLLVATGRTP 271 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-TE-EEEEETT-EEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CE-EEEEECC-cEEEcCEEEECCCCCc
Confidence 35688899999999999999999999998765 54 3477764 5799999999998765
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=1.1e-06 Score=91.07 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEec-CCCceeEEEeC-----CCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIG-DSGEVDGVLLV-----DGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~-~~~~v~~V~~~-----~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++|+++++|++|..+ + ++...|++. +++++.+|.||++++...
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDD-KNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecC-CCeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 3567888889999999999999999999872 2 333446665 356799999999998765
No 184
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.07 E-value=2.1e-06 Score=88.35 Aligned_cols=41 Identities=17% Similarity=0.291 Sum_probs=38.3
Q ss_pred CCEEEEcCChhHHHHHHHHHH---CCCc---EEEEcccCCCCCeeee
Q 038727 21 WDALVIGGGHNGLIAAAYLAR---GGLS---VAVLERRHVIGGAAVT 61 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~---~G~~---V~vlE~~~~~GG~~~t 61 (565)
+||+|||||++||+||..|++ .|++ |+|||+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 689999999999999999999 9999 9999999999998643
No 185
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.06 E-value=2.3e-06 Score=91.06 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=37.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||+||..|+++|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999998854
No 186
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1.6e-06 Score=89.26 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCC--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G--~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|.. + + +. ++..+| +++.+|.||++++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~-v~-v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G-C-LL-ANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E-EE-EECSSSCCCEECCSCEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C-EE-EEECCCceEEEECCEEEECcCCCc
Confidence 356778888889999999999999999976 5 4 33 554456 5799999999998654
No 187
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.04 E-value=3e-06 Score=84.99 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=33.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARG--GLSVAVLERRHVI 55 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~~~ 55 (565)
.||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998876
No 188
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.02 E-value=2.9e-06 Score=92.28 Aligned_cols=49 Identities=31% Similarity=0.483 Sum_probs=42.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeeeecccCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAVTEELIPG 67 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~G 67 (565)
..+||+|||||++||+||..|+++|++|+|+|+++.+||.+......+|
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg 436 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPG 436 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCC
Confidence 4579999999999999999999999999999999999998754333333
No 189
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.01 E-value=2.4e-06 Score=87.84 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CCcEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|..++ +++. |++. +++++.+|.||++++...
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE-DGVT-VTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CeEE-EEEEeCCceeEEEcCEEEECcCCCc
Confidence 35677888888999999999999999998766 5543 5554 456799999999998765
No 190
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.99 E-value=2.3e-06 Score=88.26 Aligned_cols=58 Identities=31% Similarity=0.327 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC-CC--cEEecCEEEECCChHH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV-DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~-~G--~~~~ad~VI~a~~~~~ 329 (565)
...+.+.+.+.+++.|++++++++|++|..++ +++. |.+. +| +++.+|.||++++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG-SQVT-VTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS-SCEE-EEEESSSCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-CeEE-EEEEcCCceEEEEcCEEEECCCCCc
Confidence 35677888888999999999999999998776 5554 6654 56 5799999999988654
No 191
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.99 E-value=2.6e-06 Score=91.52 Aligned_cols=41 Identities=29% Similarity=0.553 Sum_probs=35.9
Q ss_pred cccCCCCCEEEEcCChhHHHHHHHHHH-----CCCcEEEEcccCCC
Q 038727 15 TLKDKKWDALVIGGGHNGLIAAAYLAR-----GGLSVAVLERRHVI 55 (565)
Q Consensus 15 ~~~~~~~dViIIGaGiaGL~aA~~La~-----~G~~V~vlE~~~~~ 55 (565)
++...++||+|||||++||++|..|++ .|.+|+|||+.+.+
T Consensus 3 ~~~~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 3 KYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp CEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCCCCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 344456899999999999999999999 99999999998653
No 192
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.95 E-value=7.8e-06 Score=79.70 Aligned_cols=39 Identities=33% Similarity=0.255 Sum_probs=35.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
+||+|||||++|+.||+.|+++|++|+|+|++...+.-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999988655443
No 193
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.91 E-value=4e-06 Score=86.47 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=35.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCC-----CcEEEEcccCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGG-----LSVAVLERRHVIG 56 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G-----~~V~vlE~~~~~G 56 (565)
..+||+|||||++||++|..|++.| .+|+|||+++.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999999877
No 194
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.86 E-value=9.3e-06 Score=87.68 Aligned_cols=42 Identities=31% Similarity=0.421 Sum_probs=39.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 60 (565)
.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 468999999999999999999999999999999999999864
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.83 E-value=7.6e-06 Score=91.68 Aligned_cols=41 Identities=39% Similarity=0.597 Sum_probs=39.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCeee
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~~ 60 (565)
++||+|||||++||+||..|++.|++|+|||+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999886
No 196
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.82 E-value=7.1e-06 Score=84.04 Aligned_cols=41 Identities=24% Similarity=0.337 Sum_probs=38.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHH-C------CCcEEEEcccCCCCCeee
Q 038727 20 KWDALVIGGGHNGLIAAAYLAR-G------GLSVAVLERRHVIGGAAV 60 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 60 (565)
.+||+|||||++|++||..|++ . |++|+|||+++.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4799999999999999999999 7 999999999999999873
No 197
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.82 E-value=9.2e-06 Score=83.28 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=38.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCC--CcEEEEcccCCCCCeee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGG--LSVAVLERRHVIGGAAV 60 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 60 (565)
..+||+|||||++|+++|..|++.| ++|+|||+++.+||++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999998 99999999999998763
No 198
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.80 E-value=1.3e-05 Score=90.39 Aligned_cols=40 Identities=25% Similarity=0.570 Sum_probs=38.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccCCCCCee
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRHVIGGAA 59 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~~~GG~~ 59 (565)
.+||+|||||++||+||..|+++|+ +|+|||+++.+||..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 5799999999999999999999999 799999999999976
No 199
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.78 E-value=1.1e-05 Score=85.96 Aligned_cols=35 Identities=40% Similarity=0.576 Sum_probs=32.5
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..++||+|||||++||+||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 35689999999999999999999999999999983
No 200
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.78 E-value=1.4e-05 Score=81.96 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChH
Q 038727 270 MGSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~ 328 (565)
...+.+.+.+.+++. +++++++.|++|..+ +++..+ ..+|+++.+|.||++++..
T Consensus 189 ~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 189 DKEVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp CHHHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEE-EETTEEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEE-EeCCCEEECCEEEEeeCCc
Confidence 346778888888888 999999999999754 344435 4466789999999998865
No 201
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.67 E-value=0.00022 Score=73.25 Aligned_cols=34 Identities=35% Similarity=0.394 Sum_probs=32.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 5799999999999999999999999999999764
No 202
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.64 E-value=1.4e-05 Score=83.61 Aligned_cols=37 Identities=35% Similarity=0.519 Sum_probs=33.9
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
.+||+||||||.+|+++|.+|++ |.+|+|||+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 56999999999999999999999 99999999987543
No 203
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.61 E-value=2.6e-05 Score=81.94 Aligned_cols=51 Identities=22% Similarity=0.351 Sum_probs=40.5
Q ss_pred HcCcEEEeCcceeEEEec--CCCceeEEEeC--CCc--EEec-CEEEECCChHHHHhhcC
Q 038727 283 KAGAHILVNTEVSQIMIG--DSGEVDGVLLV--DGT--RVHS-SFVLSNATPYKTFMGLV 335 (565)
Q Consensus 283 ~~G~~i~~~~~V~~I~~~--~~~~v~~V~~~--~G~--~~~a-d~VI~a~~~~~~~~~l~ 335 (565)
..+.+|++++.|++|..+ + ++++||++. +|+ ++.| +.||++++...+ .+||
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~-~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s-p~lL 275 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEAD-RTCKGVTVVTAAGNELNFFADREVILSQGVFET-PKLL 275 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTT-TEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCC-CEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC-hHHH
Confidence 458999999999999998 6 889999985 354 4677 459999998876 3443
No 204
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0004 Score=71.68 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=32.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+++|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 35799999999999999999999999999999764
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.59 E-value=3.4e-05 Score=79.01 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|.++ |+++.+|.||++++...
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD-KNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES-SCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC-CCEEECCEEEECcCCCC
Confidence 467888888899999999999999999864 445456664 56799999999998654
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.56 E-value=4.1e-05 Score=79.13 Aligned_cols=56 Identities=23% Similarity=0.188 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|.+++ .++.+|.||++++...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 467788888999999999999999999864 4565576654 4799999999998764
No 207
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.53 E-value=5.4e-05 Score=75.65 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=34.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
++.+|+|||||++|++||..|++.+.+|+|+|+++.++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 56889999999999999999977899999999998766
No 208
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.51 E-value=0.00038 Score=71.32 Aligned_cols=36 Identities=33% Similarity=0.374 Sum_probs=32.8
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 367999999999999999999999999999997653
No 209
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.49 E-value=5.8e-05 Score=76.99 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=32.2
Q ss_pred CCEEEEcCChhHHHHHHHHHH---CCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLAR---GGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~---~G~~V~vlE~~~~ 54 (565)
.||+|||||++||+||..|++ .|++|+|+|+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 689999999999999999999 8999999999874
No 210
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.48 E-value=5.4e-05 Score=75.21 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++++++++|++|. . + +|++++|+ +.+|.||++++...
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~g~-i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNSGF-IEGKVKICAIGIVP 234 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETTEE-EECSCEEEECCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECCCE-EEcCEEEECcCCCc
Confidence 4677888888999999999999999996 2 2 37788888 99999999988553
No 211
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.48 E-value=7.7e-05 Score=78.83 Aligned_cols=38 Identities=34% Similarity=0.538 Sum_probs=34.7
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHH-CCCcEEEEcccCCC
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLAR-GGLSVAVLERRHVI 55 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~-~G~~V~vlE~~~~~ 55 (565)
+.++|+||||||.+|+++|.+|++ .|.+|+|||++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 79999999998653
No 212
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.47 E-value=5.4e-05 Score=78.44 Aligned_cols=57 Identities=16% Similarity=0.257 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.++++|++|+++++|++|..++ +++ .|++.+|+++.||.||++++...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECCCCEEECCEEEECCCCCc
Confidence 4567788888999999999999999998766 655 58889999999999999988654
No 213
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.46 E-value=0.00051 Score=70.88 Aligned_cols=36 Identities=33% Similarity=0.383 Sum_probs=32.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 357999999999999999999999999999998753
No 214
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.43 E-value=5.2e-05 Score=79.45 Aligned_cols=36 Identities=36% Similarity=0.479 Sum_probs=33.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHH-CCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLAR-GGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~-~G~~V~vlE~~~~~ 55 (565)
+||+||||||.+|+++|.+|++ .|.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 69999999998765
No 215
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.43 E-value=8.2e-05 Score=78.00 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=44.9
Q ss_pred HHHHHHHHHH-HcCcEEEeCcceeEEEecCCCceeEEEeCC---Cc--EEecC-EEEECCChHHHHhhcC
Q 038727 273 VSLAISKAAT-KAGAHILVNTEVSQIMIGDSGEVDGVLLVD---GT--RVHSS-FVLSNATPYKTFMGLV 335 (565)
Q Consensus 273 l~~~l~~~l~-~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~---G~--~~~ad-~VI~a~~~~~~~~~l~ 335 (565)
...++...+. +.|++|++++.|++|..+++++++||++.+ |+ ++.|+ .||+|++...+ .+|+
T Consensus 210 ~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~s-p~lL 278 (546)
T 2jbv_A 210 SSVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDT-PKLL 278 (546)
T ss_dssp HHHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred HHHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCC-chhh
Confidence 3444444443 468999999999999987436788998754 53 68898 89999998754 3443
No 216
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.38 E-value=0.001 Score=68.32 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=32.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 35799999999999999999999999999999764
No 217
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.36 E-value=0.0015 Score=68.17 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=32.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999875
No 218
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.35 E-value=0.00012 Score=76.15 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHcC-cEEEeCcceeEEEecCCC-ceeEEEeC--CC-----cEEecCEEEECCChHHH
Q 038727 270 MGSVSLAISKAATKAG-AHILVNTEVSQIMIGDSG-EVDGVLLV--DG-----TRVHSSFVLSNATPYKT 330 (565)
Q Consensus 270 ~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~-~v~~V~~~--~G-----~~~~ad~VI~a~~~~~~ 330 (565)
-.+...++...++++| ++|++++.|++|..++++ ++++|++. +| .++.|+.||++++...+
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3344556666666675 999999999999987524 68999885 45 36889999999999876
No 219
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.34 E-value=0.0005 Score=70.99 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=32.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 35799999999999999999999999999999764
No 220
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.33 E-value=0.0013 Score=67.60 Aligned_cols=35 Identities=37% Similarity=0.383 Sum_probs=32.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 35799999999999999999999999999999764
No 221
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.26 E-value=0.00013 Score=73.56 Aligned_cols=51 Identities=6% Similarity=-0.061 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCCh
Q 038727 275 LAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATP 327 (565)
Q Consensus 275 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~ 327 (565)
+.+.+.+++.|++++++++|+.+..+. +... |++.+|+++.+|.||++++.
T Consensus 206 ~~~~~~l~~~gi~v~~~~~v~~v~~~~-~~~~-v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 206 RLYGFGTENALIEWHPGPDAAVVKTDT-EAMT-VETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp HHSCTTSTTCSEEEECTTTTCEEEEET-TTTE-EEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHhcCcEEEeCceEEEEEecc-cceE-EEcCCCcEEEeeEEEEecCc
Confidence 333344567899999999999998776 5444 88999999999999997664
No 222
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.22 E-value=0.0016 Score=67.17 Aligned_cols=36 Identities=36% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
...+|+|||+|..|+-+|..|++.|.+|+|+|+.+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 346799999999999999999999999999999764
No 223
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.21 E-value=0.00098 Score=68.55 Aligned_cols=35 Identities=31% Similarity=0.310 Sum_probs=32.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 35799999999999999999999999999999764
No 224
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.17 E-value=0.0025 Score=65.91 Aligned_cols=36 Identities=31% Similarity=0.336 Sum_probs=32.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 357999999999999999999999999999998753
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.16 E-value=0.0028 Score=65.06 Aligned_cols=35 Identities=34% Similarity=0.295 Sum_probs=32.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 35799999999999999999999999999999764
No 226
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.14 E-value=0.0034 Score=65.60 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=32.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 5799999999999999999999999999999875
No 227
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.92 E-value=0.0065 Score=62.52 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 5799999999999999999999999999999754
No 228
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.76 E-value=0.016 Score=59.20 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=31.8
Q ss_pred CCCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARG--GLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~~ 54 (565)
..+|+|||+|.+|+-+|..|++. |.+|+++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 45799999999999999999999 899999999764
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.65 E-value=0.014 Score=60.12 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..+++|||+|..|+-.|..|++.|.+|+|+|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 347999999999999999999999999999874
No 230
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.08 E-value=0.00031 Score=61.70 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhC-CCCCCcEeEE-EeCChhhHHHHcCCCCCccccccCCccccccCCCCCCCCCCCCCCCCeEEcCC
Q 038727 459 ESYAQKCFSLIDEYA-PGFSSSVIGY-DLLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPVKGWSGYRTPVRGLYLCGS 536 (565)
Q Consensus 459 ~~~~~~~~~~l~~~~-P~~~~~i~~~-~~~tp~t~~~~~~~~~G~~~g~~~~~~~~~~~rp~~~~~~~~t~i~~lylaG~ 536 (565)
+++.+.+++.|.++| |++ +.++.. .+. .+|.+. ....|+.-.. .+.+....++ ..+.|..+|||||+
T Consensus 57 ~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~--~~W~~d-p~~~Ga~s~~--~pg~~~~~~~-----~l~~p~grl~FAGe 125 (181)
T 2e1m_C 57 AERYGYALENLQSVHGRRI-EVFYTGAGQT--QSWLRD-PYACGEAAVY--TPHQMTAFHL-----DVVRPEGPVYFAGE 125 (181)
T ss_dssp TTTHHHHHHHHHHHHCGGG-GGTEEEEEEE--EESSSC-TTTSSSEECC--CTTHHHHHHH-----HHHSCBTTEEECSG
T ss_pred HHHHHHHHHHHHHHhCCCc-HhhccCccee--cccCCC-CCCCCcccCc--CCCchHHHHH-----HHhCCCCcEEEEEH
Confidence 577788999999988 766 333211 011 235443 2333432111 1111111112 23456789999999
Q ss_pred CCCCCC-CccCc--chHHHHHHHHHHhhh
Q 038727 537 GSHPGG-GVMGA--PGRNAAHVVLQDFKK 562 (565)
Q Consensus 537 ~~~~g~-g~~~a--sg~~aa~~i~~~~~~ 562 (565)
.+.... .+.|| ||.+||++|++.++.
T Consensus 126 ~ts~~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 126 HVSLKHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp GGTTSTTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred HHcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 985322 45677 999999999987754
No 231
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.78 E-value=0.013 Score=48.86 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=32.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+.+|+|||.|-.|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999975
No 232
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.77 E-value=0.0082 Score=61.13 Aligned_cols=39 Identities=31% Similarity=0.376 Sum_probs=35.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
...+|+|||+|.+|+.+|..|++.|.+|+|+|+.+++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 346899999999999999999999999999999886544
No 233
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.75 E-value=0.0074 Score=60.06 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=34.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 5799999999999999999999999999999886544
No 234
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.72 E-value=0.013 Score=47.79 Aligned_cols=52 Identities=10% Similarity=0.032 Sum_probs=44.6
Q ss_pred cEEecCEEEECCChHHHHhhcCCCCCCCHHHHHHHhhcCCCCceEEEEEecCCC
Q 038727 314 TRVHSSFVLSNATPYKTFMGLVPRDVLPDDFLRAIKYSDYHSGVTKINVAVDKL 367 (565)
Q Consensus 314 ~~~~ad~VI~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 367 (565)
++++||+||+|+++.. +..+...+.+|....++++++.+ .+..|+++.++++
T Consensus 4 ~~~~Ad~VIvTvP~~v-L~~I~F~P~LP~~k~~Ai~~l~~-g~~~Kv~l~f~~~ 55 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSS-LRFVKVTPPFSYKKRRAVIETHY-DQATKVLLEFSRR 55 (130)
T ss_dssp EEEEESEEEECSCHHH-HTTSEEESCCCHHHHHHHHHCCE-ECEEEEEEEESSC
T ss_pred eEEEcCEEEEcCCHHH-HhcCcCCCCCCHHHHHHHHhCCC-cceeEEEEEECCC
Confidence 3689999999999887 46766566799999999999998 4889999999886
No 235
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.70 E-value=0.0097 Score=50.63 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=31.8
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|+|||+|..|+..|..|.+.|++|++++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34579999999999999999999999999999864
No 236
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.49 E-value=0.012 Score=48.80 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|||+|..|...|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999853
No 237
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.41 E-value=0.017 Score=48.12 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=30.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 238
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.36 E-value=0.0098 Score=57.23 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=31.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 4799999999999999999999999999999764
No 239
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.32 E-value=0.011 Score=60.35 Aligned_cols=37 Identities=32% Similarity=0.379 Sum_probs=33.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 207 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL 207 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 3579999999999999999999999999999988754
No 240
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.29 E-value=0.014 Score=55.90 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
-+|+|||||..|...|..++.+|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 241
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.26 E-value=0.015 Score=57.49 Aligned_cols=37 Identities=38% Similarity=0.591 Sum_probs=33.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 5799999999999999999999999999999886544
No 242
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.20 E-value=0.017 Score=55.26 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 243
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.19 E-value=0.014 Score=59.48 Aligned_cols=35 Identities=37% Similarity=0.405 Sum_probs=32.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 57999999999999999999999999999998764
No 244
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.17 E-value=0.026 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999963
No 245
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.16 E-value=0.017 Score=58.83 Aligned_cols=34 Identities=32% Similarity=0.349 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999999999999999965
No 246
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.13 E-value=0.017 Score=46.26 Aligned_cols=33 Identities=33% Similarity=0.579 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC-CcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG-LSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~ 53 (565)
.+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 9999999863
No 247
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.12 E-value=0.017 Score=57.51 Aligned_cols=38 Identities=26% Similarity=0.328 Sum_probs=34.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
..+++|||+|..|+.+|..|++.|.+|+|+|+.+++..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 45799999999999999999999999999999876543
No 248
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.10 E-value=0.019 Score=56.12 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=32.5
Q ss_pred ccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 16 LKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 16 ~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
|.....+|.|||+|.-|.+.|..|+++|++|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34445689999999999999999999999999999853
No 249
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.10 E-value=0.017 Score=55.59 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|.+.|..|+++|++|+++++++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 250
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.94 E-value=0.047 Score=56.20 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=34.2
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccCCCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG--GLSVAVLERRHVIG 56 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~~~G 56 (565)
.++||+|||||++|++||..|+++ |.+|+|+|+++.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 358999999999999999999887 89999999998765
No 251
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.83 E-value=0.021 Score=58.14 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=33.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 3579999999999999999999999999999987643
No 252
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.68 E-value=0.022 Score=54.63 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=31.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3579999999999999999999999999999753
No 253
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.59 E-value=0.027 Score=56.42 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=34.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 35799999999999999999999999999999886543
No 254
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.50 E-value=0.028 Score=57.43 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=33.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 579999999999999999999999999999987643
No 255
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.42 E-value=0.038 Score=45.86 Aligned_cols=33 Identities=27% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998853
No 256
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.34 E-value=0.037 Score=48.40 Aligned_cols=34 Identities=26% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~ 53 (565)
..+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 257
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.28 E-value=0.056 Score=54.40 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|.|||+|..|...|..|+++|++|+++|.+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999999753
No 258
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.23 E-value=0.031 Score=56.57 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=33.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCe
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGA 58 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~ 58 (565)
.+|.|||.|.+|+++|..|+++|++|+++|.....-|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~ 43 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL 43 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh
Confidence 46999999999999999999999999999998765443
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.23 E-value=0.037 Score=53.37 Aligned_cols=33 Identities=39% Similarity=0.550 Sum_probs=31.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|.-|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999865
No 260
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.22 E-value=0.039 Score=53.02 Aligned_cols=33 Identities=36% Similarity=0.512 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|--|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 261
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.18 E-value=0.038 Score=56.59 Aligned_cols=37 Identities=30% Similarity=0.370 Sum_probs=33.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 5799999999999999999999999999999886543
No 262
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.18 E-value=0.035 Score=57.17 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=33.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++-
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 230 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL 230 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh
Confidence 3579999999999999999999999999999987654
No 263
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.08 E-value=0.039 Score=49.88 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=30.3
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 264
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.08 E-value=0.047 Score=51.58 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 469999999999999999999999999999864
No 265
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.07 E-value=0.04 Score=55.67 Aligned_cols=37 Identities=30% Similarity=0.381 Sum_probs=33.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 3579999999999999999999999999999987654
No 266
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.93 E-value=0.045 Score=51.72 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+.+|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3568999999999999999999 999999999864
No 267
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.92 E-value=0.044 Score=54.92 Aligned_cols=37 Identities=32% Similarity=0.387 Sum_probs=33.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4579999999999999999999999999999987643
No 268
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.88 E-value=0.048 Score=52.12 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=31.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 44679999999999999999999999999998864
No 269
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.82 E-value=0.05 Score=52.61 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
+..+|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 999999874
No 270
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.69 E-value=0.046 Score=53.73 Aligned_cols=33 Identities=33% Similarity=0.461 Sum_probs=29.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|||+|.+|+-+|..|++.|.+|+++|+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 479999999999999999999999999999865
No 271
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.69 E-value=0.057 Score=51.78 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999875
No 272
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.65 E-value=0.037 Score=57.17 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.3
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..++|+||||+|.+|+++|.+|++.|.+|+|+|++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3569999999999999999999999999999999864
No 273
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.60 E-value=0.067 Score=47.95 Aligned_cols=35 Identities=14% Similarity=0.229 Sum_probs=31.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998764
No 274
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.58 E-value=0.038 Score=56.07 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=33.0
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHC-CC-cEEEEcccCC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARG-GL-SVAVLERRHV 54 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~-G~-~V~vlE~~~~ 54 (565)
+..+|.|||+|..|+..|..|+++ |+ +|++++++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999999865
No 275
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.56 E-value=0.058 Score=54.79 Aligned_cols=37 Identities=27% Similarity=0.383 Sum_probs=33.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 185 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR 185 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 4799999999999999999999999999999876543
No 276
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.56 E-value=0.053 Score=51.88 Aligned_cols=34 Identities=32% Similarity=0.481 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4679999999999999999999999999999865
No 277
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.56 E-value=0.056 Score=55.18 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.52 E-value=0.048 Score=55.20 Aligned_cols=36 Identities=28% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
.+++|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 479999999999999999999999999999987653
No 279
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.52 E-value=0.05 Score=56.13 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=33.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 3579999999999999999999999999999987643
No 280
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.51 E-value=0.05 Score=51.74 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|--|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999873
No 281
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.50 E-value=0.062 Score=50.89 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=30.2
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|..|...|..|+++|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 59999999999999999999999999999875
No 282
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.41 E-value=0.057 Score=51.37 Aligned_cols=35 Identities=23% Similarity=0.118 Sum_probs=32.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
+.+|.|||.|..|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46799999999999999999999999999998763
No 283
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.37 E-value=0.063 Score=54.33 Aligned_cols=33 Identities=30% Similarity=0.458 Sum_probs=31.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 284
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.37 E-value=0.077 Score=51.27 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCCEEEEcCChhHHH-HHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLI-AAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~-aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|-+|++ +|..|.++|++|++.|++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 357999999999997 7788899999999999975
No 285
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.31 E-value=0.057 Score=51.59 Aligned_cols=34 Identities=38% Similarity=0.320 Sum_probs=31.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 4799999999999999999999999999998753
No 286
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.25 E-value=0.081 Score=53.94 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 287
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.23 E-value=0.085 Score=51.18 Aligned_cols=32 Identities=31% Similarity=0.373 Sum_probs=30.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|.|||+|..|.+.|..|+++|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999874
No 288
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.22 E-value=0.068 Score=54.52 Aligned_cols=36 Identities=11% Similarity=0.010 Sum_probs=32.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 357999999999999999999999999999998764
No 289
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.19 E-value=0.043 Score=54.09 Aligned_cols=31 Identities=29% Similarity=0.335 Sum_probs=29.5
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+|.|||+|..|.+.|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 290
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.17 E-value=0.061 Score=54.67 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=33.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 3579999999999999999999999999999987643
No 291
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.10 E-value=0.09 Score=50.27 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=31.2
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
+..+|+|||+|..|.+.|+.|+..|+ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34579999999999999999999999 99999986
No 292
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.10 E-value=0.073 Score=51.06 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=30.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|.|||+|..|...|..|+++|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 46999999999999999999999999999885
No 293
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.10 E-value=0.074 Score=53.14 Aligned_cols=38 Identities=37% Similarity=0.371 Sum_probs=34.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 35799999999999999999999999999999876543
No 294
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.09 E-value=0.072 Score=53.45 Aligned_cols=38 Identities=42% Similarity=0.499 Sum_probs=34.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGG 57 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG 57 (565)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 46799999999999999999999999999999886543
No 295
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.08 E-value=0.086 Score=51.93 Aligned_cols=35 Identities=31% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 44679999999999999999999999999999875
No 296
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.00 E-value=0.17 Score=48.40 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=42.1
Q ss_pred HHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CCc--EEecCEEEECCChHH
Q 038727 276 AISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DGT--RVHSSFVLSNATPYK 329 (565)
Q Consensus 276 ~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G~--~~~ad~VI~a~~~~~ 329 (565)
.+.+.+.+.|++++++++|++|..++ +++.+|++. +|+ ++.+|.||++++...
T Consensus 195 ~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 195 AYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred HHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 45556678899999999999999876 767677775 665 689999999887543
No 297
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.97 E-value=0.12 Score=49.40 Aligned_cols=34 Identities=38% Similarity=0.508 Sum_probs=31.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999998864
No 298
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.95 E-value=0.083 Score=53.20 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=32.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..++.|||.|.-|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 299
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.94 E-value=0.11 Score=49.98 Aligned_cols=34 Identities=24% Similarity=0.182 Sum_probs=31.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999998864
No 300
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.84 E-value=0.087 Score=51.11 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=30.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..+|.|||+|..|.+.|..|+++|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999885
No 301
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.78 E-value=0.056 Score=51.93 Aligned_cols=32 Identities=34% Similarity=0.325 Sum_probs=29.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHC-----C-CcEEEEcc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARG-----G-LSVAVLER 51 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~-----G-~~V~vlE~ 51 (565)
+.+|.|||+|..|...|..|+++ | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35799999999999999999999 9 99999987
No 302
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.73 E-value=0.072 Score=54.81 Aligned_cols=37 Identities=35% Similarity=0.380 Sum_probs=33.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 234 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL 234 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc
Confidence 3579999999999999999999999999999987653
No 303
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.71 E-value=0.082 Score=55.47 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 47999999999999999999999999999998754
No 304
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.71 E-value=0.096 Score=50.45 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34589999999999999999999999999999864
No 305
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.67 E-value=0.12 Score=52.85 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 35799999999999999999999999999999764
No 306
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.65 E-value=0.15 Score=48.61 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=40.4
Q ss_pred HHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CCc--EEecCEEEECCChH
Q 038727 279 KAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DGT--RVHSSFVLSNATPY 328 (565)
Q Consensus 279 ~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G~--~~~ad~VI~a~~~~ 328 (565)
+.+++.|++++++++|++|..++ +++.+|++. +|+ ++.+|.||++++..
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK-MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET-TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 33467899999999999999887 787777776 775 78999999988754
No 307
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.64 E-value=0.075 Score=51.21 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=31.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3579999999999999999999999999999865
No 308
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.60 E-value=0.076 Score=50.96 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=32.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 357999999999999999999999999999998754
No 309
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.59 E-value=0.12 Score=55.65 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 310
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.56 E-value=0.15 Score=49.82 Aligned_cols=57 Identities=21% Similarity=0.225 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC--CC--cEEecCEEEECCChHH
Q 038727 272 SVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV--DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 272 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~--~G--~~~~ad~VI~a~~~~~ 329 (565)
.+.+.+.+.+++.|++++++++|++|..++ +++.+|++. +| +++.+|.||++++...
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 456777777888899999999999999887 777667774 77 5789999999988543
No 311
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.56 E-value=0.1 Score=50.24 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
.+|+|||+|-.|.+.|..|++.|+ +|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 579999999999999999999999 999999863
No 312
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.56 E-value=0.1 Score=47.98 Aligned_cols=35 Identities=29% Similarity=0.287 Sum_probs=31.3
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34679999999999999999999999999998864
No 313
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.54 E-value=0.079 Score=51.34 Aligned_cols=34 Identities=38% Similarity=0.590 Sum_probs=31.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+-.|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4579999999999999999999999999999865
No 314
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.53 E-value=0.088 Score=53.40 Aligned_cols=36 Identities=14% Similarity=-0.078 Sum_probs=32.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCc-EEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLS-VAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~-V~vlE~~~~~ 55 (565)
..+|+|||+|.+|+-+|..|++.|.+ |+|+++.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 35799999999999999999999999 9999998754
No 315
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.52 E-value=0.1 Score=50.23 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 579999999999999999999998 999999864
No 316
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.49 E-value=0.099 Score=49.99 Aligned_cols=32 Identities=41% Similarity=0.584 Sum_probs=29.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|||+|--|.+.|..|+ +|++|+++.+++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999863
No 317
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.46 E-value=0.096 Score=53.20 Aligned_cols=37 Identities=27% Similarity=0.308 Sum_probs=33.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 3579999999999999999999999999999987643
No 318
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.45 E-value=0.1 Score=51.08 Aligned_cols=32 Identities=38% Similarity=0.374 Sum_probs=30.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|.|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999875
No 319
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.43 E-value=0.12 Score=49.87 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||||..|.+.|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999999 999999874
No 320
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.37 E-value=0.21 Score=51.09 Aligned_cols=44 Identities=36% Similarity=0.560 Sum_probs=37.2
Q ss_pred CCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC---------CCCCeeee
Q 038727 18 DKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH---------VIGGAAVT 61 (565)
Q Consensus 18 ~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~---------~~GG~~~t 61 (565)
..+|||+|||||++|++||..|+++|++|+|+|++. .+||.|..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~ 59 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVN 59 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecc
Confidence 356999999999999999999999999999999532 36777643
No 321
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.36 E-value=0.087 Score=53.55 Aligned_cols=33 Identities=33% Similarity=0.294 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 322
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.35 E-value=0.071 Score=49.64 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=31.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+...|+|||+|-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34579999999999999999999999999998754
No 323
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.35 E-value=0.11 Score=49.19 Aligned_cols=33 Identities=30% Similarity=0.290 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 324
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.34 E-value=0.081 Score=55.18 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=32.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999874
No 325
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.33 E-value=0.12 Score=46.46 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=31.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
....|+|||||-.|...|..|.+.|.+|+|++...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34579999999999999999999999999997653
No 326
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.32 E-value=0.11 Score=50.65 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=31.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999999864
No 327
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.30 E-value=0.11 Score=50.04 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=29.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
...+|.|||+|.-|.+.|..|+++|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4467999999999999999999999999999 64
No 328
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=92.28 E-value=0.11 Score=55.05 Aligned_cols=32 Identities=38% Similarity=0.409 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999985
No 329
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.27 E-value=0.3 Score=47.04 Aligned_cols=57 Identities=14% Similarity=0.056 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeC---CC--cEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLV---DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~---~G--~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|+++++++.|++|..+ +++.+|++. +| +++.+|.||++++...
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 356677888888889999999999999874 555567765 67 5799999999988654
No 330
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.22 E-value=0.099 Score=51.03 Aligned_cols=35 Identities=37% Similarity=0.343 Sum_probs=31.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999863
No 331
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.21 E-value=0.09 Score=54.11 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=32.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHC---CCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARG---GLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~---G~~V~vlE~~~~~G 56 (565)
.+++|||+|..|+-+|..|++. |.+|+|+|+.+++-
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 5799999999999999999999 99999999987643
No 332
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.13 E-value=0.12 Score=53.69 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=33.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
.+++|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 679999999999999999999999999999987644
No 333
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.12 E-value=0.14 Score=49.17 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
+..+|+|||+|-.|.+.|+.|+..|. +|+++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999987 899999864
No 334
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.09 E-value=0.15 Score=52.80 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+++|||||..|+=.|..+++.|.+|+|+++..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 3579999999999999999999999999998754
No 335
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.07 E-value=0.043 Score=51.22 Aligned_cols=38 Identities=32% Similarity=0.588 Sum_probs=31.2
Q ss_pred CCCCCCeEEcCCCCCCCCCccCc--chHHHHHHHHHHhhhh
Q 038727 525 RTPVRGLYLCGSGSHPGGGVMGA--PGRNAAHVVLQDFKKQ 563 (565)
Q Consensus 525 ~t~i~~lylaG~~~~~g~g~~~a--sg~~aa~~i~~~~~~~ 563 (565)
.++.+|+|+|||++. |.|+.+| ||+.||++|++.|...
T Consensus 291 ~~~~~~v~l~GDa~~-g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 291 SDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp EETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCEEEEecccC-CcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 456789999999974 5688776 9999999999998653
No 336
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.06 E-value=0.11 Score=49.09 Aligned_cols=33 Identities=33% Similarity=0.299 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999875
No 337
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.03 E-value=0.2 Score=51.62 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=33.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+++|||+|..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3579999999999999999999999999999987654
No 338
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.02 E-value=0.098 Score=53.76 Aligned_cols=36 Identities=28% Similarity=0.249 Sum_probs=33.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHC---CCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARG---GLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~---G~~V~vlE~~~~~G 56 (565)
.+++|||+|..|+-+|..|++. |.+|+|+|+.+++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 5799999999999999999999 99999999987643
No 339
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.98 E-value=0.11 Score=52.37 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=30.0
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|-.|+..|..|+++|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999863
No 340
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.96 E-value=0.16 Score=45.67 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998853
No 341
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.90 E-value=0.12 Score=52.83 Aligned_cols=36 Identities=36% Similarity=0.314 Sum_probs=33.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 357999999999999999999999999999998754
No 342
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.88 E-value=0.057 Score=48.88 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=30.9
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
...+|.|||+|..|.+.|..|+++|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3457999999999999999999999999999875
No 343
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.86 E-value=0.12 Score=50.42 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=32.2
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
...+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45689999999999999999999998 999999974
No 344
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.82 E-value=0.14 Score=48.89 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=29.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 999999864
No 345
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.81 E-value=0.12 Score=51.50 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=30.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4589999999999999999998 99999999864
No 346
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.11 Score=49.78 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCC-CcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGG-LSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~ 53 (565)
..+|.|||.|..|...|..|+++| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999875
No 347
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.13 Score=46.48 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=29.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEE-EcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAV-LERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~v-lE~~~ 53 (565)
.+|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999998 77753
No 348
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.73 E-value=0.19 Score=48.67 Aligned_cols=35 Identities=20% Similarity=0.064 Sum_probs=31.6
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|.|||.|..|-+.|..|+++|++|++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999864
No 349
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.71 E-value=0.14 Score=48.78 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999998863
No 350
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.62 E-value=0.17 Score=48.54 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 351
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.59 E-value=0.14 Score=54.04 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 3579999999999999999999999999999987543
No 352
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.58 E-value=0.12 Score=49.48 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
..+|.|||.|..|...|..|+++|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4579999999999999999999999 99999996
No 353
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=91.52 E-value=0.18 Score=52.21 Aligned_cols=32 Identities=38% Similarity=0.478 Sum_probs=30.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+++|||+|..|+-.|..|++.|.+|+|+|+.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 354
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.50 E-value=0.12 Score=49.95 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=28.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcc
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLER 51 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~ 51 (565)
+|.|||+|..|.+.|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999998
No 355
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.47 E-value=0.14 Score=52.36 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=30.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARG--GLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~ 53 (565)
.+|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 79999999753
No 356
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.40 E-value=0.12 Score=53.60 Aligned_cols=33 Identities=39% Similarity=0.349 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|||+|.+|+-+|..|++.|.+|+++|+.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 579999999999999999999999999999865
No 357
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.39 E-value=0.16 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...|+|.|| |.-|...+..|+++|++|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 346999998 9999999999999999999998864
No 358
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=91.28 E-value=0.18 Score=51.17 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=30.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
..+|+|||||..|+-+|..|.+.|. +|+|+++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 3579999999999999999999997 499998865
No 359
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.21 E-value=0.17 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
...+|+|||+|..|.+.|+.|+..|+ +|+++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34579999999999999999999987 89999985
No 360
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.19 E-value=0.24 Score=47.05 Aligned_cols=33 Identities=27% Similarity=0.563 Sum_probs=30.7
Q ss_pred CCEEEEc-CChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIG-GGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIG-aGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999998865
No 361
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.15 E-value=0.22 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=31.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 362
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.07 E-value=0.22 Score=47.02 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.5
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999998753
No 363
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.05 E-value=0.21 Score=49.85 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=31.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+.+|||||.|-.|...|..|.+.|++|+|+|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3569999999999999999999999999999975
No 364
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.03 E-value=0.08 Score=53.74 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.++|+|+|+|--|.+.|..|...|++|+|+|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999975
No 365
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.01 E-value=0.16 Score=48.27 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=27.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.+||-|..|...|..|.++|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999865
No 366
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.98 E-value=0.087 Score=52.04 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=31.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC-------CcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG-------LSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G-------~~V~vlE~~~~ 54 (565)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998754
No 367
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.98 E-value=0.29 Score=48.28 Aligned_cols=42 Identities=24% Similarity=0.217 Sum_probs=34.9
Q ss_pred cccccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 13 TRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 13 ~~~~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
|..+......|.|||+|-.|...|..+.+.|++|++++.++.
T Consensus 5 ~~~~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 5 NFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp SCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred ccccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 344444556799999999999999999999999999987654
No 368
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.97 E-value=0.19 Score=48.02 Aligned_cols=32 Identities=28% Similarity=0.347 Sum_probs=29.5
Q ss_pred CEEEEcCChhHHHHHHHHHHC--CCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARG--GLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~ 53 (565)
+|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999995 79999999974
No 369
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.90 E-value=0.17 Score=49.24 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
...+|+|+|||-+|..+|..|...|. +|+|++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999998 79999997
No 370
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.88 E-value=0.21 Score=49.99 Aligned_cols=35 Identities=23% Similarity=0.145 Sum_probs=31.9
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+..+|.|||.|-.||..|..|+++|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45689999999999999999999999999999764
No 371
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.82 E-value=0.22 Score=47.62 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.2
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||+|-.|.+.|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999864
No 372
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.69 E-value=0.25 Score=50.53 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=31.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 373
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.69 E-value=0.19 Score=48.06 Aligned_cols=35 Identities=31% Similarity=0.418 Sum_probs=32.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 45799999999999999999999999999998754
No 374
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.67 E-value=0.23 Score=47.77 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC----CcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG----LSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G----~~V~vlE~~~ 53 (565)
.+|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 8999999865
No 375
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.66 E-value=0.17 Score=51.72 Aligned_cols=37 Identities=35% Similarity=0.443 Sum_probs=33.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccCCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRHVIG 56 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~~~G 56 (565)
..+|+|||+|..|+-+|..|++. |.+|+++|+.+++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 35799999999999999999999 99999999987543
No 376
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.65 E-value=0.19 Score=44.86 Aligned_cols=31 Identities=32% Similarity=0.326 Sum_probs=29.0
Q ss_pred CEEEEc-CChhHHHHHHHHHHCCCcEEEEccc
Q 038727 22 DALVIG-GGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 22 dViIIG-aGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+|+||| +|..|...|..|++.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999 9999999999999999999999875
No 377
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.59 E-value=0.19 Score=50.00 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999853
No 378
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.59 E-value=0.26 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
.+|.|||.|..|.+.|..|+++|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999864
No 379
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.56 E-value=0.25 Score=47.38 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 579999999999999999999999 999999865
No 380
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.48 E-value=0.078 Score=44.20 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|...|..|++.|.+|+|++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999998863
No 381
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.33 E-value=0.28 Score=48.58 Aligned_cols=43 Identities=23% Similarity=0.207 Sum_probs=34.5
Q ss_pred ccccccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 12 LTRTLKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 12 ~~~~~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.|+.+......|+|||+|..|...|..+.+.|++|++++.+..
T Consensus 6 ~m~~~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 6 DMTRIILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp -CCCCCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred cccccCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3444333445799999999999999999999999999987653
No 382
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.32 E-value=0.22 Score=51.00 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=33.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+++|||+|..|+-.|..|++.|.+|+++|+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 457999999999999999999999999999998754
No 383
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.31 E-value=0.22 Score=50.63 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=33.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVI 55 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~ 55 (565)
..+++|||+|..|+-.|..|++.|.+|+++|+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 457999999999999999999999999999998754
No 384
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.26 E-value=0.16 Score=50.52 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=28.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 59999999999999999999 99999999864
No 385
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.23 E-value=0.27 Score=46.54 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=29.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998864
No 386
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.12 E-value=0.27 Score=48.16 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||||..|..+|..+.+.|++|++++.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4699999999999999999999999999998764
No 387
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.09 E-value=0.25 Score=46.94 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998753
No 388
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.08 E-value=0.21 Score=48.03 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=29.7
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
+|+|||+|-.|.+.|..|++.|+ +|++++++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999863
No 389
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.06 E-value=0.56 Score=45.04 Aligned_cols=55 Identities=13% Similarity=0.202 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCCCcEEecCEEEECCChHH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVDGTRVHSSFVLSNATPYK 329 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~G~~~~ad~VI~a~~~~~ 329 (565)
..+.+.+.+.+++.|++++.++ |++|..++ +.+. |.+ +|+++.+|+||+|++...
T Consensus 70 ~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~-~~~~-v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 70 VELTDKFRKQSERFGTTIFTET-VTKVDFSS-KPFK-LFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-CCEEECSS-SSEE-EEC-SSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC-CEEE-EEE-CCcEEEcCEEEECCCCCc
Confidence 4677788888888999999987 99998876 6555 766 777899999999999764
No 390
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.04 E-value=0.25 Score=50.32 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=31.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+.+|.|||+|..|...|..|+++|++|++++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 467999999999999999999999999999886
No 391
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.04 E-value=0.29 Score=50.01 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999863
No 392
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.00 E-value=0.33 Score=44.57 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC----cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL----SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~----~V~vlE~~~ 53 (565)
.+|.|||+|..|.+.|..|.++|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999864
No 393
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.98 E-value=0.24 Score=48.90 Aligned_cols=35 Identities=34% Similarity=0.297 Sum_probs=31.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999864
No 394
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.89 E-value=0.25 Score=46.91 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999998853
No 395
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.79 E-value=0.23 Score=46.11 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=29.6
Q ss_pred CEEEEcCChhHHHHHHHHHHCC-CcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGG-LSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G-~~V~vlE~~~ 53 (565)
+|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5999999999999999999999 9999998863
No 396
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.77 E-value=0.28 Score=46.05 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.6
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999998753
No 397
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.71 E-value=0.22 Score=53.49 Aligned_cols=33 Identities=24% Similarity=0.170 Sum_probs=30.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 398
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.61 E-value=0.24 Score=50.39 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHC--CCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARG--GLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~~ 53 (565)
.+|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999998853
No 399
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.58 E-value=0.3 Score=47.77 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=34.9
Q ss_pred CCCCEEEEcC-ChhHHHHHHHHHHCCC---cEEEEcccC-CCCCe
Q 038727 19 KKWDALVIGG-GHNGLIAAAYLARGGL---SVAVLERRH-VIGGA 58 (565)
Q Consensus 19 ~~~dViIIGa-GiaGL~aA~~La~~G~---~V~vlE~~~-~~GG~ 58 (565)
...+|+|||| |..|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4678999999 9999999999999997 999999976 44554
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.58 E-value=0.29 Score=45.34 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=31.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC----CcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG----LSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G----~~V~vlE~~~~ 54 (565)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998764
No 401
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.57 E-value=0.32 Score=45.40 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=29.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..|+|+|+|-.|.++|..|++.|.+|+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999875
No 402
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.50 E-value=0.28 Score=46.97 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=30.4
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
...+|+|||+|..|.++|+.|+..|. ++.++|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 44689999999999999999999987 89999985
No 403
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=89.50 E-value=0.33 Score=47.84 Aligned_cols=48 Identities=23% Similarity=0.181 Sum_probs=32.9
Q ss_pred cccCccccccccCCCCCEEEEcC-ChhHHHHHHHHHHCC-CcEEEEcccC
Q 038727 6 FSNGVSLTRTLKDKKWDALVIGG-GHNGLIAAAYLARGG-LSVAVLERRH 53 (565)
Q Consensus 6 ~~~~~~~~~~~~~~~~dViIIGa-GiaGL~aA~~La~~G-~~V~vlE~~~ 53 (565)
.+.+|..|..+......|+|.|| |.-|...+..|.+.| ++|+++.++.
T Consensus 18 ~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 67 (377)
T 2q1s_A 18 GSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLL 67 (377)
T ss_dssp --------CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred cccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCC
Confidence 34455545443334457999997 999999999999999 9999998864
No 404
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.40 E-value=0.36 Score=46.20 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 579999999999999999999988 999999865
No 405
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.37 E-value=0.28 Score=48.05 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|+|..|+.++..|+..|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998863
No 406
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.33 E-value=0.42 Score=44.86 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC---cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL---SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~---~V~vlE~~~ 53 (565)
.+|.|||+|..|.+.|..|+++|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999875
No 407
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.30 E-value=0.27 Score=49.06 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=30.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
-+.-|||.|--|+..|..|+++|++|++++.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 368999999999999999999999999999874
No 408
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.26 E-value=0.37 Score=44.69 Aligned_cols=34 Identities=35% Similarity=0.517 Sum_probs=30.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+++|||+|-+|-++|+.|++.|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999998864
No 409
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.23 E-value=0.28 Score=46.57 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
..+|+|||||..|...|+.|+..|+ +|+++|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3679999999999999999999998 999999875
No 410
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.11 E-value=0.27 Score=47.02 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=30.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC--CcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG--LSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G--~~V~vlE~~~ 53 (565)
.+|+|||+|-.|.+.|..|++.| ++|++++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 7999999863
No 411
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.05 E-value=0.28 Score=45.20 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=30.6
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
..+|+|||+|-.|..+|..|++.|. +|+|++.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999997 899999864
No 412
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.04 E-value=0.35 Score=49.28 Aligned_cols=32 Identities=38% Similarity=0.433 Sum_probs=30.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999885
No 413
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.95 E-value=0.23 Score=46.80 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=29.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|..|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 457999999999999999999999 999998754
No 414
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.81 E-value=0.2 Score=48.99 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=31.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC-------CcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG-------LSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G-------~~V~vlE~~~~ 54 (565)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 99999998754
No 415
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.79 E-value=0.5 Score=45.27 Aligned_cols=50 Identities=8% Similarity=0.078 Sum_probs=39.2
Q ss_pred HHHHHHcCcEEEeCcceeEEEecCCCceeEEEeCC-----CcEEecCEEEECCChHH
Q 038727 278 SKAATKAGAHILVNTEVSQIMIGDSGEVDGVLLVD-----GTRVHSSFVLSNATPYK 329 (565)
Q Consensus 278 ~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~~~-----G~~~~ad~VI~a~~~~~ 329 (565)
.+.+++.|++++++++|++|..++ + +.+|++.+ ++++.+|.||++++...
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~-~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGED-K-IEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSS-S-CCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred HHHHhcCCeEEEeCceeeEEecCC-c-eEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 344788999999999999998776 5 45577665 45789999999988543
No 416
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.68 E-value=0.4 Score=46.48 Aligned_cols=36 Identities=28% Similarity=0.279 Sum_probs=30.7
Q ss_pred CCCCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 19 KKWDALVIGG-GHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 19 ~~~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
+...|+|.|| |.-|...+..|.+.|++|+++.++..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4457999998 99999999999999999999988754
No 417
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.65 E-value=0.19 Score=50.19 Aligned_cols=31 Identities=29% Similarity=0.391 Sum_probs=28.3
Q ss_pred CCEEEEcCChhHHHHHHHHHH-CCCcEEEEcc
Q 038727 21 WDALVIGGGHNGLIAAAYLAR-GGLSVAVLER 51 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~-~G~~V~vlE~ 51 (565)
++|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 469999999999999999998 5999999983
No 418
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.63 E-value=0.36 Score=45.44 Aligned_cols=31 Identities=32% Similarity=0.352 Sum_probs=28.8
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|.|||+|..|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999998864
No 419
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=88.62 E-value=0.24 Score=49.25 Aligned_cols=34 Identities=29% Similarity=0.589 Sum_probs=30.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCC--CcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGG--LSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G--~~V~vlE~~~~ 54 (565)
.+|||||||.+|++||.+|++.| .+|+|+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 47999999999999999999876 58999999875
No 420
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.49 E-value=0.32 Score=45.89 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=29.5
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999864
No 421
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.39 E-value=0.51 Score=44.29 Aligned_cols=33 Identities=33% Similarity=0.352 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|.|+|.-|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 469999999999999999999999999998864
No 422
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.27 E-value=0.41 Score=44.93 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=28.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
+|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 59999999999999999999998 89999875
No 423
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.26 E-value=0.42 Score=46.94 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 569999999999999999999999999998763
No 424
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.25 E-value=0.31 Score=52.25 Aligned_cols=33 Identities=33% Similarity=0.294 Sum_probs=30.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||||..|-..|..++.+|++|+++|.++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 479999999999999999999999999999864
No 425
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.13 E-value=0.37 Score=45.97 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=29.6
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999987 899999865
No 426
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.11 E-value=0.32 Score=45.44 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=29.8
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..|+|||+|-.|.++|..|++.|.+|+|+.++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999885
No 427
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.11 E-value=0.36 Score=49.03 Aligned_cols=46 Identities=17% Similarity=0.208 Sum_probs=35.0
Q ss_pred cCcEEEeCcceeEEEecCCC-ceeEEEeC---------------CC--cEEecCEEEECCChHH
Q 038727 284 AGAHILVNTEVSQIMIGDSG-EVDGVLLV---------------DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 284 ~G~~i~~~~~V~~I~~~~~~-~v~~V~~~---------------~G--~~~~ad~VI~a~~~~~ 329 (565)
+|++|++++.+++|..++++ ++.+|++. +| +++.+|.||++++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 68999999999999865314 66666653 34 4789999999998665
No 428
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.08 E-value=0.31 Score=50.71 Aligned_cols=40 Identities=35% Similarity=0.532 Sum_probs=35.4
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHHHC-CCcEEEEcccCCCC
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLARG-GLSVAVLERRHVIG 56 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La~~-G~~V~vlE~~~~~G 56 (565)
...++|+||||+|.+|+++|.+|++. |.+|+|||+.....
T Consensus 10 ~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 10 SDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred ccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 33569999999999999999999998 89999999987543
No 429
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.05 E-value=0.26 Score=55.07 Aligned_cols=36 Identities=25% Similarity=0.164 Sum_probs=33.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIG 56 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~G 56 (565)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 579999999999999999999999999999987654
No 430
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.00 E-value=0.41 Score=45.84 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
..+|+|||+|..|.++|+.|+..|. +|+++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999997 899999853
No 431
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=87.99 E-value=0.36 Score=52.21 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=30.8
Q ss_pred CCEEEEc--CChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIG--GGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIG--aGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+||| ||..|+-+|..|++.|.+|+|+|+.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799999 99999999999999999999999865
No 432
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.94 E-value=0.35 Score=44.71 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=30.2
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999998863
No 433
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.94 E-value=0.59 Score=45.11 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=29.5
Q ss_pred CCCEEEEcC-ChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 20 KWDALVIGG-GHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGa-GiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
..+|+|||+ |..|.++|+.|+..|. +|+++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 467999998 9999999999999984 89999975
No 434
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.81 E-value=0.19 Score=45.72 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=29.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+.+|+|+|+|-.|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4569999999999999999999999 99999875
No 435
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.79 E-value=0.38 Score=44.61 Aligned_cols=30 Identities=23% Similarity=0.161 Sum_probs=28.1
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcc
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLER 51 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~ 51 (565)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 599999999999999999999999999866
No 436
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.76 E-value=0.57 Score=44.32 Aligned_cols=47 Identities=19% Similarity=0.062 Sum_probs=32.3
Q ss_pred cccCccccccccC-CCCCEEEEcCC---hhHHHHHHHHHHCCCcEEEEccc
Q 038727 6 FSNGVSLTRTLKD-KKWDALVIGGG---HNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 6 ~~~~~~~~~~~~~-~~~dViIIGaG---iaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+.+.|..|..+.. ....|+|.||+ --|..+|..|++.|.+|++..++
T Consensus 15 ~~~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 15 QTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp ------CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 3445666665544 33458888985 67999999999999999999875
No 437
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.56 E-value=0.52 Score=48.00 Aligned_cols=32 Identities=25% Similarity=0.222 Sum_probs=30.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|.|||+|..|...|..|+++|++|++++++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 57999999999999999999999999999885
No 438
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.52 E-value=0.47 Score=44.90 Aligned_cols=32 Identities=22% Similarity=0.161 Sum_probs=29.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
.+|+|||+|-.|.++|..|++.|. +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 89999886
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.39 E-value=0.48 Score=43.99 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=30.0
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCc-EEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLS-VAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~-V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 89998763
No 440
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.37 E-value=0.61 Score=44.75 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=30.5
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
...+|+|||+|..|.++|+.|+..|. +++++|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999987 89999985
No 441
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.37 E-value=0.52 Score=42.06 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=29.1
Q ss_pred CEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999998853
No 442
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.32 E-value=0.34 Score=45.78 Aligned_cols=32 Identities=31% Similarity=0.205 Sum_probs=29.4
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 469999999999999999999999999998 54
No 443
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.30 E-value=0.62 Score=45.04 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=30.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999998864
No 444
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.22 E-value=0.59 Score=42.99 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.7
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
+++|||+|-+|-+++..|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899998863
No 445
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.21 E-value=1.2 Score=42.66 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe---CCCcEEecCEEEECCChH
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL---VDGTRVHSSFVLSNATPY 328 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~---~~G~~~~ad~VI~a~~~~ 328 (565)
..+.+.+.+.+++.|+++++++ |++|..++ +.+. +.+ .++.++.+|.||++++..
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSS-KPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSS-SSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 4678888888999999999998 99999887 6665 655 366779999999999874
No 446
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=87.17 E-value=0.36 Score=49.99 Aligned_cols=41 Identities=29% Similarity=0.365 Sum_probs=37.1
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCCCCCee
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGLSVAVLERRHVIGGAA 59 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~~GG~~ 59 (565)
.++||+|||||++||+||+.|++.|++|+|||+++.++++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 45899999999999999999999999999999998776543
No 447
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.17 E-value=0.51 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=29.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC--cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL--SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~~ 53 (565)
..+|+|||+|..|.+.|+.|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3579999999999999999998875 799999863
No 448
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.10 E-value=0.54 Score=46.27 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...|+|||+|..|+.+|..|+..|.+|++++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3569999999999999999999999999999753
No 449
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.09 E-value=0.44 Score=48.23 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..+|+|||+|-.|...|..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 356999999999999999999999999999875
No 450
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.00 E-value=0.45 Score=44.49 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=29.9
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
.+|+|||+|-.|.+.|..|.+.|.+|+|++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999886
No 451
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.87 E-value=0.51 Score=45.14 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=29.4
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
..+|+|||+|-.|.+.|+.|+..|. +|.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999884 79999875
No 452
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=86.84 E-value=0.54 Score=43.51 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=28.5
Q ss_pred CCCCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
....|+|.|| |--|...|..|+++|++|+++.++.
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3345888886 6678999999999999999998864
No 453
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=86.84 E-value=0.54 Score=45.15 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=30.9
Q ss_pred cCCCCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 17 KDKKWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 17 ~~~~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
+.++.+|+|||+|-.|.+.|+.|+..+. ++.++|.+
T Consensus 6 ~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3455789999999999999999998876 78899874
No 454
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=86.76 E-value=0.4 Score=47.04 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=27.7
Q ss_pred ccCCCCCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 16 LKDKKWDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 16 ~~~~~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
|+.++++|+|||||..|-.+|..|++ .++|+|.+++
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~ 47 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVN 47 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcC
Confidence 56678899999999999999999976 4788887664
No 455
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.75 E-value=0.43 Score=44.78 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=30.2
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|||.-|...+..|.++|++|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999998753
No 456
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.61 E-value=0.48 Score=53.36 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 379999999999999999999996 899999876
No 457
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.60 E-value=0.58 Score=44.32 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=30.6
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|.+||-|..|...|..|.++|++|+|++++.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999863
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.56 E-value=0.59 Score=41.85 Aligned_cols=31 Identities=29% Similarity=0.376 Sum_probs=28.9
Q ss_pred CEEEEcC-ChhHHHHHHHHHHCCCcEEEEccc
Q 038727 22 DALVIGG-GHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 22 dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+|+|+|| |.-|...+..|.++|++|+++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999998 999999999999999999999875
No 459
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.54 E-value=0.67 Score=43.76 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=30.0
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
++|+|.|| |.-|...+.+|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 36999998 9999999999999999999997754
No 460
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.54 E-value=0.68 Score=42.95 Aligned_cols=32 Identities=41% Similarity=0.495 Sum_probs=29.9
Q ss_pred CEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
+|+|||+|-.|.+.|..|.+.|.+|+|++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998863
No 461
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.48 E-value=0.72 Score=42.74 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=28.1
Q ss_pred CCEEEEcC-Ch-hHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGG-GH-NGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGa-Gi-aGL~aA~~La~~G~~V~vlE~~ 52 (565)
..|+|.|| |- -|...|..|+++|++|+++.++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 45899998 74 8999999999999999999875
No 462
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=86.43 E-value=0.42 Score=46.31 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=29.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|+|||+|.+|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 357999999999999999999998 699998863
No 463
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.41 E-value=0.48 Score=48.55 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCCCEEEEcCChhHHH-HHHHHHHCCCcEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLI-AAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~-aA~~La~~G~~V~vlE~~~ 53 (565)
...+|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3457999999999997 6999999999999999764
No 464
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.20 E-value=0.66 Score=43.98 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=31.0
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3569999999999999999999999999999863
No 465
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.15 E-value=0.61 Score=44.27 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=29.1
Q ss_pred CCCEEEEcCC-hhHHHHHHHHHHCCCcEEEEccc
Q 038727 20 KWDALVIGGG-HNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaG-iaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..+|+|||+| +.|..+|..|...|.+|+|++++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4579999999 67999999999999999988664
No 466
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.05 E-value=0.59 Score=43.62 Aligned_cols=33 Identities=21% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
.+++|||+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 569999999999999999999998 899998864
No 467
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=85.98 E-value=0.8 Score=43.66 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.0
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..|+|+|| |.-|...+..|.+.|++|+++-++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 46999996 9999999999999999999998865
No 468
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.73 E-value=0.72 Score=43.55 Aligned_cols=34 Identities=29% Similarity=0.286 Sum_probs=30.9
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999864
No 469
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.75 E-value=0.16 Score=45.11 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=30.7
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3569999999999999999999999999998764
No 470
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.32 E-value=0.56 Score=48.76 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=31.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+|||+|.+|+-.|..|++.|.+|+|+++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 5799999999999999999999999999998653
No 471
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.19 E-value=0.69 Score=44.22 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=29.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC--cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL--SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~--~V~vlE~~ 52 (565)
+.+|+|||+|-.|.+.|+.|+..+. ++.++|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999999886 79999874
No 472
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.12 E-value=0.74 Score=43.80 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=29.0
Q ss_pred CEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 22 DALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
+|+|||||..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999863
No 473
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=85.11 E-value=0.61 Score=50.08 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=31.1
Q ss_pred CCEEEEc--CChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIG--GGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIG--aGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 4599999 999999999999999999999998753
No 474
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.89 E-value=0.66 Score=44.28 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=29.3
Q ss_pred CEEEEcC-ChhHHHHHHHHHHCC--CcEEEEcccC
Q 038727 22 DALVIGG-GHNGLIAAAYLARGG--LSVAVLERRH 53 (565)
Q Consensus 22 dViIIGa-GiaGL~aA~~La~~G--~~V~vlE~~~ 53 (565)
+|+|||| |..|.+.|..|+..| .+|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 6999998 999999999999988 6899999875
No 475
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.83 E-value=0.78 Score=46.20 Aligned_cols=33 Identities=36% Similarity=0.266 Sum_probs=30.4
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..|+|+|+|-.|..+|..|+..|.+|++.|.++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999998853
No 476
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=84.82 E-value=0.89 Score=43.99 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=30.6
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|| |.-|...+..|.+.|++|.++-++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 57999999 9999999999999999999998865
No 477
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=84.48 E-value=0.45 Score=49.37 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=42.7
Q ss_pred HHHHHHHcCcEEEeCcceeEEEecCC--CceeEEEeC--CCc--EE---ecCEEEECCChHHHHhhcC
Q 038727 277 ISKAATKAGAHILVNTEVSQIMIGDS--GEVDGVLLV--DGT--RV---HSSFVLSNATPYKTFMGLV 335 (565)
Q Consensus 277 l~~~l~~~G~~i~~~~~V~~I~~~~~--~~v~~V~~~--~G~--~~---~ad~VI~a~~~~~~~~~l~ 335 (565)
+...+++.|++|++++.|++|..+++ ++++||++. +|+ ++ .++.||++++...+ .+|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~s-p~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGT-PQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHH-HHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCC-HHHH
Confidence 33334567899999999999998761 289999885 465 34 46889999999876 4443
No 478
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=84.42 E-value=0.9 Score=42.45 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=30.2
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
..+++|||+|-+|-++|+.|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4579999999999999999999998 899997753
No 479
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=84.33 E-value=1 Score=41.96 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=29.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
..+++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999995 89999775
No 480
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.24 E-value=0.78 Score=43.16 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=28.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHC--CCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARG--GLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~--G~~V~vlE~~ 52 (565)
.+|.|||+|..|.+.|..|++. |++|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 4699999999999999999998 6789998875
No 481
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=84.15 E-value=1.2 Score=39.78 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=28.6
Q ss_pred CEEEEcC-ChhHHHHHHHHH-HCCCcEEEEcccC
Q 038727 22 DALVIGG-GHNGLIAAAYLA-RGGLSVAVLERRH 53 (565)
Q Consensus 22 dViIIGa-GiaGL~aA~~La-~~G~~V~vlE~~~ 53 (565)
.|+|+|| |..|...|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999995 999999999999 8999999998863
No 482
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.07 E-value=0.74 Score=42.58 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=28.6
Q ss_pred ccccccccCCCCCEEEEcC-ChhHHHHHHHHHHCCCcEEEEccc
Q 038727 10 VSLTRTLKDKKWDALVIGG-GHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 10 ~~~~~~~~~~~~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
+..|.++.+ ..|+|.|| |--|...|..|++.|++|+++.++
T Consensus 21 ~~~m~~l~~--k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 21 DKHMSSLSG--QVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp ----CTTTT--CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cchhhccCC--CEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 333444433 34777775 677999999999999999998775
No 483
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.99 E-value=0.99 Score=42.94 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=29.8
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
...++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 89999876
No 484
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.97 E-value=0.71 Score=41.45 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.1
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
.+|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 46999995 9999999999999999999998864
No 485
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.96 E-value=0.63 Score=44.78 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=29.2
Q ss_pred CCCEEEEcC-ChhHHHHHHHHHHCCC-------cEEEEccc
Q 038727 20 KWDALVIGG-GHNGLIAAAYLARGGL-------SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGa-GiaGL~aA~~La~~G~-------~V~vlE~~ 52 (565)
..+|+|||| |..|.+.+..|+..|. +|.++|.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 457999998 9999999999999885 79999875
No 486
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=83.94 E-value=0.78 Score=42.39 Aligned_cols=33 Identities=33% Similarity=0.328 Sum_probs=28.6
Q ss_pred CCEEEEcC---ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG---GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa---GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..|+|.|| |--|...|..|+++|++|+++.++.
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45899997 5889999999999999999998754
No 487
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.93 E-value=0.9 Score=39.88 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=30.1
Q ss_pred CCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccC
Q 038727 21 WDALVIGG-GHNGLIAAAYLARGGLSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~ 53 (565)
..|+|+|| |.-|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999998864
No 488
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=83.90 E-value=1.1 Score=42.06 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=29.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
...++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 69999775
No 489
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.89 E-value=1 Score=43.88 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=29.7
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..|+|+|+|-.|..+|..|.+.|.+|++.+.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 56999999999999999999999999999864
No 490
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.88 E-value=0.7 Score=43.50 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=28.5
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEccc
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERR 52 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~ 52 (565)
..++|+|+|-.|.++|..|++.| +|+|+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999775
No 491
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.84 E-value=0.93 Score=47.34 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=32.3
Q ss_pred CCEEEEcCChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 21 WDALVIGGGHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 21 ~dViIIGaGiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
.+++|||+|--|...|..|.+.|++|+|+|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 6799999999999999999999999999999875
No 492
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.73 E-value=0.98 Score=41.48 Aligned_cols=34 Identities=32% Similarity=0.477 Sum_probs=30.3
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4679999999999999999999996 688988863
No 493
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=83.54 E-value=1.1 Score=42.63 Aligned_cols=35 Identities=37% Similarity=0.445 Sum_probs=31.6
Q ss_pred CCCEEEEcC-ChhHHHHHHHHHHCCCcEEEEcccCC
Q 038727 20 KWDALVIGG-GHNGLIAAAYLARGGLSVAVLERRHV 54 (565)
Q Consensus 20 ~~dViIIGa-GiaGL~aA~~La~~G~~V~vlE~~~~ 54 (565)
..+|+|.|| |.-|...+..|.+.|++|+++.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 357999999 99999999999999999999988654
No 494
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=83.49 E-value=0.8 Score=46.36 Aligned_cols=44 Identities=14% Similarity=0.079 Sum_probs=33.1
Q ss_pred cCcEEEeCcceeEEEecCCCceeEEEeC----------------CC--cEEecCEEEECCChHH
Q 038727 284 AGAHILVNTEVSQIMIGDSGEVDGVLLV----------------DG--TRVHSSFVLSNATPYK 329 (565)
Q Consensus 284 ~G~~i~~~~~V~~I~~~~~~~v~~V~~~----------------~G--~~~~ad~VI~a~~~~~ 329 (565)
+|++|++++.+++|..+ +++.+|++. +| +++.+|.||++++...
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 67899999999999754 455555553 34 3689999999998654
No 495
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.43 E-value=0.75 Score=43.17 Aligned_cols=34 Identities=21% Similarity=0.468 Sum_probs=30.1
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
..+|+|||+|-.|..+|..|+++|. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4679999999999999999999996 788888753
No 496
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=83.42 E-value=0.91 Score=45.64 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCcceeEEEecCCCceeEEEe--CC-----CcEEecCEEEECCC
Q 038727 271 GSVSLAISKAATKAGAHILVNTEVSQIMIGDSGEVDGVLL--VD-----GTRVHSSFVLSNAT 326 (565)
Q Consensus 271 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~v~~V~~--~~-----G~~~~ad~VI~a~~ 326 (565)
..+.+.+.+.+++.|++++++++|++|..+ ++. +.. .+ ++++.+|.||++++
T Consensus 208 ~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~---~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 208 GDSKGILTKGLKEEGIEAYTNCKVTKVEDN---KMY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp TTHHHHHHHHHHHTTCEEECSEEEEEEETT---EEE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred hHHHHHHHHHHHHCCCEEEcCCEEEEEECC---eEE-EEecccCCccccceEEEEeEEEEcCC
Confidence 346677888899999999999999999643 222 222 23 55789999998764
No 497
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=83.35 E-value=1 Score=42.20 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=29.5
Q ss_pred CCCEEEEcCChhHHHHHHHHHHCCC-cEEEEccc
Q 038727 20 KWDALVIGGGHNGLIAAAYLARGGL-SVAVLERR 52 (565)
Q Consensus 20 ~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~ 52 (565)
...++|||+|-+|.++|..|++.|. +|+|+.++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 4569999999999999999999995 89999875
No 498
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=83.32 E-value=0.75 Score=44.19 Aligned_cols=33 Identities=12% Similarity=0.208 Sum_probs=29.5
Q ss_pred CCEEEEc-CChhHHHHHHHHHHCC--CcEEEEcccC
Q 038727 21 WDALVIG-GGHNGLIAAAYLARGG--LSVAVLERRH 53 (565)
Q Consensus 21 ~dViIIG-aGiaGL~aA~~La~~G--~~V~vlE~~~ 53 (565)
.+|+||| +|..|.+.+..|+..| .+|.+++.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 5799999 7999999999999998 7899998754
No 499
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.32 E-value=1.1 Score=42.98 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=30.7
Q ss_pred CCCCEEEEcCChhHHHHHHHHHHCCC-cEEEEcccC
Q 038727 19 KKWDALVIGGGHNGLIAAAYLARGGL-SVAVLERRH 53 (565)
Q Consensus 19 ~~~dViIIGaGiaGL~aA~~La~~G~-~V~vlE~~~ 53 (565)
+..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 35679999999999999999999996 688888854
No 500
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=83.24 E-value=0.7 Score=47.46 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=29.7
Q ss_pred CEEEEcCChhHHHHHHHHHHC--------------CCcEEEEcccCCCC
Q 038727 22 DALVIGGGHNGLIAAAYLARG--------------GLSVAVLERRHVIG 56 (565)
Q Consensus 22 dViIIGaGiaGL~aA~~La~~--------------G~~V~vlE~~~~~G 56 (565)
.++|||||..|+-+|..|++. ..+|+|+|+.+++-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 599999999999999988764 36799999988653
Done!