BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038743
(839 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 180/309 (58%), Gaps = 16/309 (5%)
Query: 481 AVENSLIVCGAPVNFTYRDLQIRTSNFAQ--LLGTGGFGSVYKGSLGDGTLVAVKKL-DR 537
A E+ + G F+ R+LQ+ + NF+ +LG GGFG VYKG L DGTLVAVK+L +
Sbjct: 14 AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE 73
Query: 538 VLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHR 597
GE +F TEV I H NL+RL G+C + RLLVY +M NGS+ + R
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL------R 127
Query: 598 DRV-----LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652
+R LDW R IA+ +A+G+AY H+ C +IIH D+K NILLDE F V DFG
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS- 711
LAKLM + V VRGT G++APE++S + K DV+ YG++LLE++ G+R D++
Sbjct: 188 LAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 712 -GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770
+ +D W + + D L+G ++EE+ + ++VA C Q RP M
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
Query: 771 GEVVKMLEG 779
EVV+MLEG
Sbjct: 308 SEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 176/309 (56%), Gaps = 16/309 (5%)
Query: 481 AVENSLIVCGAPVNFTYRDLQIRTSNF--AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRV 538
A E+ + G F+ R+LQ+ + NF +LG GGFG VYKG L DG LVAVK+L
Sbjct: 6 AEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 539 LPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHR 597
G E +F TEV I H NL+RL G+C + RLLVY +M NGS+ + R
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL------R 119
Query: 598 DRV-----LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652
+R LDW R IA+ +A+G+AY H+ C +IIH D+K NILLDE F V DFG
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS- 711
LAKLM + V VRG G++APE++S + K DV+ YG++LLE++ G+R D++
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 712 -GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770
+ +D W + + D L+G ++EE+ + ++VA C Q RP M
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 771 GEVVKMLEG 779
EVV+MLEG
Sbjct: 300 SEVVRMLEG 308
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 158/285 (55%), Gaps = 11/285 (3%)
Query: 499 DLQIRTSNFAQ--LLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM 556
DL+ T+NF L+G G FG VYKG L DG VA+K+ G +EF TE+ T+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H +LV L G+C E + +L+Y++M+NG+L + ++ S + W R I I A+G
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARG 151
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL---MGREHSQVVTMVRGTRG 673
+ Y H + IIH D+K NILLDENF PK++DFG++K +G+ H + +V+GT G
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTH--LXXVVKGTLG 206
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733
Y+ PE+ +T K+DVYS+G++L E++ R + S E WA + NG
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
++ D L + E L + A C+ RPSMG+V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 157/284 (55%), Gaps = 9/284 (3%)
Query: 499 DLQIRTSNFAQ--LLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM 556
DL+ T+NF L+G G FG VYKG L DG VA+K+ G +EF TE+ T+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H +LV L G+C E + +L+Y++M+NG+L + ++ S + W R I I A+G
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARG 151
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--HSQVVTMVRGTRGY 674
+ Y H + IIH D+K NILLDENF PK++DFG++K G E + + +V+GT GY
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK-KGTELDQTHLXXVVKGTLGY 207
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734
+ PE+ +T K+DVYS+G++L E++ R + S E WA + NG +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
+ D L + E L + A C+ RPSMG+V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 42/308 (13%)
Query: 494 NFTYRDLQIRTSNFAQL--------LGTGGFGSVYKGSLGDGTLVAVKKL----DRVLPH 541
+F++ +L+ T+NF + +G GGFG VYKG + + T VAVKKL D
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEE 72
Query: 542 GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV- 600
+++F E+ + H NLV L G+ S+G + LVY +M NGSL DR+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------LDRLS 122
Query: 601 -------LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653
L W R IA A GI + HE N IH DIK NILLDE F K+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 654 AKLMGREHSQVVTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711
A+ + +Q V R GT Y+APE + IT K+D+YS+G++LLEI+ G +D
Sbjct: 180 AR-ASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEH 237
Query: 712 GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAM-KVAFWCIQDEVFMRPSM 770
+ + E T D+++ A + + AM VA C+ ++ RP +
Sbjct: 238 REPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 771 GEVVKMLE 778
+V ++L+
Sbjct: 295 KKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 42/308 (13%)
Query: 494 NFTYRDLQIRTSNFAQL--------LGTGGFGSVYKGSLGDGTLVAVKKL----DRVLPH 541
+F++ +L+ T+NF + +G GGFG VYKG + + T VAVKKL D
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEE 66
Query: 542 GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV- 600
+++F E+ + H NLV L G+ S+G + LVY +M NGSL DR+
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------LDRLS 116
Query: 601 -------LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653
L W R IA A GI + HE N IH DIK NILLDE F K+SDFGL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGL 173
Query: 654 AKLMGREHSQVVTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711
A+ + +Q V R GT Y+APE + IT K+D+YS+G++LLEI+ G +D
Sbjct: 174 AR-ASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEH 231
Query: 712 GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAM-KVAFWCIQDEVFMRPSM 770
+ + E T D+++ A + + AM VA C+ ++ RP +
Sbjct: 232 REPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDI 288
Query: 771 GEVVKMLE 778
+V ++L+
Sbjct: 289 KKVQQLLQ 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 42/308 (13%)
Query: 494 NFTYRDLQIRTSNFAQL--------LGTGGFGSVYKGSLGDGTLVAVKKL----DRVLPH 541
+F++ +L+ T+NF + +G GGFG VYKG + + T VAVKKL D
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEE 72
Query: 542 GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV- 600
+++F E+ + H NLV L G+ S+G + LVY +M NGSL DR+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------LDRLS 122
Query: 601 -------LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653
L W R IA A GI + HE N IH DIK NILLDE F K+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 654 AKLMGREHSQVVTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711
A+ + +Q V R GT Y+APE + IT K+D+YS+G++LLEI+ G +D
Sbjct: 180 AR-ASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEH 237
Query: 712 GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAM-KVAFWCIQDEVFMRPSM 770
+ + E T D+++ A + + AM VA C+ ++ RP +
Sbjct: 238 REPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 771 GEVVKMLE 778
+V ++L+
Sbjct: 295 KKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 149/307 (48%), Gaps = 40/307 (13%)
Query: 494 NFTYRDLQIRTSNFAQL--------LGTGGFGSVYKGSLGDGTLVAVKKL----DRVLPH 541
+F++ +L+ T+NF + G GGFG VYKG + + T VAVKKL D
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 63
Query: 542 GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV- 600
+++F E+ H NLV L G+ S+G + LVY + NGSL DR+
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----------LDRLS 113
Query: 601 -------LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653
L W R IA A GI + HE N IH DIK NILLDE F K+SDFGL
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 654 AKLMGREHSQVVTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711
A+ + +Q V R GT Y APE + IT K+D+YS+G++LLEI+ G +D
Sbjct: 171 AR-ASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEH 228
Query: 712 GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMG 771
+ + E T D++ A + + VA C+ ++ RP +
Sbjct: 229 REPQ-LLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 772 EVVKMLE 778
+V ++L+
Sbjct: 287 KVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEK--EFVTEVNTIGSMHHMNLVR 563
N + +G G FG+V++ G+ VAVK L H E+ EF+ EV + + H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G ++ N +V E++ GSL + + S LD R ++A A+G+ Y H +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNR 156
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
I+H D+K N+L+D+ + KV DFGL++L GT ++APE + +
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX-SKXAAGTPEWMAPEVLRDE 214
Query: 684 PITVKADVYSYGMLLLEI 701
P K+DVYS+G++L E+
Sbjct: 215 PSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEK--EFVTEVNTIGSMHHMNLVR 563
N + +G G FG+V++ G+ VAVK L H E+ EF+ EV + + H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G ++ N +V E++ GSL + + S LD R ++A A+G+ Y H +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNR 156
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
I+H ++K N+L+D+ + KV DFGL++L + GT ++APE + +
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDE 214
Query: 684 PITVKADVYSYGMLLLEI 701
P K+DVYS+G++L E+
Sbjct: 215 PSNEKSDVYSFGVILWEL 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
+G+G FG+VYKG V + K+ P + F EV + H+N++ GY ++
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
N +V ++ + SL K + H ++ +IA TAQG+ Y H + IIH
Sbjct: 104 -DNLAIVTQWCEGSSLYKHL----HVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIH 155
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV---SNRPIT 686
D+K NI L E K+ DFGLA + R SQ V G+ ++APE + N P +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 687 VKADVYSYGMLLLEIVGG 704
++DVYSYG++L E++ G
Sbjct: 216 FQSDVYSYGIVLYELMTG 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 144
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + R E++F+ E + + H LV+L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV+EFM++G L ++ + + T + + +G+AY E C
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 126
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 185 SSKSDVWSFGVLMWEV 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + R E++F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV+EFM++G L ++ + + T + + +G+AY E C
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 123
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY S +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 70 MGY-STAPQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 681 SNR---PITVKADVYSYGMLLLEIVGGR 705
+ P + ++DVY++G++L E++ G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + R E++F+ E + + H LV+L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV+EFM++G L ++ + + T + + +G+AY E C
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 121
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 180 SSKSDVWSFGVLMWEV 195
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 75 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 509 QLLGTGGFGSVYKGSLGDGT-----LVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLV 562
+++G G FG VYKG L + VA+K L ++ +F+ E +G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
RL G S+ +++ E+M+NG+LDK++ +D + A G+ Y
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL----REKDGEFSVLQLVGMLRGIAAGMKYL-- 163
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG--YLAPEWV 680
+H D+ NIL++ N KVSDFGL++++ + T G + APE +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 681 SNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739
S R T +DV+S+G+++ E++ G R P W E++N +K +
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGER-------------PYW---ELSNHEVMKAINDG 266
Query: 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
+ ++ C Q E RP ++V +L+
Sbjct: 267 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 97 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 148
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 98 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 75 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 72 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 681 SNR---PITVKADVYSYGMLLLEIVGGR 705
+ P + ++DVY++G++L E++ G+
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 70 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 145
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 140
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 111 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 163
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 164
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 143
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 144
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 137
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 138 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 145
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 142
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ Y + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 508 AQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
++LG G FG K + + G ++ +K+L R ++ F+ EV + + H N+++ G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
+ + E++K G+L I D W+ R + A A G+AY H
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGII----KSMDSQYPWSQRVSFAKDIASGMAYLHSM--- 127
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-------------VRGTRG 673
IIH D+ N L+ EN V+DFGLA+LM E +Q + V G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLD 709
++APE ++ R K DV+S+G++L EI+ GR N D
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 204
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 145
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 143
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 146
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 150
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 145
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN 560
+F +++G G FG VY G+L G AVK L+R+ GE +F+TE + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 561 LVRLCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIAIATAQG 616
++ L G C SEGS L+V +MK+G L +I R+ + T + + A+G
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFI------RNETHNPTVKDLIGFGLQVAKG 146
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+ + + +H D+ N +LDE F KV+DFGLA+ M + V G +
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + + T K+DV+S+G+LL E++
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + R E++F+ E + + H LV+L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV EFM++G L ++ + + T + + +G+AY E C
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 124
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 183 SSKSDVWSFGVLMWEV 198
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 98 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA R S + G+ ++APE +
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 70 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA R S + G+ ++APE +
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TAQG+ Y H
Sbjct: 90 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHIIETKFEMIKLIDIARQTAQGMDYLH 141
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA R S + G+ ++APE +
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
P + ++DVY++G++L E++ G+
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + E +F+ E + + H LV+L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV+EFM++G L ++ + + T + + +G+AY E C
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 143
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 202 SSKSDVWSFGVLMWEV 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 22 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 78
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 79 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 134
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 135 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 191
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 192 YGTFTIKSDVWSFGILLTEIV 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 76
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 77 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 132
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 133 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 189
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 190 YGTFTIKSDVWSFGILLTEIV 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 37/293 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
+++ I Q++G G FG V G L VA+K L ++ +F++E +
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++ L G ++ + +++ EFM+NGSLD ++ D +
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGMLRG 143
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGT 671
A G+ Y + +H D+ NIL++ N KVSDFGL++ + + S T G
Sbjct: 144 IAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 672 R---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEM 727
+ + APE + R T +DV+SYG+++ E++ G R P W +M
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-------------PYW---DM 244
Query: 728 TNGTPLKV--ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
TN + D RL ++ + + + W Q + RP G++V L+
Sbjct: 245 TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW--QKDRNHRPKFGQIVNTLD 295
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 23 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 79
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 80 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 135
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 136 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 192
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 193 YGTFTIKSDVWSFGILLTEIV 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH---RDRVLDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TA+G+ Y H
Sbjct: 74 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHASETKFEMKKLIDIARQTARGMDYLH 125
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA + R S + G+ ++APE +
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
+ P + ++DVY++G++L E++ G+
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 16 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 72
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 73 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 128
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 129 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 185
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 186 YGTFTIKSDVWSFGILLTEIV 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 70
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 127 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 184 YGTFTIKSDVWSFGILLTEIV 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 70
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 127 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 184 YGTFTIKSDVWSFGILLTEIV 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 15 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 71
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 72 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 127
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 128 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 184
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 185 YGTFTIKSDVWSFGILLTEIV 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 35/281 (12%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 24 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 80
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWI-FPSYHHRDRVLDWTTRFNIAIATAQGIAYF 620
VRL ++ ++ E+M+NGSL ++ PS L ++A A+G+A+
Sbjct: 81 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFI 135
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV 680
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE +
Sbjct: 136 EE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 192
Query: 681 SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740
+ T+K+DV+S+G+LL EIV R YPG MTN ++ +R
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGR----------IPYPG-----MTNPEVIQNLERGY 237
Query: 741 EGAVEE---EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
+ EEL + M++ C ++ RP+ + +LE
Sbjct: 238 RMVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 275
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL-----PHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V + ++L P
Sbjct: 3 APNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
EF+ E + SM H +LVRL G C + +L V + M +G L +++ + H+D +
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYV---HEHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM-GREHSQ 663
N + A+G+ Y E+ R++H D+ N+L+ K++DFGLA+L+ G E
Sbjct: 118 LLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
Query: 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV--GGR 705
+ ++A E + R T ++DV+SYG+ + E++ GG+
Sbjct: 175 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 76
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 77 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 132
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 133 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 189
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
T+K+DV+S+G+LL EIV R YPG MTN ++ +R
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGR----------IPYPG-----MTNPEVIQNLERGYR 234
Query: 742 GAVEE---EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
+ EEL + M++ C ++ RP+ + +LE
Sbjct: 235 MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 47/297 (15%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSL---GDGTL-VAVKKLDRVLPHGEKE---FVTEV 550
++++ +++G G FG V G L G L VA+K L + + EK+ F+ E
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK--VGYTEKQRRDFLGEA 74
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
+ +G H N++ L G ++ ++V E+M+NGSLD ++ D +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGML 130
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ G+ Y + +H D+ NIL++ N KVSDFGL++++ + T
Sbjct: 131 RGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT---- 183
Query: 671 TRG------YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWA 723
TRG + APE ++ R T +DV+SYG+++ E+V G R P W
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER-------------PYW- 229
Query: 724 FKEMTNGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
EMTN +K + RL ++ + + + W Q E RP E+V ML+
Sbjct: 230 --EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCW--QKERNSRPKFDEIVNMLD 282
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 19 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 75
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 76 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 131
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 132 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 188
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 189 YGTFTIKSDVWSFGILLTEIV 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL-----PHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V + ++L P
Sbjct: 26 APNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
EF+ E + SM H +LVRL G C + +L V + M +G L +++ + H+D +
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYV---HEHKDNIGS-Q 140
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM-GREHSQ 663
N + A+G+ Y E+ R++H D+ N+L+ K++DFGLA+L+ G E
Sbjct: 141 LLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
Query: 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV--GGR 705
+ ++A E + R T ++DV+SYG+ + E++ GG+
Sbjct: 198 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F Q +G+G FG V+ G + VA+K + R E++F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + LV+EFM++G L ++ + + T + + +G+AY E
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEA-- 122
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+IH D+ N L+ EN KVSDFG+ + + + T + + +PE S
Sbjct: 123 -SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 686 TVKADVYSYGMLLLEI 701
+ K+DV+S+G+L+ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGLA+++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 70
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 127 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
T+K+DV+S+G+LL EIV R YPG MTN ++ +R
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGR----------IPYPG-----MTNPEVIQNLERGYR 228
Query: 742 GAVEE---EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
+ EEL + M++ C ++ RP+ + +LE
Sbjct: 229 MVRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 9 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 65
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 66 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 121
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 122 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 178
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 179 YGTFTIKSDVWSFGILLTEIV 199
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDR-VLPHGEKEFVTEVNT 552
+++ + +++G G FG V +G L + VA+K L +EF++E +
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G + +++ EFM+NG+LD ++ D +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRG 124
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y E +H D+ NIL++ N KVSDFGL++ + E+S T
Sbjct: 125 IASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL-EENSSDPTYTSSLG 180
Query: 673 G-----YLAPEWVSNRPITVKADVYSYGMLLLEIV--GGRRNLDMS 711
G + APE ++ R T +D +SYG+++ E++ G R DMS
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+ LG G FG V+ G + T VAVK L + + F+ E N + ++ H LVRL
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+ ++ E+M GSL F +VL + + A+G+AY R
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLD--FLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---R 128
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
IH D++ N+L+ E+ K++DFGLA+++ + + APE ++
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 686 TVKADVYSYGMLLLEIVG-------GRRNLDM 710
T+K+DV+S+G+LL EIV GR N D+
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTNADV 220
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G + T VAVK L + + F+ E N + ++ H LVRL ++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
++ EFM GSL F +VL + + A+G+AY R IH
Sbjct: 79 EEPIYIITEFMAKGSLLD--FLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ N+L+ E+ K++DFGLA+++ + + APE ++ T+K++
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 691 VYSYGMLLLEIVG-------GRRNLD-MSGDAEDFFYP 720
V+S+G+LL EIV GR N D MS ++ + P
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH---RDRVLDWTTRFNIAIATAQGIAYFH 621
GY S +V ++ + SL YHH + + +IA TA+G+ Y H
Sbjct: 86 MGY-STAPQLAIVTQWCEGSSL-------YHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA R S + G+ ++APE +
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
+ P + ++DVY++G++L E++ G+
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDR-VLPHGEKEFVTEVNT 552
+++ + +++G G FG V +G L + VA+K L +EF++E +
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G + +++ EFM+NG+LD ++ D +
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRG 126
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y E +H D+ NIL++ N KVSDFGL++ + E+S T
Sbjct: 127 IASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL-EENSSDPTETSSLG 182
Query: 673 G-----YLAPEWVSNRPITVKADVYSYGMLLLEIV--GGRRNLDMS 711
G + APE ++ R T +D +SYG+++ E++ G R DMS
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Query: 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRL 564
Q +G+G FG+VYKG GD VAVK L+ P + + F EV + H+N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH---RDRVLDWTTRFNIAIATAQGIAYFH 621
GY ++ +V ++ + SL YHH + + +IA TA+G+ Y H
Sbjct: 86 MGYSTK-PQLAIVTQWCEGSSL-------YHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPEWV 680
+ IIH D+K NI L E+ K+ DFGLA R S + G+ ++APE +
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 681 ---SNRPITVKADVYSYGMLLLEIVGGR 705
+ P + ++DVY++G++L E++ G+
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 126
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + T TR
Sbjct: 127 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 179
Query: 673 G------YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFK 725
G + +PE ++ R T +DV+SYG++L E++ G R P W
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW--- 223
Query: 726 EMTNGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
EM+N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 224 EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 276
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 153
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 154 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 209
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 253
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 254 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 303
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 47/297 (15%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEKE---FVTEV 550
++L + +++G G FG V G L VA+K L + + EK+ F+ E
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFLGEA 85
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
+ +G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGML 141
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + T
Sbjct: 142 RGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT---- 194
Query: 671 TRG------YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWA 723
TRG + +PE ++ R T +DV+SYG++L E++ G R P W
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW- 240
Query: 724 FKEMTNGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
EM+N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 241 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKL----DRVLPHGEKEFVTEVNTIGSMHHMNL 561
+++G GGFG VY+ + G VAVK D + + E + H N+
Sbjct: 10 TLEEIIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ L G C + N LV EF + G L++ + D +++W A+ A+G+ Y H
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLH 122
Query: 622 EQCRNRIIHCDIKPENILLDE--------NFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
++ IIH D+K NIL+ + N K++DFGLA+ H G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYA 179
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGR 705
++APE + + +DV+SYG+LL E++ G
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE-------KEFVTEVNTIGSMH 557
+ + +G GGFG V+KG L D ++VA+K L GE +EF EV + +++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+V+L G +V EF+ G L + H + W+ + + + A GI
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 618 AYFHEQCRNRIIHCDIKPENILL---DEN--FCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
Y Q I+H D++ NI L DEN C KV+DFGL++ + V+ + G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNF 190
Query: 673 GYLAPEWV--SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730
++APE + T KAD YS+ M+L I+ G G +++ Y F M
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG------EGPFDEYSYGKIKFINM--- 241
Query: 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ + L + E+ R V C + RP +VK L
Sbjct: 242 ----IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E+M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL +++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G FG V+ D LVAVK L + K+F E + ++ H ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV----------LDWTTRFNIAIATA 614
G C EG ++V+E+MK+G L+K F H D V L + +IA A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNK--FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRG 673
G+ Y Q +H D+ N L+ EN K+ DFG+++ + ++ +V
Sbjct: 139 AGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE + R T ++DV+S G++L EI
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 484 NSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHG 542
N V G N+ +++ LG G +G VY+G +L VAVK L
Sbjct: 240 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 299
Query: 543 EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD 602
E EF+ E + + H NLV+L G C+ ++ EFM G+L ++ +R V +
Sbjct: 300 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEV-N 355
Query: 603 WTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662
+A + + Y + IH ++ N L+ EN KV+DFGL++LM +
Sbjct: 356 AVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 412
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722
+ + APE ++ ++K+DV+++G+LL EI MS YPG
Sbjct: 413 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGI 462
Query: 723 AFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 463 DLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 513
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
+++ I Q++G G FG V G L VA+K L ++ +F++E +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++ L G ++ + +++ EFM+NGSLD ++ D +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGMLRG 117
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGT 671
A G+ Y + +H + NIL++ N KVSDFGL++ + + S T G
Sbjct: 118 IAAGMKYLADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 672 R---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEM 727
+ + APE + R T +DV+SYG+++ E++ G R P W +M
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-------------PYW---DM 218
Query: 728 TNGTPLKV--ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
TN + D RL ++ + + + W Q + RP G++V L+
Sbjct: 219 TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW--QKDRNHRPKFGQIVNTLD 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 484 NSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHG 542
N V G N+ +++ LG G +G VY+G +L VAVK L
Sbjct: 198 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 257
Query: 543 EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD 602
E EF+ E + + H NLV+L G C+ ++ EFM G+L ++ +R V +
Sbjct: 258 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEV-N 313
Query: 603 WTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662
+A + + Y + IH ++ N L+ EN KV+DFGL++LM +
Sbjct: 314 AVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 370
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722
+ + APE ++ ++K+DV+++G+LL EI MS YPG
Sbjct: 371 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGI 420
Query: 723 AFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 421 DLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 471
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEKE---FVTEV 550
++L +++G G FG V G L VA+K L + + EK+ F+ E
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK--VGYTEKQRRDFLCEA 95
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
+ +G H N+V L G + G ++V EFM+NG+LD ++ D +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL----RKHDGQFTVIQLVGML 151
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + V T G
Sbjct: 152 RGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 671 T--RGYLAPEWVSNRPITVKADVYSYGMLLLEIV--GGRRNLDMS 711
+ APE + R T +DV+SYG+++ E++ G R DMS
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G FG V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 66
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 67 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 122
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH +++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 123 E--RN-YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 179
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 180 YGTFTIKSDVWSFGILLTEIV 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 127/305 (41%), Gaps = 41/305 (13%)
Query: 484 NSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHG 542
N + G N+ +++ LG G +G VY+G +L VAVK L
Sbjct: 201 NKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 260
Query: 543 EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD 602
E EF+ E + + H NLV+L G C+ ++ EFM G+L LD
Sbjct: 261 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL--------------LD 305
Query: 603 WTTRFNIAIATAQGIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLA 654
+ N +A + Y Q + IH ++ N L+ EN KV+DFGL+
Sbjct: 306 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDA 714
+LM + + + APE ++ ++K+DV+++G+LL EI MS
Sbjct: 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP-- 419
Query: 715 EDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEV 773
YPG ++ R EG E+ ELMRA C Q RPS E+
Sbjct: 420 ----YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEI 469
Query: 774 VKMLE 778
+ E
Sbjct: 470 HQAFE 474
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHHMNL 561
T + LG G G V+ G T VAVK L + + P F+ E N + + H L
Sbjct: 14 TLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRL 70
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
VRL ++ ++ E+M+NGSL ++ + L ++A A+G+A+
Sbjct: 71 VRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIE 126
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
E RN IH D++ NIL+ + K++DFGLA+L+ + + APE ++
Sbjct: 127 E--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 682 NRPITVKADVYSYGMLLLEIV 702
T+K+DV+S+G+LL EIV
Sbjct: 184 YGTFTIKSDVWSFGILLTEIV 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E M+NGSLD ++ D +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGMLRG 126
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + T TR
Sbjct: 127 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 179
Query: 673 G------YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFK 725
G + +PE ++ R T +DV+SYG++L E++ G R P W
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW--- 223
Query: 726 EMTNGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
EM+N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 224 EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 276
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNT 552
++L + +++G G FG V G L VA+K L ++ +F+ E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+G H N++RL G ++ ++V E M+NGSLD ++ D +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQLVGMLRG 155
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
A G+ Y + +H D+ NIL++ N KVSDFGL++++ + + RG +
Sbjct: 156 IASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGK 211
Query: 673 ---GYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728
+ +PE ++ R T +DV+SYG++L E++ G R P W EM+
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-------------PYW---EMS 255
Query: 729 NGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
N +K D RL ++ + + + W Q + RP ++V +L+
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 53/303 (17%)
Query: 507 FAQLLGTGGFGSVYKGSL------GDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHHM 559
+ LG G FG V K + T VAVK L + P ++ ++E N + ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSL------DKWIFPSY-------------HHRDRV 600
++++L G CS+ LL+ E+ K GSL + + P Y H +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 601 LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
L + A +QG+ Y E +++H D+ NIL+ E K+SDFGL++ + E
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPI-----TVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
S V+ ++G + +W++ + T ++DV+S+G+LL EIV + G+
Sbjct: 204 DSX----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV------TLGGNP- 252
Query: 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775
YPG + + N LK R EE+ R M C + E RP ++ K
Sbjct: 253 ---YPGIPPERLFN--LLKTGHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISK 304
Query: 776 MLE 778
LE
Sbjct: 305 DLE 307
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 59
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L ++ +R V +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEV-NAVVLLY 116
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMV 668
+A + + Y + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 117 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMT 728
+ + APE ++ ++K+DV+++G+LL EI MS YPG ++
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDLSQVY 223
Query: 729 NGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 268
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 484 NSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHG 542
+L G+P N+ +++ LG G +G VY+G +L VAVK L
Sbjct: 8 ENLYFQGSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 66
Query: 543 EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD 602
E EF+ E + + H NLV+L G C+ ++ EFM G+L ++ +R V +
Sbjct: 67 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEV-N 122
Query: 603 WTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662
+A + + Y + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 123 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 179
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722
+ + APE ++ ++K+DV+++G+LL EI MS YPG
Sbjct: 180 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGI 229
Query: 723 AFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 230 DLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 199 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 249 LMRA------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 59
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L ++ +R V +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLY 116
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMV 668
+A + + Y + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 117 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMT 728
+ + APE ++ ++K+DV+++G+LL EI MS YPG ++
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDLSQVY 223
Query: 729 NGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 199 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 249 LMRA------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G+P N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L LD+ N
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL--------------LDYLRECN 104
Query: 609 IAIATAQGIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
+A + Y Q + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720
+ + APE ++ ++K+DV+++G+LL EI MS YP
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YP 214
Query: 721 GWAFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G ++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G+P N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L LD+ N
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL--------------LDYLRECN 104
Query: 609 IAIATAQGIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
+A + Y Q + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720
+ + APE ++ ++K+DV+++G+LL EI MS YP
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YP 214
Query: 721 GWAFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G ++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 53/303 (17%)
Query: 507 FAQLLGTGGFGSVYKGSL------GDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHHM 559
+ LG G FG V K + T VAVK L + P ++ ++E N + ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSL------DKWIFPSY-------------HHRDRV 600
++++L G CS+ LL+ E+ K GSL + + P Y H +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 601 LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
L + A +QG+ Y E +++H D+ NIL+ E K+SDFGL++ + E
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPI-----TVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
S V+ ++G + +W++ + T ++DV+S+G+LL EIV + G+
Sbjct: 204 DS----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV------TLGGNP- 252
Query: 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775
YPG + + N LK R EE+ R M C + E RP ++ K
Sbjct: 253 ---YPGIPPERLFN--LLKTGHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISK 304
Query: 776 MLE 778
LE
Sbjct: 305 DLE 307
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 39/287 (13%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE-------KEFVTEVNTIGSMH 557
+ + +G GGFG V+KG L D ++VA+K L GE +EF EV + +++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+V+L G +V EF+ G L + H + W+ + + + A GI
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 618 AYFHEQCRNRIIHCDIKPENILL---DEN--FCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
Y Q I+H D++ NI L DEN C KV+DFG ++ + V+ + G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNF 190
Query: 673 GYLAPEWV--SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730
++APE + T KAD YS+ M+L I+ G G +++ Y F M
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG------EGPFDEYSYGKIKFINM--- 241
Query: 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ + L + E+ R V C + RP +VK L
Sbjct: 242 ----IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 511 LGTGGFGSVYKGSLGDGTL----VAVKKLDRVLPHGEKE-----FVTEVNTIGSMHHMNL 561
LG GG +VY L + T+ VA+K + +P EKE F EV+ + H N+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAI--FIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
V + E LV E+++ +L ++I L T N GI + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ RI+H DIKP+NIL+D N K+ DFG+AK + V GT Y +PE
Sbjct: 129 DM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 682 NRPITVKADVYSYGMLLLEIVGGR 705
D+YS G++L E++ G
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 199 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 249 LMRA------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G+P N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L LD+ N
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL--------------LDYLRECN 104
Query: 609 IAIATAQGIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
+A + Y Q + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720
+ + APE ++ ++K+DV+++G+LL EI MS YP
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YP 214
Query: 721 GWAFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G ++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVT 548
G+P N+ +++ LG G +G VY+G +L VAVK L E EF+
Sbjct: 1 GSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H NLV+L G C+ ++ EFM G+L LD+ N
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL--------------LDYLRECN 104
Query: 609 IAIATAQGIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
+A + Y Q + IH D+ N L+ EN KV+DFGL++LM +
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720
+ + APE ++ ++K+DV+++G+LL EI MS YP
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----TYGMSP------YP 214
Query: 721 GWAFKEMTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G ++ R EG E+ ELMRA C Q RPS E+ + E
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 84 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 137
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 198 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 247
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 248 LMRA------CWQWNPSDRPSFAEIHQAFE 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 39/287 (13%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE-------KEFVTEVNTIGSMH 557
+ + +G GGFG V+KG L D ++VA+K L GE +EF EV + +++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+V+L G +V EF+ G L + H + W+ + + + A GI
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 618 AYFHEQCRNRIIHCDIKPENILL---DEN--FCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
Y Q I+H D++ NI L DEN C KV+DF L++ + V+ + G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNF 190
Query: 673 GYLAPEWV--SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730
++APE + T KAD YS+ M+L I+ G G +++ Y F M
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG------EGPFDEYSYGKIKFINM--- 241
Query: 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ + L + E+ R V C + RP +VK L
Sbjct: 242 ----IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 53/303 (17%)
Query: 507 FAQLLGTGGFGSVYKGSL------GDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHHM 559
+ LG G FG V K + T VAVK L + P ++ ++E N + ++H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSL------DKWIFPSY-------------HHRDRV 600
++++L G CS+ LL+ E+ K GSL + + P Y H +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 601 LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
L + A +QG+ Y E ++H D+ NIL+ E K+SDFGL++ + E
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 661 HSQVVTMVRGTRGYLAPEWVSNRPI-----TVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
S V+ ++G + +W++ + T ++DV+S+G+LL EIV + G+
Sbjct: 204 DSX----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV------TLGGNP- 252
Query: 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775
YPG + + N LK R EE+ R M C + E RP ++ K
Sbjct: 253 ---YPGIPPERLFN--LLKTGHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISK 304
Query: 776 MLE 778
LE
Sbjct: 305 DLE 307
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 194 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 244 LMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 196 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 245
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 246 LMRA------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 85 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 199 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 248
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 249 LMRA------CWQWNPSDRPSFAEIHQAFE 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 497 YRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM 556
Y+++++ +++G G FG V K VA+K+++ K F+ E+ + +
Sbjct: 8 YKEIEVE-----EVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRV 59
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPS----YHHRDRVLDWTTRFNIAIA 612
+H N+V+L G C + LV E+ + GSL + + Y+ + W +
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQ 111
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFGLAKLMGREHSQVVTMVRGT 671
+QG+AY H +IH D+KP N+LL K+ DFG A + +T +G+
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGS 167
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + K DV+S+G++L E++ R+ D G F WA T
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWAVHNGTRPP 225
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+K + +E + C + RPSM E+VK++
Sbjct: 226 LIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIM 259
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 194 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 244 LMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 11 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 121
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 122 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 54/309 (17%)
Query: 495 FTYRDLQIRTSNFAQ-----------LLGTGGFGSVYKGSLG----DGTLVAVKKLDRVL 539
FT+ D FA+ ++G G FG V G L VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 540 PHGEK-EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD 598
++ +F++E + +G H N++ L G ++ +++ E+M+NGSLD ++ D
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL----RKND 125
Query: 599 RVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658
+ G+ Y + +H D+ NIL++ N KVSDFG+++++
Sbjct: 126 GRFTVIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 659 REHSQVVTMVRGTRG------YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMS 711
+ T TRG + APE ++ R T +DV+SYG+++ E++ G R
Sbjct: 183 DDPEAAYT----TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER----- 233
Query: 712 GDAEDFFYPGWAFKEMTNGTPLKVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPS 769
P W +M+N +K + RL ++ + + + W Q E RP
Sbjct: 234 --------PYW---DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPK 280
Query: 770 MGEVVKMLE 778
G++V ML+
Sbjct: 281 FGQIVNMLD 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F + LG G FGSV L D G +VAVKKL ++F
Sbjct: 7 PTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ EF+ GSL +++ H++R+ D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERI-DHI 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 35 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 145
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 146 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 202
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 119/278 (42%), Gaps = 41/278 (14%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----- 624
++ EFM G+L LD+ N +A + Y Q
Sbjct: 85 REPPFYIITEFMTYGNL--------------LDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 625 ---RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ IH D+ N L+ EN KV+DFGL++LM + + + APE ++
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++K+DV+++G+LL EI MS YPG ++ R E
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPE 240
Query: 742 GAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G E+ ELMRA C Q RPS E+ + E
Sbjct: 241 GCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 196 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 245
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 246 LMRA------CWQWNPSDRPSFAEIHQAFE 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 10 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 121 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 177
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 9 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 120 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 176
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 114
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 115 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EFM G+L ++ +R V + +A + + Y + I
Sbjct: 82 REPPFYIITEFMTYGNLLDYLREC--NRQEV-NAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+ N L+ EN KV+DFGL++LM + + + APE ++ ++K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 690 DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE-EE 748
DV+++G+LL EI MS YPG ++ R EG E+ E
Sbjct: 196 DVWAFGVLLWEIA----TYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYE 245
Query: 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
LMRA C Q RPS E+ + E
Sbjct: 246 LMRA------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 2 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 112
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 113 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 169
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 3 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 113
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 114 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 170
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 114
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 115 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 497 YRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM 556
Y+++++ +++G G FG V K VA+K+++ K F+ E+ + +
Sbjct: 7 YKEIEVE-----EVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRV 58
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPS----YHHRDRVLDWTTRFNIAIA 612
+H N+V+L G C + LV E+ + GSL + + Y+ + W +
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQ 110
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFGLAKLMGREHSQVVTMVRGT 671
+QG+AY H +IH D+KP N+LL K+ DFG A + +T +G+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGS 166
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + K DV+S+G++L E++ R+ D G F WA T
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWAVHNGTRPP 224
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+K + +E + C + RPSM E+VK++
Sbjct: 225 LIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIM 258
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 8 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 118
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 119 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 506 NFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMN 560
+++G G FG V G L VA+K L ++ +F++E + +G H N
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF 620
++ L G ++ +++ E+M+NGSLD ++ D + G+ Y
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFL----RKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG------Y 674
+ +H D+ NIL++ N KVSDFG+++++ + T TRG +
Sbjct: 127 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRW 179
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIV--GGRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732
APE ++ R T +DV+SYG+++ E++ G R DMS K + G
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VIKAIEEGYR 231
Query: 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
L ++ + +LM C Q E RP G++V ML+
Sbjct: 232 LPPP---MDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 506 NFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMN 560
+++G G FG V G L VA+K L ++ +F++E + +G H N
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF 620
++ L G ++ +++ E+M+NGSLD ++ D + G+ Y
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFL----RKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG------Y 674
+ +H D+ NIL++ N KVSDFG+++++ + T TRG +
Sbjct: 133 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRW 185
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733
APE ++ R T +DV+SYG+++ E++ G R P W +M+N +
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER-------------PYW---DMSNQDVI 229
Query: 734 KVADR--RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
K + RL ++ + + + W Q E RP G++V ML+
Sbjct: 230 KAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 274
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA--- 614
H N+V L G C+ G L++ E+ G L ++ + RVL+ F IA +TA
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL----RRKSRVLETDPAFAIANSTASTR 164
Query: 615 ----------QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQ 663
QG+A+ + IH D+ N+LL K+ DFGLA+ +M +
Sbjct: 165 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
V R ++APE + + TV++DV+SYG+LL EI
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 114
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 115 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF 171
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 119/278 (42%), Gaps = 41/278 (14%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----- 624
++ EFM G+L LD+ N +A + Y Q
Sbjct: 78 REPPFYIITEFMTYGNL--------------LDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 625 ---RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ IH D+ N L+ EN KV+DFGL++LM + + + APE ++
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++K+DV+++G+LL EI MS YPG ++ R E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDPSQVYELLEKDYRMERPE 233
Query: 742 GAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G E+ ELMRA C Q RPS E+ + E
Sbjct: 234 GCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 265
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT---- 613
H N+V L G C+ G L++ E+ G L ++ + RVL+ F IA +T
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL----RRKSRVLETDPAFAIANSTLSTR 164
Query: 614 ---------AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQ 663
AQG+A+ + IH D+ N+LL K+ DFGLA+ +M +
Sbjct: 165 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
V R ++APE + + TV++DV+SYG+LL EI
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 119/278 (42%), Gaps = 41/278 (14%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----- 624
++ EFM G+L LD+ N +A + Y Q
Sbjct: 78 REPPFYIIIEFMTYGNL--------------LDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 625 ---RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ IH D+ N L+ EN KV+DFGL++LM + + + APE ++
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++K+DV+++G+LL EI MS YPG ++ R E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDPSQVYELLEKDYRMERPE 233
Query: 742 GAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G E+ ELMRA C Q RPS E+ + E
Sbjct: 234 GCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 52/299 (17%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKE----FVTEVNTIGSM-HHMN 560
F ++G G FG V K + L + R+ + K+ F E+ + + HH N
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA-----Q 615
++ L G C L E+ +G+L ++ + RVL+ F IA +TA Q
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-----RKSRVLETDPAFAIANSTASTLSSQ 132
Query: 616 GIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667
+ +F + + IH D+ NIL+ EN+ K++DFGL++ G+E TM
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTM 190
Query: 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEM 727
R ++A E ++ T +DV+SYG+LL EIV + G Y G E+
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTP----YCGMTCAEL 240
Query: 728 TNGTPLKVADRRLEGAV----EEEELMRAMKVAFWCIQDEVFMRPSMGEVV----KMLE 778
P RLE + E +LMR C +++ + RPS +++ +MLE
Sbjct: 241 YEKLP---QGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 290
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 334 -EPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 386
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 691 VYSYGMLLLEIV 702
V+S+G+LL E+
Sbjct: 447 VWSFGILLTELT 458
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 5 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H++R+ D
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHI 115
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH ++ NIL++ K+ DFGL K++ +E+
Sbjct: 116 KLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 486 LIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV---YKGSLGD--GTLVAVKKLDRVLP 540
L C P F R L+ + LG G FGSV LGD G LVAVK+L P
Sbjct: 11 LYACQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP 65
Query: 541 HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL---LVYEFMKNGSLDKWIFPSYHHR 597
+++F E+ + ++H +V+ G S G R LV E++ +G L ++ HR
Sbjct: 66 DQQRDFQREIQILKALHSDFIVKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFL---QRHR 121
Query: 598 DRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657
R LD + + +G+ Y + R +H D+ NIL++ K++DFGLAKL+
Sbjct: 122 AR-LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177
Query: 658 GREHSQVVTMVRGTRG--YLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ V G + APE +S+ + ++DV+S+G++L E+
Sbjct: 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 52/299 (17%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKE----FVTEVNTIGSM-HHMN 560
F ++G G FG V K + L + R+ + K+ F E+ + + HH N
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA-----Q 615
++ L G C L E+ +G+L ++ + RVL+ F IA +TA Q
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-----RKSRVLETDPAFAIANSTASTLSSQ 142
Query: 616 GIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667
+ +F + + IH D+ NIL+ EN+ K++DFGL++ G+E TM
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTM 200
Query: 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEM 727
R ++A E ++ T +DV+SYG+LL EIV + G Y G E+
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTP----YCGMTCAEL 250
Query: 728 TNGTPLKVADRRLEGAV----EEEELMRAMKVAFWCIQDEVFMRPSMGEVV----KMLE 778
P RLE + E +LMR C +++ + RPS +++ +MLE
Sbjct: 251 YEKLP---QGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 503 RTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
R F Q LG G FGSV L D G +VAVKKL ++F E+ + S+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 558 HMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H N+V+ G C R L+ E++ GSL ++ H++R+ D +
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHIKLLQYTSQICK 143
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTRG 673
G+ Y + R IH D+ NIL++ K+ DFGL K++ +E +V
Sbjct: 144 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ APE ++ +V +DV+S+G++L E+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 503 RTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
R F Q LG G FGSV L D G +VAVKKL ++F E+ + S+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 558 HMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H N+V+ G C R L+ E++ GSL ++ H++R+ D +
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERI-DHIKLLQYTSQICK 143
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTRG 673
G+ Y + R IH D+ NIL++ K+ DFGL K++ +E +V
Sbjct: 144 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ APE ++ +V +DV+S+G++L E+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK---GSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ F Q LG G FGSV L D G +VAVKKL ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E+ + S+ H N+V+ G C R L+ E++ GSL ++ H +R+ D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERI-DHI 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHS 662
+G+ Y + R IH D+ NIL++ K+ DFGL K++ +E
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+V + APE ++ +V +DV+S+G++L E+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 251 -EPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 691 VYSYGMLLLEIVGGRR 706
V+S+G+LL E+ R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 251 -EPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 691 VYSYGMLLLEIVGGRR 706
V+S+G+LL E+ R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 75 -EPIXIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 188 VWSFGILLTEL 198
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G FG V+ D LVAVK L K+F E + ++ H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV-------------LDWTTRFNIAI 611
G C +G ++V+E+MK+G L+K F H D + L + +IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNK--FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRG 670
A G+ Y Q +H D+ N L+ N K+ DFG+++ + ++ +V
Sbjct: 141 QIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 671 TRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE + R T ++DV+S+G++L EI
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 489 CGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV---YKGSLGD--GTLVAVKKLDRVLPHGE 543
C P F R L+ + LG G FGSV LGD G LVAVK+L P +
Sbjct: 1 CQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ 55
Query: 544 KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR---LLVYEFMKNGSLDKWIFPSYHHRDRV 600
++F E+ + ++H +V+ G S G R LV E++ +G L ++ HR R
Sbjct: 56 RDFQREIQILKALHSDFIVKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRAR- 110
Query: 601 LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660
LD + + +G+ Y + R +H D+ NIL++ K++DFGLAKL+ +
Sbjct: 111 LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 167
Query: 661 HSQVVTMVRGTRG--YLAPEWVSNRPITVKADVYSYGMLLLEI 701
V G + APE +S+ + ++DV+S+G++L E+
Sbjct: 168 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 119/278 (42%), Gaps = 41/278 (14%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY+G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----- 624
++ EFM G+L LD+ N +A + Y Q
Sbjct: 78 REPPFYIITEFMTYGNL--------------LDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 625 ---RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ IH D+ N L+ EN KV+DFGL++LM + + + APE ++
Sbjct: 124 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++K+DV+++G+LL EI MS YPG ++ R E
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIA----TYGMSP------YPGIDPSQVYELLEKDYRMERPE 233
Query: 742 GAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
G E+ ELMRA C Q RPS E+ + E
Sbjct: 234 GCPEKVYELMRA------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 78 -EPIYIVTEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 191 VWSFGILLTEL 201
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 251 -EPIYIVGEYMSKGSLLDFL---KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 691 VYSYGMLLLEIVGGRR 706
V+S+G+LL E+ R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 74 -EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 187 VWSFGILLTEL 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 76 -EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 189 VWSFGILLTEL 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVCEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ R L ++A A G+AY R IH
Sbjct: 76 -EPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ K++DFGLA+L+ + + APE T+K+D
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 691 VYSYGMLLLEIVGGRR 706
V+S+G+LL E+V R
Sbjct: 189 VWSFGILLTELVTKGR 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 52/299 (17%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKE----FVTEVNTIGSM-HHMN 560
F ++G G FG V K + L + R+ + K+ F E+ + + HH N
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA-----Q 615
++ L G C L E+ +G+L ++ + RVL+ F IA +TA Q
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-----RKSRVLETDPAFAIANSTASTLSSQ 139
Query: 616 GIAYFHEQC--------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667
+ +F + + IH ++ NIL+ EN+ K++DFGL++ G+E TM
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTM 197
Query: 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEM 727
R ++A E ++ T +DV+SYG+LL EIV + G Y G E+
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTP----YCGMTCAEL 247
Query: 728 TNGTPLKVADRRLEGAV----EEEELMRAMKVAFWCIQDEVFMRPSMGEVV----KMLE 778
P RLE + E +LMR C +++ + RPS +++ +MLE
Sbjct: 248 YEKLP---QGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 297
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 511 LGTGGFGSVYKG------SLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + VAVK L H E + ++E+ + + HH+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYHHRDRVLDWTTRFNI---AIA 612
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VRGT 671
A+G+ + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE----- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFCRR 263
Query: 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 264 LKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L +++ A G+AY R +H
Sbjct: 82 -EPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 195 VWSFGILLTEL 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D+ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 494 NFTYRDLQIRTSNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDR-VLPHGEKEFVT 548
+FT R+++ + +++G+G G V G L VA+K L ++F++
Sbjct: 41 SFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + +G H N++RL G + G ++V E+M+NGSLD ++ D
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVG 155
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMV 668
+ G+ Y + +H D+ N+L+D N KVSDFGL++++ + T
Sbjct: 156 MLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 669 RGT--RGYLAPEWVSNRPITVKADVYSYGMLLLEIVG 703
G + APE ++ R + +DV+S+G+++ E++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 494 NFTYRDLQIRTSNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDR-VLPHGEKEFVT 548
+FT R+++ + +++G+G G V G L VA+K L ++F++
Sbjct: 41 SFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + +G H N++RL G + G ++V E+M+NGSLD ++ D
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVG 155
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMV 668
+ G+ Y + +H D+ N+L+D N KVSDFGL++++ + T
Sbjct: 156 MLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 669 RGT--RGYLAPEWVSNRPITVKADVYSYGMLLLEIVG 703
G + APE ++ R + +DV+S+G+++ E++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 503 RTSNFAQLLGTGGFGSV---YKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
R + LG G FGSV LGD G LVAVK+L P +++F E+ + ++H
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 558 HMNLVRLCGYCSEGSNR---LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
+V+ G S G R LV E++ +G L ++ HR R LD + +
Sbjct: 67 SDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFL---QRHRAR-LDASRLLLYSSQIC 121
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG- 673
+G+ Y + R +H D+ NIL++ K++DFGLAKL+ + V G
Sbjct: 122 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 674 -YLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ APE +S+ + ++DV+S+G++L E+
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568
LG G FG V+ G+ T VA+K L + P F+ E + + H LV+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAVV 249
Query: 569 SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRI 628
SE +V E+M GSL ++ + L ++A A G+AY R
Sbjct: 250 SE-EPIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 302
Query: 629 IHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVK 688
+H D++ NIL+ EN KV+DFGL +L+ + + APE T+K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 689 ADVYSYGMLLLEIV 702
+DV+S+G+LL E+
Sbjct: 363 SDVWSFGILLTELT 376
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M GSL ++ + L +++ A G+AY R +H
Sbjct: 82 -EPIYIVTEYMNKGSLLDFL---KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 195 VWSFGILLTEL 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 14/195 (7%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ + T VAVK + + + F+ E N + ++ H LV+L ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 571 GSNRLLVYEFMKNGSLDKWIFP---SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
++ EFM GSL ++ S +++D++ + A+G+A+ + RN
Sbjct: 255 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQ--RN- 304
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH D++ NIL+ + K++DFGLA+++ + + APE ++ T+
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 688 KADVYSYGMLLLEIV 702
K+DV+S+G+LL+EIV
Sbjct: 365 KSDVWSFGILLMEIV 379
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 14/195 (7%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ + T VAVK + + + F+ E N + ++ H LV+L ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 571 GSNRLLVYEFMKNGSLDKWIFP---SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
++ EFM GSL ++ S +++D++ + A+G+A+ + RN
Sbjct: 82 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQ--RN- 131
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH D++ NIL+ + K++DFGLA+++ + + APE ++ T+
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 688 KADVYSYGMLLLEIV 702
K+DV+S+G+LL+EIV
Sbjct: 192 KSDVWSFGILLMEIV 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M G L ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVMEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ G+ T VA+K L E F+ E + + H LV+L SE
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIH 630
+V E+M G L ++ + L ++A A G+AY R +H
Sbjct: 85 -EPIYIVTEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 631 CDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKAD 690
D++ NIL+ EN KV+DFGLA+L+ + + APE T+K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 691 VYSYGMLLLEI 701
V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 118/281 (41%), Gaps = 47/281 (16%)
Query: 511 LGTGGFGSVYKGSLGDGTL-VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +G VY G +L VAVK L E EF+ E + + H NLV+L G C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----- 624
+V E+M G+L LD+ N TA + Y Q
Sbjct: 99 LEPPFYIVTEYMPYGNL--------------LDYLRECNREEVTAVVLLYMATQISSAME 144
Query: 625 ---RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+ IH D+ N L+ EN KV+DFGL++LM + + + APE ++
Sbjct: 145 YLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 682 NRPITVKADVYSYGMLLLEI----VGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737
++K+DV+++G+LL EI + +D+S D G+ E G P KV
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYDLLEKGYRM-EQPEGCPPKVY- 261
Query: 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
ELMRA C + RPS E + E
Sbjct: 262 ----------ELMRA------CWKWSPADRPSFAETHQAFE 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 19/224 (8%)
Query: 504 TSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEF-VTEVNTIGSMHHM 559
+S F QL LG G + +VYKG + G VA+K++ G + E++ + + H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
N+VRL + LV+EFM N L K++ + + R L+ QG+A
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE----HSQVVTMVRGTRGY 674
+ HE N+I+H D+KP+N+L+++ K+ DFGLA+ G S+VVT+ Y
Sbjct: 123 FCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL-----WY 174
Query: 675 LAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
AP+ + +R + D++S G +L E++ G+ + D E
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSV---YKGSLGD--GTLVAVKKLDRVLPHGEKEF 546
P F R L+ + LG G FGSV LGD G LVAVK+L P +++F
Sbjct: 5 PTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 59
Query: 547 VTEVNTIGSMHHMNLVRLCGYCSEGSNR---LLVYEFMKNGSLDKWIFPSYHHRDRVLDW 603
E+ + ++H +V+ G S G R LV E++ +G L ++ HR R LD
Sbjct: 60 QREIQILKALHSDFIVKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRAR-LDA 114
Query: 604 TTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663
+ + +G+ Y + R +H D+ NIL++ K++DFGLAKL+ +
Sbjct: 115 SRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 664 VVTMVRGTRG--YLAPEWVSNRPITVKADVYSYGMLLLEI 701
V G + APE +S+ + ++DV+S+G++L E+
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 30/229 (13%)
Query: 506 NFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
+ LGTGGFG V + D G VA+K+ + L P + + E+ + ++H N+V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 564 LCGYCSEGSNRL-------LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+G +L L E+ + G L K++ + + + + R ++ ++
Sbjct: 77 -AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISS-A 133
Query: 617 IAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
+ Y HE NRIIH D+KPENI+L + K+ D G AK + + ++ T GT
Sbjct: 134 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 188
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722
YLAPE + + TV D +S+G L E + G R F P W
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----------FLPNW 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 30/229 (13%)
Query: 506 NFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
+ LGTGGFG V + D G VA+K+ + L P + + E+ + ++H N+V
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 564 LCGYCSEGSNRL-------LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+G +L L E+ + G L K++ + + + + R ++ ++
Sbjct: 78 -AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISS-A 134
Query: 617 IAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
+ Y HE NRIIH D+KPENI+L + K+ D G AK + + ++ T GT
Sbjct: 135 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 189
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722
YLAPE + + TV D +S+G L E + G R F P W
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----------FLPNW 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTR 606
H N+V L G C+ G L++ E+ G L ++ + H+ + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 607 FNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVV 665
+ + AQG+A+ IH D+ N+LL K+ DFGLA+ +M + V
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 666 TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
R ++APE + + TV++DV+SYG+LL EI
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 47/297 (15%)
Query: 506 NFAQLLGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-H 557
N + LG G FG V + + G D T VAVK L H E + ++E+ + + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 558 HMNLVRLCGYCSE-GSNRLLVYEFMKNGSLDKWI-------FPSYHHRDRVLDWTTRFNI 609
H+N+V L G C++ G +++ EF K G+L ++ P D D+ T ++
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 610 ---AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 667 M-VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFK 725
R ++APE + +R T+++DV+S+G+LL EI +L S YPG
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKID 257
Query: 726 E-----MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
E + GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 258 EEFCRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 44/294 (14%)
Query: 506 NFAQLLGTGGFGSVYKG------SLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-H 557
N + LG G FG V + VAVK L H E + ++E+ + + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 558 HMNLVRLCGYCSE-GSNRLLVYEFMKNGSLDKWIFPSYH----HRDRVLDWTTRFNI--- 609
H+N+V L G C++ G +++ EF K G+L ++ + ++D D+ T ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 256
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 257 XRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVRL 564
+ +G G FG V+ G L D TLVAVK LP K +F+ E + H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G C++ +V E ++ G ++ + R RV T + A G+ Y +C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRV---KTLLQMVGDAAAGMEYLESKC 233
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG-----TRGYLAPEW 679
IH D+ N L+ E K+SDFG M RE + V G + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEA 286
Query: 680 VSNRPITVKADVYSYGMLLLE 700
++ + ++DV+S+G+LL E
Sbjct: 287 LNYGRYSSESDVWSFGILLWE 307
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYH-----HRDRVLDWTTRFNIAIA 612
H N+V L G C+ G L++ E+ G L ++ R L+ + +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGT 671
AQG+A+ IH D+ N+LL K+ DFGLA+ +M + V R
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++APE + + TV++DV+SYG+LL EI
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 32/257 (12%)
Query: 470 YNVHRKRFLKRAVENSLIVCGAPVNFTYRDLQI--------RTSNFAQLLGTGGFGSVY- 520
Y HRKR R L P F+ D+ + ++ LG G FG VY
Sbjct: 6 YVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYE 65
Query: 521 ---KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574
KG + D T VA+K ++ E+ EF+ E + + + ++VRL G S+G
Sbjct: 66 GVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 125
Query: 575 LLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIAYFHEQCRNRII 629
L++ E M G L ++ + VL + +A A G+AY + N+ +
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFV 182
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI---- 685
H D+ N ++ E+F K+ DFG M R+ + +G +G L W+S +
Sbjct: 183 HRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV 238
Query: 686 -TVKADVYSYGMLLLEI 701
T +DV+S+G++L EI
Sbjct: 239 FTTYSDVWSFGVVLWEI 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYH-----HRDRVLDWTTRFNIAIA 612
H N+V L G C+ G L++ E+ G L ++ R L+ + +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGT 671
AQG+A+ IH D+ N+LL K+ DFGLA+ +M + V R
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++APE + + TV++DV+SYG+LL EI
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 44/294 (14%)
Query: 506 NFAQLLGTGGFGSVYKG------SLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-H 557
N + LG G FG V + VAVK L H E + ++E+ + + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 558 HMNLVRLCGYCSE-GSNRLLVYEFMKNGSLDKWIFPSYH----HRDRVLDWTTRFNI--- 609
H+N+V L G C++ G +++ EF K G+L ++ + ++D D+ T ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 256
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 257 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG- 566
+L+G+GGFG V+K DG +K RV + EK EV + + H+N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIK---RVKYNNEKA-EREVKALAKLDHVNIVHYNGC 72
Query: 567 -----YCSEGSNR----------LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
Y E S++ + EF G+L++WI R LD +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRGEKLDKVLALELFE 129
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT 671
+G+ Y H + ++I+ D+KP NI L + K+ DFGL + + + + +GT
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGT 184
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
Y++PE +S++ + D+Y+ G++L E++
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVRL 564
+ +G G FG V+ G L D TLVAVK LP K +F+ E + H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G C++ +V E ++ G ++ + R RV T + A G+ Y +C
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRV---KTLLQMVGDAAAGMEYLESKC 233
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG-----TRGYLAPEW 679
IH D+ N L+ E K+SDFG M RE + V G + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 680 VSNRPITVKADVYSYGMLLLE 700
++ + ++DV+S+G+LL E
Sbjct: 287 LNYGRYSSESDVWSFGILLWE 307
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 494 NFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDR--VLPHGEKEFVTEV 550
++ +D QI + LGTG FG V+ S +G A+K L + V+ + E +
Sbjct: 2 KYSLQDFQI-----LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE 56
Query: 551 NTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
+ S+ H ++R+ G + ++ ++++ G L F R + +F
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKF-Y 111
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
A + Y H + II+ D+KPENILLD+N K++DFG AK + V +
Sbjct: 112 AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLC 164
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
GT Y+APE VS +P D +S+G+L+ E++ G
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Query: 472 VHRKRFLKRAVENSLIV------CGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-L 524
+ RKR L+R ++ +V AP R L+ ++LG+G FG+VYKG +
Sbjct: 12 IVRKRTLRRLLQERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI 71
Query: 525 GDGTLV----AVKKL-DRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579
+G V A+ +L + P KE + E + S+ + ++ RL G C + +L+ +
Sbjct: 72 PEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-Q 130
Query: 580 FMKNGSLDKWIFPSYHHRDRV-----LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIK 634
M G L ++ H+D + L+W + A+G+ Y ++ R++H D+
Sbjct: 131 LMPFGCLLDYV---REHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLA 178
Query: 635 PENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---GYLAPEWVSNRPITVKADV 691
N+L+ K++DFGLAKL+G E + G + ++A E + +R T ++DV
Sbjct: 179 ARNVLVKTPQHVKITDFGLAKLLGAEEKEY--HAEGGKVPIKWMALESILHRIYTHQSDV 236
Query: 692 YSYGMLLLEIV 702
+SYG+ + E++
Sbjct: 237 WSYGVTVWELM 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 4 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 63
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV---REHKDNIGS-Q 118
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 119 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 176 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G FG V+ D LVAVK L ++F E + + H ++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV------------LDWTTRFNIAIA 612
G C+EG L+V+E+M++G L++ F H D L +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGT 671
A G+ Y +H D+ N L+ + K+ DFG+++ + ++ +V
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE + R T ++DV+S+G++L EI
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 7 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 66
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 121
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 122 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 179 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 4 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 63
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 118
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 119 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 176 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 147 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVR 199
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 177 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G FG V+ D LVAVK L ++F E + + H ++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV------------LDWTTRFNIAIA 612
G C+EG L+V+E+M++G L++ F H D L +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGT 671
A G+ Y +H D+ N L+ + K+ DFG+++ + ++ +V
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE + R T ++DV+S+G++L EI
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 178 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 46/244 (18%)
Query: 514 GGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLVRLCGYCSE 570
G FG V+K L + VAVK + P +K+ EV ++ M H N+++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVK----IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 571 GS----NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC-- 624
G+ + L+ F + GSL ++ + V+ W +IA A+G+AY HE
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 625 -----RNRIIHCDIKPENILLDENFCPKVSDFGLA------KLMGREHSQVVTMVRGTRG 673
+ I H DIK +N+LL N ++DFGLA K G H QV GTR
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-----GTRR 198
Query: 674 YLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMT 728
Y+APE + R ++ D+Y+ G++L E+ R G +++ P F+E
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLP---FEEEI 253
Query: 729 NGTP 732
P
Sbjct: 254 GQHP 257
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 138 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVR 190
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G FG V+ D LVAVK L ++F E + + H ++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV------------LDWTTRFNIAIA 612
G C+EG L+V+E+M++G L++ F H D L +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGT 671
A G+ Y +H D+ N L+ + K+ DFG+++ + ++ +V
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE + R T ++DV+S+G++L EI
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 28 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 87
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 88 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 142
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 143 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 200 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 177 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 9 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 68
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 69 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 123
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 124 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 181 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 178 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 155 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 213
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 267
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 323
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 324 YGPEVDIWSLGIMVIEMVDG 343
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 10 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 124
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 125 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 182 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 178 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 498 RDLQIRTSNFAQLLGT-GGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGS 555
RDL +F +++G G FG VYK + L A K +D ++++ E++ + S
Sbjct: 6 RDLN--PEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H N+V+L +N ++ EF G++D + +R L + + T
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLD 119
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ Y H+ N+IIH D+K NIL + K++DFG++ R Q GT ++
Sbjct: 120 ALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 676 APEWV-----SNRPITVKADVYSYGMLLLEI 701
APE V +RP KADV+S G+ L+E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 500 LQIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGS 555
++++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
+ +V G + E M GSLD+ + + +++L ++IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIK 115
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYM 170
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFK 725
+PE + +V++D++S G+ L+E+ GR + ED P F+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 121 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 178 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 13 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 72
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 73 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 127
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 128 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 185 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 33 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 145
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 201
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 202 YGPEVDIWSLGIMVIEMVDG 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 35 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 147
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 203
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 204 YGPEVDIWSLGIMVIEMVDG 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 44/225 (19%)
Query: 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGY 567
+L+G+GGFG V+K DG ++ RV + EK EV + + H+N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIR---RVKYNNEKA-EREVKALAKLDHVNIVHYNG- 72
Query: 568 C------------------------SEGSNR------LLVYEFMKNGSLDKWIFPSYHHR 597
C S+ S+R + EF G+L++WI R
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRR 129
Query: 598 DRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657
LD + +G+ Y H + ++IH D+KP NI L + K+ DFGL +
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+ + T +GT Y++PE +S++ + D+Y+ G++L E++
Sbjct: 187 KNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 24 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 136
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 192
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 193 YGPEVDIWSLGIMVIEMVDG 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 507 FAQLLGTGGFGSVY----KGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLV 562
F + LG+G FG V+ + S + + + K +P + E E+ + S+ H N++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE--AEIEVLKSLDHPNII 83
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
++ + N +V E + G L + I S R + L + +AYFH
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIV-SAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 623 QCRNRIIHCDIKPENILLDEN--FCP-KVSDFGLAKLMGR-EHSQVVTMVRGTRGYLAPE 678
Q ++H D+KPENIL + P K+ DFGLA+L EHS T GT Y+APE
Sbjct: 143 Q---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE 196
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
V R +T K D++S G+++ ++ G
Sbjct: 197 -VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 28 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 86
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 140
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 196
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 197 YGPEVDIWSLGIMVIEMVDG 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 22/202 (10%)
Query: 509 QLLGTGGFG-SVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
Q +G G FG ++ S DG +K+++ R+ +E EV + +M H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPS---YHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
E + +V ++ + G L K I D++LDW + +A+ + H+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVHD 143
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR---GTRGYLAPEW 679
+ +I+H DIK +NI L ++ ++ DFG+A+++ + V + R GT YL+PE
Sbjct: 144 R---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL----NSTVELARACIGTPYYLSPEI 196
Query: 680 VSNRPITVKADVYSYGMLLLEI 701
N+P K+D+++ G +L E+
Sbjct: 197 CENKPYNNKSDIWALGCVLYEL 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VYK + L A K +D ++++ E++ + S H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
+N ++ EF G++D + +R L + + T + Y H+ N+II
Sbjct: 105 YENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-----SNRP 684
H D+K NIL + K++DFG++ R + + + GT ++APE V +RP
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 685 ITVKADVYSYGMLLLEI 701
KADV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VYK + L A K +D ++++ E++ + S H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
+N ++ EF G++D + +R L + + T + Y H+ N+II
Sbjct: 105 YENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-----SNRP 684
H D+K NIL + K++DFG++ R + + + GT ++APE V +RP
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 685 ITVKADVYSYGMLLLEI 701
KADV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 24/195 (12%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570
LG G FG V+ + T VAVK + + + F+ E N + ++ H LV+L ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 571 GSNRLLVYEFMKNGSLDKWIFP---SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
++ EFM GSL ++ S +++D++ + A+G+A+ + RN
Sbjct: 249 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQ--RN- 298
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH D++ NIL+ + K++DFGLA++ + + + APE ++ T+
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK----------WTAPEAINFGSFTI 348
Query: 688 KADVYSYGMLLLEIV 702
K+DV+S+G+LL+EIV
Sbjct: 349 KSDVWSFGILLMEIV 363
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 146 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 198
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
NF ++ G G G V ++ G LVAVKK+D + EV + H N+V +
Sbjct: 78 NFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 136
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G +V EF++ G+L + + + +++ + +A Q ++ H Q
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQG 190
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S P
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLP 246
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++++E+V G
Sbjct: 247 YGPEVDIWSLGIMVIEMVDG 266
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 144 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 196
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 147 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 199
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 205
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 37/288 (12%)
Query: 510 LLGTGGFGSVYKGSLGD-GTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
L+G G +G V K D G +VA+KK D+++ +K + E+ + + H NLV
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV---KKIAMREIKLLKQLRHENLVN 88
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW-IFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
L C + LV+EF+ + LD +FP+ LD+ GI + H
Sbjct: 89 LLEVCKKKKRWYLVFEFVDHTILDDLELFPNG------LDYQVVQKYLFQIINGIGFCHS 142
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+ IIH DIKPENIL+ ++ K+ DFG A+ + +V TR Y APE +
Sbjct: 143 ---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYDDEVATRWYRAPELLVG 198
Query: 683 RPITVKA-DVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-------KEMTNGTPLK 734
KA DV++ G L+ E+ G D + ++ +E+ N P+
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV- 257
Query: 735 VADRRLEGAVEEEELMR--------AMKVAFWCIQDEVFMRPSMGEVV 774
A RL E E L R + +A C+ + RP E++
Sbjct: 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 146 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 198
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 140 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 192
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 506 NFAQLLGTGGFGSVYKGS---LG--DGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F + LG G FG V + + LG D L VAVK L EKE ++E+ + +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSL--------DKWIFPSY----------HHRDR 599
H N+V L G C+ G L++ E+ G L + + PS R
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMG 658
L+ + + AQG+A+ + IH D+ N+LL K+ DFGLA+ +M
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ V R ++APE + + TV++DV+SYG+LL EI
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VYK + L A K +D ++++ E++ + S H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
+N ++ EF G++D + +R L + + T + Y H+ N+II
Sbjct: 105 YENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-----SNRP 684
H D+K NIL + K++DFG++ R + + GT ++APE V +RP
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRP 216
Query: 685 ITVKADVYSYGMLLLEI 701
KADV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 19/203 (9%)
Query: 509 QLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG+G FG+VYKG + +G V A+K+L + P KE + E + S+ + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
RL G C + +L+ + M G L ++ H+D + N + A+G+ Y +
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-QYLLNWCVQIAKGMNYLED 129
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---GYLAPEW 679
+ R++H D+ N+L+ K++DFGLAKL+G E + G + ++A E
Sbjct: 130 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY--HAEGGKVPIKWMALES 184
Query: 680 VSNRPITVKADVYSYGMLLLEIV 702
+ +R T ++DV+SYG+ + E++
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELM 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 500 LQIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGS 555
++++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
+ +V G + E M GSLD+ + + +++L ++IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIK 115
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYM 170
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGR 705
+PE + +V++D++S G+ L+E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 19/203 (9%)
Query: 509 QLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG+G FG+VYKG + +G V A+K+L + P KE + E + S+ + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
RL G C + +L+ + M G L ++ H+D + N + A+G+ Y +
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-QYLLNWCVQIAEGMNYLED 132
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---GYLAPEW 679
+ R++H D+ N+L+ K++DFGLAKL+G E + G + ++A E
Sbjct: 133 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY--HAEGGKVPIKWMALES 187
Query: 680 VSNRPITVKADVYSYGMLLLEIV 702
+ +R T ++DV+SYG+ + E++
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELM 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 500 LQIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGS 555
++++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
+ +V G + E M GSLD+ + + +++L ++IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIK 115
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYM 170
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGR 705
+PE + +V++D++S G+ L+E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 499 DLQIRTSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE-------KEFVT 548
D++ R + +L LG G F +VYK +VA+KK+ L H + +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALR 61
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E+ + + H N++ L SN LV++FM+ L+ I +D L T
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII------KDNSLVLTPSHI 114
Query: 609 IA--IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
A + T QG+ Y H+ I+H D+KP N+LLDEN K++DFGLAK G +
Sbjct: 115 KAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 667 MVRGTRGYLAPEWV-SNRPITVKADVYSYGMLLLEIV 702
V TR Y APE + R V D+++ G +L E++
Sbjct: 172 QVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 153 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 205
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 562 VRLCGYCSEGSNRLLV-YEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAY 619
V+L +C + +L + KNG L K+I + D T TRF A + Y
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEY 152
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPE 678
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSM 556
+++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+ +V G + E M GSLD+ + + +++L ++IA +G
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKG 178
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y++
Sbjct: 179 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 233
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + +V++D++S G+ L+E+ GR
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 500 LQIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGS 555
++++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
+ +V G + E M GSLD+ + + +++L ++IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIK 115
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYM 170
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGR 705
+PE + +V++D++S G+ L+E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 500 LQIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGS 555
++++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
+ +V G + E M GSLD+ + + +++L ++IA +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIK 115
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYM 170
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGR 705
+PE + +V++D++S G+ L+E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
L ++ Q +G G FG V LGD G VAVK + + F+ E + + +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLR 72
Query: 558 HMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDR-VLDWTTRFNIAIATAQ 615
H NLV+L G E L +V E+M GSL ++ R R VL ++ +
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCE 128
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ Y N +H D+ N+L+ E+ KVSDFGL K E S + +
Sbjct: 129 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 181
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + + + K+DV+S+G+LL EI
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEI 207
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 261
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 262 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSM 556
+++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+ +V G + E M GSLD+ + + +++L ++IA +G
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKG 119
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ ++ GTR Y++
Sbjct: 120 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEMANEFVGTRSYMS 174
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + +V++D++S G+ L+E+ GR
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N ++ E+F K+ DFG M R+ + +G +G L
Sbjct: 143 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 195
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 252
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYHH--RDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 263
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 264 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 503 RTSNFAQLLGTGGFGSVY--KGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN 560
+T F ++LG+G F V+ K L G L A+K + + + E+ + + H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD--WTTRFNIAIATAQ--- 615
+V L ++ LV + + G L DR+L+ T + ++ Q
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGEL----------FDRILERGVYTEKDASLVIQQVLS 117
Query: 616 GIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
+ Y HE N I+H D+KPEN+L +EN ++DFGL+K+ E + +++ GT
Sbjct: 118 AVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTP 171
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
GY+APE ++ +P + D +S G++ ++ G
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 497 YRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM 556
+ +L+ + LG+G FG V G VAVK + E EF E T+ +
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKL 60
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H LV+ G CS+ +V E++ NG L ++ + L+ + + +G
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL----RSHGKGLEPSQLLEMCYDVCEG 116
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---G 673
+A+ ++ IH D+ N L+D + C KVSDFG+ + + + Q V+ V GT+
Sbjct: 117 MAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSV-GTKFPVK 170
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAE 715
+ APE + K+DV+++G+L+ E+ G+ D+ ++E
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
L ++ Q +G G FG V LGD G VAVK + + F+ E + + +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLR 244
Query: 558 HMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDR-VLDWTTRFNIAIATAQ 615
H NLV+L G E L +V E+M GSL ++ R R VL ++ +
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCE 300
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ Y N +H D+ N+L+ E+ KVSDFGL K E S + +
Sbjct: 301 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 353
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + + + K+DV+S+G+LL EI
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++L +G FG+VYKG + +G V A+K+L + P K
Sbjct: 10 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 124
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 125 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 182 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
L ++ Q +G G FG V LGD G VAVK + + F+ E + + +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLR 57
Query: 558 HMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDR-VLDWTTRFNIAIATAQ 615
H NLV+L G E L +V E+M GSL ++ R R VL ++ +
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCE 113
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ Y N +H D+ N+L+ E+ KVSDFGL K E S + +
Sbjct: 114 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 166
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + + + K+DV+S+G+LL EI
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEI 192
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 177 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 252
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 177 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 7 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 66
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L++ + M G L ++ H+D +
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGS-Q 121
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 122 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 179 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 261
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 262 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVR 194
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 254
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 255 PERVTD-----------LMRM------CWQFNPKMRPTFLEIVNLLK 284
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++L +G FG+VYKG + +G V A+K+L + P K
Sbjct: 10 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 124
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 125 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 182 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSM 556
+++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+ +V G + E M GSLD+ + + +++L ++IA +G
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKG 143
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y++
Sbjct: 144 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 198
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + +V++D++S G+ L+E+ GR
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVR 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 258 PERVTD-----------LMRM------CWQFNPNMRPTFLEIVNLLK 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++L +G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFGLAKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 139
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + T+ GT Y+APE +S +
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGH 198
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 231
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVR 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 258 PERVTD-----------LMRM------CWQFNPKMRPTFLEIVNLLK 287
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 5 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 119
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 120 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 177 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETAYYRKGGKGLLPVR 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 258 PERVTD-----------LMRM------CWQFNPKMRPTFLEIVNLLK 287
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKL---DRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G G F VY+ + L DG VA+KK+ D + + + E++ + ++H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
E + +V E G L + I + + R++ T + + + + H +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMI-KHFKKQKRLIPERTVWKYFVQLCSALEHMHSR--- 155
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
R++H DIKP N+ + K+ D GL + + + ++V GT Y++PE +
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYN 214
Query: 687 VKADVYSYGMLLLEIVG 703
K+D++S G LL E+
Sbjct: 215 FKSDIWSLGCLLYEMAA 231
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 57/303 (18%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLV 562
++ G FG V+K L + VAVK + P +K+ E+ + M H NL+
Sbjct: 18 QLLEIKARGRFGCVWKAQLMN-DFVAVK----IFPLQDKQSWQSEREIFSTPGMKHENLL 72
Query: 563 RLCGYCSEGSNR----LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ GSN L+ F GSL ++ + ++ W ++A ++G++
Sbjct: 73 QFIAAEKRGSNLEVELWLITAFHDKGSLTDYL------KGNIITWNELCHVAETMSRGLS 126
Query: 619 YFHEQ---CRNR-----IIHCDIKPENILLDENFCPKVSDFGLA------KLMGREHSQV 664
Y HE CR I H D K +N+LL + ++DFGLA K G H QV
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 665 VTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY 719
GTR Y+APE + R ++ D+Y+ G++L E+V + D G +++
Sbjct: 187 -----GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD--GPVDEYML 239
Query: 720 PGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779
P F+E P ++EE + + K I+D P + ++ +E
Sbjct: 240 P---FEEEIGQHP----------SLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEE 286
Query: 780 SAD 782
D
Sbjct: 287 CWD 289
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 117
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 118 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 175 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 261
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 262 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 135
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + T+ GT Y+APE +S +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGH 194
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDR-VLPHGEKE-FVTEVNTIGSMHHMNLVRLCGY 567
+GTG +G K DG ++ K+LD + EK+ V+EVN + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 568 CSEGSNRLL--VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+ +N L V E+ + G L I R + LD F + + T +A ++C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLD--EEFVLRVMTQLTLAL--KECH 128
Query: 626 NR------IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
R ++H D+KP N+ LD K+ DFGLA+++ + S T V GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQ 187
Query: 680 VSNRPITVKADVYSYGMLLLEI 701
++ K+D++S G LL E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 135
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + T+ GT Y+APE +S +
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGH 194
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 227
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 491 APVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLV----AVKKL-DRVLPHGEK 544
AP R L+ ++LG+G FG+VYKG + +G V A+K+L + P K
Sbjct: 10 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
E + E + S+ + ++ RL G C + +L+ + M G L ++ H+D +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGS-Q 124
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664
N + A+G+ Y ++ R++H D+ N+L+ K++DFG AKL+G E +
Sbjct: 125 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 665 VTMVRGTR---GYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
G + ++A E + +R T ++DV+SYG+ + E++
Sbjct: 182 --HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 511 LGTGGFGSVY----KGSLGDG--TLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY KG + D T VA+K ++ E+ EF+ E + + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI--FPSYHHRDRVL---DWTTRFNIAIATAQGIA 618
L G S+G L++ E M G L ++ + VL + +A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y + N+ +H D+ N + E+F K+ DFG M R+ + +G +G L
Sbjct: 140 YLNA---NKFVHRDLAARNCXVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 192
Query: 679 WVSNRPI-----TVKADVYSYGMLLLEI 701
W+S + T +DV+S+G++L EI
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 126
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 127 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 125
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 126 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 149
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 16/208 (7%)
Query: 507 FAQLLGTGGFGSVYKGSLG--DGT--LVAVK--KLDRVLPHGEKEFVTEVNTIGSMHHMN 560
++LG G FGSV +G+L DGT VAVK KLD +EF++E + H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 561 LVRLCGYCSEGSNR-----LLVYEFMKNGSLDKWIFPS-YHHRDRVLDWTTRFNIAIATA 614
++RL G C E S++ +++ FMK G L ++ S + + T + A
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA-KLMGREHSQVVTMVRGTRG 673
G+ Y RN +H D+ N +L ++ V+DFGL+ K+ ++ + + +
Sbjct: 158 LGMEYLSN--RN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI 701
++A E +++R T K+DV+++G+ + EI
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 123
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 124 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + + +D+++ G ++ ++V G
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 298
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 299 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 252
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGS-VYKGSLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F + V L A+K L++ ++ + +VT E + + + H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 151
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 152 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG+G FG V++ G + K ++ P + E++ + +HH L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
+ +L+ EF+ G L F D + N +G+ + HE I+
Sbjct: 119 DKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IV 171
Query: 630 HCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
H DIKPENI+ + K+ DFGLA + + ++V + T + APE V P+
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEIVDREPVGF 229
Query: 688 KADVYSYGMLLLEIVGG 704
D+++ G+L ++ G
Sbjct: 230 YTDMWAIGVLGYVLLSG 246
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSM 556
+++ +F ++ LG G G V+K S LV +KL + P + + E+ +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+ +V G + E M GSLD+ + + +++L ++IA +G
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKG 135
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y++
Sbjct: 136 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 190
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + +V++D++S G+ L+E+ GR
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 124
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 125 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 501 QIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSM 556
+I LLG G F VY+ S+ G VA+K +D+ + + EV +
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTT----RFNIAIA 612
H +++ L Y + + LV E NG +++++ ++RV ++ F I
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL------KNRVKPFSENEARHFMHQII 122
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
T G+ Y H I+H D+ N+LL N K++DFGLA + H + T+ GT
Sbjct: 123 T--GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTP 176
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLD 709
Y++PE + +++DV+S G + ++ GR D
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI------FPSYH--HRDRVLDWTTRFNI---A 610
L G C++ G +++ EF K G+L ++ F Y D D+ T ++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-VR 669
A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE--- 726
++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEFC 252
Query: 727 --MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 253 RRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 25/237 (10%)
Query: 505 SNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+NF ++ G G G V + G VAVKK+D + EV + HH N+V
Sbjct: 48 ANFIKI-GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
+ G +V EF++ G+L + + + +++ + ++ + ++Y H Q
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------TVCLSVLRALSYLHNQ 160
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
+IH DIK ++ILL + K+SDFG + +E + +V GT ++APE +S
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRL 216
Query: 684 PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY---PGWAFKEMTNGTPLKVAD 737
P + D++S G++++E++ D E ++ P A + + + P +V D
Sbjct: 217 PYGTEVDIWSLGIMVIEMI----------DGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
L ++ Q +G G FG V LGD G VAVK + + F+ E + + +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLR 63
Query: 558 HMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDR-VLDWTTRFNIAIATAQ 615
H NLV+L G E L +V E+M GSL ++ R R VL ++ +
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCE 119
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ Y N +H D+ N+L+ E+ KVSDFGL K E S + +
Sbjct: 120 AMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 172
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + + K+DV+S+G+LL EI
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 130
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 131 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
F + LGTG F V G L AVK + + L E E+ + + H N+V
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ LV + + G L I + ++ D +T + + Y H
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK--DASTLIRQVL---DAVYYLH-- 137
Query: 624 CRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV 680
R I+H D+KPEN+L DE +SDFGL+K+ G+ V++ GT GY+APE +
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK--GDVMSTACGTPGYVAPEVL 194
Query: 681 SNRPITVKADVYSYGMLLLEIVGG 704
+ +P + D +S G++ ++ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 145
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 149
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR-VLPHGEKEFVTEVNTIGSM 556
D ++ + +GTGGF V + G +VA+K +D+ L TE+ + ++
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H ++ +L + +V E+ G L +I +DR+ + TR +
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS----QDRLSEEETRV-VFRQIVSA 120
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL-AKLMGREHSQVVTMVRGTRGYL 675
+AY H Q H D+KPEN+L DE K+ DFGL AK G + + T G+ Y
Sbjct: 121 VAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYA 176
Query: 676 APEWVSNRP-ITVKADVYSYGMLLLEIVGG 704
APE + + + +ADV+S G+LL ++ G
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR--VLPHGEKEFVT-EVNTIGSMHHMNL 561
F ++LG G F +V L A+K L++ ++ + +VT E + + + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT-TRFNIAIATAQGIAYF 620
V+L + + KNG L K+I + D T TRF A + Y
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EIVSALEYL 145
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEW 679
H + IIH D+KPENILL+E+ +++DFG AK++ E Q GT Y++PE
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
++ + +D+++ G ++ ++V G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 509 QLLGTGGFGSVY---KGSLGDG-TLVAVKKL--------DRVLPHGEKEFVTEVNTIGSM 556
++LG G FG V+ K S D L A+K L DRV E++ + EVN
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 84
Query: 557 HHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H +V+L Y + +L L+ +F++ G L F + +F +A A
Sbjct: 85 -HPFIVKLH-YAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELAL 137
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ + H II+ D+KPENILLDE K++DFGL+K +H + GT Y+
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE V+ R T AD +S+G+L+ E++ G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 509 QLLGTGGFGSVY---KGSLGD-GTLVAVKKL--------DRVLPHGEKEFVTEVNTIGSM 556
++LG G FG V+ K + D G L A+K L DRV E++ + +VN
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN----- 88
Query: 557 HHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H +V+L Y + +L L+ +F++ G L F + +F +A A
Sbjct: 89 -HPFVVKLH-YAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELAL 141
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ + H II+ D+KPENILLDE K++DFGL+K +H + GT Y+
Sbjct: 142 GLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYM 197
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE V+ + + AD +SYG+L+ E++ G
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 258 PERVTD-----------LMRM------CWQFNPKMRPTFLEIVNLLK 287
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 509 QLLGTGGFGSVY---KGSLGDG-TLVAVKKL--------DRVLPHGEKEFVTEVNTIGSM 556
++LG G FG V+ K S D L A+K L DRV E++ + EVN
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 85
Query: 557 HHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H +V+L Y + +L L+ +F++ G L F + +F +A A
Sbjct: 86 -HPFIVKLH-YAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELAL 138
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ + H II+ D+KPENILLDE K++DFGL+K +H + GT Y+
Sbjct: 139 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 194
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE V+ R T AD +S+G+L+ E++ G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 509 QLLGTGGFGSVY---KGSLGDG-TLVAVKKL--------DRVLPHGEKEFVTEVNTIGSM 556
++LG G FG V+ K S D L A+K L DRV E++ + EVN
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 84
Query: 557 HHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H +V+L Y + +L L+ +F++ G L F + +F +A A
Sbjct: 85 -HPFIVKLH-YAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELAL 137
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
+ + H II+ D+KPENILLDE K++DFGL+K +H + GT Y+
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE V+ R T AD +S+G+L+ E++ G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGS-LD--KWIFPSYHHRDRVL 601
E + E+ + HH N+V LV + + GS LD K I H+ VL
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 602 DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-- 659
D +T I +G+ Y H +N IH D+K NILL E+ +++DFG++ +
Sbjct: 114 DESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
Query: 660 --EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
++V GT ++APE + R KAD++S+G+ +E+ +G A
Sbjct: 171 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA--------TGAAPY 222
Query: 717 FFYPGWAFKEMT--NGTPLKVADRRLEGAVEEEELMRAMKVAF-----WCIQDEVFMRPS 769
YP +T N P LE V+++E+++ +F C+Q + RP+
Sbjct: 223 HKYPPMKVLMLTLQNDPP------SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
Query: 770 MGEVVK 775
E+++
Sbjct: 277 AAELLR 282
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H D+ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 196
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 257 PERVTD-----------LMRM------CWQFNPKMRPTFLEIVNLLK 286
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 545 EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGS-LD--KWIFPSYHHRDRVL 601
E + E+ + HH N+V LV + + GS LD K I H+ VL
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 602 DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-- 659
D +T I +G+ Y H +N IH D+K NILL E+ +++DFG++ +
Sbjct: 119 DESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
Query: 660 --EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
++V GT ++APE + R KAD++S+G+ +E+ +G A
Sbjct: 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA--------TGAAPY 227
Query: 717 FFYPGWAFKEMT--NGTPLKVADRRLEGAVEEEELMRAMKVAF-----WCIQDEVFMRPS 769
YP +T N P LE V+++E+++ +F C+Q + RP+
Sbjct: 228 HKYPPMKVLMLTLQNDPP------SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
Query: 770 MGEVVK 775
E+++
Sbjct: 282 AAELLR 287
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 159
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + + GT Y+APE +S +
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGH 218
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 157
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + + GT Y+APE +S +
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGH 216
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 249
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDR-VLPHGEKE-FVTEVNTIGSMHHMNLVRLCGY 567
+GTG +G K DG ++ K+LD + EK+ V+EVN + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 568 CSEGSNRLL--VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+ +N L V E+ + G L I R + LD F + + T +A ++C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLD--EEFVLRVMTQLTLAL--KECH 128
Query: 626 NR------IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
R ++H D+KP N+ LD K+ DFGLA+++ + S V GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQ 187
Query: 680 VSNRPITVKADVYSYGMLLLEI 701
++ K+D++S G LL E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSM 556
+++ +F ++ LG G G V K L+ +KL + P + + E+ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
+ +V G + E M GSLD+ + + + +L ++IA +G
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRG 126
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+AY E +++I+H D+KP NIL++ K+ DFG++ G+ + GTR Y+A
Sbjct: 127 LAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMA 181
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + +V++D++S G+ L+E+ GR
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737
R + DV+S G++L ++ G D D+ Y W K+ T P K D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQ-EYSDWKEKK-TYLNPWKKID 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+F +LGTG F V LVA+K + + L E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPS--YHHRDRVLDWTTRFNIAIATAQGIAYFH 621
L G + L+ + + G L I Y RD +R + A + Y H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASRLIFQVLDA--VKYLH 133
Query: 622 EQCRNRIIHCDIKPENIL---LDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ I+H D+KPEN+L LDE+ +SDFGL+K+ + V++ GT GY+APE
Sbjct: 134 DLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
++ +P + D +S G++ ++ G DA+ F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 510 LLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG GGF ++ S D V V K + PH ++ E++ S+ H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G+ + +V E + SL + H R + L G Y H R
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVLGCQYLH---R 133
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
NR+IH D+K N+ L+E+ K+ DFGLA + + + + GT Y+APE +S +
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGH 192
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + DV+S G ++ ++ G+ + S E +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G G FG V D + A+K +++ V + + E+ + + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
+ + +V + + G L + + H ++ T + I + Y Q
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE----TVKLFIC-ELVMALDYLQNQ--- 134
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP-- 684
RIIH D+KP+NILLDE+ ++DF +A ++ RE +Q+ TM GT+ Y+APE S+R
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITTMA-GTKPYMAPEMFSSRKGA 192
Query: 685 -ITVKADVYSYGMLLLEIVGGRR 706
+ D +S G+ E++ GRR
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 32/291 (10%)
Query: 494 NFTYRDLQIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE-KEFVTEVN 551
+FT DL+ + ++ G G +GSV K G ++AVK++ + E K+ + +++
Sbjct: 18 DFTAEDLK----DLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 552 TI-GSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
+ S +V+ G + + E M + S DK+ Y D V+ I
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+AT + + + E + IIH DIKP NILLD + K+ DFG++ + S T G
Sbjct: 132 LATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAG 187
Query: 671 TRGYLAPEWV----SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--AF 724
R Y+APE + S + V++DV+S G+ L E+ GR F YP W F
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR-----------FPYPKWNSVF 236
Query: 725 KEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775
++T +K +L + E E + C+ + RP E++K
Sbjct: 237 DQLTQV--VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDR-VLPHGEKEFVTEVNTIGSMHHMNLVR 563
+F +LGTG F V LVA+K + + L E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPS--YHHRDRVLDWTTRFNIAIATAQGIAYFH 621
L G + L+ + + G L I Y RD +R + A + Y H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASRLIFQVLDA--VKYLH 133
Query: 622 EQCRNRIIHCDIKPENIL---LDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ I+H D+KPEN+L LDE+ +SDFGL+K+ + V++ GT GY+APE
Sbjct: 134 DLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
++ +P + D +S G++ ++ G DA+ F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G + K + S R + T A ++Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 132
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMH 188
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 13/214 (6%)
Query: 509 QLLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+ LG GGF Y+ + D V V K + PH +++ TE+ S+ + ++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G+ + +V E + SL + + R V + R+ + T QG+ Y H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMR-QTIQGVQYLHN-- 160
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
NR+IH D+K N+ L+++ K+ DFGLA + + + T+ GT Y+APE + +
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC-GTPNYIAPEVLCKKG 218
Query: 685 ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + D++S G +L ++ G+ + S E +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDR-VLPHGEKEFVTEVNTIGSMHHMNLVR 563
+F +LGTG F V LVA+K + + L E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPS--YHHRDRVLDWTTRFNIAIATAQGIAYFH 621
L G + L+ + + G L I Y RD +R + A + Y H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASRLIFQVLDA--VKYLH 133
Query: 622 EQCRNRIIHCDIKPENIL---LDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ I+H D+KPEN+L LDE+ +SDFGL+K+ + V++ GT GY+APE
Sbjct: 134 DLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
++ +P + D +S G++ ++ G DA+ F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDR-VLPHGEKEFVTEVNTIGSMHHMNLVR 563
+F +LGTG F V LVA+K + + L E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPS--YHHRDRVLDWTTRFNIAIATAQGIAYFH 621
L G + L+ + + G L I Y RD +R + A + Y H
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASRLIFQVLDA--VKYLH 133
Query: 622 EQCRNRIIHCDIKPENIL---LDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ I+H D+KPEN+L LDE+ +SDFGL+K+ + V++ GT GY+APE
Sbjct: 134 DLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
++ +P + D +S G++ ++ G DA+ F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDR-VLPHGEKE-FVTEVNTIGSMHHMNLVRLCGY 567
+GTG +G K DG ++ K+LD + EK+ V+EVN + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 568 CSEGSNRLL--VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+ +N L V E+ + G L I R + LD F + + T +A ++C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLD--EEFVLRVMTQLTLAL--KECH 128
Query: 626 NR------IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
R ++H D+KP N+ LD K+ DFGLA+++ + V GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQ 187
Query: 680 VSNRPITVKADVYSYGMLLLEI 701
++ K+D++S G LL E+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H ++ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 198
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 258
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 259 PERVTD-----------LMRM------CWQFNPNMRPTFLEIVNLLK 288
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I +M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 511 LGTGGFGSVYKGSLGD------GTLVAVKKLDRVLPHGEK-EFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G+ D T VAVK ++ E+ EF+ E + + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKW---IFPSYHHRDRVLDWTTRFNIAIAT--AQGIA 618
L G S+G L+V E M +G L + + P + T + I +A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG----- 673
Y + + + +H ++ N ++ +F K+ DFG M R+ + +G +G
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 197
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
++APE + + T +D++S+G++L EI + + +S + F + + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
P +V D LMR C Q MRP+ E+V +L+
Sbjct: 258 PERVTD-----------LMRM------CWQFNPNMRPTFLEIVNLLK 287
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 38/211 (18%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+G G +G VYK G +VA+K++ D +P + E++ + +HH N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA---IREISLLKELHHPNIVSLI 85
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD------WTTRFNIAI-ATAQGIA 618
LV+EFM+ +VLD ++ I + +G+A
Sbjct: 86 DVIHSERCLTLVFEFMEKDL------------KKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYL 675
+ H+ +RI+H D+KP+N+L++ + K++DFGLA+ G R ++ V T Y
Sbjct: 134 HCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 676 APE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
AP+ + ++ + D++S G + E++ G+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 38/211 (18%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+G G +G VYK G +VA+K++ D +P + E++ + +HH N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA---IREISLLKELHHPNIVSLI 85
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD------WTTRFNIAI-ATAQGIA 618
LV+EFM+ +VLD ++ I + +G+A
Sbjct: 86 DVIHSERCLTLVFEFMEKDL------------KKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYL 675
+ H+ +RI+H D+KP+N+L++ + K++DFGLA+ G R ++ V T Y
Sbjct: 134 HCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 676 APE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
AP+ + ++ + D++S G + E++ G+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 506 NFAQLLGTGGFGSVYKGSL-----GDGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
+F + LG G FG V + + D + VAVK L E+E ++E+ + + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI-------- 609
HMN+V L G C+ G L++ E+ G L ++ RD + T I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELAL 142
Query: 610 --------AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+ A+G+A+ + IH D+ NILL K+ DFGLA+ + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 662 SQVVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFF 718
+ VV R ++APE + N T ++DV+SYG+ L E+ +G M D++
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 256
Query: 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
F +M +K R L E+ MK C + RP+ ++V+++E
Sbjct: 257 -----FYKM-----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 128
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGK 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 122
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 123 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 506 NFAQLLGTGGFGSVYKGSL-----GDGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
+F + LG G FG V + + D + VAVK L E+E ++E+ + + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI-------- 609
HMN+V L G C+ G L++ E+ G L ++ RD + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELAL 165
Query: 610 --------AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+ A+G+A+ + IH D+ NILL K+ DFGLA+ + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 662 SQVVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFF 718
+ VV R ++APE + N T ++DV+SYG+ L E+ +G M D++
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 279
Query: 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
F +M +K R L E+ MK C + RP+ ++V+++E
Sbjct: 280 -----FYKM-----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 506 NFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPH-GEKEFV-TEVNTIGSMHHMNLV 562
+ + LGTG FG V++ G A K + + PH +KE V E+ T+ + H LV
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH--RDRVLDWTTRFNIAIATAQGIAYF 620
L + + +++YEFM G L + + ++ D +++ + +G+ +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHM 271
Query: 621 HEQCRNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
HE N +H D+KPENI+ K+ DFGL + + Q V + GT + APE
Sbjct: 272 HE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPE 326
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+P+ D++S G+L ++ G
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 506 NFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPH-GEKEFV-TEVNTIGSMHHMNLV 562
+ + LGTG FG V++ G A K + + PH +KE V E+ T+ + H LV
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH--RDRVLDWTTRFNIAIATAQGIAYF 620
L + + +++YEFM G L + + ++ D +++ + +G+ +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ------VCKGLCHM 165
Query: 621 HEQCRNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
HE N +H D+KPENI+ K+ DFGL + + Q V + GT + APE
Sbjct: 166 HE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPE 220
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+P+ D++S G+L ++ G
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 129
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 190 KFSSKSDVWSFGVLMWE 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 145
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 206 KFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 145
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 206 KFSSKSDVWSFGVLMWE 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G + K + S R + T A ++Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 132
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S + GT YL PE + R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 506 NFAQLLGTGGFGSVYKGSL-----GDGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
+F + LG G FG V + + D + VAVK L E+E ++E+ + + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI-------- 609
HMN+V L G C+ G L++ E+ G L ++ RD + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELAL 165
Query: 610 --------AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+ A+G+A+ + IH D+ NILL K+ DFGLA+ + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 662 SQVVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFF 718
+ VV R ++APE + N T ++DV+SYG+ L E+ +G M D++
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 279
Query: 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
F +M +K R L E+ MK C + RP+ ++V+++E
Sbjct: 280 -----FYKM-----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 487
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 548 KFSSKSDVWSFGVLMWE 564
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 124
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 153
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMH 209
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGK 229
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
Y + + L+ E+ G+ ++ R + T I A ++Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYIT-ELANALSYCHSK--- 131
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
R+IH DIKPEN+LL N K++DFG + S T + GT YL PE + R
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 687 VKADVYSYGMLLLEIVGG 704
K D++S G+L E + G
Sbjct: 189 EKVDLWSLGVLCYEFLVG 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G +G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 123
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 184 KFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 125
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 186 KFSSKSDVWSFGVLMWE 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 144
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMH 200
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 201 DEKVDLWSLGVLCYEFLVGK 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 129
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 190 KFSSKSDVWSFGVLMWE 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 488
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 549 KFSSKSDVWSFGVLMWE 565
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 143
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 204 KFSSKSDVWSFGVLMWE 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 506 NFAQLLGTGGFGSVYKGSL-----GDGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
+F + LG G FG V + + D + VAVK L E+E ++E+ + + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI-------- 609
HMN+V L G C+ G L++ E+ G L ++ RD + T I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELAL 160
Query: 610 --------AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+ A+G+A+ + IH D+ NILL K+ DFGLA+ + +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 662 SQVVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFF 718
+ VV R ++APE + N T ++DV+SYG+ L E+ +G M D++
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 274
Query: 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
F +M +K R L E+ MK C + RP+ ++V+++E
Sbjct: 275 -----FYKM-----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
LG G FG V G G VAVK L+R + E+ + H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
S S+ +V E++ G L +I ++ LD + G+ Y H R+
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYIC-----KNGRLDEKESRRLFQQILSGVDYCH---RH 135
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
++H D+KPEN+LLD + K++DFGL+ +M + + G+ Y APE +S R
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 687 -VKADVYSYGMLLLEIVGGRRNLD 709
+ D++S G++L ++ G D
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 506 NFAQLLGTGGFGSVYKGSL-----GDGTL-VAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
+F + LG G FG V + + D + VAVK L E+E ++E+ + + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI-------- 609
HMN+V L G C+ G L++ E+ G L ++ RD + T I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELAL 158
Query: 610 --------AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+ A+G+A+ + IH D+ NILL K+ DFGLA+ + +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 662 SQVVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGGRRNLDMSGDAEDFF 718
+ VV R ++APE + N T ++DV+SYG+ L E+ +G M D++
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 272
Query: 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778
F +M +K R L E+ MK C + RP+ ++V+++E
Sbjct: 273 -----FYKM-----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 511 LGTGGFGSVYKG-----SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
LG+G FG+V KG + V + K + P + E + E N + + + +VR+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C E + +LV E + G L+K++ + H +D+ + + + G+ Y E
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLEE--- 135
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNR 683
+ +H D+ N+LL K+SDFGL+K + + + G + APE ++
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 684 PITVKADVYSYGMLLLE 700
+ K+DV+S+G+L+ E
Sbjct: 196 KFSSKSDVWSFGVLMWE 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 132
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
+G G G+VY + G VA+++++ ++ + E+ + + N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
G +V E++ GSL + + +D + Q + + H N++I
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H DIK +NILL + K++DFG + E S+ TMV GT ++APE V+ + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G++ +E++ G
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 132
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC-GTLDYLPPEXIEGRXH 188
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 506 NFAQLLGTGGFGSVYKG------SLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSMHH 558
+ + +G G FG V++ T+VAVK L + + +F E + +
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 559 MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH------------RDRV------ 600
N+V+L G C+ G L++E+M G L++++ H R RV
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 601 -LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMG 658
L + IA A G+AY E+ + +H D+ N L+ EN K++DFGL++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ + ++ PE + T ++DV++YG++L EI
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 509 QLLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+ LG GGF Y+ + D V V K + PH +++ TE+ S+ + ++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G+ + +V E + SL + + R V + R+ + T QG+ Y H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMR-QTIQGVQYLHN-- 160
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
NR+IH D+K N+ L+++ K+ DFGLA + + + + GT Y+APE + +
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC-GTPNYIAPEVLCKKG 218
Query: 685 ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + D++S G +L ++ G+ + S E +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 71/318 (22%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+G G +G VYK G A+KK+ D +P + E++ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVKLY 66
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+LV+E LD+ + + L+ T + + GIAY H++
Sbjct: 67 DVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYLAPE-WVS 681
R++H D+KP+N+L++ K++DFGLA+ G R+++ V T Y AP+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMG 174
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++ + D++S G + F EM NGTPL
Sbjct: 175 SKKYSTTIDIWSVGCI--------------------------FAEMVNGTPL------FP 202
Query: 742 GAVEEEELMRAMKV------AFWCIQDEVFMRPSMGEVVKMLEGSADINTPPMPQTVLEL 795
G E ++LMR ++ W P++ E+ K P + L
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNW---------PNVTELPKYDPNFTVYEPLPWESFLKGL 253
Query: 796 IEEGLDHVYKAMKRDFNQ 813
E G+D + K +K D NQ
Sbjct: 254 DESGIDLLSKMLKLDPNQ 271
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 509 QLLGTGGFGSVYKGSLGDGTL----VAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVR 563
+++G G FG VY G D A+K L R+ + E F+ E + ++H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 564 LCGYC--SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
L G EG +L+ +M +G L ++I R+ + F + +A +G+ Y
Sbjct: 87 LIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVA--RGMEYLA 141
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVT--MVRGTRGYLAPE 678
EQ + +H D+ N +LDE+F KV+DFGLA+ ++ RE+ V R + A E
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 679 WVSNRPITVKADVYSYGMLLLEIV 702
+ T K+DV+S+G+LL E++
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
Y + + L+ E+ G+ ++ R + T I A ++Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYIT-ELANALSYCHSK--- 131
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
R+IH DIKPEN+LL N K++DFG + + S+ T+ GT YL PE + R
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHD 188
Query: 687 VKADVYSYGMLLLEIVGG 704
K D++S G+L E + G
Sbjct: 189 EKVDLWSLGVLCYEFLVG 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 509 QLLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+ LG GGF Y+ + D V V K + PH +++ TE+ S+ + ++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
G+ + +V E + SL + + R V + R+ + T QG+ Y H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMR-QTIQGVQYLHN-- 160
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
NR+IH D+K N+ L+++ K+ DFGLA + + + + GT Y+APE + +
Sbjct: 161 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPNYIAPEVLCKKG 218
Query: 685 ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
+ + D++S G +L ++ G+ + S E +
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+ Q LG G G V + VAVK +D E + + I M +H N+V+
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ EG+ + L E+ G L I P + D F+ +A G+ Y H
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--DAQRFFHQLMA---GVVYLHGI 123
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-REHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKPEN+LLDE K+SDFGLA + +++ + GT Y+APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 683 RPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDA 714
R + DV+S G++L ++ G D D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 131
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 132 -RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 126
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 183 DEKVDLWSLGVLCYEFLVGK 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 39/230 (16%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNT--IGSMH 557
L + +L+G G +G+VYKGSL D VAVK + F+ E N + M
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLME 65
Query: 558 HMNLVRLC----GYCSEGS-NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
H N+ R ++G LLV E+ NGSL K++ S H DW + +A +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLH----TSDWVSSCRLAHS 119
Query: 613 TAQGIAYFHEQC------RNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--------G 658
+G+AY H + + I H D+ N+L+ + +SDFGL+ + G
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 659 REHSQVVTMVRGTRGYLAPEWVSN-------RPITVKADVYSYGMLLLEI 701
E + ++ V GT Y+APE + + D+Y+ G++ EI
Sbjct: 180 EEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 508 AQLLGTGGFGSVYKGSLGDGTLV----AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+ LG GGF Y+ + D V V K + PH +++ TE+ S+ + ++V
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
G+ + +V E + SL + + R V + R+ + T QG+ Y H
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMR-QTIQGVQYLHN- 144
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
NR+IH D+K N+ L+++ K+ DFGLA + + + + GT Y+APE + +
Sbjct: 145 --NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPNYIAPEVLCKK 201
Query: 684 PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
+ + D++S G +L ++ G+ + S E +
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 133/318 (41%), Gaps = 71/318 (22%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+G G +G VYK G A+KK+ D +P + E++ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVKLY 66
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+LV+E LD+ + + L+ T + + GIAY H++
Sbjct: 67 DVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYLAPE-WVS 681
R++H D+KP+N+L++ K++DFGLA+ G R+++ + T Y AP+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMG 174
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++ + D++S G + F EM NGTPL
Sbjct: 175 SKKYSTTIDIWSVGCI--------------------------FAEMVNGTPL------FP 202
Query: 742 GAVEEEELMRAMKV------AFWCIQDEVFMRPSMGEVVKMLEGSADINTPPMPQTVLEL 795
G E ++LMR ++ W P++ E+ K P + L
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNW---------PNVTELPKYDPNFTVYEPLPWESFLKGL 253
Query: 796 IEEGLDHVYKAMKRDFNQ 813
E G+D + K +K D NQ
Sbjct: 254 DESGIDLLSKMLKLDPNQ 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 128
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 132
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 128
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ T+ GT YL PE + R
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMH 184
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGK 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 22/249 (8%)
Query: 479 KRAVENSLIVCGAPVNFTYRDLQIR--------TSNFAQLLGTGGFGSVYK-GSLGDGTL 529
KR ++ + P F +R + + T + ++LG G FG V+K G
Sbjct: 57 KRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLK 116
Query: 530 VAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL-DK 588
+A K + ++E E++ + + H NL++L ++ +LV E++ G L D+
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 589 WIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCP-- 646
I SY+ + LD T F I +GI + H+ I+H D+KPENIL
Sbjct: 177 IIDESYNLTE--LD-TILFMKQIC--EGIRHMHQMY---ILHLDLKPENILCVNRDAKQI 228
Query: 647 KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRR 706
K+ DFGLA+ V GT +LAPE V+ ++ D++S G++ ++ G
Sbjct: 229 KIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
Query: 707 NLDMSGDAE 715
DAE
Sbjct: 287 PFLGDNDAE 295
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I ++H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 156 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I ++H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 170 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 124
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S T + GT YL PE + R
Sbjct: 125 -RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 181 DEKVDLWSLGVLCYEFLVGK 200
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 129
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K+++FG + + S+ T+ GT YL PE + R
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMH 185
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGK 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALC-GTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-------FPSYHHRDRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + + + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 129
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S + GT YL PE + R
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGK 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ +H D+ N L+++ KVSDFGL++ ++ E++ V R + PE +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSK 197
Query: 685 ITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 198 FSSKSDIWAFGVLMWEI 214
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 71/318 (22%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
+G G +G VYK G A+KK+ D +P + E++ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVKLY 66
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+LV+E LD+ + + L+ T + + GIAY H++
Sbjct: 67 DVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-- 119
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYLAPE-WVS 681
R++H D+KP+N+L++ K++DFGLA+ G R+++ V T Y AP+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMG 174
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
++ + D++S G + F EM NG PL
Sbjct: 175 SKKYSTTIDIWSVGCI--------------------------FAEMVNGAPL------FP 202
Query: 742 GAVEEEELMRAMKV------AFWCIQDEVFMRPSMGEVVKMLEGSADINTPPMPQTVLEL 795
G E ++LMR ++ W P++ E+ K P + L
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNW---------PNVTELPKYDPNFTVYEPLPWESFLKGL 253
Query: 796 IEEGLDHVYKAMKRDFNQ 813
E G+D + K +K D NQ
Sbjct: 254 DESGIDLLSKMLKLDPNQ 271
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
+G G G+VY + G VA+++++ ++ + E+ + + N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
G +V E++ GSL + + +D + Q + + H N++I
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H DIK +NILL + K++DFG + E S+ MV GT ++APE V+ + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G++ +E++ G
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + + + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
+G G G+VY + G VA+++++ ++ + E+ + + N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
G +V E++ GSL + + +D + Q + + H N++I
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H DIK +NILL + K++DFG + E S+ MV GT ++APE V+ + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G++ +E++ G
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 170 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 153
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + GT YL PE + R
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGRMH 209
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGK 229
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 156 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGRE-HSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 196 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 162 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ +H D+ N L+++ KVSDFGL++ ++ E++ V R + PE +
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSK 181
Query: 685 ITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 182 FSSKSDIWAFGVLMWEI 198
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 172 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 155 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + +VY + + + ++ H R + + Q +AY H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 195
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
+G G G+VY + G VA+++++ ++ + E+ + + N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
G +V E++ GSL + + +D + Q + + H N++I
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 139
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H DIK +NILL + K++DFG + E S+ MV GT ++APE V+ + K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G++ +E++ G
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ +H D+ N L+++ KVSDFGL++ ++ E++ V R + PE +
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSK 188
Query: 685 ITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 189 FSSKSDIWAFGVLMWEI 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR---GYLAPEWVSN 682
+ +H D+ N L+++ KVSDFGL++ + + T RG++ + PE +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMY 180
Query: 683 RPITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 155 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGRE-HSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 173 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 147 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K+++FG + S T + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 182 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ +H D+ N L+++ KVSDFGL++ ++ E++ V R + PE +
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSK 177
Query: 685 ITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 178 FSSKSDIWAFGVLMWEI 194
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
+G G G+VY + G VA+++++ ++ + E+ + + N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
G +V E++ GSL + + +D + Q + + H N++I
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 139
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H +IK +NILL + K++DFG + E S+ TMV GT ++APE V+ + K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G++ +E++ G
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 170 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 146 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 200
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
+ +H D+ N L+++ KVSDFGL++ + + + + PE +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 686 TVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLC 565
F + LGTG FG V G VA+K + E EF+ E + ++ H LV+L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G C++ ++ E+M NG L ++ H + + + Y +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHR----FQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ +H D+ N L+++ KVSDFGL++ ++ E++ V R + PE +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSK 182
Query: 685 ITVKADVYSYGMLLLEI 701
+ K+D++++G+L+ EI
Sbjct: 183 FSSKSDIWAFGVLMWEI 199
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V + G + A KKL++ GE + E + ++ +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 565 CGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
Y E + L LV M G L F YH A G+ H
Sbjct: 250 -AYAYETKDALCLVLTLMNGGDLK---FHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
R RI++ D+KPENILLD++ ++SD GLA + Q + GT GY+APE V N
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 684 PITVKADVYSYGMLLLEIVGGR 705
T D ++ G LL E++ G+
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASLILYA 117
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M + +
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 671 TRGYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 511 LGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG VY+G + VAVK L V E +F+ E I +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTTRFNIAIATAQGIA 618
G + R ++ E M G L ++ PS +LD ++A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP------KVSDFGLAKLMGR-EHSQVVTMVRGT 671
Y E N IH DI N LL CP K+ DFG+A+ + R + +
Sbjct: 156 YLEE---NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ PE T K D +S+G+LL EI
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL-----PHGE 543
AP R L+ ++LG+G FG+VYKG + DG V + +VL P
Sbjct: 4 AAPNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN 63
Query: 544 KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDW 603
KE + E + + + RL G C + +L V + M G L + +R R L
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHV---RENRGR-LGS 118
Query: 604 TTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663
N + A+G++Y + R++H D+ N+L+ K++DFGLA+L+ + ++
Sbjct: 119 QDLLNWCMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 664 V-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+ ++A E + R T ++DV+SYG+ + E++
Sbjct: 176 YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 506 NFAQLLGTGGFGSVYKGS------LGDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSM-H 557
F ++LG+G FG V + G VAVK L E+E ++E+ + +
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPS----------YHHRDR-------- 599
H N+V L G C+ L++E+ G L ++ Y ++ R
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 600 VLDWTTRFNIAIATAQGIAYFH-EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LM 657
VL + A A+G+ + + C +H D+ N+L+ K+ DFGLA+ +M
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
+ V R ++APE + T+K+DV+SYG+LL EI
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVR 563
+L+G G +G VYKG + G L A+K +D V E+E E+N + HH N+
Sbjct: 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 564 LCGYCSEGS------NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
G + + LV EF GS+ I + + L I +G+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGL 142
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
++ H+ +++IH DIK +N+LL EN K+ DFG++ + R + T + GT ++AP
Sbjct: 143 SHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 678 EWVS-----NRPITVKADVYSYGMLLLEIVGG 704
E ++ + K+D++S G+ +E+ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + S+ + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALC-GTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 511 LGTGGFGSVY----KGSLGDGTLVAVKKL----------DRVLPHGEKEFVTEVNTIGSM 556
LG+G +G V K + + +KK ++ + +E E++ + S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H N+++L + LV EF + G L + I + D NI G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAANIMKQILSG 158
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDEN---FCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
I Y H ++ I+H DIKPENILL+ K+ DFGL+ +++ + GT
Sbjct: 159 ICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAY 213
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
Y+APE V + K DV+S G+++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 48/235 (20%)
Query: 490 GAPVNFTYRDLQ-IRTSNFAQLLGTGGFGSVYKGSL--------GDGTLVAVKKLDR-VL 539
G P F R L+ IR LG G FG V SL G G +VAVK L
Sbjct: 23 GDPTVFHKRYLKKIRD------LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADAG 73
Query: 540 PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVYEFMKNGSLDKWIFPSYHHR 597
P + E++ + +++H ++++ G C + ++ LV E++ GSL
Sbjct: 74 PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR---------- 123
Query: 598 DRVLDWTTRFNIAIA--------TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
D+ R +I +A +G+AY H Q IH D+ N+LLD + K+
Sbjct: 124 ----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIG 176
Query: 650 DFGLAKLMGREHSQVVTMVRGTRG--YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
DFGLAK + H G + APE + +DV+S+G+ L E++
Sbjct: 177 DFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V + G + A KKL++ GE + E + ++ +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 565 CGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
Y E + L LV M G L F YH A G+ H
Sbjct: 250 -AYAYETKDALCLVLTLMNGGDLK---FHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
R RI++ D+KPENILLD++ ++SD GLA + Q + GT GY+APE V N
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 684 PITVKADVYSYGMLLLEIVGGR 705
T D ++ G LL E++ G+
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 117
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 172
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 119
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 120 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 174
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 117
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 172
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 122
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 123 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 177
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S + GT YL PE + R
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYA 120
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 121 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 175
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 244
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN +++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + S + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ E+ G+L +++ P + +RV + F ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 229
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 192 TRTFSHASDTWMFGVTLWEM 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEVNTI 553
++Q + +G G FG V++G VA+K +E F+ E T+
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 554 GSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT 613
H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 63 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASLILYAYQL 117
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR- 672
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 118 STALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLP 172
Query: 673 -GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 198 TRTFSHASDTWMFGVTLWEM 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 188 TRTFSHASDTWMFGVTLWEM 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G +GSVYK + G +VA+K++ + +E + E++ + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
+ ++ +V E+ GS+ I R++ L I +T +G+ Y H R I
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII----RLRNKTLTEDEIATILQSTLKGLEYLHFM---RKI 147
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H DIK NILL+ K++DFG+A + ++ V GT ++APE + A
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 690 DVYSYGMLLLEIVGGR 705
D++S G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTI-GSMHHMN 560
+F +++G G FG V + AVK L + + EK ++E N + ++ H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYH-HRDR-VLDWTTRFNIAIATAQGIA 618
LV L V +++ G L YH R+R L+ RF A A +
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGEL------FYHLQRERCFLEPRARF-YAAEIASALG 153
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
Y H I++ D+KPENILLD ++DFGL K EH+ + GT YLAPE
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPE 209
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ +P D + G +L E++ G
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 169 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 223
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 175 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 229
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 207
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 153 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 207
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + + A+K L + E + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 127
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
++IH DIKPEN+LL K++DFG + S + GT YL PE + R
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 623 QCRNRIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 179 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 233
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 511 LGTGGFGSVYKGSL--------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNL 561
LG G FG V SL G G +VAVK L P + E++ + +++H ++
Sbjct: 22 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 562 VRLCGYCS-EGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA------- 612
++ G C +G L LV E++ GSL D+ R +I +A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR--------------DYLPRHSIGLAQLLLFAQ 124
Query: 613 -TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVR 669
+G+AY H Q IH ++ N+LLD + K+ DFGLAK + G E+ +V
Sbjct: 125 QICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+ APE + +DV+S+G+ L E++
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 511 LGTGGFGSVY----KGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
LG+G +G V K + + + ++K V + + EV + + H N+++L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
+ + N LV E K G L F HR + + A+ Q G+ Y H
Sbjct: 104 FFEDKRNYYLVMECYKGGEL----FDEIIHRMKF----NEVDAAVIIKQVLSGVTYLH-- 153
Query: 624 CRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV 680
++ I+H D+KPEN+LL +++ K+ DFGL+ + E+ + + GT Y+APE V
Sbjct: 154 -KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKERLGTAYYIAPE-V 209
Query: 681 SNRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ F H+ + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 149 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 203
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 177 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 231
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 114/213 (53%), Gaps = 18/213 (8%)
Query: 497 YRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEF--VTE-V 550
+++ ++R ++LG+G FG+V+KG + +G + + +V+ G + F VT+ +
Sbjct: 28 FKETELRK---LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 84
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
IGS+ H ++VRL G C GS+ LV +++ GSL + HR L N
Sbjct: 85 LAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV---RQHRG-ALGPQLLLNWG 139
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV-TMVR 669
+ A+G+ Y E + ++H ++ N+LL +V+DFG+A L+ + Q++ + +
Sbjct: 140 VQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + T ++DV+SYG+ + E++
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 160 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 214
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASLILYA 497
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ N C K+ DFGL++ M E S +G
Sbjct: 498 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKG 552
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 198 TRTFSHASDTWMFGVTLWEM 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 511 LGTGGFGSVYKGSL--------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNL 561
LG G FG V SL G G +VAVK L P + E++ + +++H ++
Sbjct: 22 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 562 VRLCGYCS-EGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA------- 612
++ G C +G L LV E++ GSL D+ R +I +A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR--------------DYLPRHSIGLAQLLLFAQ 124
Query: 613 -TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVR 669
+G+AY H Q IH ++ N+LLD + K+ DFGLAK + G E+ +V
Sbjct: 125 QICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+ APE + +DV+S+G+ L E++
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 192 TRTFSHASDTWMFGVTLWEM 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV-AVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCG 566
LG G FG+VY + A+K L + E + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFP-SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
Y + + L+ E+ G++ + + S R + T A ++Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK-- 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
R+IH DIKPEN+LL K++DFG + + GT YL PE + R
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGRMH 186
Query: 686 TVKADVYSYGMLLLEIVGGR 705
K D++S G+L E + G+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGK 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 188 TRTFSHASDTWMFGVTLWEM 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 527 GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586
G VAVK +D + EV + H N+V + G ++ EF++ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCP 646
+ + +++ + A Q +AY H Q +IH DIK ++ILL +
Sbjct: 130 TDIVSQVRLNEEQIA------TVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRV 180
Query: 647 KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
K+SDFG + ++ + +V GT ++APE +S + D++S G++++E+V G
Sbjct: 181 KLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 220 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 274
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 154 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 208
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 146 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 200
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 25/247 (10%)
Query: 478 LKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGT-LVAVKKL- 535
+++ +ENS G P T R I + LG G FG+VY +VA+K L
Sbjct: 2 MQKVMENS---SGTPDILT-RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLF 57
Query: 536 -DRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPS 593
++ G E + E+ +HH N++RL Y + L+ E+ G L K +
Sbjct: 58 KSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--- 114
Query: 594 YHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653
+ D I A + Y H + ++IH DIKPEN+LL K++DFG
Sbjct: 115 --QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGW 169
Query: 654 ---AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDM 710
A + R+ TM GT YL PE + R K D++ G+L E++ G +
Sbjct: 170 SVHAPSLRRK-----TMC-GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
Query: 711 SGDAEDF 717
+ E +
Sbjct: 224 ASHNETY 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 142 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 196
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 145 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 199
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ + G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 511 LGTGGFGSVYKGSL----GDGTLVAVKKLD-RVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
LG G FG V +G G VAVK L VL P +F+ EVN + S+ H NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L G + +V E GSL + H +L +R+ A+ A+G+ Y +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR--EHSQVVTMVRGTRGYLAPEWVS 681
R IH D+ N+LL K+ DFGL + + + +H + + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 682 NRPITVKADVYSYGMLLLEI 701
R + +D + +G+ L E+
Sbjct: 188 TRTFSHASDTWMFGVTLWEM 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L D VAVK L L P F E +++H +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 129
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NIL+ KV DFG+A+ + + V V GT YL
Sbjct: 130 NFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
+PE + ++DVYS G +L E++ G
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 195
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIF 195
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 114/213 (53%), Gaps = 18/213 (8%)
Query: 497 YRDLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEF--VTE-V 550
+++ ++R ++LG+G FG+V+KG + +G + + +V+ G + F VT+ +
Sbjct: 10 FKETELRK---LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 66
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
IGS+ H ++VRL G C GS+ LV +++ GSL + HR L N
Sbjct: 67 LAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV---RQHRG-ALGPQLLLNWG 121
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV-TMVR 669
+ A+G+ Y E + ++H ++ N+LL +V+DFG+A L+ + Q++ + +
Sbjct: 122 VQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
++A E + T ++DV+SYG+ + E++
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFV-TEVNTIGSMHHMNLVRLCGYC 568
LG G VY+ G A+K L + + +K+ V TE+ + + H N+++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 569 SEGSNRLLVYEFMKNGSL-DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ LV E + G L D+ + Y+ D + + +AY HE N
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAVAYLHE---NG 168
Query: 628 IIHCDIKPENILLDE---NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H D+KPEN+L + K++DFGL+K++ EH ++ V GT GY APE +
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 685 ITVKADVYSYGMLLLEIVGG 704
+ D++S G++ ++ G
Sbjct: 227 YGPEVDMWSVGIITYILLCG 246
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L D VAVK L L P F E +++H +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 129
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NI++ KV DFG+A+ + + V V GT YL
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
+PE + ++DVYS G +L E++ G +GD+ D
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPD 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 115
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 116 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 173 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
LG G FG V G G VAVK L+R + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
S ++ +V E++ G L +I H R ++ F ++ + Y H R+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILS---AVDYCH---RH 130
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
++H D+KPEN+LLD + K++DFGL+ +M + + G+ Y APE +S R
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 687 -VKADVYSYGMLLLEIVGGRRNLD 709
+ D++S G++L ++ G D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KPEN+L++ K++DFGLA+ G R + V
Sbjct: 110 LFQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 210
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+LL EI +GG
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KPEN+L++ K++DFGLA+ G R + V
Sbjct: 111 LFQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 211
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMN 560
LG G FG V K T VAVK L + + ++E+ + + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----------FPSYHHRDRVLDWTTRFNI 609
++ L G C++ ++ E+ G+L +++ + H+ + L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMGREHSQVVTMV 668
A A+G+ Y + IH D+ N+L+ E+ K++DFGLA+ + ++ + T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
R ++APE + +R T ++DV+S+G+LL EI
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRL-C 565
+++G G FG VY+ L D G LVA+KK+ + +K F E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 623 QCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV- 680
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 ---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIF 195
Query: 681 SNRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 511 LGTGGFGSVY--------KGSLGDGTLVAVKKL-DRVLPHGEKEFVTEVNTIGSM-HHMN 560
LG G FG V K + VAVK L D + V+E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIF----PSYHHR---DRVLDWTTRFNIAIA- 612
++ L G C++ ++ + G+L +++ P + +RV + F ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 ---TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-EHSQVVTMV 668
A+G+ Y Q + IH D+ N+L+ EN K++DFGLA+ + ++ + T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + +R T ++DV+S+G+L+ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 29/239 (12%)
Query: 501 QIRTSNFAQLLGTGGFGSV---YKGSLGDGTLVAVKKLDR-VLPHGEKE--FVTEVNTIG 554
I + LG G FG V Y + G VA+K +++ VL + + E++ +
Sbjct: 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLR 68
Query: 555 SMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR-FNIAIAT 613
+ H ++++L ++V E+ N D + RD++ + R F I +
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIIS 123
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y H R++I+H D+KPEN+LLDE+ K++DFGL+ +M + G+
Sbjct: 124 A--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPN 176
Query: 674 YLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
Y APE +S + + DV+S G++L ++ R D D P FK ++NG
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------DESIP-VLFKNISNGV 228
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 115
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 116 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 173 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL-CG 566
+++G G FG VY+ L D G LVA+KK+ + G+ E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 624 CRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-S 681
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIFG 196
Query: 682 NRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 110 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L D VAVK L L P F E +++H +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 129
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NI++ KV DFG+A+ + + V V GT YL
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
+PE + ++DVYS G +L E++ G
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 108 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 42/233 (18%)
Query: 502 IRTSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSM 556
+ NF ++ +G G +G VYK + G +VA+KK LD + E++ + +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA 614
+H N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLI 109
Query: 615 --------QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQ 663
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++
Sbjct: 110 KSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 166
Query: 664 VVTMVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
V T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 EVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ KE +N + +N LV+L + SN +V E+ G +
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FGLAK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL-CG 566
+++G G FG VY+ L D G LVA+KK+ + G+ E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
+ S G + VY + + ++ H R + + Q +AY H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 624 CRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-S 681
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFG 196
Query: 682 NRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 38/228 (16%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA----- 614
N+V+L + LV+EF+ S+D + +D + I +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMD---------LKKFMDASALTGIPLPLIKSYLF 113
Query: 615 ---QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMV 668
QG+A+ H +R++H D+KPEN+L++ K++DFGLA+ G R + V
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 669 RGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 501 QIRTSNFAQLLGTGGFGSV---YKGSLGDGTLVAVKKLDR-VLPHGEKE--FVTEVNTIG 554
I + LG G FG V Y + G VA+K +++ VL + + E++ +
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLR 59
Query: 555 SMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR-FNIAIAT 613
+ H ++++L ++V E+ N D + RD++ + R F I +
Sbjct: 60 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIIS 114
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y H R++I+H D+KPEN+LLDE+ K++DFGL+ +M + G+
Sbjct: 115 A--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPN 167
Query: 674 YLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
Y APE +S + + DV+S G++L ++ R D
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 29/239 (12%)
Query: 501 QIRTSNFAQLLGTGGFGSV---YKGSLGDGTLVAVKKLDR-VLPHGEKE--FVTEVNTIG 554
I + LG G FG V Y + G VA+K +++ VL + + E++ +
Sbjct: 12 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLR 69
Query: 555 SMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR-FNIAIAT 613
+ H ++++L ++V E+ N D + RD++ + R F I +
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIIS 124
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y H R++I+H D+KPEN+LLDE+ K++DFGL+ +M + G+
Sbjct: 125 A--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPN 177
Query: 674 YLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731
Y APE +S + + DV+S G++L ++ R D D P FK ++NG
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------DESIP-VLFKNISNGV 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 501 QIRTSNFAQLLGTGGFGSV---YKGSLGDGTLVAVKKLDR-VLPHGEKE--FVTEVNTIG 554
I + LG G FG V Y + G VA+K +++ VL + + E++ +
Sbjct: 6 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLR 63
Query: 555 SMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR-FNIAIAT 613
+ H ++++L ++V E+ N D + RD++ + R F I +
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIIS 118
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y H R++I+H D+KPEN+LLDE+ K++DFGL+ +M + G+
Sbjct: 119 A--VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPN 171
Query: 674 YLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
Y APE +S + + DV+S G++L ++ R D
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 38/228 (16%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA----- 614
N+V+L + LV+EF+ S+D + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL---SMD---------LKKFMDASALTGIPLPLIKSYLF 111
Query: 615 ---QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMV 668
QG+A+ H +R++H D+KPEN+L++ K++DFGLA+ G R + V
Sbjct: 112 QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 669 RGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 108 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAY 619
N+V+L + LV+EF+ D + L + F + QG+A+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYLA 676
H +R++H D+KPEN+L++ K++DFGLA+ G R + V T Y A
Sbjct: 119 CHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 677 PE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
PE + + + D++S G + E+V RR L GD+E
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + +GTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+M G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ KV+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVAD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL-CG 566
+++G G FG VY+ L D G LVA+KK+ + G+ E+ + + H N+VRL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
+ S G + VY + + + ++ H R + + Q +AY H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 624 CRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV-S 681
I H DIKP+N+LLD + K+ DFG AK + R V + +R Y APE +
Sbjct: 141 --FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIFG 196
Query: 682 NRPITVKADVYSYGMLLLEIVGGR 705
T DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 509 QLLGTGGFGSVYKGSL----GDGTLVAVK--KLDRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G FG VY+G G+ VAVK K D L + EK F++E + ++ H ++V
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIV 88
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L G E +++ E G L ++ L T ++ + +AY
Sbjct: 89 KLIGIIEEEPTWIIM-ELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 623 -QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
C +H DI NIL+ C K+ DFGL++ + E ++ R +++PE ++
Sbjct: 144 INC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 682 NRPITVKADVYSYGMLLLEIV 702
R T +DV+ + + + EI+
Sbjct: 200 FRRFTTASDVWMFAVCMWEIL 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 509 QLLGTGGFGSVYKGSL----GDGTLVAVK--KLDRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G FG VY+G G+ VAVK K D L + EK F++E + ++ H ++V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIV 76
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L G E +++ E G L ++ L T ++ + +AY
Sbjct: 77 KLIGIIEEEPTWIIM-ELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+H DI NIL+ C K+ DFGL++ + E ++ R +++PE ++
Sbjct: 132 I---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 683 RPITVKADVYSYGMLLLEIV 702
R T +DV+ + + + EI+
Sbjct: 189 RRFTTASDVWMFAVCMWEIL 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLD-RVLPHGEK-----EFVTEVNTIGSMHHMNLVR 563
LG+G F V K G G A K + R L + E EVN + + H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + D T+F I G+ Y H +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQIL--DGVHYLHSK 127
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
RI H D+KPENI+L + P K+ DFG+A + E + GT ++APE
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEI 182
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V+ P+ ++AD++S G++ ++ G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + +GTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+M G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ KV+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVAD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L P T Q+ + + LGTG FG V + G A+K
Sbjct: 3 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 59
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 60 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---- 115
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+DE +V+D
Sbjct: 116 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTD 171
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 172 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VYK + G L A K ++ ++++ E+ + + H +V+L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EF G++D + DR L T I + Q + + RII
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML----ELDRGL---TEPQIQVVCRQMLEALNFLHSKRII 139
Query: 630 HCDIKPENILLDENFCPKVSDFGLA----KLMGREHSQVVTMVRGTRGYLAPEWV----- 680
H D+K N+L+ +++DFG++ K + + S + GT ++APE V
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 194
Query: 681 SNRPITVKADVYSYGMLLLEI 701
+ P KAD++S G+ L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS 569
LG G FG VYK + G L A K ++ ++++ E+ + + H +V+L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629
++ EF G++D + DR L T I + Q + + RII
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML----ELDRGL---TEPQIQVVCRQMLEALNFLHSKRII 131
Query: 630 HCDIKPENILLDENFCPKVSDFGLA----KLMGREHSQVVTMVRGTRGYLAPEWV----- 680
H D+K N+L+ +++DFG++ K + + S + GT ++APE V
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 186
Query: 681 SNRPITVKADVYSYGMLLLEI 701
+ P KAD++S G+ L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASLILYA 117
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ C K+ DFGL++ M E S +G
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKG 172
Query: 671 TR--GYLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
LG G FG V G G VAVK L+R + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
S ++ +V E++ G L +I H R ++ F ++ + Y H R+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILS---AVDYCH---RH 130
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT 686
++H D+KPEN+LLD + K++DFGL+ +M + + G+ Y APE +S R
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 687 -VKADVYSYGMLLLEIVGGRRNLD 709
+ D++S G++L ++ G D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 509 QLLGTGGFGSVYKGSL----GDGTLVAVK--KLDRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G FG VY+G G+ VAVK K D L + EK F++E + ++ H ++V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIV 72
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L G E +++ E G L ++ L T ++ + +AY
Sbjct: 73 KLIGIIEEEPTWIIM-ELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+H DI NIL+ C K+ DFGL++ + E ++ R +++PE ++
Sbjct: 128 I---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 683 RPITVKADVYSYGMLLLEIVG 703
R T +DV+ + + + EI+
Sbjct: 185 RRFTTASDVWMFAVCMWEILS 205
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLD-RVLPHGEK-----EFVTEVNTIGSMHHMNLVR 563
LG+G F V K G G A K + R L + E EVN + + H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + D T+F I G+ Y H +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQIL--DGVHYLHSK 148
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
RI H D+KPENI+L + P K+ DFG+A + E + GT ++APE
Sbjct: 149 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEI 203
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V+ P+ ++AD++S G++ ++ G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L P T Q+ + + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 111 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 211
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 111
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 110
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 111 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 37 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 90
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 149
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 150 ---FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 202
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 203 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 111
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 108 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFAEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 108 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 110 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 112
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 113 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 170 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 498 RDLQIRTS--NFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLPHGEKE-FVTEV 550
RD +I+ + +G G FG V++G VA+K +E F+ E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
T+ H ++V+L G +E ++ E G L ++ R LD + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASLILYA 497
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRG 670
+ +AY + R +H DI N+L+ C K+ DFGL++ M + T +
Sbjct: 498 YQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-----EDSTYYKA 549
Query: 671 TRG-----YLAPEWVSNRPITVKADVYSYGMLLLEIV-------GGRRNLDMSGDAED 716
++G ++APE ++ R T +DV+ +G+ + EI+ G +N D+ G E+
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 11 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 64
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 123
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 124 ---FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 176
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 177 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 511 LGTGGFGSVYKGSL--------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNL 561
LG G FG V SL G G +VAVK L P + E+ + +++H ++
Sbjct: 17 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 562 VRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAY 619
V+ G C + + LV E++ GSL ++ P + + A +G+AY
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRH-----CVGLAQLLLFAQQICEGMAY 127
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
H Q IH + N+LLD + K+ DFGLAK + G E+ +V + AP
Sbjct: 128 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 678 EWVSNRPITVKADVYSYGMLLLEIV 702
E + +DV+S+G+ L E++
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVK--KLDRVLPHGEKE-FVTEVNTIGS 555
+++ NF +LG G FG V G L A+K K D V+ + E + E +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 556 MHHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
+ + C + +RL V E++ G L +H +V + + A
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-------MYHIQQVGKFKEPQAVFYAAE 128
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR---GT 671
I F R II+ D+K +N++LD K++DFG+ K EH R GT
Sbjct: 129 ISIGLFFLHKRG-IIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTTREFCGT 183
Query: 672 RGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
Y+APE ++ +P D ++YG+LL E++ G+ D G+ ED
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD--GEDED 226
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 109
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 110 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 511 LGTGGFGSVYKGSL--------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNL 561
LG G FG V SL G G +VAVK L P + E+ + +++H ++
Sbjct: 16 LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 562 VRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAY 619
V+ G C + + LV E++ GSL ++ P + + A +G+AY
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRH-----CVGLAQLLLFAQQICEGMAY 126
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
H Q IH + N+LLD + K+ DFGLAK + G E+ +V + AP
Sbjct: 127 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 678 EWVSNRPITVKADVYSYGMLLLEIV 702
E + +DV+S+G+ L E++
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 37 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 90
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 149
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 150 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 202
Query: 648 VSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK R T+ GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 203 VTDFGFAK---RVKGATWTLC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 17 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 70
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 129
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 130 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 182
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 183 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 32/221 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEF-------VTEVNTIGSMHHMNLV 562
+G G +G+VYK G VA+K + +P+GE+ V + + + H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLCGYCSEG-SNR----LLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
RL C+ ++R LV+E + LDK P + + D +F
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-ETIKDLMRQF------L 122
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGY 674
+G+ + H C I+H D+KPENIL+ K++DFGLA++ + + +V T Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWY 177
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
APE + D++S G + E+ RR G++E
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 84
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 85 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 190
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 191 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 246
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 247 HEDYQLP 253
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 509 QLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL-----PHGEKEFVTEVNTIGSMHHMNLV 562
+ LG G FG V + VA+K + R L H E E++ + + H +++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE--REISYLKLLRHPHII 72
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L + ++ ++V E+ G L +I + D RF I A I Y H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTE---DEGRRFFQQIICA--IEYCH- 125
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
R++I+H D+KPEN+LLD+N K++DFGL+ +M + G+ Y APE ++
Sbjct: 126 --RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVING 181
Query: 683 RPIT-VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
+ + DV+S G++L ++ GR D D F P FK++ N + D
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFD------DEFIPNL-FKKV-NSCVYVMPDFLSP 233
Query: 742 GAVEEEELMRAMKVA 756
GA + L+R M VA
Sbjct: 234 GA---QSLIRRMIVA 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+++ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 109 LFQLLQGLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ KE +N + +N LV+L + SN +V E+ G +
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FGLAK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 6 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 61
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 62 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 110
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 167
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 168 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 223
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 224 HEDYQLP 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 97
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 98 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 203
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 204 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 259
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 260 HEDYQLP 266
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 59
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 60 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 108
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 165
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 166 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 221
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 222 HEDYQLP 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 9 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 64
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 65 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 113
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 170
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 171 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 226
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 227 HEDYQLP 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 44/232 (18%)
Query: 504 TSNFAQL--LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMH 557
S+F ++ LG G FG V K D A+KK+ H E++ T EV + S++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLN 60
Query: 558 HM-------------NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
H N V+ + S + E+ +NG+L I ++ R W
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE---- 660
I + ++Y H Q IIH D+KP NI +DE+ K+ DFGLAK + R
Sbjct: 121 LFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 661 ---------HSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIV 702
S +T GT Y+A E + K D+YS G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMN 560
RT + +G G FG V++G G VAVK E+ + E + + H N
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 58
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDK-WIFPSYHHRDRVLDWTTRFNI--------AI 611
++ G+ + + NG+ + W+ YH + D+ R+ + A+
Sbjct: 59 IL---GFIAADNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107
Query: 612 ATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+TA G+A+ H Q + I H D+K +NIL+ +N ++D GLA R S T
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDT 164
Query: 667 M------VRGTRGYLAPEWVSNRPITVK-------ADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I +K AD+Y+ G++ EI R + G
Sbjct: 165 IDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA---RRCSIGGI 220
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 221 HEDYQLP 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 9 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 65
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 121
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 122 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 177
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 178 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 511 LGTGGFGSVYKGSL---GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMNLVRLCG 566
LG G FGSV +G VA+K L + + +E + E + + + +VRL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
C + +LV E G L K++ + + + + G+ Y E+
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGMKYLEEK--- 129
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNRP 684
+H D+ N+LL K+SDFGL+K +G + S G + APE ++ R
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 685 ITVKADVYSYGMLLLE 700
+ ++DV+SYG+ + E
Sbjct: 190 FSSRSDVWSYGVTMWE 205
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK R + T+ GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAK---RVKGRTWTLC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 32/221 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEF-------VTEVNTIGSMHHMNLV 562
+G G +G+VYK G VA+K + +P+GE+ V + + + H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLCGYCSEG-SNR----LLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
RL C+ ++R LV+E + LDK P + + D +F
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-ETIKDLMRQF------L 122
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGY 674
+G+ + H C I+H D+KPENIL+ K++DFGLA++ + + +V T Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWY 177
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
APE + D++S G + E+ RR G++E
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKL--DRVLPHGEKEFVTEVNTIGSM 556
L+I ++LG G FG V+ A+K L D VL + E + S+
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 557 --HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT- 613
H L + N V E++ G L YH + +F+++ AT
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL------MYH-----IQSCHKFDLSRATF 123
Query: 614 -----AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK--LMGREHSQVVT 666
G+ + H + I++ D+K +NILLD++ K++DFG+ K ++G +
Sbjct: 124 YAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC 180
Query: 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF--------F 718
GT Y+APE + + D +S+G+LL E++ G+ + E F F
Sbjct: 181 ---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 237
Query: 719 YPGWAFKE 726
YP W KE
Sbjct: 238 YPRWLEKE 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 15/222 (6%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKL---DRVLPHG-EKEFVTEVNTI 553
R I + + LG G FG+VY + K+ ++ G E + E+
Sbjct: 10 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 554 GSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT 613
+ H N++R+ Y + L+ EF G L K + H R D
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGR---FDEQRSATFMEEL 124
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y HE+ ++IH DIKPEN+L+ K++DFG + + + GT
Sbjct: 125 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLD 178
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
YL PE + + K D++ G+L E + G D E
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 2 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 58
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 59 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 114
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 115 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 170
Query: 651 FGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK R + T+ GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 171 FGFAK---RVKGRTWTLC-GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAY 619
N+V+L + LV+EF+ D + L + F + QG+A+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAF 120
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMVRGTRGYLA 676
H +R++H D+KP+N+L++ K++DFGLA+ G R + V T Y A
Sbjct: 121 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 173
Query: 677 PE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
PE + + + D++S G + E+V RR L GD+E
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 211
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 15/222 (6%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKL---DRVLPHG-EKEFVTEVNTI 553
R I + + LG G FG+VY + K+ ++ G E + E+
Sbjct: 9 RKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 554 GSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT 613
+ H N++R+ Y + L+ EF G L K + H R D
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGR---FDEQRSATFMEEL 123
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y HE+ ++IH DIKPEN+L+ K++DFG + + + GT
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLD 177
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
YL PE + + K D++ G+L E + G D E
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 129 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + +GTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ KV+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVAD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 15/222 (6%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKL---DRVLPHG-EKEFVTEVNTI 553
R I + + LG G FG+VY + K+ ++ G E + E+
Sbjct: 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 554 GSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT 613
+ H N++R+ Y + L+ EF G L K + H R D
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGR---FDEQRSATFMEEL 123
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRG 673
A + Y HE+ ++IH DIKPEN+L+ K++DFG + + + GT
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLD 177
Query: 674 YLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
YL PE + + K D++ G+L E + G D E
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 38/228 (16%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA----- 614
N+V+L + LV+EF+ S+D F +D + I +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKDF---------MDASALTGIPLPLIKSYLF 113
Query: 615 ---QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMV 668
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 669 RGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+++D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D +D + I +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKTFMDASALTGIPLPLIKSY 111
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 112 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+ K LD + E++ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 108
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 109 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+ K LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD--RVLDWTTRFNIAIATA--- 614
N+V+L + LV+EF+ H+D + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL--------------HQDLKKFMDASALTGIPLPLIKSY 107
Query: 615 -----QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVT 666
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 108 LFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 667 MVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKL--DRVLPHGEKEFVTEVNTIGSM 556
L+I ++LG G FG V+ A+K L D VL + E + S+
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 557 --HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT- 613
H L + N V E++ G L YH + +F+++ AT
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL------MYH-----IQSCHKFDLSRATF 122
Query: 614 -----AQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK--LMGREHSQVVT 666
G+ + H + I++ D+K +NILLD++ K++DFG+ K ++G +
Sbjct: 123 YAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC 179
Query: 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF--------F 718
GT Y+APE + + D +S+G+LL E++ G+ + E F F
Sbjct: 180 ---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 236
Query: 719 YPGWAFKE 726
YP W KE
Sbjct: 237 YPRWLEKE 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 9 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 65
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 121
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 122 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 177
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 178 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 32/221 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEF-------VTEVNTIGSMHHMNLV 562
+G G +G+VYK G VA+K + +P+GE+ V + + + H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLCGYCSEG-SNR----LLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
RL C+ ++R LV+E + LDK P L T ++
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-------LPAETIKDLMRQFL 122
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGY 674
+G+ + H C I+H D+KPENIL+ K++DFGLA++ + + V T Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWY 177
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
APE + D++S G + E+ RR G++E
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSL-----GDGT-LVAVKKL-DRVLPHGEKEFVTEV 550
+++ + F + LG FG VYKG L G+ T VA+K L D+ +EF E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD-----------R 599
+ H N+V L G ++ +++ + +G L +++ H D
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMG 658
L+ ++ A G+ Y + ++H D+ N+L+ + K+SD GL + +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ +++ ++APE + ++ +D++SYG++L E+
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRV---------LPHGEKEFVTEVNTIGSMHHMN 560
+G G +G+VYK G VA+K + RV LP V + + + H N
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 561 LVRLCGYCSEG-SNR----LLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+VRL C+ ++R LV+E + LDK P + + D +F
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA-ETIKDLMRQF----- 129
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
+G+ + H C I+H D+KPENIL+ K++DFGLA++ + +T V T
Sbjct: 130 -LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTL 183
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
Y APE + D++S G + E+ RR G++E
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 492 PVNFTYRDLQ-IRTSNFAQLLGTGGFGSV---YKGSLGD--GTLVAVKKLDRVLPHGEKE 545
P +F R L+ IR LG G FG V GD G VAVK L P
Sbjct: 15 PTHFEKRFLKRIRD------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK---PESGGN 65
Query: 546 FVT----EVNTIGSMHHMNLVRLCGYCSE--GSNRLLVYEFMKNGSLDKWIFPSYHHRDR 599
+ E+ + +++H N+V+ G C+E G+ L+ EF+ +GSL +++ P ++
Sbjct: 66 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK-- 122
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659
++ + A+ +G+ Y + + +H D+ N+L++ K+ DFGL K +
Sbjct: 123 -INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-- 176
Query: 660 EHSQVVTMVRGTRG----YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
E + V+ R + APE + + +DV+S+G+ L E++
Sbjct: 177 ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSL-----GDGT-LVAVKKL-DRVLPHGEKEFVTEV 550
+++ + F + LG FG VYKG L G+ T VA+K L D+ +EF E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRD-----------R 599
+ H N+V L G ++ +++ + +G L +++ H D
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-LMG 658
L+ ++ A G+ Y + ++H D+ N+L+ + K+SD GL + +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI 701
++ +++ ++APE + ++ +D++SYG++L E+
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ ++ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L +P T Q + LGTG FG V + G A+K
Sbjct: 37 KEFLAKAKEDFLKKWESPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHYAMK 93
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 149
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 150 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 205
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 206 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568
+LG G +G VY G L + +A+K++ + E+ + H N+V+ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 569 SEGSNRLLVYEFMKNGSLDKWIFPSY---HHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
SE + E + GSL + + ++ + + T+ +G+ Y H+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD--- 140
Query: 626 NRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
N+I+H DIK +N+L++ + K+SDFG +K + + T GT Y+APE + P
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGP 199
Query: 685 --ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFK 725
AD++S G ++E+ G+ G+ + + FK
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 104/238 (43%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQ---IRTSNFAQLLGTGGFGSVYKGSLGD-GTLV 530
K FL +A E+ L +P T Q IRT LGTG FG V + G
Sbjct: 17 KEFLAKAKEDFLKKWESPAQNTAHLDQFERIRT------LGTGSFGRVMLVKHKETGNHY 70
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N +N LV+L + SN +V E+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM- 129
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ K
Sbjct: 130 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIK 182
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 183 VADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 492 PVNFTYRDLQ-IRTSNFAQLLGTGGFGSVYKGSL---GD--GTLVAVKKLDRVLPHGEKE 545
P +F R L+ IR LG G FG V GD G VAVK L P
Sbjct: 3 PTHFEKRFLKRIRD------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK---PESGGN 53
Query: 546 FVT----EVNTIGSMHHMNLVRLCGYCSE--GSNRLLVYEFMKNGSLDKWIFPSYHHRDR 599
+ E+ + +++H N+V+ G C+E G+ L+ EF+ +GSL +++ P ++
Sbjct: 54 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK-- 110
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659
++ + A+ +G+ Y + + +H D+ N+L++ K+ DFGL K +
Sbjct: 111 -INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-- 164
Query: 660 EHSQVVTMVRGTRG----YLAPEWVSNRPITVKADVYSYGMLLLEIV 702
E + V+ R + APE + + +DV+S+G+ L E++
Sbjct: 165 ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 511 LGTGGFGSVYKGSL---GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMNLVRLCG 566
LG G FGSV +G VA+K L + + +E + E + + + +VRL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
C + +LV E G L K++ + + + + + G+ Y E+
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEK--- 455
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT--RGYLAPEWVSNRP 684
+H ++ N+LL K+SDFGL+K +G + S G + APE ++ R
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 685 ITVKADVYSYGMLLLEIV 702
+ ++DV+SYG+ + E +
Sbjct: 516 FSSRSDVWSYGVTMWEAL 533
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 38/228 (16%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 560 NLVRLCGYCSEGSNRLLVYE--------FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
N+V+L + LV+E FM +L P L + F +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP--------LIKSYLFQLL- 112
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMV 668
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R ++ V
Sbjct: 113 ---QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 669 RGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLD-RVLPHGEK-----EFVTEVNTIGSMHHMNLVR 563
LG+G F V K G G A K + R L + E EVN + + H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ D T+F I G+ Y H +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQIL--DGVHYLHSK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
RI H D+KPENI+L + P K+ DFG+A + E + GT ++APE
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEI 189
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V+ P+ ++AD++S G++ ++ G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 46/283 (16%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL----VAVKKLDRVL--PHGEKEFVTEVNT 552
D Q N+ +LL T G G+ K L L VA+K +D+ P ++ EV
Sbjct: 9 DEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+ ++H N+V+L L+ E+ G + ++ H R + + ++F ++
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVS 125
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK---LMGREHSQVVTMVR 669
Q Y H++ RI+H D+K EN+LLD + K++DFG + + G+ +
Sbjct: 126 AVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-----LDAFC 174
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD------------------- 709
G Y APE + + DV+S G++L +V G D
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
Query: 710 --MSGDAEDFFYPGWAFKEMTNGTPLKV-ADRRLEGAVEEEEL 749
MS D E+ + GT ++ DR + EE+EL
Sbjct: 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 46/283 (16%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGDGTL----VAVKKLDRVL--PHGEKEFVTEVNT 552
D Q N+ +LL T G G+ K L L VA+K +D+ P ++ EV
Sbjct: 6 DEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIA 612
+ ++H N+V+L L+ E+ G + ++ H R + + ++F ++
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVS 122
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK---LMGREHSQVVTMVR 669
Q Y H++ RI+H D+K EN+LLD + K++DFG + + G+ +
Sbjct: 123 AVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-----LDTFC 171
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD------------------- 709
G+ Y APE + + DV+S G++L +V G D
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 231
Query: 710 --MSGDAEDFFYPGWAFKEMTNGTPLKV-ADRRLEGAVEEEEL 749
MS D E+ + GT ++ DR + EE+EL
Sbjct: 232 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 509 QLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSMHHMNLVRL 564
Q LG GGFG V++ + D A+K++ LP+ E ++ + EV + + H +VR
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 565 CGYCSE---------GSNRLLVY---EFMKNGSLDKWI--FPSYHHRDRVLDWTTRFNIA 610
E S ++ +Y + + +L W+ + R+R + +I
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER----SVCLHIF 124
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR- 669
+ A+ + + H + ++H D+KP NI + KV DFGL M ++ + +
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 670 ----------GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
GT+ Y++PE + + K D++S G++L E++
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 51/260 (19%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV-- 547
G+ + F + R + +G G +G V++GS G VAVK EK +
Sbjct: 24 GSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRE 79
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV------- 600
TE+ + H N++ S+ ++R + S W+ YH +
Sbjct: 80 TELYNTVMLRHENILGFIA--SDMTSR--------HSSTQLWLITHYHEMGSLYDYLQLT 129
Query: 601 -LDWTTRFNIAIATAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654
LD + I ++ A G+A+ H Q + I H D+K +NIL+ +N ++D GLA
Sbjct: 130 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
Query: 655 KLMGREHSQVVTMVR-------GTRGYLAPEWVSNRPITV-------KADVYSYGMLLLE 700
+ HSQ + GT+ Y+APE V + I V + D++++G++L E
Sbjct: 190 VM----HSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWE 244
Query: 701 IVGGRRNLDMSGDAEDFFYP 720
+ R + +G ED+ P
Sbjct: 245 VA---RRMVSNGIVEDYKPP 261
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568
+LG G +G VY G L + +A+K++ + E+ + H N+V+ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 569 SEGSNRLLVYEFMKNGSLDKWIFPSY---HHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
SE + E + GSL + + ++ + + T+ +G+ Y H+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHD--- 126
Query: 626 NRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
N+I+H DIK +N+L++ + K+SDFG +K + + T GT Y+APE + P
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGP 185
Query: 685 --ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFK 725
AD++S G ++E+ G+ G+ + + FK
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 228
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+L+D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V+ + G L A KKL++ G + + E + +H +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIF------PSYHHRDRVLDWTTRFNIAIATAQGIA 618
++ LV M G + I+ P + R + +T + G+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ------IVSGLE 303
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H+ RN II+ D+KPEN+LLD++ ++SD GLA + ++ GT G++APE
Sbjct: 304 HLHQ--RN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPE 359
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGD 713
+ D ++ G+ L E++ R G+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 506 NFAQLLGTGGFGSVYKGSLG--DGTLVAVK----KLDRVLPHGEKEFVTEVNTIGSMHHM 559
++LG G FGSV + L DG+ V V K D + +EF+ E + H
Sbjct: 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHP 85
Query: 560 NLVRLCGYC--SEGSNRL----LVYEFMKNGSLDKWIFPSYHHRDRV---LDWTTRFNIA 610
++ +L G S RL ++ FMK+G L ++ S + L RF +
Sbjct: 86 HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD 145
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA-KLMGREHSQVVTMVR 669
IA G+ Y RN IH D+ N +L E+ V+DFGL+ K+ ++ + +
Sbjct: 146 IAC--GMEYL--SSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+LA E +++ TV +DV+++G+ + EI+
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N L +L + SN +V E+ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 130 FSHLRRIGRFXEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT YLAP + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V+ + G L A KKL++ G + + E + +H +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIF------PSYHHRDRVLDWTTRFNIAIATAQGIA 618
++ LV M G + I+ P + R + +T + G+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ------IVSGLE 303
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H+ RN II+ D+KPEN+LLD++ ++SD GLA + ++ GT G++APE
Sbjct: 304 HLHQ--RN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPE 359
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGD 713
+ D ++ G+ L E++ R G+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V+ + G L A KKL++ G + + E + +H +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIF------PSYHHRDRVLDWTTRFNIAIATAQGIA 618
++ LV M G + I+ P + R + +T + G+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ------IVSGLE 303
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H+ RN II+ D+KPEN+LLD++ ++SD GLA + ++ GT G++APE
Sbjct: 304 HLHQ--RN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPE 359
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGD 713
+ D ++ G+ L E++ R G+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 506 NFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHG------------EKEFVTEVNT 552
LLG GGFG+V+ G L D VA+K + R G E + +V
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--FNIA 610
G H ++RL + +LV E + +F + + + +R F
Sbjct: 94 GGG--HPGVIRLLDWFETQEGFMLVLERPLPA---QDLFDYITEKGPLGEGPSRCFFGQV 148
Query: 611 IATAQGIAYFHEQCRNR-IIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMV 668
+A Q C +R ++H DIK ENIL+D C K+ DFG L+ H + T
Sbjct: 149 VAAIQ-------HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDF 198
Query: 669 RGTRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGG 704
GTR Y PEW+S + A V+S G+LL ++V G
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRL 564
++LG GGFG V+ + G L A KKL++ G + + E + +H +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIF------PSYHHRDRVLDWTTRFNIAIATAQGIA 618
++ LV M G + I+ P + R + +T + G+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQ------IVSGLE 303
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H+ RN II+ D+KPEN+LLD++ ++SD GLA + ++ GT G++APE
Sbjct: 304 HLHQ--RN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPE 359
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGD 713
+ D ++ G+ L E++ R G+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 38/228 (16%)
Query: 505 SNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKK--LDRVLPHGEKEFVTEVNTIGSMHHM 559
NF ++ +G G +G VYK + G +VA+KK LD + E++ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 560 NLVRLCGYCSEGSNRLLVYE--------FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
N+V+L + LV+E FM +L P L + F +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP--------LIKSYLFQLL- 116
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHSQVVTMV 668
QG+A+ H +R++H D+KP+N+L++ K++DFGLA+ G R + V
Sbjct: 117 ---QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 669 RGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
T Y APE + + + D++S G + E+V RR L GD+E
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV-TRRAL-FPGDSE 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 16 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N LV+L + SN +V E+ G +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---- 128
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ +V+D
Sbjct: 129 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTD 184
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 185 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L VAVK L L P F E +++H +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 129
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NI++ KV DFG+A+ + + V V GT YL
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
+PE + ++DVYS G +L E++ G
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L VAVK L L P F E +++H +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 75 VAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 129
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NI++ KV DFG+A+ + + V V GT YL
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
+PE + ++DVYS G +L E++ G
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G G +G V+K D G +VA+KK D V+ +K + E+ + + H NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI---KKIALREIRMLKQLKHPNLVNL 67
Query: 565 CGYCSEGSNRLLVYEFMKN---GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
LV+E+ + LD++ H + + W T Q + + H
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW--------QTLQAVNFCH 119
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE-WV 680
++ IH D+KPENIL+ ++ K+ DFG A+L+ V TR Y +PE V
Sbjct: 120 ---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLV 175
Query: 681 SNRPITVKADVYSYGMLLLEIVGG 704
+ DV++ G + E++ G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N L +L + SN +V E+ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 21/235 (8%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVY-KGSLGDGTLVAVK 533
K FL +A E+ L P T Q + LGTG FG V + G A+K
Sbjct: 17 KEFLAKAKEDFLKKWENPAQNTAHLDQFER---IKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 534 KLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLDKWI 590
LD+ K+ +N + +N L +L + SN +V E+ G +
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---- 129
Query: 591 FPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650
F R + RF AQ + F +I+ D+KPEN+++D+ KV+D
Sbjct: 130 FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 185
Query: 651 FGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
FG AK + GR + GT YLAPE + ++ D ++ G+L+ E+ G
Sbjct: 186 FGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 44/232 (18%)
Query: 504 TSNFAQL--LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMH 557
S+F ++ LG G FG V K D A+KK+ H E++ T EV + S++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLN 60
Query: 558 HM-------------NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
H N V+ + S + E+ +N +L I ++ R W
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE---- 660
I + ++Y H Q IIH D+KP NI +DE+ K+ DFGLAK + R
Sbjct: 121 LFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 661 ---------HSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIV 702
S +T GT Y+A E + K D+YS G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV--TEVNTIGSMHHMN 560
R + +G G +G V++G L G VAVK E+ + TE+ + H N
Sbjct: 8 RQVALVECVGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDN 63
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTR--------FNIAIA 612
++ S+ ++R N S W+ YH + D+ R +A++
Sbjct: 64 ILGFIA--SDMTSR--------NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVS 113
Query: 613 TAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL--MGREHSQVV 665
A G+A+ H Q + I H D K N+L+ N ++D GLA + G ++ +
Sbjct: 114 AACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
Query: 666 TMVR-GTRGYLAPEWVSNRPIT------VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
R GT+ Y+APE + + T D++++G++L EI RR + ++G ED+
Sbjct: 174 NNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI-VNGIVEDYR 230
Query: 719 YP 720
P
Sbjct: 231 PP 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 51/247 (20%)
Query: 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV--TEVNTIGSMHHMN 560
R + +G G +G V++GS G VAVK EK + TE+ + H N
Sbjct: 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHEN 63
Query: 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV--------LDWTTRFNIAIA 612
++ S+ ++R + S W+ YH + LD + I ++
Sbjct: 64 ILGFIA--SDMTSR--------HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS 113
Query: 613 TAQGIAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667
A G+A+ H Q + I H D+K +NIL+ +N ++D GLA + HSQ
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQ 169
Query: 668 VR-------GTRGYLAPEWVSNRPITV-------KADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT+ Y+APE V + I V + D++++G++L E+ R + +G
Sbjct: 170 LDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEVA---RRMVSNGI 225
Query: 714 AEDFFYP 720
ED+ P
Sbjct: 226 VEDYKPP 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 475 KRFLKRAVENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSV----YKGSLGDGTLV 530
K FL +A E+ L P T Q+ + + LGTG FG V +K S G
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNT---AQLDQFDRIKTLGTGSFGRVMLVKHKES---GNHY 69
Query: 531 AVKKLDRVLPHGEKEFVTEVNTIGSMHHMN---LVRLCGYCSEGSNRLLVYEFMKNGSLD 587
A+K LD+ K+ +N + +N LV+L + SN +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM- 128
Query: 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647
F R + RF AQ + F +I+ D+KPEN+L+D+ +
Sbjct: 129 ---FSHLRRIGRFSEPHARF----YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 648 VSDFGLAK-LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V+DFG AK + GR + GT LAPE + ++ D ++ G+L+ E+ G
Sbjct: 182 VTDFGFAKRVKGR-----TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 493 VNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVT--- 548
V YRDLQ +G+G +G+V G G VA+KKL R P + F
Sbjct: 23 VRAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLYR--PFQSELFAKRAY 72
Query: 549 -EVNTIGSMHHMNLVRLCGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVL 601
E+ + M H N++ L + + ++ LV FM L K + DR+
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRI- 130
Query: 602 DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
+F + +G+ Y H IIH D+KP N+ ++E+ K+ DFGLA+ E
Sbjct: 131 ----QF-LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
Query: 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
V TR Y APE + N T D++S G ++ E++ G+
Sbjct: 183 XGXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 29/255 (11%)
Query: 490 GAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSL---GDGTLVAVKKLDRVLPHGEKEF 546
G VN + R L I F ++LG G FG V + GD V V K D +L + E
Sbjct: 11 GIGVNSSNR-LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVEC 69
Query: 547 VTEVNTIGSM--HHMNLVRL-CGYCSEGSNRLL-VYEFMKNGSLDKWIFPSYH-HRDRVL 601
I S+ +H L +L C C + +RL V EF+ G L +H + R
Sbjct: 70 TMTEKRILSLARNHPFLTQLFC--CFQTPDRLFFVMEFVNGGDL------MFHIQKSRRF 121
Query: 602 DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661
D A + + H++ II+ D+K +N+LLD K++DFG+ K G +
Sbjct: 122 DEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICN 177
Query: 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF---- 717
GT Y+APE + D ++ G+LL E++ G + + + F
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
Query: 718 ----FYPGWAFKEMT 728
YP W ++ T
Sbjct: 238 NDEVVYPTWLHEDAT 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 506 NFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNL 561
++LG GG V+ L VAVK L L P F E +++H +
Sbjct: 32 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 91
Query: 562 VRL--CGYCSEGSNRL--LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
V + G + L +V E++ +L + H + + + Q +
Sbjct: 92 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----HTEGPMTPKRAIEVIADACQAL 146
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTRGYL 675
+ H+ N IIH D+KP NI++ KV DFG+A+ + + V V GT YL
Sbjct: 147 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
+PE + ++DVYS G +L E++ G
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG VYKG + + T +VA+K +D E E + E+ + + R G
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ + ++ E++ GS + P L+ T I +G+ Y H + R
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKGLDYLHSE---R 136
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH DIK N+LL E K++DFG+A + + V GT ++APE +
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDF 195
Query: 688 KADVYSYGMLLLEIVGG 704
KAD++S G+ +E+ G
Sbjct: 196 KADIWSLGITAIELAKG 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 509 QLLGTGGFGSVY--KGSL-GDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVRL 564
++LG G FG V K + G V V +V +KE + EV + + H N+++L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ + LV E G L F R R + I GI Y H
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGITYMH--- 143
Query: 625 RNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+N+I+H D+KPEN+LL+ ++ ++ DFGL+ E S+ + GT Y+APE V
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VL 200
Query: 682 NRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVT------EVNTIGSMHHMNLVR 563
LG+G F V K G A K + + + V+ EV+ + + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + T F I G+ Y H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN--GVYYLHSL 133
Query: 624 CRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + PK + DFGLA + G E + GT ++AP
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF----GTPAFVAP 186
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 509 QLLGTGGFGSVY--KGSL-GDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVRL 564
++LG G FG V K + G V V +V +KE + EV + + H N+++L
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ + LV E G L F R R + I GI Y H
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGITYMH--- 166
Query: 625 RNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+N+I+H D+KPEN+LL+ ++ ++ DFGL+ E S+ + GT Y+APE V
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VL 223
Query: 682 NRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 509 QLLGTGGFGSVY--KGSL-GDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVRL 564
++LG G FG V K + G V V +V +KE + EV + + H N+++L
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ + LV E G L F R R + I GI Y H
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGITYMH--- 167
Query: 625 RNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+N+I+H D+KPEN+LL+ ++ ++ DFGL+ E S+ + GT Y+APE V
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VL 224
Query: 682 NRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSG 247
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 51/243 (20%)
Query: 507 FAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV--TEVNTIGSMHHMNLVRL 564
+ +G G +G V++GS G VAVK EK + TE+ + H N++
Sbjct: 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV--------LDWTTRFNIAIATAQG 616
S+ ++R + S W+ YH + LD + I ++ A G
Sbjct: 68 IA--SDMTSR--------HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 617 IAYFH-----EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR-- 669
+A+ H Q + I H D+K +NIL+ +N ++D GLA + HSQ +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVG 173
Query: 670 -----GTRGYLAPEWVSNRPITV-------KADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
GT+ Y+APE V + I V + D++++G++L E+ R + +G ED+
Sbjct: 174 NNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEVA---RRMVSNGIVEDY 229
Query: 718 FYP 720
P
Sbjct: 230 KPP 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 506 NFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLV 562
N +LG G FG V K AVK +++ + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L + S+ +V E G L F R R + I GI Y H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAA-RIIKQVFSGITYMH- 138
Query: 623 QCRNRIIHCDIKPENILLD--ENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
++ I+H D+KPENILL+ E C K+ DFGL+ ++++++ + GT Y+APE
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPE- 193
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V K DV+S G++L ++ G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H +++ L S LV++ M+ G L F + + + TR +I + + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETR-SIMRSLLEAV 213
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
++ H N I+H D+KPENILLD+N ++SDFG + + E + + + GT GYLAP
Sbjct: 214 SFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHL--EPGEKLRELCGTPGYLAP 268
Query: 678 EWV------SNRPITVKADVYSYGMLLLEIVGG 704
E + ++ + D+++ G++L ++ G
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLMGREHSQVVTMVRG 670
+G+ Y H+ N I+H D+KP+NILL + P K+ DFG+++ +G H+ + + G
Sbjct: 142 EGVYYLHQ---NNIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIG--HACELREIMG 195
Query: 671 TRGYLAPEWVSNRPITVKADVYSYGML 697
T YLAPE ++ PIT D+++ G++
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 509 QLLGTGGFGSVY--KGSL-GDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVRL 564
++LG G FG V K + G V V +V +KE + EV + + H N+++L
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ + LV E G L F R R + I GI Y H
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGITYMH--- 149
Query: 625 RNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+N+I+H D+KPEN+LL+ ++ ++ DFGL+ E S+ + GT Y+APE V
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VL 206
Query: 682 NRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSG 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEA 126
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 183
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVT------EVNTIGSMHHMNLVR 563
LG+G F V K G A K + + + V+ EV+ + + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + T F I G+ Y H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN--GVYYLHSL 133
Query: 624 CRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + PK + DFGLA + G E + GT ++AP
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF----GTPEFVAP 186
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 521 KGSLGDGTLVAVKKLDRV--LPHGEKEFVTEVNTIG-----------SMHHMNLVRLCGY 567
+GS LV +KK DR+ + +KE V + I + +H LV L
Sbjct: 30 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 89
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
S V E++ G L +F R + ++ I+ A + Y HE+
Sbjct: 90 FQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--- 141
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
II+ D+K +N+LLD K++D+G+ K G + GT Y+APE +
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 688 KADVYSYGMLLLEIVGGRRNLDMSGDAED 716
D ++ G+L+ E++ GR D+ G +++
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV + G +AVKKL R + H ++ + E+ + M H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 171
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 172 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 224
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N + D++S G ++ E++ GR
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG V+KG + + T +VA+K +D E E + E+ + + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ + ++ E++ GS + P LD T I +G+ Y H + +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEKK-- 125
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH DIK N+LL E+ K++DFG+A + + T V GT ++APE +
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 688 KADVYSYGMLLLEIVGGR 705
KAD++S G+ +E+ G
Sbjct: 184 KADIWSLGITAIELARGE 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 521 KGSLGDGTLVAVKKLDRV--LPHGEKEFVTEVNTIG-----------SMHHMNLVRLCGY 567
+GS LV +KK DR+ + +KE V + I + +H LV L
Sbjct: 19 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 78
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
S V E++ G L +F R + ++ I+ A + Y HE+
Sbjct: 79 FQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--- 130
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
II+ D+K +N+LLD K++D+G+ K G + GT Y+APE +
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 688 KADVYSYGMLLLEIVGGRRNLDMSGDAED 716
D ++ G+L+ E++ GR D+ G +++
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 506 NFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLV 562
N +LG G FG V K AVK +++ + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L + S+ +V E G L F R R + I GI Y H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAA-RIIKQVFSGITYMH- 138
Query: 623 QCRNRIIHCDIKPENILLD--ENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
++ I+H D+KPENILL+ E C K+ DFGL+ ++++++ + GT Y+APE
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPE- 193
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V K DV+S G++L ++ G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAVK +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
++ Q Y H++ I+H D+K EN+LLD + K++DFG + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFC 173
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G+ Y APE + + DV+S G++L +V G D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG V+KG + + T +VA+K +D E E + E+ + + + G
Sbjct: 35 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ + ++ E++ GS + P LD T I +G+ Y H + +
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEKK-- 145
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH DIK N+LL E+ K++DFG+A + + T V GT ++APE +
Sbjct: 146 -IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 688 KADVYSYGMLLLEIVGGR 705
KAD++S G+ +E+ G
Sbjct: 204 KADIWSLGITAIELARGE 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAVK +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
++ Q Y H++ I+H D+K EN+LLD + K++DFG + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFC 173
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G+ Y APE + + DV+S G++L +V G D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 521 KGSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIG-----------SMHHMNLVRLCGY 567
+GS LV +KK DR+ +KE V + I + +H LV L
Sbjct: 62 RGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 121
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
S V E++ G L +F R + ++ I+ A + Y HE+
Sbjct: 122 FQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--- 173
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
II+ D+K +N+LLD K++D+G+ K G + GT Y+APE +
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 688 KADVYSYGMLLLEIVGGRRNLDMSGDAED 716
D ++ G+L+ E++ GR D+ G +++
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 521 KGSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIG-----------SMHHMNLVRLCGY 567
+GS LV +KK DR+ +KE V + I + +H LV L
Sbjct: 15 RGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC 74
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
S V E++ G L +F R + ++ I+ A + Y HE+
Sbjct: 75 FQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG--- 126
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
II+ D+K +N+LLD K++D+G+ K G + GT Y+APE +
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 688 KADVYSYGMLLLEIVGGRRNLDMSGDAED 716
D ++ G+L+ E++ GR D+ G +++
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 511 LGTGGFGSVY----KGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
LG+G +G V K + + + +KK + EV + + H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
+ + N LV E + G L F R + + + A+ Q G Y H
Sbjct: 72 FFEDKRNYYLVMEVYRGGEL----FDEIILRQKF----SEVDAAVIMKQVLSGTTYLH-- 121
Query: 624 CRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVR---GTRGYLAP 677
++ I+H D+KPEN+LL+ + K+ DFGL+ H +V ++ GT Y+AP
Sbjct: 122 -KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKMKERLGTAYYIAP 175
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V + K DV+S G++L ++ G
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 506 NFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLV 562
N +LG G FG V K AVK +++ + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 563 RLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE 622
+L + S+ +V E G L F R R + I GI Y H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAA-RIIKQVFSGITYMH- 138
Query: 623 QCRNRIIHCDIKPENILLD--ENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
++ I+H D+KPENILL+ E C K+ DFGL+ ++++++ + GT Y+APE
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPE- 193
Query: 680 VSNRPITVKADVYSYGMLLLEIVGG 704
V K DV+S G++L ++ G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 119
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 120 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 175 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 119
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 120 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 175 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVT------EVNTIGSMHHMNLVR 563
LG+G F V K G A K + + + V+ EV+ + + H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + T F I G+ Y H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN--GVYYLHSL 133
Query: 624 CRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + PK + DFGLA + G E + GT ++AP
Sbjct: 134 ---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF----GTPEFVAP 186
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 507 FAQLLGTGGFGSVYKG---SLGD-----GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH 558
F + LG G F ++KG +GD T V +K LD+ + + F + + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 559 MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+LV G C G +LV EF+K GSLD ++ ++ + +A A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLAAAMH 127
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT---MVRGTRGYL 675
+ E N +IH ++ +NILL K + KL S V +++ ++
Sbjct: 128 FLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 676 APEWVSN-RPITVKADVYSYGMLLLEIVGG 704
PE + N + + + D +S+G L EI G
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 509 QLLGTGGFGSVY--KGSL-GDGTLVAVKKLDRVLPHGEKE-FVTEVNTIGSMHHMNLVRL 564
++LG G FG V K + G V V +V +KE + EV + + H N+ +L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ + LV E G L F R R + I GI Y H
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGITYXH--- 143
Query: 625 RNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+N+I+H D+KPEN+LL+ ++ ++ DFGL+ E S+ GT Y+APE V
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VL 200
Query: 682 NRPITVKADVYSYGMLLLEIVGG 704
+ K DV+S G++L ++ G
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSG 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 623 --QCRNR-IIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 126
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 183
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG V+KG + + T +VA+K +D E E + E+ + + + G
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQC 624
+GS ++ E++ GS + R D F IA + G+ Y H +
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLL------RAGPFD---EFQIATMLKEILKGLDYLHSEK 140
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
+ IH DIK N+LL E K++DFG+A + + T V GT ++APE +
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSA 196
Query: 685 ITVKADVYSYGMLLLEIVGGR-RNLDMSGDAEDFFYP 720
KAD++S G+ +E+ G N DM F P
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP 233
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 141
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 198
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 141
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 198
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 44/232 (18%)
Query: 504 TSNFAQL--LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMH 557
S+F ++ LG G FG V K D A+KK+ H E++ T EV + S++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLN 60
Query: 558 HM-------------NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWT 604
H N V+ + S + E+ +N +L I ++ R W
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 605 TRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE---- 660
I + ++Y H Q IIH ++KP NI +DE+ K+ DFGLAK + R
Sbjct: 121 LFRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 661 ---------HSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIV 702
S +T GT Y+A E + K D YS G++ E +
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 127
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 184
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAVK +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
++ Q Y H++ I+H D+K EN+LLD + K++DFG + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDAFC 173
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G Y APE + + DV+S G++L +V G D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 169
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 226
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 142
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 127
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 184
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEV 550
PV++ YR+ ++ LG G FG V++ G AVKK+ E V E+
Sbjct: 62 PVDYEYRE-EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEEL 115
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTT 605
+ +V L G EG + E ++ GSL + I P DR L +
Sbjct: 116 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALYYLG 171
Query: 606 RFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-PKVSDFGLAKLM---GREH 661
+ +G+ Y H + RI+H D+K +N+LL + + DFG A + G
Sbjct: 172 Q------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 222
Query: 662 SQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
S + + GT ++APE V +P K D++S ++L ++ G
Sbjct: 223 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 127
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 184
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 494 NFTYRDLQIRTSNFAQLLGTGGFGSVY----KGSLGDGTLVAVKKLDRVLPHGEKEFVTE 549
N ++ L R +L G+G +G V K + + + +KK + E
Sbjct: 13 NLYFQGLSDRYQRVKKL-GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE 71
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + + H N+++L + + N LV E + G L F R + + +
Sbjct: 72 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKF----SEVDA 123
Query: 610 AIATAQ---GIAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQ 663
A+ Q G Y H ++ I+H D+KPEN+LL+ + K+ DFGL+ H +
Sbjct: 124 AVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFE 175
Query: 664 VVTMVR---GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
V ++ GT Y+APE V + K DV+S G++L ++ G
Sbjct: 176 VGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 507 FAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVR 563
+ +G G F V + G VAVK +D+ P ++ EV + ++H N+V+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L LV E+ G + ++ H R + + +F ++ Q Y H++
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQ---YCHQK 133
Query: 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
I+H D+K EN+LLD + K++DFG + + + G+ Y APE +
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGK 188
Query: 684 PIT-VKADVYSYGMLLLEIVGGRRNLD 709
+ DV+S G++L +V G D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVK--KLDRVLPHGEKE-FVTEVNTIGS 555
+++ NF +LG G FG V G L AVK K D V+ + E + E +
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 556 MHHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
+ C + +RL V E++ G L +H +V + + A
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-------MYHIQQVGRFKEPHAVFYAAE 450
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGY 674
I F Q + II+ D+K +N++LD K++DFG+ K + GT Y
Sbjct: 451 IAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDY 508
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY 719
+APE ++ +P D +++G+LL E++ G+ + G+ ED +
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE--GEDEDELF 551
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPE 211
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 161
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 218
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 169
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 226
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 154
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 211
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 155
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 16/222 (7%)
Query: 500 LQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVK--KLDRVLPHGEKE-FVTEVNTIGS 555
+++ NF +LG G FG V G L AVK K D V+ + E + E +
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 556 MHHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
+ C + +RL V E++ G L +H +V + + A
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-------MYHIQQVGRFKEPHAVFYAAE 129
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGY 674
I F Q + II+ D+K +N++LD K++DFG+ K GT Y
Sbjct: 130 IAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDY 187
Query: 675 LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
+APE ++ +P D +++G+LL E++ G+ + G+ ED
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE--GEDED 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 511 LGTGGFGSVYKGS--LGDGTLVAVKKLDRVLPHGEKE---FVTEVNTIGSMHHMNLVRLC 565
LG G + +VYKG L D LVA+K++ L H E + EV+ + + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHE 622
+ LV+E++ + L +++ D + N+ + Q G+AY H
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYL-------DDCGNIINMHNVKLFLFQLLRGLAYCH- 117
Query: 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655
R +++H D+KP+N+L++E K++DFGLA+
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 493 VNFTYRDLQIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVT 548
+N T ++ R N A + G+G +GSV G VAVKKL R + H ++ +
Sbjct: 23 LNKTIWEVPERYQNLAPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-R 80
Query: 549 EVNTIGSMHHMNLVRLCGYCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDW 603
E+ + M H N++ L + E N + + + L+ + ++ D
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDD 135
Query: 604 TTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663
+F I +G+ Y H IIH D+KP N+ ++E+ K+ DFGLA+ E +
Sbjct: 136 HVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 191
Query: 664 VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
V TR Y APE + N D++S G ++ E++ GR
Sbjct: 192 YV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAV+ +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK--LMGREHSQVVTM 667
++ Q Y H++ I+H D+K EN+LLD + K++DFG + G + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC-- 173
Query: 668 VRGTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G+ Y APE + + DV+S G++L +V G D
Sbjct: 174 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAVK +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVA--HGRXKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
++ Q Y H++ I+H D+K EN+LLD + K++DFG + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFC 173
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G Y APE + + DV+S G++L +V G D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 125
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 182
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 174
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 231
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 507 FAQLLGTGGFGSVYKG---SLGD-----GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH 558
F + LG G F ++KG +GD T V +K LD+ + + F + + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 559 MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+LV G C G +LV EF+K GSLD ++ ++ + +A A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLAWAMH 127
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT---MVRGTRGYL 675
+ E N +IH ++ +NILL K + KL S V +++ ++
Sbjct: 128 FLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 676 APEWVSN-RPITVKADVYSYGMLLLEIVGG 704
PE + N + + + D +S+G L EI G
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 122
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGE--KEFVTE 549
T D Q N+ +LL T G G+ K L G VAV+ +D+ + ++ E
Sbjct: 5 TSADEQPHIGNY-RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 550 VNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
V + ++H N+V+L LV E+ G + ++ H R + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQ 121
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR 669
++ Q Y H++ I+H D+K EN+LLD + K++DFG + +
Sbjct: 122 IVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFC 173
Query: 670 GTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
G+ Y APE + + DV+S G++L +V G D
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTI--GSMHHMNLVRLCG 566
LLG+GGFGSVY G + D VA+K H EK+ +++ + G+ M +V L
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE---- 622
S S + + ++ + I + D+ T A+ ++F +
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEA 149
Query: 623 --QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PE
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 206
Query: 679 WVS-NRPITVKADVYSYGMLLLEIVGG 704
W+ +R A V+S G+LL ++V G
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 511 LGTGGFGSVYKGS--LGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+G G +G V+K G VA+K++ + +P V + + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 564 LCGYCS-----EGSNRLLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
L C+ + LV+E + LDK P + T ++ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-------VPTETIKDMMFQLLR 131
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ + H +R++H D+KP+NIL+ + K++DFGLA++ + + +T V T Y
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYR 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
EV+ + + H N++ L ++ +L+ E + G L ++ + T F
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFL 120
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK----VSDFGLAKLM--GREHS 662
I G+ Y H +I H D+KPENI+L + PK + DFGLA + G E
Sbjct: 121 KQILN--GVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
+ GT ++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 176 NIF----GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 153
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 206
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 117
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 118 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 171
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGE--KEFVTEVNTIGS 555
DL I + +G G F V + G VAVK +D+ + ++ EV +
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 556 MHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
++H N+V+L LV E+ G + ++ +++ + +F ++ Q
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK--EARAKFRQIVSAVQ 120
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
Y H++ I+H D+K EN+LLD + K++DFG + + G+ Y
Sbjct: 121 ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYA 172
Query: 676 APEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLD 709
APE + + DV+S G++L +V G D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 118
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 119 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 118
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 119 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLVRLCGY 567
LG G F V + L K+ ++F E + H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
E S LV++ + G L F R+ + I + IAY H N
Sbjct: 74 IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQ-QILESIAYCHS---NG 125
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H ++KPEN+LL + K++DFGLA + S+ GT GYL+PE + P
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 685 ITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
+ D+++ G++L ++ G R + A D+ P W
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 231
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLVRLCGY 567
LG G F V + L K+ ++F E + H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
E S LV++ + G L F R+ + I + IAY H N
Sbjct: 74 IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQ-QILESIAYCHS---NG 125
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H ++KPEN+LL + K++DFGLA + S+ GT GYL+PE + P
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 685 ITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
+ D+++ G++L ++ G R + A D+ P W
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 118
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 119 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG V+KG + + T +VA+K +D E E + E+ + + + G
Sbjct: 30 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ + ++ E++ GS + P LD T I +G+ Y H + +
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEKK-- 140
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH DIK N+LL E+ K++DFG+A + + V GT ++APE +
Sbjct: 141 -IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 198
Query: 688 KADVYSYGMLLLEIVGGR 705
KAD++S G+ +E+ G
Sbjct: 199 KADIWSLGITAIELARGE 216
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 141
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 142 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 194
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 202
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 506 NFAQLLGTGGFGSVYK------GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHM 559
+++G G F V + G +V V K ++ E + + H
Sbjct: 27 ELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86
Query: 560 NLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIAT------ 613
++V L S +V+EFM L I + D ++ A+A+
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIV-------KRADAGFVYSEAVASHYMRQI 139
Query: 614 AQGIAYFHEQCRNRIIHCDIKPENILL--DENFCP-KVSDFGLAKLMGREHSQVVTMVRG 670
+ + Y H+ N IIH D+KPEN+LL EN P K+ DFG+A +G E V G
Sbjct: 140 LEALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVG 195
Query: 671 TRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
T ++APE V P DV+ G++L ++ G L G E F
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLF 241
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLVRLCGY 567
LG G F V + L K+ ++F E + H N+VRL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
E S LV++ + G L F R+ + I + IAY H N
Sbjct: 73 IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQ-QILESIAYCHS---NG 124
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H ++KPEN+LL + K++DFGLA + S+ GT GYL+PE + P
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 685 ITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
+ D+++ G++L ++ G R + A D+ P W
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 511 LGTGGFGSVYKGS--LGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+G G +G V+K G VA+K++ + +P V + + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 564 LCGYCS-----EGSNRLLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
L C+ + LV+E + LDK P + T ++ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-------VPTETIKDMMFQLLR 131
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ + H +R++H D+KP+NIL+ + K++DFGLA++ + + +T V T Y
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYR 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 139
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 192
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 140
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 141 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 193
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 191
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYK----GSLGDGTLVAVKKLDRVL----PHGEKEFVTEV 550
+IR F L LG GG+G V++ G + A+K L + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
N + + H +V L G L+ E++ G L F ++ T F +A
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLA 128
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR- 669
+ + + H++ II+ D+KPENI+L+ K++DFGL K H VT
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFC 182
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
GT Y+APE + D +S G L+ +++ G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 26/228 (11%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT---EVNTIGSMHHMNLVRLCGY 567
LG G F V + L K+ ++F E + H N+VRL
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
E S LV++ + G L F R+ + I + IAY H N
Sbjct: 97 IQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQ-QILESIAYCHS---NG 148
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H ++KPEN+LL + K++DFGLA + S+ GT GYL+PE + P
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 685 ITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
+ D+++ G++L ++ G R + A D+ P W
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 254
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 139
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 192
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 511 LGTGGFGSVYKGS--LGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+G G +G V+K G VA+K++ + +P V + + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 564 LCGYCS-----EGSNRLLVYEFMKNG---SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
L C+ + LV+E + LDK P + T ++ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-------VPTETIKDMMFQLLR 131
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
G+ + H +R++H D+KP+NIL+ + K++DFGLA++ + + +T V T Y
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYR 186
Query: 676 APEWVSNRPITVKADVYSYGMLLLEI 701
APE + D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 243
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 244 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 297
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 340
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 124
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 125 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 178
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 191
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 153
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 206
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+G G FG V+KG + + T +VA+K +D E E + E+ + + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
+ + ++ E++ GS + P LD T I +G+ Y H + +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEKK-- 125
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITV 687
IH DIK N+LL E+ K++DFG+A + + V GT ++APE +
Sbjct: 126 -IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 183
Query: 688 KADVYSYGMLLLEIVGGR 705
KAD++S G+ +E+ G
Sbjct: 184 KADIWSLGITAIELARGE 201
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 191
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEV 550
PV++ YR+ ++ +G G FG V++ G AVKK+ E V E+
Sbjct: 48 PVDYEYRE-EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEEL 101
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTT 605
+ +V L G EG + E ++ GSL + I P DR L +
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALYYLG 157
Query: 606 RFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-PKVSDFGLAKLM---GREH 661
+ +G+ Y H + RI+H D+K +N+LL + + DFG A + G
Sbjct: 158 Q------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208
Query: 662 SQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
S + + GT ++APE V +P K D++S ++L ++ G
Sbjct: 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEV 550
PV++ YR+ ++ +G G FG V++ G AVKK+ E V E+
Sbjct: 64 PVDYEYRE-EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEEL 117
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTT 605
+ +V L G EG + E ++ GSL + I P DR L +
Sbjct: 118 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE----DRALYYLG 173
Query: 606 RFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-PKVSDFGLAKLM---GREH 661
+ +G+ Y H + RI+H D+K +N+LL + + DFG A + G
Sbjct: 174 Q------ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 224
Query: 662 SQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
S + + GT ++APE V +P K D++S ++L ++ G
Sbjct: 225 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 548 TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF 607
TE+ + ++H ++++ + + + +V E M+ G L F R+ + T +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 257
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQV 664
+ Y HE N IIH D+KPEN+LL +E+ K++DFG +K++G + +
Sbjct: 258 YF-YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 311
Query: 665 VTMVRGTRGYLAPEWVS-------NRPITVKADVYSYGMLLLEIVGG 704
+ + GT YLAPE + NR + D +S G++L + G
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAV----DCWSLGVILFICLSG 354
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 215
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 161
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 214
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 501 QIRTSNFAQL--LGTGGFGSVYK----GSLGDGTLVAVKKLDRVL----PHGEKEFVTEV 550
+IR F L LG GG+G V++ G + A+K L + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIA 610
N + + H +V L G L+ E++ G L F ++ T F +A
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLA 128
Query: 611 IATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR- 669
+ + + H++ II+ D+KPENI+L+ K++DFGL K H VT
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFC 182
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
GT Y+APE + D +S G L+ +++ G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 165
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 218
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 161
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 214
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + + ++ D +F I +G+ Y H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCA-----KLTDDHVQFLI-YQILRGLKYIH 138
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 191
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 215
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 38/228 (16%)
Query: 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV---------- 547
+D I + L G F + D A+KK ++ L +++F
Sbjct: 26 KDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIK 84
Query: 548 -------TEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRV 600
E+ I + + + G + ++YE+M+N S+ K F Y V
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK--FDEYFF---V 139
Query: 601 LDWTTRFNIAIATAQGI--------AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652
LD I I + I +Y H + I H D+KP NIL+D+N K+SDFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT--VKADVYSYGMLL 698
++ M + + RGT ++ PE+ SN K D++S G+ L
Sbjct: 198 ESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 165
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E V TR Y APE +
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV----ATRWYRAPEIML 218
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H N++ L +G + LV E M+ G L I +R + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-----TIGKT 133
Query: 617 IAYFHEQCRNRIIHCDIKPENIL-LDEN---FCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
+ Y H Q ++H D+KP NIL +DE+ C ++ DFG AK + E+ ++T T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++APE + + D++S G+LL ++ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVR 563
LG+G F V K L K+ R G +E EV+ + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + + T F I G+ Y H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL--DGVNYLHTK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + P K+ DFGLA + G E + GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAP 187
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 47/228 (20%)
Query: 509 QLLGTGGFGSV-YKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G G+V ++GS G VAVK++ D L E + +TE S H N++
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL--MEIKLLTE-----SDDHPNVI 72
Query: 563 RLCGYCSEGSNRLLVYEF-MKNGSLDKWIFPSYHHRDRVLDWTTRFN---IAIATAQGIA 618
R YCSE ++R L + N +L + S + D L +N + A G+A
Sbjct: 73 RY--YCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 619 YFHEQCRNRIIHCDIKPENILLD-------------ENFCPKVSDFGLAKLMGREHSQVV 665
+ H +IIH D+KP+NIL+ EN +SDFGL K + S
Sbjct: 130 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 666 TMVR---GTRGYLAPEWV-------SNRPITVKADVYSYGMLLLEIVG 703
T + GT G+ APE + + R +T D++S G + I+
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVR 563
LG+G F V K L K+ R G +E EV+ + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + + T F I G+ Y H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL--DGVNYLHTK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + P K+ DFGLA + G E + GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAP 187
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H N++ L +G + LV E M+ G L I +R + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-----TIGKT 133
Query: 617 IAYFHEQCRNRIIHCDIKPENIL-LDEN---FCPKVSDFGLAKLMGREHSQVVTMVRGTR 672
+ Y H Q ++H D+KP NIL +DE+ C ++ DFG AK + E+ ++T T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++APE + + D++S G+LL ++ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KSQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGL + E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 47/227 (20%)
Query: 511 LGTGGFGSVYKGSLGDG-TLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G G +G+V+K + +VA+K++ D +P + E+ + + H N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---LREICLLKELKHKNIVRL 66
Query: 565 CGYCSEGSNRLLVYEFMK----------NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
LV+EF NG LD I S+
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---------------LFQLL 111
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHS-QVVTMVRG 670
+G+ + H RN ++H D+KP+N+L++ N K++DFGLA+ G R +S +VVT+
Sbjct: 112 KGLGFCHS--RN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL--- 165
Query: 671 TRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
Y P+ + + + D++S G + E+ R L D +D
Sbjct: 166 --WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDD 210
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVR 563
LG+G F V K L K+ R G +E EV+ + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + + T F I G+ Y H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQIL--DGVNYLHTK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + P K+ DFGLA + G E + GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAP 187
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 13 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 73 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 123
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 124 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 179
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVR 563
LG+G F V K L K+ R G +E EV+ + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + L + G+ Y H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + P K+ DFGLA + G E + GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAP 187
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 511 LGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVR 563
LG+G F V K L K+ R G +E EV+ + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
L ++ +L+ E + G L ++ + L + G+ Y H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 624 CRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTRGYLAP 677
+I H D+KPENI+L + P K+ DFGLA + G E + GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAP 187
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGG 704
E V+ P+ ++AD++S G++ ++ G
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 506 NFAQLLGTGGFGSVYK-----GSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHH 558
+ + LG+G F V K L K+ R G +E EV+ + + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 559 MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
N++ L ++ +L+ E + G L ++ + L + G+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVN 129
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCP----KVSDFGLAKLM--GREHSQVVTMVRGTR 672
Y H + +I H D+KPENI+L + P K+ DFGLA + G E + GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTP 182
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++APE V+ P+ ++AD++S G++ ++ G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 68 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 118
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E V TR Y APE +
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATRWYRAPEIML 215
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 68 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 118
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL + + H ++ + E+ + M H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE +
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 11 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 71 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 121
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 177
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ D+GLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 68 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 118
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 68 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 118
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
++ +LLG G FG V G A+K L + + + E VTE + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL-DWTTRFNIAIATAQGI 617
L Y + +RL V E+ G L + H R+RV + RF A +
Sbjct: 68 TAL-KYAFQTHDRLCFVMEYANGGEL-------FFHLSRERVFTEERARFYGA-EIVSAL 118
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
Y H + +++ DIK EN++LD++ K++DFGL K G + GT YLAP
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
Query: 678 EWVSNRPITVKADVYSYGMLLLEIVGGR 705
E + + D + G+++ E++ GR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRV---LPHGEKEFVTE--VNTIGSMHHMNLV 562
+++G GGFG VY D G + A+K LD+ + GE + E + ++ S +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 563 RLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVL--DWTTRFNIAIATAQGIAY 619
Y ++L + + M G L YH + + RF A G+ +
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDL------HYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 620 FHEQCRNR-IIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--HSQVVTMVRGTRGYLA 676
H NR +++ D+KP NILLDE+ ++SD GLA ++ H+ V GT GY+A
Sbjct: 308 MH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHGYMA 358
Query: 677 PEWVSN-RPITVKADVYSYGMLLLEIVGG----------------RRNLDMSGDAEDFFY 719
PE + AD +S G +L +++ G R L M+ + D F
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
Query: 720 PGWAFKEMTNGTPLKVADRRL----EGAVEEEE 748
P + + G + +RRL GA E +E
Sbjct: 419 P--ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEV 550
PV++ YR+ ++ + LG G FG V++ G AVKK+ + E E+
Sbjct: 83 PVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----EL 136
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTT 605
+ +V L G EG + E ++ GSL + + P DR L +
Sbjct: 137 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE----DRALYYLG 192
Query: 606 RFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-PKVSDFGLAKLM---GREH 661
+ +G+ Y H + RI+H D+K +N+LL + + DFG A + G
Sbjct: 193 Q------ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 243
Query: 662 SQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
S + + GT ++APE V R K DV+S ++L ++ G
Sbjct: 244 SLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 24/213 (11%)
Query: 508 AQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-HMNLVRLC 565
++LLG G + V SL +G AVK +++ H EV T+ + N++ L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
+ + + LV+E ++ GS+ I H +R R A + + H +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR-----DVAAALDFLHTK-- 130
Query: 626 NRIIHCDIKPENILLD--ENFCP-KVSDFGLAKLMGREHSQV------VTMVRGTRGYLA 676
I H D+KPENIL + E P K+ DF L M +S +T G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 677 PEWVSNRPITV-----KADVYSYGMLLLEIVGG 704
PE V + D++S G++L ++ G
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRV---LPHGEKEFVTE--VNTIGSMHHMNLV 562
+++G GGFG VY D G + A+K LD+ + GE + E + ++ S +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 563 RLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVL--DWTTRFNIAIATAQGIAY 619
Y ++L + + M G L YH + + RF A G+ +
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDL------HYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 620 FHEQCRNR-IIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--HSQVVTMVRGTRGYLA 676
H NR +++ D+KP NILLDE+ ++SD GLA ++ H+ V GT GY+A
Sbjct: 308 MH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHGYMA 358
Query: 677 PEWVSN-RPITVKADVYSYGMLLLEIVGG----------------RRNLDMSGDAEDFFY 719
PE + AD +S G +L +++ G R L M+ + D F
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
Query: 720 PGWAFKEMTNGTPLKVADRRL----EGAVEEEE 748
P + + G + +RRL GA E +E
Sbjct: 419 P--ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRV---LPHGEKEFVTE--VNTIGSMHHMNLV 562
+++G GGFG VY D G + A+K LD+ + GE + E + ++ S +
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 563 RLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVL--DWTTRFNIAIATAQGIAY 619
Y ++L + + M G L YH + + RF A G+ +
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDL------HYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 620 FHEQCRNR-IIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--HSQVVTMVRGTRGYLA 676
H NR +++ D+KP NILLDE+ ++SD GLA ++ H+ V GT GY+A
Sbjct: 308 MH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHGYMA 358
Query: 677 PEWVSN-RPITVKADVYSYGMLLLEIVGG----------------RRNLDMSGDAEDFFY 719
PE + AD +S G +L +++ G R L M+ + D F
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
Query: 720 PGWAFKEMTNGTPLKVADRRL----EGAVEEEE 748
P + + G + +RRL GA E +E
Sbjct: 419 P--ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Query: 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRV---LPHGEKEFVTE--VNTIGSMHHMNLV 562
+++G GGFG VY D G + A+K LD+ + GE + E + ++ S +
Sbjct: 194 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 563 RLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVL--DWTTRFNIAIATAQGIAY 619
Y ++L + + M G L YH + + RF A G+ +
Sbjct: 254 VCMSYAFHTPDKLSFILDLMNGGDL------HYHLSQHGVFSEADMRF-YAAEIILGLEH 306
Query: 620 FHEQCRNR-IIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--HSQVVTMVRGTRGYLA 676
H NR +++ D+KP NILLDE+ ++SD GLA ++ H+ V GT GY+A
Sbjct: 307 MH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-----GTHGYMA 357
Query: 677 PEWVSN-RPITVKADVYSYGMLLLEIVGG----------------RRNLDMSGDAEDFFY 719
PE + AD +S G +L +++ G R L M+ + D F
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 417
Query: 720 PGWAFKEMTNGTPLKVADRRL----EGAVEEEE 748
P + + G + +RRL GA E +E
Sbjct: 418 P--ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 448
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H N++ L +G +V E MK G L I R + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-----RQKFFSEREASAVLFTITKT 128
Query: 617 IAYFHEQCRNRIIHCDIKPENIL-LDENFCP---KVSDFGLAKLMGREHSQVVTMVRGTR 672
+ Y H Q ++H D+KP NIL +DE+ P ++ DFG AK + E+ ++T T
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TA 184
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++APE + + D++S G+LL ++ G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEV 550
PV++ YR+ ++ + LG G FG V++ G AVKK+ + E E+
Sbjct: 64 PVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----EL 117
Query: 551 NTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWI-----FPSYHHRDRVLDWTT 605
+ +V L G EG + E ++ GSL + + P DR L +
Sbjct: 118 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE----DRALYYLG 173
Query: 606 RFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-PKVSDFGLAKLMGREH--S 662
+ +G+ Y H + RI+H D+K +N+LL + + DFG A + +
Sbjct: 174 Q------ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 224
Query: 663 QVVT--MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++T + GT ++APE V R K DV+S ++L ++ G
Sbjct: 225 DLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 102/277 (36%), Gaps = 48/277 (17%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH 558
D+ +L+G G FG VY G + + ++R K F EV H
Sbjct: 29 DIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 559 MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
N+V G C + ++ K +L + VLD IA +G+
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTL----YSVVRDAKIVLDVNKTRQIAQEIVKGMG 144
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG------REHSQVVTMVRGTR 672
Y H + I+H D+K +N+ D N ++DFGL + G RE + + G
Sbjct: 145 YLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK--LRIQNGWL 198
Query: 673 GYLAPEWVSN---------RPITVKADVYSYGMLLLEI--------------------VG 703
+LAPE + P + +DV++ G + E+ G
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258
Query: 704 GRRNLD---MSGDAEDFFYPGWAFKEMTNGTPLKVAD 737
+ NL M + D WAF++ T K+ D
Sbjct: 259 MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 511 LGTGGFGSVYK------GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G F V + G ++ KKL ++ E + H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRL 68
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
SE LV++ + G L + I ++ + + + Q + +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAR--------EYYSEADASHCIQQILESVNHCH 120
Query: 625 RNRIIHCDIKPENILL---DENFCPKVSDFGLA-KLMGREHSQVVTMVRGTRGYLAPEWV 680
N I+H D+KPEN+LL + K++DFGLA ++ G + Q GT GYL+PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLSPEVL 178
Query: 681 SNRPITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
P D+++ G++L ++ G R + A DF P W
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
+ +LLG G FG V G A+K L + + + E +TE + + H L
Sbjct: 151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL--DWTTRFNIAIATAQG 616
L Y + +RL V E+ G L + H R+RV D + I +A
Sbjct: 211 TAL-KYSFQTHDRLCFVMEYANGGEL-------FFHLSRERVFSEDRARFYGAEIVSA-- 260
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y H + +++ D+K EN++LD++ K++DFGL K ++ + + T GT YLA
Sbjct: 261 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLA 317
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + + D + G+++ E++ GR
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
+ +LLG G FG V G A+K L + + + E +TE + + H L
Sbjct: 154 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL--DWTTRFNIAIATAQG 616
L Y + +RL V E+ G L + H R+RV D + I +A
Sbjct: 214 TAL-KYSFQTHDRLCFVMEYANGGEL-------FFHLSRERVFSEDRARFYGAEIVSA-- 263
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y H + +++ D+K EN++LD++ K++DFGL K ++ + + T GT YLA
Sbjct: 264 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLA 320
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + + D + G+++ E++ GR
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+++L + LV++ MK G L F + + + TR I A + I
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETR-KIMRALLEVI 124
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
H + I+H D+KPENILLD++ K++DFG + + + + + V GT YLAP
Sbjct: 125 CALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 179
Query: 678 EWVS-----NRP-ITVKADVYSYGMLLLEIVGG 704
E + N P + D++S G+++ ++ G
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 625 RNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+NRIIHCD+KPENILL + KV DFG + EH +V T ++ +R Y APE +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 683 RPITVKADVYSYGMLLLEIVGG 704
+ D++S G +L E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 625 RNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+NRIIHCD+KPENILL + KV DFG + EH +V T ++ +R Y APE +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 683 RPITVKADVYSYGMLLLEIVGG 704
+ D++S G +L E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
+ +LLG G FG V G A+K L + + + E +TE + + H L
Sbjct: 12 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL--DWTTRFNIAIATAQG 616
L Y + +RL V E+ G L + H R+RV D + I +A
Sbjct: 72 TAL-KYSFQTHDRLCFVMEYANGGEL-------FFHLSRERVFSEDRARFYGAEIVSA-- 121
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y H + +++ D+K EN++LD++ K++DFGL K G + + GT YLA
Sbjct: 122 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 178
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + + D + G+++ E++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+++L + LV++ MK G L F + + + TR I A + I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETR-KIMRALLEVI 137
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
H + I+H D+KPENILLD++ K++DFG + + + + + V GT YLAP
Sbjct: 138 CALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRSVCGTPSYLAP 192
Query: 678 EWVS-----NRP-ITVKADVYSYGMLLLEIVGG 704
E + N P + D++S G+++ ++ G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617
H N+++L + LV++ MK G L F + + + TR I A + I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETR-KIMRALLEVI 137
Query: 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
H + I+H D+KPENILLD++ K++DFG + + + + + V GT YLAP
Sbjct: 138 CALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 192
Query: 678 EWVS-----NRP-ITVKADVYSYGMLLLEIVGG 704
E + N P + D++S G+++ ++ G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
+ +LLG G FG V G A+K L + + + E +TE + + H L
Sbjct: 11 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL--DWTTRFNIAIATAQG 616
L Y + +RL V E+ G L + H R+RV D + I +A
Sbjct: 71 TAL-KYSFQTHDRLCFVMEYANGGEL-------FFHLSRERVFSEDRARFYGAEIVSA-- 120
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y H + +++ D+K EN++LD++ K++DFGL K G + + GT YLA
Sbjct: 121 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 177
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + + D + G+++ E++ GR
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 506 NFAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEF---VTEVNTIGSMHHMNL 561
+ +LLG G FG V G A+K L + + + E +TE + + H L
Sbjct: 13 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 562 VRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHH--RDRVL--DWTTRFNIAIATAQG 616
L Y + +RL V E+ G L + H R+RV D + I +A
Sbjct: 73 TAL-KYSFQTHDRLCFVMEYANGGEL-------FFHLSRERVFSEDRARFYGAEIVSA-- 122
Query: 617 IAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
+ Y H + +++ D+K EN++LD++ K++DFGL K G + + GT YLA
Sbjct: 123 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 179
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGGR 705
PE + + D + G+++ E++ GR
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 511 LGTGGFGSVYK------GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G F V + G ++ KKL ++ E + H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRL 68
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
SE LV++ + G L + I ++ + + + Q + +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAR--------EYYSEADASHCIQQILESVNHCH 120
Query: 625 RNRIIHCDIKPENILL---DENFCPKVSDFGLA-KLMGREHSQVVTMVRGTRGYLAPEWV 680
N I+H D+KPEN+LL + K++DFGLA ++ G + Q GT GYL+PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLSPEVL 178
Query: 681 SNRPITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
P D+++ G++L ++ G R + A DF P W
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 511 LGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMNLVRLC-GY 567
+G+G G V+K G ++AVK++ R E K + +++ + H + C G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
++ + E M + +R+L T +A + + Y E ++
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMT-----VAIVKALYYLKE--KHG 145
Query: 628 IIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS----NR 683
+IH D+KP NILLDE K+ DFG++ + + ++ + G Y+APE + +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203
Query: 684 P-ITVKADVYSYGMLLLEIVGGR 705
P ++ADV+S G+ L+E+ G+
Sbjct: 204 PDYDIRADVWSLGISLVELATGQ 226
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKL--DRVLPHGEKEFV-----------TEVNTIGSM 556
LG G F +V+ + + T VA+K + D+V ++ + T+ +++G+
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 557 HHMNLVRLCGYCS-EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H + L+ + G + ++V+E + L + Y HR L + + I+
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQ--ISKQLLL 142
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLD-----ENFCP-KVSDFGLAKLMGREHSQVVTMVR 669
G+ Y H +C IIH DIKPEN+L++ EN K++D G A ++ +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ--- 197
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
TR Y +PE + P AD++S L+ E++ G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKL--DRVLPHGEKEFV-----------TEVNTIGSM 556
LG G F +V+ + + T VA+K + D+V ++ + T+ +++G+
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 557 HHMNLVRLCGYCS-EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
H + L+ + G + ++V+E + L + Y HR L + + I+
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQ--ISKQLLL 142
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLD-----ENFCP-KVSDFGLAKLMGREHSQVVTMVR 669
G+ Y H +C IIH DIKPEN+L++ EN K++D G A ++ +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ--- 197
Query: 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
TR Y +PE + P AD++S L+ E++ G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 511 LGTGGFGSVYK------GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G F V + G ++ KKL ++ E + H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRL 86
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
SE + L+++ + G L + I ++ + + + + + H+
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-----ADASHCIQQILEAVLHCHQMG 141
Query: 625 RNRIIHCDIKPENILLDENF---CPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
++H D+KPEN+LL K++DFGLA + E Q GT GYL+PE +
Sbjct: 142 ---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSPEVLR 197
Query: 682 NRPITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
P D+++ G++L ++ G R + A DF P W
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 43/223 (19%)
Query: 509 QLLGTGGFGSV-YKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G G+V ++GS G VAVK++ D L E + +TE S H N++
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL--MEIKLLTE-----SDDHPNVI 90
Query: 563 RLCGYCSEGSNRLLVYEF-MKNGSLDKWIFPSYHHRDRVLDWTTRFN---IAIATAQGIA 618
R YCSE ++R L + N +L + S + D L +N + A G+A
Sbjct: 91 RY--YCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 619 YFHEQCRNRIIHCDIKPENILLD-------------ENFCPKVSDFGLAKLMGREHSQVV 665
+ H +IIH D+KP+NIL+ EN +SDFGL K +
Sbjct: 148 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 666 TMVR---GTRGYLAPEWV---SNRPITVKADVYSYGMLLLEIV 702
+ GT G+ APE + + R +T D++S G + I+
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVT-EVNTIGSMHHMNLVRLCGY 567
+++G G FG V++ L + VA+KK+ + +K F E+ + + H N+V L +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 568 C-SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ---GIAYFHEQ 623
S G + V+ + + + ++ + H ++ I + Q +AY H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 624 CRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
I H DIKP+N+LLD + K+ DFG AK++ V + +R Y APE +
Sbjct: 161 G---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPELIFG 215
Query: 683 RP-ITVKADVYSYGMLLLEIVGGR 705
T D++S G ++ E++ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ FGLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 506 NFAQLLGTGGFG--SVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+F + +G+G FG + + L LVAVK ++R E E+ S+ H N+VR
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVR 80
Query: 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623
++ ++ E+ G L + I + R + RF G++Y H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERIC----NAGRFSEDEARFFFQ-QLLSGVSYCHSM 135
Query: 624 CRNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
+I H D+K EN LLD + P K+ DFG +K HSQ + V GT Y+APE +
Sbjct: 136 ---QICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLL 190
Query: 682 NRPITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
+ K ADV+S G+ L ++ G + + D+
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 43/223 (19%)
Query: 509 QLLGTGGFGSV-YKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G G+V ++GS G VAVK++ D L E + +TE S H N++
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL--MEIKLLTE-----SDDHPNVI 90
Query: 563 RLCGYCSEGSNRLLVYEF-MKNGSLDKWIFPSYHHRDRVLDWTTRFN---IAIATAQGIA 618
R YCSE ++R L + N +L + S + D L +N + A G+A
Sbjct: 91 RY--YCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 619 YFHEQCRNRIIHCDIKPENILLD-------------ENFCPKVSDFGLAKLMGREHSQVV 665
+ H +IIH D+KP+NIL+ EN +SDFGL K +
Sbjct: 148 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 666 TMVR---GTRGYLAPEWV---SNRPITVKADVYSYGMLLLEIV 702
+ GT G+ APE + + R +T D++S G + I+
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ D GLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ DF LA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 511 LGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
+G G FG + LVAVK ++R GEK E+ S+ H N+VR
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
++ +V E+ G L F + R + RF G++Y H
Sbjct: 83 VILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQ-QLISGVSYAHAM--- 134
Query: 627 RIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
++ H D+K EN LLD + P K++DFG +K HSQ + V GT Y+APE + +
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAV-GTPAYIAPEVLLKKE 192
Query: 685 ITVK-ADVYSYGMLLLEIVGG 704
K ADV+S G+ L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ D GLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 47/227 (20%)
Query: 511 LGTGGFGSVYKGSLGDG-TLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G G +G+V+K + +VA+K++ D +P + E+ + + H N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---LREICLLKELKHKNIVRL 66
Query: 565 CGYCSEGSNRLLVYEFMK----------NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
LV+EF NG LD I S+
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---------------LFQLL 111
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG---REHS-QVVTMVRG 670
+G+ + H RN ++H D+KP+N+L++ N K+++FGLA+ G R +S +VVT+
Sbjct: 112 KGLGFCHS--RN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL--- 165
Query: 671 TRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716
Y P+ + + + D++S G + E+ R L D +D
Sbjct: 166 --WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 511 LGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
+G+G FG + LVAVK ++R GEK E+ S+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
++ +V E+ G L F + R + RF G++Y H
Sbjct: 83 VILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQ-QLISGVSYCHAM--- 134
Query: 627 RIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
++ H D+K EN LLD + P K+ DFG +K HSQ + V GT Y+APE + +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLKKE 192
Query: 685 ITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
K ADV+S G+ L ++ G + + ++F
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN---LVRLC 565
LG G +G V K + G ++AVK++ + E K + +++ SM ++ V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 116
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G + + E M + SLDK+ + + + + IA++ + + + H +
Sbjct: 117 GALFREGDVWICMELM-DTSLDKF-YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV----S 681
+IH D+KP N+L++ K+ DFG++ + S T+ G + Y+APE + +
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPELN 230
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
+ +VK+D++S G+ ++E+ R F Y W GTP ++L+
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILR-----------FPYDSW-------GTPF----QQLK 268
Query: 742 GAVEE 746
VEE
Sbjct: 269 QVVEE 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 511 LGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
+G+G FG + LVAVK ++R GEK E+ S+ H N+VR
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
++ +V E+ G L F + R + RF G++Y H
Sbjct: 82 VILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQ-QLISGVSYCHAM--- 133
Query: 627 RIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
++ H D+K EN LLD + P K+ DFG +K HSQ + V GT Y+APE + +
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLKKE 191
Query: 685 ITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
K ADV+S G+ L ++ G + + ++F
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
+G+G +GSV G VAVKKL R + H ++ + E+ + M H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 567 YCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621
+ E N + + + L+ + ++ D +F I +G+ Y H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 622 EQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
IIH D+KP N+ ++E+ K+ D GLA+ E + V TR Y APE +
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 682 N-RPITVKADVYSYGMLLLEIVGGR 705
N D++S G ++ E++ GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 31/224 (13%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH 557
+L++R ++L GGF VY+ +G G A+K+L + + EV + +
Sbjct: 27 ELRLRVR---RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 558 -HMNLVRLCGYCSEGSNR--------LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
H N+V+ C S G LL+ E K ++ F L T
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE---FLKKMESRGPLSCDTVLK 140
Query: 609 IAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR-------EH 661
I T + + + H Q + IIH D+K EN+LL K+ DFG A +
Sbjct: 141 IFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 662 SQVVTMVRGTRG----YLAPEWV---SNRPITVKADVYSYGMLL 698
+ + TR Y PE + SN PI K D+++ G +L
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL----- 564
LG GG G V+ D VA+KK+ P K + E+ I + H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 565 ---------CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615
G +E ++ +V E+M+ + + +L+ R +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD------LANVLEQGPLLEEHARL-FMYQLLR 131
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVVTMVRG--TR 672
G+ Y H ++H D+KP N+ ++ E+ K+ DFGLA++M +S + G T+
Sbjct: 132 GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 673 GYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
Y +P +S T D+++ G + E++ G+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFV--TEVNTIGSMHHMNLVR 563
+ +G G +G V+ G G VAVK E + TE+ M H N++
Sbjct: 40 QMVKQIGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILG 95
Query: 564 LCGYCSEGS----NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAY 619
+G+ L+ ++ +NGSL ++ + LD + +A ++ G+ +
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSGLCH 149
Query: 620 FHE-----QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV----VTMVRG 670
H Q + I H D+K +NIL+ +N ++D GLA + ++V T V G
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-G 208
Query: 671 TRGYLAPEWVS---NR---PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720
T+ Y+ PE + NR + AD+YS+G++L E+ RR + G E++ P
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVS-GGIVEEYQLP 261
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--VTMVRGTR 672
+G+ Y H ++H D+KP N+L++ K+ DFGLA++ EH +T TR
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 25/228 (10%)
Query: 511 LGTGGFGSVYKGSLGDGTLVAVKKL---DRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGY 567
LG G F V + T K+ ++ ++ E + H N+VRL
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
SE LV++ + G L + I ++ + + + Q + + ++
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAR--------EYYSEADASHCIHQILESVNHIHQHD 150
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
I+H D+KPEN+LL + K++DFGLA + E Q GT GYL+PE + P
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE-QQAWFGFAGTPGYLSPEVLRKDP 209
Query: 685 ITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
D+++ G++L ++ G + + A DF P W
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEW 257
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 625 RNRIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682
+NRIIHCD+KPENILL + KV DFG + EH +V ++ +R Y APE +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQ-SRFYRAPEVILG 273
Query: 683 RPITVKADVYSYGMLLLEIVGG 704
+ D++S G +L E++ G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 511 LGTGGFGSVYKG--SLGDGTLVAVKKLDRVLPHGEKEF----VTEVNTIGSMHHMNLVRL 564
LG G +G VYK ++ + T VA+K++ L H E+ + EV+ + + H N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNET-VAIKRIR--LEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF--NIAIATAQGIAYFHE 622
L++E+ +N L K++ D+ D + R + G+ + H
Sbjct: 99 KSVIHHNHRLHLIFEYAEN-DLKKYM-------DKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 623 QCRNRIIHCDIKPENILL---DENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAP 677
+ R +H D+KP+N+LL D + P K+ DFGLA+ G Q + T Y P
Sbjct: 151 R---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI-ITLWYRPP 206
Query: 678 E-WVSNRPITVKADVYSYGMLLLEIV 702
E + +R + D++S + E++
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 607 FNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666
+I I A+ + + H + ++H D+KP NI + KV DFGL M ++ +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 667 MVR-----------GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702
+ GT+ Y++PE + + K D++S G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 20/198 (10%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSMHHMNLVRLCG 566
+G G FG+VY + + +VA+KK+ ++ + EV + + H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
LV E+ + D H + L + QG+AY H +
Sbjct: 122 CYLREHTAWLVMEYCLGSASD---LLEVHKKP--LQEVEIAAVTHGALQGLAYLHS---H 173
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV---SNR 683
+IH D+K NILL E K+ DFG A +M + V GT ++APE +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 228
Query: 684 PITVKADVYSYGMLLLEI 701
K DV+S G+ +E+
Sbjct: 229 QYDGKVDVWSLGITCIEL 246
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 47/228 (20%)
Query: 509 QLLGTGGFGSV-YKGSLGDGTLVAVKKL-----DRVLPHGEKEFVTEVNTIGSMHHMNLV 562
++LG G G+V ++GS G VAVK++ D L E + +TE S H N++
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL--MEIKLLTE-----SDDHPNVI 72
Query: 563 RLCGYCSEGSNRLLVYEF-MKNGSLDKWIFPSYHHRDRVLDWTTRFN---IAIATAQGIA 618
R YCSE ++R L + N +L + S + D L +N + A G+A
Sbjct: 73 RY--YCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 619 YFHEQCRNRIIHCDIKPENILLD-------------ENFCPKVSDFGLAKLMGREHSQVV 665
+ H +IIH D+KP+NIL+ EN +SDFGL K +
Sbjct: 130 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 666 TMVR---GTRGYLAPEWV-------SNRPITVKADVYSYGMLLLEIVG 703
+ GT G+ APE + + R +T D++S G + I+
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 20/198 (10%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSMHHMNLVRLCG 566
+G G FG+VY + + +VA+KK+ ++ + EV + + H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
LV E+ + D H + L + QG+AY H +
Sbjct: 83 CYLREHTAWLVMEYCLGSASD---LLEVHKKP--LQEVEIAAVTHGALQGLAYLHS---H 134
Query: 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV---SNR 683
+IH D+K NILL E K+ DFG A +M + V GT ++APE +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 189
Query: 684 PITVKADVYSYGMLLLEI 701
K DV+S G+ +E+
Sbjct: 190 QYDGKVDVWSLGITCIEL 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 511 LGTGGFGSVYK------GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564
LG G F V + G ++ KKL ++ E + H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKLEREARICRLLKHPNIVRL 75
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
SE + L+++ + G L + I ++ + + + + + H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-----ADASHCIQQILEAVLHCHQMG 130
Query: 625 RNRIIHCDIKPENILLDENF---CPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS 681
++H ++KPEN+LL K++DFGLA + E Q GT GYL+PE +
Sbjct: 131 ---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSPEVLR 186
Query: 682 NRPITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
P D+++ G++L ++ G R + A DF P W
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 237
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEF----VTEVNTI 553
D Q+++ LLG G +G V + G +VA+KK++ P + F + E+ +
Sbjct: 12 DFQLKS-----LLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKIL 63
Query: 554 GSMHHMNLVRLCGY----CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
H N++ + E N + + + + L + I D + + +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR---------- 659
A+ G + +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 124 AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 660 EHSQVVTMVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ S +V V TR Y APE +++ + DV+S G +L E+ R
Sbjct: 175 QQSGMVEFV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 312
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 313 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI 590
L G C++ G +++ EF K G+L ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 310
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 311 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI 590
L G C++ G +++ EF K G+L ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFV----TEVNTIGSMHHMN---- 560
L+G G FG V K + VA+K + +K F+ EV + M+ +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 561 --LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+V L + ++ LV+E + D + + + R L+ T +F + TA
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRKFAQQMCTA---L 170
Query: 619 YFHEQCRNRIIHCDIKPENILL--DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
F IIHCD+KPENILL + K+ DFG + +G+ Q + +R Y +
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQ----SRFYRS 226
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGG 704
PE + P + D++S G +L+E+ G
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--GREHSQVVTMVRGTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H+ +T TR
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 44/232 (18%)
Query: 507 FAQLLGTGGFGSV-YKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH----HMNL 561
F Q LG GGF V L DG A+K R+L H E++ E MH H N+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALK---RILCH-EQQDREEAQREADMHRLFNHPNI 88
Query: 562 VRLCGYC--SEGSNR--LLVYEFMKNGSL--------DKWIFPSYHHRDRVLDWTTRFNI 609
+RL YC G+ L+ F K G+L DK F + D++L W +
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT---EDQIL-W-----L 139
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG---LAKLMGREHSQVVT 666
+ +G+ H + H D+KP NILL + P + D G A + Q +T
Sbjct: 140 LLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT 196
Query: 667 M-----VRGTRGYLAPEWVSNRP---ITVKADVYSYGMLLLEIVGGRRNLDM 710
+ R T Y APE S + I + DV+S G +L ++ G DM
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL EN K+ DFGLA+ + + V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEI--VGG 704
R ++APE + ++ + K+DV+SYG+LL EI +GG
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 511 LGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + S VAVK L E K +TE+ + + HH+N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 563 RLCGYCS-EGSNRLLVYEFMKNGSLDKWI 590
L G C+ +G +++ E+ K G+L ++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 303
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 304 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI 590
L G C++ G +++ EF K G+L ++
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM-V 668
+ A+G+ + + + IH D+ NILL E K+ DFGLA+ + ++ V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 669 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE-- 726
R ++APE + +R T+++DV+S+G+LL EI +L S YPG E
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF----SLGASP------YPGVKIDEEF 305
Query: 727 ---MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777
+ GT ++ D E+ + M C E RP+ E+V+ L
Sbjct: 306 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 511 LGTGGFGSVYKG-SLG-DGT----LVAVKKLDRVLPHGE-KEFVTEVNTIGSM-HHMNLV 562
LG G FG V + + G D T VAVK L H E + ++E+ + + HH+N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 563 RLCGYCSE-GSNRLLVYEFMKNGSLDKWI 590
L G C++ G +++ EF K G+L ++
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G +GSV Y L VAVKKL R L H + + E+ + + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ ++ E +L + + D +F + +G+ Y H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIHSAG 151
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN-R 683
IIH D+KP N+ ++E+ ++ DFGLA R+ + +T TR Y APE + N
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 684 PITVKADVYSYGMLLLEIVGGR 705
D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM---GREHSQVVTMVRGT 671
+G+ Y H ++IH D+KP N+L++EN K+ DFG+A+ + EH +T T
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 672 RGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRR 706
R Y APE +S T D++S G + E++ R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 39/245 (15%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMHHMN---LVRLC 565
LG G +G V K + G ++AVK++ + E K + +++ SM ++ V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 72
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
G + + E M + SLDK+ + + + + IA++ + + + H +
Sbjct: 73 GALFREGDVWICMELM-DTSLDKF-YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV----S 681
+IH D+KP N+L++ K+ DFG++ + + ++ + G + Y+APE + +
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPELN 186
Query: 682 NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741
+ +VK+D++S G+ ++E+ R F Y W GTP ++L+
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILR-----------FPYDSW-------GTPF----QQLK 224
Query: 742 GAVEE 746
VEE
Sbjct: 225 QVVEE 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM---GREHSQVVTMVRGT 671
+G+ Y H ++IH D+KP N+L++EN K+ DFG+A+ + EH +T T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 672 RGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGRR 706
R Y APE +S T D++S G + E++ R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 557 HHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG 616
H N++ L +G +V E K G L I R + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-----RQKFFSEREASAVLFTITKT 128
Query: 617 IAYFHEQCRNRIIHCDIKPENIL-LDENFCP---KVSDFGLAKLMGREHSQVVTMVRGTR 672
+ Y H Q ++H D+KP NIL +DE+ P ++ DFG AK + E+ + T T
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TA 184
Query: 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
++APE + + D++S G+LL + G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFV----TEVNTIGSMHHMN---- 560
L+G G FG V K + VA+K + +K F+ EV + M+ +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 561 --LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+V L + ++ LV+E + D + + + R L+ T +F + TA
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRKFAQQMCTA---L 170
Query: 619 YFHEQCRNRIIHCDIKPENILL--DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
F IIHCD+KPENILL + K+ DFG + +G+ Q + +R Y +
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ----SRFYRS 226
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGG 704
PE + P + D++S G +L+E+ G
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVT----EVNTIGSMHHMNLVRLC 565
+G+G +GSV G VA+KKL R P + F E+ + M H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSR--PFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN------IAIATAQGIAY 619
+ S+ Y+F ++ + D +F+ + +G+ Y
Sbjct: 90 DVFTPASSLRNFYDF--------YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
H ++H D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE
Sbjct: 142 IHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEV 194
Query: 680 V-SNRPITVKADVYSYGMLLLEIVGGR 705
+ S D++S G ++ E++ G+
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVVAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 565 CGY------CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-------QMELDHERMSYLLYQMLVGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G+++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 21/233 (9%)
Query: 494 NFTYRDLQIRTSNFA--QLLGTGGFGSVY---KGSLGD-GTLVAVKKLDRVL----PHGE 543
N T ++ NF ++LGTG +G V+ K S D G L A+K L +
Sbjct: 43 NLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT 102
Query: 544 KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL-LVYEFMKNGSLDKWIFPSYHHRDRVLD 602
+ TE + + + Y + +L L+ +++ G L F R+R
Sbjct: 103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERF-- 156
Query: 603 WTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662
T + I + + + II+ DIK ENILLD N ++DFGL+K + +
Sbjct: 157 --TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Query: 663 QVVTMVRGTRGYLAPEWV--SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGD 713
+ GT Y+AP+ V + D +S G+L+ E++ G + G+
Sbjct: 215 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 510 LLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFV----TEVNTIGSMHHMN---- 560
L+G G FG V K + VA+K + +K F+ EV + M+ +
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 561 --LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+V L + ++ LV+E + D + + + R L+ T +F + TA
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRKFAQQMCTA---L 151
Query: 619 YFHEQCRNRIIHCDIKPENILL--DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLA 676
F IIHCD+KPENILL + K+ DFG + +G+ Q + +R Y +
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ----SRFYRS 207
Query: 677 PEWVSNRPITVKADVYSYGMLLLEIVGG 704
PE + P + D++S G +L+E+ G
Sbjct: 208 PEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV--AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568
+G G +G V K ++ GT + A KK+ + F E+ + S+ H N++RL
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 569 SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRI 628
+ ++ LV E G L F H+ RV + I +AY H + +
Sbjct: 76 EDNTDIYLVMELCTGGEL----FERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNV 127
Query: 629 IHCDIKPENILL--DENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
H D+KPEN L D P K+ DFGLA + +++ GT Y++P+ +
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVLEGL-Y 184
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
+ D +S G+++ ++ G D E
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXE 214
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 511 LGTGGFGSVYKGSLGDGTLV--AVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568
+G G +G V K ++ GT + A KK+ + F E+ + S+ H N++RL
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 569 SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRI 628
+ ++ LV E G L F H+ RV + I +AY H + +
Sbjct: 93 EDNTDIYLVMELCTGGEL----FERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNV 144
Query: 629 IHCDIKPENILL--DENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
H D+KPEN L D P K+ DFGLA + +++ GT Y++P+ V
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQ-VLEGLY 201
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAE 715
+ D +S G+++ ++ G D E
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 502 IRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMH 557
+R + LG G +G V+K G +VAVKK+ + ++ F E+ + +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELS 66
Query: 558 -HMNLVRLCGYCSEGSNR--LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATA 614
H N+V L ++R LV+++M+ L I R +L+ + +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVI------RANILEPVHKQYVVYQLI 119
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK-------------LMGREH 661
+ I Y H ++H D+KP NILL+ KV+DFGL++ L E+
Sbjct: 120 KVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 662 SQ-------VVTMVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
++ ++T TR Y APE + + T D++S G +L EI+ G+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G +GSV Y L VAVKKL R L H + + E+ + + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ ++ E +L + + D +F + +G+ Y H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHSAG 143
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN-R 683
IIH D+KP N+ ++E+ ++ DFGLA+ E + V TR Y APE + N
Sbjct: 144 ---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV----ATRWYRAPEIMLNWM 196
Query: 684 PITVKADVYSYGMLLLEIVGGR 705
D++S G ++ E++ G+
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-------QMELDHERMSYLLYQMLXGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 530 VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCS------EGSNRLLVYEF 580
VA+KKL R H ++ + E+ + ++H N++ L + E + +V E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640
M + +L + I LD + GI + H IIH D+KP NI++
Sbjct: 111 M-DANLSQVI-------QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVV 159
Query: 641 DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLE 700
+ K+ DFGLA+ G S ++T TR Y APE + D++S G+++ E
Sbjct: 160 KSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 701 IVGG 704
++ G
Sbjct: 218 MIKG 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G +GSV Y L VAVKKL R L H + + E+ + + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC 624
+ ++ E +L + + D +F + +G+ Y H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHSAG 151
Query: 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN-R 683
IIH D+KP N+ ++E+ ++ DFGLA R+ + +T TR Y APE + N
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 684 PITVKADVYSYGMLLLEIVGGR 705
D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVT----EVNTIGSMHHMNLVRLC 565
+G+G +GSV G VA+KKL R P + F E+ + M H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSR--PFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN------IAIATAQGIAY 619
+ S+ Y+F ++ + D F+ + +G+ Y
Sbjct: 108 DVFTPASSLRNFYDF--------YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 620 FHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
H ++H D+KP N+ ++E+ K+ DFGLA+ E + V TR Y APE
Sbjct: 160 IHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEV 212
Query: 680 V-SNRPITVKADVYSYGMLLLEIVGGR 705
+ S D++S G ++ E++ G+
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEF----VTEVNTI 553
D Q+++ LLG G +G V + G +VA+KK++ P + F + E+ +
Sbjct: 12 DFQLKS-----LLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKIL 63
Query: 554 GSMHHMNLVRLCGY----CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
H N++ + E N + + + + L + I D + + +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--------- 660
A+ G + +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 124 AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 661 HSQVVTMVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
+T TR Y APE +++ + DV+S G +L E+ R
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 499 DLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEF----VTEVNTI 553
D Q+++ LLG G +G V + G +VA+KK++ P + F + E+ +
Sbjct: 12 DFQLKS-----LLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKIL 63
Query: 554 GSMHHMNLVRLCGY----CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609
H N++ + E N + + + + L + I D + + +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE--------- 660
A+ G + +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 124 AVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 661 HSQVVTMVRGTRGYLAPE-WVSNRPITVKADVYSYGMLLLEIVGGR 705
+T TR Y APE +++ + DV+S G +L E+ R
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 511 LGTGGFG----SVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCG 566
LG G F V+K S AVK + + + ++ +T + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKS---NQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHE 73
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
+ + LV E + G L + I H + + R +++ H+
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAVSHMHDV--- 125
Query: 627 RIIHCDIKPENILL---DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
++H D+KPEN+L ++N K+ DFG A+L ++ + T T Y APE ++
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQN 184
Query: 684 PITVKADVYSYGMLLLEIVGGR-------RNLDMSGDAE--------DFFYPGWAFKEMT 728
D++S G++L ++ G+ R+L + E DF + G A+K ++
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244
Query: 729 N 729
Sbjct: 245 Q 245
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-------QMELDHERMSYLLYQMLXGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR--GTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H + TR
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVR--GTR 672
+G+ Y H ++H D+KP N+LL+ K+ DFGLA++ +H + TR
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 673 GYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR 705
Y APE + N + T D++S G +L E++ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 511 LGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
+G+G FG + LVAVK ++R GEK E+ S+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
++ +V E+ G L F + R + RF G++Y H
Sbjct: 83 VILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQ-QLISGVSYCHAM--- 134
Query: 627 RIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
++ H D+K EN LLD + P K+ FG +K HSQ + V GT Y+APE + +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKSTV-GTPAYIAPEVLLKKE 192
Query: 685 ITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
K ADV+S G+ L ++ G + + ++F
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 483 ENSLIVCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG 542
E S+++ G ++F +D+ LG G G++ + D VAVK R+LP
Sbjct: 15 ETSVVIVGK-ISFCPKDV----------LGHGAEGTIVYRGMFDNRDVAVK---RILPEC 60
Query: 543 EKEFVTEVNTI-GSMHHMNLVRLCGYCSEGSNRLLVYEFMK--NGSLDKWIFPSYHHRDR 599
EV + S H N++R +C+E +R Y ++ +L +++ +D
Sbjct: 61 FSFADREVQLLRESDEHPNVIRY--FCTE-KDRQFQYIAIELCAATLQEYV----EQKDF 113
Query: 600 VLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-----NFCPKVSDFGLA 654
+ T G+A+ H I+H D+KP NIL+ +SDFGL
Sbjct: 114 AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170
Query: 655 KLM--GREHSQVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIV 702
K + GR + V GT G++APE +S T D++S G + ++
Sbjct: 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-------QMELDHERMSYLLYQMLXGIK 133
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 511 LGTGGFGSVYKG---SLGDGTLVAVKKLDRVLPHGEKE------FVTEVNTIGSMHHMNL 561
LG+G FG V+ +V K ++VL E E+ + + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 562 VRLCGYCSEGSNRLLVYEFMKNGS-LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF 620
+++ LV E K+GS LD + F H R LD I + Y
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYL 146
Query: 621 HEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV 680
IIH DIK ENI++ E+F K+ DFG A + E ++ GT Y APE +
Sbjct: 147 R---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAPEVL 201
Query: 681 SNRPIT-VKADVYSYGMLLLEIV 702
P + +++S G+ L +V
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 490 GAPVNFTYRDLQIRTSNFAQL--------LGTGGFGSV---YKGSLGDGTLVAVKKLDRV 538
G+ ++ + +Q+ S F L +G+G G V + LG VAVKKL R
Sbjct: 1 GSHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRP 58
Query: 539 LP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCS------EGSNRLLVYEFMKNGSLDKW 589
H ++ + E+ + ++H N++ L + E + LV E M + +L +
Sbjct: 59 FQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQV 116
Query: 590 IFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
I H + LD + GI + H IIH D+KP NI++ + K+
Sbjct: 117 I-----HME--LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 166
Query: 650 DFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
DFGLA+ +V TR Y APE + D++S G ++ E+V G
Sbjct: 167 DFGLARTASTNFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 91/225 (40%), Gaps = 18/225 (8%)
Query: 511 LGTGGFGSVYK-GSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM----HHMNLVRLC 565
LG G +G V+K S DG L AVK+ G K+ ++ +GS H VRL
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625
EG L E SL + W + +A +A+ H Q
Sbjct: 124 QAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLA----LAHLHSQG- 177
Query: 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI 685
++H D+KP NI L K+ DFGL +G + V G Y+APE +
Sbjct: 178 --LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ--EGDPRYMAPELLQGSYG 233
Query: 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730
T ADV+S G+ +LE V L G+ G+ E T G
Sbjct: 234 TA-ADVFSLGLTILE-VACNMELPHGGEGWQQLRQGYLPPEFTAG 276
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIV 702
+ D++S G ++ E+V
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 511 LGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEK---EFVTEVNTIGSMHHMNLVRLCG 566
+G+G FG + LVAVK ++R GEK E+ S+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626
++ +V E+ G L F + R + RF G++Y H
Sbjct: 83 VILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQ-QLISGVSYCHAM--- 134
Query: 627 RIIHCDIKPENILLDENFCP--KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP 684
++ H D+K EN LLD + P K+ FG +K HSQ V GT Y+APE + +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKDTV-GTPAYIAPEVLLKKE 192
Query: 685 ITVK-ADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717
K ADV+S G+ L ++ G + + ++F
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 530 VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGY------CSEGSNRLLVYEF 580
VA+KKL R H ++ + E+ + ++H N++ L E + +V E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640
M + +L + I LD + GI + H IIH D+KP NI++
Sbjct: 111 M-DANLSQVI-------QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVV 159
Query: 641 DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLE 700
+ K+ DFGLA+ G S ++T TR Y APE + D++S G ++ E
Sbjct: 160 KSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 701 IVGG 704
++ G
Sbjct: 218 MIKG 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 98/244 (40%), Gaps = 55/244 (22%)
Query: 511 LGTGGFGSVYKGSLGDGT--LVAVK-----KLDRVLPHGEKEFVTEVNTIGSMHHMNLVR 563
+G G +G V + ++ + T + A+K K+ ++ P + TEV + +HH N+ R
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 564 LCGYCSEGSNRLLVYEFMKNGSL-------------------------------DKWIFP 592
L + LV E G L ++ I
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 593 SYHHRDRVLDWTTR----FNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN--FCP 646
S H LD+ R NI + Y H Q I H DIKPEN L N F
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEI 209
Query: 647 KVSDFGLA----KLMGREHSQVVTMVRGTRGYLAPEWV--SNRPITVKADVYSYGMLLLE 700
K+ DFGL+ KL E+ + T GT ++APE + +N K D +S G+LL
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 701 IVGG 704
++ G
Sbjct: 269 LLMG 272
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H ++V L S +V+EFM L I + D ++
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV-------KRADAGFVYS 130
Query: 609 IAIAT------AQGIAYFHEQCRNRIIHCDIKPENILL--DENFCP-KVSDFGLAKLMGR 659
A+A+ + + Y H+ N IIH D+KP +LL EN P K+ FG+A +G
Sbjct: 131 EAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG- 186
Query: 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
E V GT ++APE V P DV+ G++L ++ G L G E F
Sbjct: 187 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLF 243
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V + D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 70 IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 178
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 179 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 233
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 282
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 283 CPEFMKKLQPTV 294
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 16/174 (9%)
Query: 538 VLPHGEKEFV-TEVNTIGSMHHMNLVRLCGYCSEGS--NRLLVYEFMKNGSLDKWIFPSY 594
+ P G E V E+ + + H N+V+L + + + +V+E + G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 595 HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654
D+ RF +GI Y H Q +IIH DIKP N+L+ E+ K++DFG++
Sbjct: 134 LSEDQ-----ARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 655 KLMGREHSQVVTMVRGTRGYLAPEWVSN--RPITVKA-DVYSYGMLLLEIVGGR 705
+ +++ GT ++APE +S + + KA DV++ G+ L V G+
Sbjct: 185 NEF-KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
GI + H IIH D+KP NI++ + K+ DFGLA+ G V +V TR Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYR 194
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE + D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKE-----FVTEVNTIGSMHHMNLVRL 564
+G G FG V+K G VA+KK VL EKE + E+ + + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 565 CGYCSEGS---NR-----LLVYEFMKN---GSLDKWIFP-SYHHRDRVLDWTTRFNIAIA 612
C + NR LV++F ++ G L + + RV+
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------M 133
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655
G+ Y H RN+I+H D+K N+L+ + K++DFGLA+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 498 RDLQIRTSNF--AQLLGTGGFGSV----YKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVN 551
RDL+++ ++ +++G G FG V +K + + + K + + F E +
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 552 TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
+ + +V+L + +V E+M G L + +Y ++ W + +
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEK---WARFYTAEV 177
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT 671
A + H IH D+KP+N+LLD++ K++DFG M +E GT
Sbjct: 178 VLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 672 RGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGG 704
Y++PE + ++ + D +S G+ L E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V + LG VAVKKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I H + LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----HME--LDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ +V TR Y APE
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E+V G
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 549 EVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFN 608
E + + H ++V L S +V+EFM L I + D ++
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV-------KRADAGFVYS 128
Query: 609 IAIAT------AQGIAYFHEQCRNRIIHCDIKPENILL--DENFCP-KVSDFGLAKLMGR 659
A+A+ + + Y H+ N IIH D+KP +LL EN P K+ FG+A +G
Sbjct: 129 EAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG- 184
Query: 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718
E V GT ++APE V P DV+ G++L ++ G L G E F
Sbjct: 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLF 241
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 498 RDLQIRTSNF--AQLLGTGGFGSV----YKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVN 551
RDL+++ ++ +++G G FG V +K + + + K + + F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 552 TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
+ + +V+L + +V E+M G L + +Y ++ W + +
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEK---WARFYTAEV 182
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT 671
A + H IH D+KP+N+LLD++ K++DFG M +E GT
Sbjct: 183 VLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 672 RGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGG 704
Y++PE + ++ + D +S G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 498 RDLQIRTSNF--AQLLGTGGFGSV----YKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVN 551
RDL+++ ++ +++G G FG V +K + + + K + + F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 552 TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
+ + +V+L + +V E+M G L + +Y ++ W + +
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEK---WARFYTAEV 182
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT 671
A + H IH D+KP+N+LLD++ K++DFG M +E GT
Sbjct: 183 VLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 672 RGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGG 704
Y++PE + ++ + D +S G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIV 702
+ D++S G ++ E+V
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V + D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 70 IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 178
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 233
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 282
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 283 CPEFMKKLQPTV 294
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKE-----FVTEVNTIGSMHHMNLVRL 564
+G G FG V+K G VA+KK VL EKE + E+ + + H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 565 CGYCSEGS---NR-----LLVYEFMKN---GSLDKWIFP-SYHHRDRVLDWTTRFNIAIA 612
C + NR LV++F ++ G L + + RV+
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------M 132
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655
G+ Y H RN+I+H D+K N+L+ + K++DFGLA+
Sbjct: 133 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKE-----FVTEVNTIGSMHHMNLVRL 564
+G G FG V+K G VA+KK VL EKE + E+ + + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 565 CGYCSEGS---NR-----LLVYEFMKN---GSLDKWIFP-SYHHRDRVLDWTTRFNIAIA 612
C + NR LV++F ++ G L + + RV+
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------M 133
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655
G+ Y H RN+I+H D+K N+L+ + K++DFGLA+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 504 TSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSM-H 557
T+ F +L +G+G FGSV+K DG + A+K+ + L E+ + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF---NIAIATA 614
H ++VR +E + L+ E+ GSL I +Y R++ + ++ +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY----RIMSYFKEAELKDLLLQVG 123
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
+G+ Y H ++H DIKP NI + P +
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 504 TSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSM-H 557
T+ F +L +G+G FGSV+K DG + A+K+ + L E+ + EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF---NIAIATA 614
H ++VR +E + L+ E+ GSL I +Y R++ + ++ +
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY----RIMSYFKEAELKDLLLQVG 121
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
+G+ Y H ++H DIKP NI + P +
Sbjct: 122 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 153
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 504 TSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSM-H 557
T+ F +L +G+G FGSV+K DG + A+K+ + L E+ + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF---NIAIATA 614
H ++VR +E + L+ E+ GSL I +Y R++ + ++ +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY----RIMSYFKEAELKDLLLQVG 123
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
+G+ Y H ++H DIKP NI + P +
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 139
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 140 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 194
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 243
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 244 CPEFMKKLQPTV 255
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 511 LGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKE-----FVTEVNTIGSMHHMNLVRL 564
+G G FG V+K G VA+KK VL EKE + E+ + + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 565 CGYCSEGS---NR-----LLVYEFMKN---GSLDKWIFP-SYHHRDRVLDWTTRFNIAIA 612
C + NR LV++F ++ G L + + RV+
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------M 133
Query: 613 TAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655
G+ Y H RN+I+H D+K N+L+ + K++DFGLA+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 504 TSNFAQL--LGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSM-H 557
T+ F +L +G+G FGSV+K DG + A+K+ + L E+ + EV +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 558 HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRF---NIAIATA 614
H ++VR +E + L+ E+ GSL I +Y R++ + ++ +
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY----RIMSYFKEAELKDLLLQVG 125
Query: 615 QGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649
+G+ Y H ++H DIKP NI + P +
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 157
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 244
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 245 CPEFMKKLQPTV 256
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 141
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 196
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 511 LGTGGFGSVYKG-SLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLCGY 567
+G G F V + L G A K ++ ++ ++ E + H N+VRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 568 CSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR 627
SE LV++ + G L + I ++ + + + + + H+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE-----ADASHCIQQILEAVLHCHQM---G 123
Query: 628 IIHCDIKPENILLD---ENFCPKVSDFGLA-KLMGREHSQVVTMVRGTRGYLAPEWVSNR 683
++H D+KPEN+LL + K++DFGLA ++ G + Q GT GYL+PE +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLSPEVLRKE 181
Query: 684 PITVKADVYSYGMLLLEIVGG----------RRNLDMSGDAEDFFYPGW 722
D+++ G++L ++ G + + A DF P W
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEW 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 141
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 196
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 245
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 246 CPEFMKKLQPTV 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 133
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 188
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 237
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 238 CPEFMKKLQPTV 249
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 45/252 (17%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 134
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 189
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN------GTP 732
+ D++S G ++ E+V + +PG + + N GTP
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHK-----------ILFPGRDYIDQWNKVIEQLGTP 238
Query: 733 LKVADRRLEGAV 744
++L+ V
Sbjct: 239 CPEFMKKLQPTV 250
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 511 LGTGGFGSV---YKGSLGDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V Y L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + LV E M + +L + I LD + GI
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 134
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 189
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGGR 705
+ D++S G ++ E+V +
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 33 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 141
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 196
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 616 GIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYL 675
GI + H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYR 192
Query: 676 APEWVSNRPITVKADVYSYGMLLLEIVGG 704
APE + D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G S ++T TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 511 LGTGGFGSVYKGSLGDGTL---VAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRL 564
+G+G G V D L VA+KKL R H ++ + E+ + ++H N++ L
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 565 CGYCS------EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIA 618
+ E + +V E M + +L + I LD + GI
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-------QMELDHERMSYLLYQMLCGIK 140
Query: 619 YFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
+ H IIH D+KP NI++ + K+ DFGLA+ G +V TR Y APE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--TRYYRAPE 195
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ D++S G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 509 QLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGY 567
++ G G FG+V G G VA+KK+ + P + + + +HH N+V+L Y
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 568 ---CSEGSNRLL----VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF 620
E R + V E++ + +L + +Y+ R + I
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPD-TLHRCCR-NYYRRQVAPPPILIKVFLFQLIRSIGCL 145
Query: 621 HEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEW 679
H N + H DIKP N+L++E + K+ DFG AK + V + +R Y APE
Sbjct: 146 HLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRYYRAPEL 202
Query: 680 V-SNRPITVKADVYSYGMLLLEIVGG 704
+ N+ T D++S G + E++ G
Sbjct: 203 IFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 498 RDLQIRTSNF--AQLLGTGGFGSV----YKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVN 551
R LQ++ ++ +++G G FG V +K S + + K + + F E +
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 552 TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAI 611
+ + +V+L + +V E+M G L + +Y ++ W + +
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEK---WAKFYTAEV 183
Query: 612 ATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGT 671
A + H +IH D+KP+N+LLD++ K++DFG M GT
Sbjct: 184 VLA--LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGT 238
Query: 672 RGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGG 704
Y++PE + ++ + D +S G+ L E++ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKA 689
H D+KPENIL+ + + DFG+A E + GT Y APE S T +A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 690 DVYSYGMLLLEIVGG 704
D+Y+ +L E + G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 38/146 (26%)
Query: 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPEN 637
+EF+K + + P H +A + + HE N++ H D+KPEN
Sbjct: 141 FEFLKENNFQPYPLPHVRH------------MAYQLCHALRFLHE---NQLTHTDLKPEN 185
Query: 638 ILL-------------------DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
IL +N +V+DFG A H+ +V TR Y PE
Sbjct: 186 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIV----ATRHYRPPE 241
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ DV+S G +L E G
Sbjct: 242 VILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 38/146 (26%)
Query: 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPEN 637
+EF+K + + P H +A + + HE N++ H D+KPEN
Sbjct: 118 FEFLKENNFQPYPLPHVRH------------MAYQLCHALRFLHE---NQLTHTDLKPEN 162
Query: 638 ILL-------------------DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
IL +N +V+DFG A H+ +V TR Y PE
Sbjct: 163 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIV----ATRHYRPPE 218
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ DV+S G +L E G
Sbjct: 219 VILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 38/146 (26%)
Query: 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPEN 637
+EF+K + + P H +A + + HE N++ H D+KPEN
Sbjct: 109 FEFLKENNFQPYPLPHVRH------------MAYQLCHALRFLHE---NQLTHTDLKPEN 153
Query: 638 ILL-------------------DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678
IL +N +V+DFG A H+ +V TR Y PE
Sbjct: 154 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIV----ATRHYRPPE 209
Query: 679 WVSNRPITVKADVYSYGMLLLEIVGG 704
+ DV+S G +L E G
Sbjct: 210 VILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 26/116 (22%)
Query: 608 NIAIATAQGIAYFHEQCRNRIIHCDIKPENILL---------------DENFCP----KV 648
++A Q + + H+ N++ H D+KPENIL DE +V
Sbjct: 141 HMAFQLCQAVKFLHD---NKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 649 SDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG 704
DFG A HS +V+ TR Y APE + + DV+S G ++ E G
Sbjct: 198 VDFGSATFDHEHHSTIVS----TRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 623 QCRN-RIIHCDIKPENILLDENFCP-KVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWV 680
C N ++H DIK ENIL+D N K+ DFG L+ V T GTR Y PEW+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWI 228
Query: 681 S-NRPITVKADVYSYGMLLLEIVGG 704
+R A V+S G+LL ++V G
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,410,798
Number of Sequences: 62578
Number of extensions: 1152557
Number of successful extensions: 5190
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 2848
Number of HSP's gapped (non-prelim): 1209
length of query: 839
length of database: 14,973,337
effective HSP length: 107
effective length of query: 732
effective length of database: 8,277,491
effective search space: 6059123412
effective search space used: 6059123412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)