Query 038743
Match_columns 839
No_of_seqs 510 out of 3710
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 02:50:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038743.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038743hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4.7E-55 1E-59 473.2 25.8 287 491-781 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 1.3E-45 2.8E-50 396.1 17.8 255 506-782 44-305 (362)
3 KOG0197 Tyrosine kinases [Sign 100.0 3.4E-45 7.4E-50 389.7 14.9 262 498-782 201-463 (468)
4 KOG0581 Mitogen-activated prot 100.0 3.1E-43 6.6E-48 357.9 17.0 256 495-776 76-335 (364)
5 KOG1026 Nerve growth factor re 100.0 4.6E-44 1E-48 398.9 11.4 268 496-782 479-764 (774)
6 KOG0595 Serine/threonine-prote 100.0 7.5E-43 1.6E-47 357.5 12.3 199 504-712 11-218 (429)
7 KOG0615 Serine/threonine prote 100.0 2.5E-42 5.4E-47 352.7 14.3 254 501-776 170-437 (475)
8 KOG0575 Polo-like serine/threo 100.0 3.5E-42 7.6E-47 369.7 15.5 248 503-776 18-269 (592)
9 KOG0196 Tyrosine kinase, EPH ( 100.0 7.4E-43 1.6E-47 380.3 10.3 254 504-780 630-891 (996)
10 KOG0591 NIMA (never in mitosis 100.0 2.3E-42 5.1E-47 335.7 5.8 261 501-779 17-284 (375)
11 KOG1094 Discoidin domain recep 100.0 4.7E-40 1E-44 347.6 15.6 268 498-780 533-804 (807)
12 KOG3653 Transforming growth fa 100.0 8E-40 1.7E-44 339.8 15.6 267 505-782 212-505 (534)
13 KOG0193 Serine/threonine prote 100.0 7.3E-40 1.6E-44 349.6 14.3 265 496-782 385-655 (678)
14 KOG4721 Serine/threonine prote 100.0 1.4E-39 3E-44 342.3 11.8 239 508-779 129-367 (904)
15 KOG0194 Protein tyrosine kinas 100.0 5E-40 1.1E-44 356.5 8.2 269 492-783 146-423 (474)
16 KOG0198 MEKK and related serin 100.0 2.4E-39 5.2E-44 336.6 13.0 255 505-780 19-280 (313)
17 KOG0593 Predicted protein kina 100.0 2.1E-39 4.5E-44 318.3 11.7 261 506-775 5-283 (396)
18 KOG0598 Ribosomal protein S6 k 100.0 2.2E-39 4.7E-44 329.8 12.2 242 502-768 24-269 (357)
19 KOG1095 Protein tyrosine kinas 100.0 1.3E-39 2.8E-44 376.6 11.7 264 500-782 689-963 (1025)
20 KOG0600 Cdc2-related protein k 100.0 6.7E-39 1.4E-43 335.7 15.5 263 505-776 119-400 (560)
21 KOG0659 Cdk activating kinase 100.0 2E-38 4.3E-43 306.7 15.3 262 505-776 4-281 (318)
22 KOG0578 p21-activated serine/t 100.0 2.2E-38 4.8E-43 337.8 15.5 245 508-776 278-523 (550)
23 KOG0582 Ste20-like serine/thre 100.0 5.6E-38 1.2E-42 323.9 17.5 262 502-776 25-293 (516)
24 PLN00113 leucine-rich repeat r 100.0 3.2E-37 7E-42 384.2 26.6 268 495-782 683-953 (968)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-38 4.4E-43 347.5 13.8 261 502-780 6-334 (338)
26 KOG0592 3-phosphoinositide-dep 100.0 1.3E-38 2.8E-43 336.2 11.1 248 504-776 74-338 (604)
27 PHA02988 hypothetical protein; 100.0 7.2E-38 1.6E-42 333.7 16.4 245 509-780 26-279 (283)
28 KOG4278 Protein tyrosine kinas 100.0 1.6E-38 3.4E-43 336.7 10.3 266 492-780 256-523 (1157)
29 KOG0661 MAPK related serine/th 100.0 1.2E-38 2.6E-43 331.3 8.5 264 503-776 10-291 (538)
30 cd05104 PTKc_Kit Catalytic dom 100.0 1.9E-37 4.2E-42 343.6 15.8 261 502-780 34-374 (375)
31 cd05064 PTKc_EphR_A10 Catalyti 100.0 2E-37 4.3E-42 327.6 14.7 257 501-780 3-265 (266)
32 KOG0597 Serine-threonine prote 100.0 9.6E-38 2.1E-42 329.0 11.5 245 505-776 4-251 (808)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-36 3E-41 327.9 19.2 266 502-779 4-304 (304)
34 cd05106 PTKc_CSF-1R Catalytic 100.0 4.4E-37 9.6E-42 340.4 15.2 263 500-780 35-372 (374)
35 KOG0583 Serine/threonine prote 100.0 7.4E-37 1.6E-41 331.9 15.8 249 501-775 15-274 (370)
36 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-36 2.8E-41 320.4 16.8 257 500-779 3-260 (261)
37 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-36 2.8E-41 320.4 16.3 255 502-779 5-260 (261)
38 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.6E-36 3.6E-41 318.7 17.0 251 504-778 5-256 (256)
39 PF07714 Pkinase_Tyr: Protein 100.0 1.6E-37 3.5E-42 326.8 9.2 249 507-777 3-259 (259)
40 KOG2052 Activin A type IB rece 100.0 1.2E-36 2.5E-41 313.9 14.7 275 495-782 203-505 (513)
41 KOG0201 Serine/threonine prote 100.0 2.7E-37 5.9E-42 319.0 9.7 244 508-776 18-263 (467)
42 KOG0616 cAMP-dependent protein 100.0 8.6E-37 1.9E-41 299.6 12.6 196 505-712 46-245 (355)
43 KOG0588 Serine/threonine prote 100.0 8.1E-37 1.8E-41 328.8 13.5 245 505-776 14-263 (786)
44 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-36 2.4E-41 316.0 13.5 254 503-780 97-376 (576)
45 cd05631 STKc_GRK4 Catalytic do 100.0 2.7E-36 5.8E-41 322.3 16.0 250 505-775 2-260 (285)
46 cd05052 PTKc_Abl Catalytic dom 100.0 3E-36 6.5E-41 318.1 16.2 256 502-780 5-262 (263)
47 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.5E-36 7.7E-41 317.1 16.2 254 503-779 6-260 (261)
48 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.2E-36 6.9E-41 316.5 15.7 252 503-778 4-256 (256)
49 KOG1989 ARK protein kinase fam 100.0 1.5E-36 3.3E-41 340.8 14.1 257 505-784 39-315 (738)
50 cd05048 PTKc_Ror Catalytic Dom 100.0 3.1E-36 6.8E-41 321.6 15.8 258 503-779 5-282 (283)
51 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-36 4E-41 331.1 13.5 251 505-776 3-257 (333)
52 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.9E-36 6.2E-41 335.2 15.1 261 502-780 36-397 (400)
53 cd05049 PTKc_Trk Catalytic dom 100.0 5.7E-36 1.2E-40 319.0 16.3 259 501-778 3-279 (280)
54 cd05059 PTKc_Tec_like Catalyti 100.0 5.1E-36 1.1E-40 315.0 14.9 251 504-778 5-256 (256)
55 KOG0605 NDR and related serine 100.0 2.9E-36 6.3E-41 319.0 13.0 243 505-769 143-435 (550)
56 KOG2345 Serine/threonine prote 100.0 2.7E-36 5.8E-41 289.0 11.4 263 503-780 21-300 (302)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 6.3E-36 1.4E-40 326.5 16.0 199 502-710 4-204 (331)
58 cd05571 STKc_PKB Catalytic dom 100.0 4.4E-36 9.4E-41 326.5 14.6 242 509-776 1-251 (323)
59 cd05585 STKc_YPK1_like Catalyt 100.0 7.6E-36 1.6E-40 323.1 16.0 241 511-777 1-245 (312)
60 cd07848 STKc_CDKL5 Catalytic d 100.0 5.1E-36 1.1E-40 320.7 14.5 263 505-775 3-283 (287)
61 KOG0694 Serine/threonine prote 100.0 5.4E-36 1.2E-40 325.5 14.6 244 500-770 365-613 (694)
62 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.4E-35 3E-40 312.5 17.1 254 502-779 5-259 (260)
63 cd05071 PTKc_Src Catalytic dom 100.0 1.4E-35 2.9E-40 312.8 17.0 254 503-780 6-260 (262)
64 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.6E-35 3.4E-40 312.0 17.5 256 500-779 3-259 (260)
65 PTZ00263 protein kinase A cata 100.0 1.1E-35 2.4E-40 324.1 16.6 245 503-776 18-271 (329)
66 KOG1025 Epidermal growth facto 100.0 2.8E-36 6E-41 329.9 11.7 250 507-780 700-957 (1177)
67 KOG4257 Focal adhesion tyrosin 100.0 3.4E-36 7.3E-41 320.0 12.0 257 500-780 386-649 (974)
68 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-35 2.4E-40 317.4 16.1 260 501-779 3-282 (283)
69 cd05054 PTKc_VEGFR Catalytic d 100.0 6E-36 1.3E-40 326.9 14.2 262 502-781 6-334 (337)
70 cd05108 PTKc_EGFR Catalytic do 100.0 8.1E-36 1.8E-40 323.6 14.9 257 501-781 5-269 (316)
71 KOG0580 Serine/threonine prote 100.0 2.8E-36 6E-41 287.8 9.8 248 503-776 22-273 (281)
72 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-35 3.2E-40 313.4 16.5 255 503-780 4-265 (266)
73 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-35 2.4E-40 318.7 15.2 262 502-782 4-284 (291)
74 cd06650 PKc_MEK1 Catalytic dom 100.0 1.7E-35 3.6E-40 323.1 16.5 202 500-711 2-205 (333)
75 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-35 3E-40 323.0 15.8 242 509-776 1-251 (328)
76 cd05612 STKc_PRKX_like Catalyt 100.0 8.2E-36 1.8E-40 319.5 13.8 243 505-776 3-254 (291)
77 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.7E-35 3.8E-40 316.0 16.1 270 504-780 5-283 (284)
78 KOG0611 Predicted serine/threo 100.0 3.8E-36 8.1E-41 304.9 10.2 249 501-777 51-304 (668)
79 cd05085 PTKc_Fer Catalytic dom 100.0 2.4E-35 5.2E-40 308.6 16.4 247 509-778 1-249 (250)
80 PTZ00426 cAMP-dependent protei 100.0 1.7E-35 3.6E-40 323.4 15.7 248 500-776 27-284 (340)
81 cd05093 PTKc_TrkB Catalytic do 100.0 1.5E-35 3.3E-40 317.1 15.0 261 502-781 4-280 (288)
82 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-35 2.9E-40 329.5 14.9 265 498-780 32-399 (401)
83 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.5E-35 5.3E-40 314.7 16.4 265 506-780 7-281 (283)
84 cd05116 PTKc_Syk Catalytic dom 100.0 2.9E-35 6.2E-40 309.5 16.5 245 510-779 2-254 (257)
85 cd05084 PTKc_Fes Catalytic dom 100.0 2.4E-35 5.2E-40 309.1 15.8 247 509-778 1-251 (252)
86 cd05069 PTKc_Yes Catalytic dom 100.0 3.4E-35 7.4E-40 309.4 17.1 253 503-779 6-259 (260)
87 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-35 2.8E-40 322.7 14.2 241 509-775 1-250 (323)
88 PTZ00267 NIMA-related protein 100.0 1.4E-35 3.1E-40 338.6 15.1 251 505-775 69-322 (478)
89 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-35 4.2E-40 314.5 14.9 260 501-779 4-277 (277)
90 cd05618 STKc_aPKC_iota Catalyt 100.0 5.4E-35 1.2E-39 318.5 18.5 243 509-770 1-250 (329)
91 PLN00034 mitogen-activated pro 100.0 3.8E-35 8.3E-40 323.3 17.4 245 506-776 77-328 (353)
92 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-35 4.6E-40 326.7 15.4 254 501-776 41-304 (370)
93 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-35 6E-40 313.5 15.7 255 504-782 8-270 (279)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-35 3.7E-40 316.6 13.7 263 504-775 6-284 (288)
95 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-35 3.7E-40 326.1 14.2 251 504-776 2-285 (350)
96 cd07862 STKc_CDK6 Catalytic do 100.0 3.2E-35 6.8E-40 315.0 15.7 263 504-775 2-286 (290)
97 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-35 5.9E-40 314.3 15.1 259 502-779 4-282 (283)
98 cd05614 STKc_MSK2_N N-terminal 100.0 3.9E-35 8.5E-40 320.6 16.7 251 505-776 2-267 (332)
99 PHA03212 serine/threonine kina 100.0 3.5E-35 7.7E-40 326.2 16.4 192 504-710 93-285 (391)
100 cd05588 STKc_aPKC Catalytic do 100.0 6.5E-35 1.4E-39 318.0 18.1 248 509-775 1-261 (329)
101 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-35 6.6E-40 319.9 15.4 241 509-775 2-255 (323)
102 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-35 3.9E-40 322.1 13.5 243 509-776 1-252 (325)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 3.8E-35 8.3E-40 324.2 16.1 253 502-776 42-304 (370)
104 cd05053 PTKc_FGFR Catalytic do 100.0 5.3E-35 1.1E-39 313.8 16.5 260 502-780 11-291 (293)
105 cd05035 PTKc_Axl_like Catalyti 100.0 7E-35 1.5E-39 309.3 17.2 256 506-780 2-272 (273)
106 KOG0663 Protein kinase PITSLRE 100.0 3.2E-35 6.8E-40 292.8 13.0 262 506-776 79-361 (419)
107 KOG0589 Serine/threonine prote 100.0 1.6E-35 3.5E-40 315.1 11.7 251 503-776 4-258 (426)
108 cd05073 PTKc_Hck Catalytic dom 100.0 7.2E-35 1.6E-39 307.0 16.5 256 500-779 3-259 (260)
109 cd05092 PTKc_TrkA Catalytic do 100.0 5.5E-35 1.2E-39 311.4 15.7 258 503-779 5-280 (280)
110 cd05034 PTKc_Src_like Catalyti 100.0 5.9E-35 1.3E-39 307.7 15.7 256 501-779 4-260 (261)
111 cd05115 PTKc_Zap-70 Catalytic 100.0 7.7E-35 1.7E-39 306.1 16.5 247 510-780 2-255 (257)
112 cd05626 STKc_LATS2 Catalytic d 100.0 6.3E-35 1.4E-39 324.8 16.4 251 505-776 3-305 (381)
113 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.5E-35 1.4E-39 308.8 15.7 254 504-780 6-267 (268)
114 cd05045 PTKc_RET Catalytic dom 100.0 4.7E-35 1E-39 313.7 14.7 258 505-781 2-287 (290)
115 cd05592 STKc_nPKC_theta_delta 100.0 6E-35 1.3E-39 316.4 15.7 240 509-774 1-246 (316)
116 cd05603 STKc_SGK2 Catalytic do 100.0 7.1E-35 1.5E-39 316.9 16.2 237 509-771 1-242 (321)
117 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.5E-34 5.5E-39 304.4 19.8 255 509-778 1-268 (269)
118 cd05075 PTKc_Axl Catalytic dom 100.0 7.4E-35 1.6E-39 309.0 15.7 255 507-780 3-271 (272)
119 cd05065 PTKc_EphR_B Catalytic 100.0 8.3E-35 1.8E-39 308.2 15.9 255 503-780 4-268 (269)
120 KOG0658 Glycogen synthase kina 100.0 1.1E-35 2.4E-40 302.0 8.6 258 508-776 29-306 (364)
121 cd05591 STKc_nPKC_epsilon Cata 100.0 9.4E-35 2E-39 315.9 16.6 242 509-776 1-254 (321)
122 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-34 3.1E-39 310.9 17.8 264 503-778 5-295 (296)
123 cd05066 PTKc_EphR_A Catalytic 100.0 1E-34 2.3E-39 307.1 16.3 255 503-780 4-266 (267)
124 cd05097 PTKc_DDR_like Catalyti 100.0 1E-34 2.2E-39 311.8 16.4 265 502-778 4-294 (295)
125 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-34 3.3E-39 314.9 17.8 243 509-770 1-248 (327)
126 cd05601 STKc_CRIK Catalytic do 100.0 3.4E-35 7.3E-40 320.8 12.6 251 505-776 3-263 (330)
127 cd05582 STKc_RSK_N N-terminal 100.0 2.5E-35 5.4E-40 320.0 11.4 238 509-772 2-245 (318)
128 PTZ00283 serine/threonine prot 100.0 5.3E-35 1.1E-39 333.9 14.6 254 503-776 32-297 (496)
129 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-35 5.9E-40 322.9 11.7 263 505-776 2-290 (338)
130 cd05089 PTKc_Tie1 Catalytic do 100.0 7.5E-35 1.6E-39 313.2 14.8 262 504-786 3-281 (297)
131 KOG4279 Serine/threonine prote 100.0 5E-35 1.1E-39 313.9 13.2 258 510-789 582-847 (1226)
132 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.6E-35 1.6E-39 314.3 14.9 265 500-783 12-299 (304)
133 cd05608 STKc_GRK1 Catalytic do 100.0 8.8E-35 1.9E-39 309.8 15.1 247 511-775 1-256 (280)
134 cd05112 PTKc_Itk Catalytic dom 100.0 1.2E-34 2.7E-39 304.4 15.8 251 504-778 5-256 (256)
135 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-34 3.4E-39 308.7 16.8 251 505-776 2-261 (285)
136 cd05032 PTKc_InsR_like Catalyt 100.0 9.7E-35 2.1E-39 309.0 15.0 260 501-779 4-277 (277)
137 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-34 2.4E-39 314.9 15.6 236 509-770 1-241 (320)
138 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-34 3.6E-39 319.4 17.2 199 505-711 3-239 (363)
139 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.3E-35 1.8E-39 319.2 14.6 262 502-781 6-340 (343)
140 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-34 2.7E-39 313.9 15.8 241 509-775 1-247 (316)
141 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-34 3.8E-39 304.3 16.6 240 509-778 1-262 (262)
142 cd05039 PTKc_Csk_like Catalyti 100.0 1.3E-34 2.7E-39 304.4 15.4 249 503-779 6-255 (256)
143 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-34 2.4E-39 308.7 15.0 257 503-778 6-276 (277)
144 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-34 2.3E-39 315.9 15.2 243 506-775 2-256 (324)
145 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-34 3.7E-39 308.3 16.5 262 503-780 4-283 (284)
146 cd05055 PTKc_PDGFR Catalytic d 100.0 1.2E-34 2.6E-39 312.2 15.5 257 502-779 34-300 (302)
147 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-34 3.3E-39 307.9 15.8 258 502-783 6-271 (279)
148 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-34 5.2E-39 302.1 17.1 249 505-776 2-253 (256)
149 cd06646 STKc_MAP4K5 Catalytic 100.0 2.2E-34 4.7E-39 304.6 16.8 255 502-777 8-266 (267)
150 cd05043 PTK_Ryk Pseudokinase d 100.0 1.6E-34 3.4E-39 307.9 15.6 260 502-780 5-276 (280)
151 cd08228 STKc_Nek6 Catalytic do 100.0 2E-34 4.3E-39 304.9 16.2 259 504-780 3-265 (267)
152 cd05088 PTKc_Tie2 Catalytic do 100.0 1.6E-34 3.4E-39 311.5 15.7 258 502-780 6-280 (303)
153 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-34 4.7E-39 313.3 16.9 237 509-771 1-242 (323)
154 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-34 5.3E-39 309.1 17.0 265 503-779 5-296 (296)
155 cd05060 PTKc_Syk_like Catalyti 100.0 2.2E-34 4.7E-39 302.8 16.3 248 509-781 1-256 (257)
156 cd05047 PTKc_Tie Catalytic dom 100.0 2.4E-34 5.2E-39 304.8 16.4 251 509-780 1-268 (270)
157 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.2E-34 4.8E-39 307.4 16.2 269 503-780 4-283 (284)
158 cd05607 STKc_GRK7 Catalytic do 100.0 2.3E-34 5E-39 306.0 16.2 248 511-778 1-252 (277)
159 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-34 2.7E-39 313.0 14.4 263 500-781 15-300 (307)
160 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-34 8.8E-39 308.4 18.2 263 504-775 6-287 (303)
161 cd08229 STKc_Nek7 Catalytic do 100.0 3.3E-34 7.1E-39 303.2 17.1 259 504-780 3-265 (267)
162 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-34 3E-39 321.2 14.9 261 506-776 3-288 (372)
163 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-34 3.2E-39 307.0 14.4 239 510-778 2-274 (274)
164 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-34 2.5E-39 321.2 14.2 250 505-776 3-296 (364)
165 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-34 5.5E-39 304.4 16.2 255 509-778 1-268 (269)
166 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.8E-34 1.3E-38 301.2 18.7 258 504-780 3-265 (267)
167 KOG0594 Protein kinase PCTAIRE 100.0 4.2E-34 9.1E-39 291.5 16.7 266 505-776 13-302 (323)
168 cd05041 PTKc_Fes_like Catalyti 100.0 3.3E-34 7.2E-39 300.2 16.5 248 509-779 1-251 (251)
169 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-34 3.5E-39 313.4 14.7 242 509-776 1-252 (318)
170 cd05082 PTKc_Csk Catalytic dom 100.0 3.7E-34 8.1E-39 300.8 16.8 248 503-779 6-255 (256)
171 cd06654 STKc_PAK1 Catalytic do 100.0 3E-34 6.4E-39 308.3 16.3 249 504-776 21-270 (296)
172 KOG0660 Mitogen-activated prot 100.0 3.3E-35 7.2E-40 298.0 8.2 260 508-776 27-310 (359)
173 cd05622 STKc_ROCK1 Catalytic d 100.0 2.7E-34 5.8E-39 317.9 16.2 256 500-777 40-305 (371)
174 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-34 4E-39 314.0 14.7 240 505-770 2-246 (324)
175 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-34 4.4E-39 313.5 15.0 240 505-770 2-246 (323)
176 cd06625 STKc_MEKK3_like Cataly 100.0 2.9E-34 6.2E-39 302.9 15.6 249 505-776 4-260 (263)
177 cd05100 PTKc_FGFR3 Catalytic d 100.0 3E-34 6.6E-39 313.8 16.3 266 499-783 8-296 (334)
178 cd05040 PTKc_Ack_like Catalyti 100.0 3.7E-34 8E-39 301.0 16.3 248 509-778 1-256 (257)
179 cd05620 STKc_nPKC_delta Cataly 100.0 1.9E-34 4.1E-39 312.5 14.5 240 509-774 1-246 (316)
180 cd05056 PTKc_FAK Catalytic dom 100.0 2.2E-34 4.7E-39 305.1 14.6 255 502-780 5-265 (270)
181 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-34 4.6E-39 320.9 15.2 199 505-711 3-251 (382)
182 cd05598 STKc_LATS Catalytic do 100.0 1.3E-34 2.9E-39 322.0 13.2 200 505-712 3-248 (376)
183 cd06619 PKc_MKK5 Catalytic dom 100.0 6.1E-34 1.3E-38 303.2 17.7 250 505-777 3-254 (279)
184 KOG0033 Ca2+/calmodulin-depend 100.0 7.9E-36 1.7E-40 284.4 2.7 251 503-776 11-267 (355)
185 cd05050 PTKc_Musk Catalytic do 100.0 2.7E-34 5.9E-39 307.4 14.9 258 503-779 5-288 (288)
186 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-34 3.3E-39 314.8 13.0 242 509-776 1-247 (325)
187 cd05629 STKc_NDR_like_fungal C 100.0 2.4E-34 5.3E-39 319.9 14.8 199 505-711 3-251 (377)
188 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-34 7.9E-39 305.8 15.6 259 500-777 2-267 (284)
189 cd05061 PTKc_InsR Catalytic do 100.0 2.9E-34 6.2E-39 307.2 14.8 261 502-781 5-279 (288)
190 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.8E-34 1E-38 309.5 16.3 260 502-780 11-293 (314)
191 cd05624 STKc_MRCK_beta Catalyt 100.0 4.3E-34 9.3E-39 311.9 16.0 200 505-711 3-211 (331)
192 KOG0032 Ca2+/calmodulin-depend 100.0 8.8E-34 1.9E-38 307.4 18.1 251 502-776 34-293 (382)
193 KOG0199 ACK and related non-re 100.0 7.8E-35 1.7E-39 313.4 9.5 249 505-776 112-368 (1039)
194 cd00192 PTKc Catalytic domain 100.0 8.4E-34 1.8E-38 298.7 17.1 251 509-778 1-262 (262)
195 cd06624 STKc_ASK Catalytic dom 100.0 6.8E-34 1.5E-38 301.0 16.4 246 508-775 13-264 (268)
196 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-33 2.4E-38 305.6 18.3 263 505-777 3-288 (308)
197 cd05602 STKc_SGK1 Catalytic do 100.0 3E-34 6.5E-39 312.5 13.8 244 509-778 1-249 (325)
198 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.7E-34 1.7E-38 302.1 16.5 247 504-776 5-253 (277)
199 cd06637 STKc_TNIK Catalytic do 100.0 6.9E-34 1.5E-38 301.6 16.1 249 504-775 7-268 (272)
200 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.7E-34 2.1E-38 298.0 17.0 238 509-778 1-259 (259)
201 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-33 2.7E-38 299.0 17.9 254 509-778 1-267 (268)
202 PHA03211 serine/threonine kina 100.0 1.2E-33 2.6E-38 317.6 18.6 191 504-708 170-362 (461)
203 cd05058 PTKc_Met_Ron Catalytic 100.0 6.1E-34 1.3E-38 300.2 15.3 249 509-780 1-259 (262)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 4E-34 8.7E-39 311.0 14.3 240 505-770 2-246 (323)
205 cd05597 STKc_DMPK_like Catalyt 100.0 7.7E-34 1.7E-38 309.9 16.4 200 504-710 2-210 (331)
206 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-33 2.7E-38 303.5 17.4 249 503-775 19-268 (297)
207 cd05046 PTK_CCK4 Pseudokinase 100.0 7.7E-34 1.7E-38 301.8 15.5 257 504-778 6-274 (275)
208 cd08528 STKc_Nek10 Catalytic d 100.0 8.6E-34 1.9E-38 300.4 15.6 255 505-779 2-269 (269)
209 cd05044 PTKc_c-ros Catalytic d 100.0 6.1E-34 1.3E-38 301.5 14.4 252 509-779 1-269 (269)
210 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.6E-34 1E-38 308.9 13.6 263 504-775 7-285 (309)
211 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.3E-34 7.2E-39 301.6 12.1 240 509-778 1-258 (258)
212 cd05630 STKc_GRK6 Catalytic do 100.0 7E-34 1.5E-38 303.6 14.7 250 505-775 2-260 (285)
213 PRK13184 pknD serine/threonine 100.0 7.1E-34 1.5E-38 332.0 16.0 260 504-780 3-290 (932)
214 cd05083 PTKc_Chk Catalytic dom 100.0 1E-33 2.3E-38 297.0 15.8 247 503-779 6-253 (254)
215 cd06612 STKc_MST1_2 Catalytic 100.0 1.4E-33 3.1E-38 296.2 16.5 248 504-775 4-252 (256)
216 cd07868 STKc_CDK8 Catalytic do 100.0 1.9E-33 4.2E-38 305.3 18.0 199 508-712 6-220 (317)
217 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-33 2.6E-38 301.9 15.6 246 505-771 2-251 (285)
218 KOG0577 Serine/threonine prote 100.0 5.6E-34 1.2E-38 301.4 12.7 240 509-776 32-278 (948)
219 cd06655 STKc_PAK2 Catalytic do 100.0 1E-33 2.2E-38 304.1 14.9 248 505-776 21-269 (296)
220 PTZ00036 glycogen synthase kin 100.0 4.8E-34 1E-38 322.3 12.9 262 504-776 67-351 (440)
221 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-33 3E-38 308.2 15.9 201 504-711 2-211 (332)
222 cd06643 STKc_SLK Catalytic dom 100.0 2E-33 4.2E-38 299.8 16.6 251 505-777 7-263 (282)
223 cd06640 STKc_MST4 Catalytic do 100.0 3.5E-33 7.5E-38 297.1 18.3 246 505-776 6-253 (277)
224 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-33 4.1E-38 295.2 16.0 249 505-776 2-252 (255)
225 PF00069 Pkinase: Protein kina 100.0 3.7E-34 7.9E-39 301.4 10.5 252 505-775 1-256 (260)
226 cd06609 STKc_MST3_like Catalyt 100.0 2.2E-33 4.8E-38 298.1 16.4 247 505-776 3-251 (274)
227 cd06628 STKc_MAPKKK_Byr2_like 100.0 2E-33 4.3E-38 297.2 15.9 247 505-775 2-263 (267)
228 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-33 5.5E-38 299.9 16.9 262 505-775 2-284 (288)
229 cd06645 STKc_MAP4K3 Catalytic 100.0 2.5E-33 5.4E-38 296.5 16.6 251 504-775 10-264 (267)
230 cd05057 PTKc_EGFR_like Catalyt 100.0 1.5E-33 3.3E-38 300.2 15.0 256 502-781 6-269 (279)
231 KOG0599 Phosphorylase kinase g 100.0 2E-34 4.4E-39 278.7 7.3 250 504-776 18-283 (411)
232 PHA03207 serine/threonine kina 100.0 2E-33 4.4E-38 313.6 16.5 261 502-776 91-375 (392)
233 cd06632 STKc_MEKK1_plant Catal 100.0 2.2E-33 4.9E-38 295.0 15.9 246 505-775 2-254 (258)
234 PHA03209 serine/threonine kina 100.0 2.4E-33 5.3E-38 309.0 16.6 190 503-708 66-256 (357)
235 cd07867 STKc_CDC2L6 Catalytic 100.0 3.4E-33 7.4E-38 303.4 17.5 198 509-712 7-220 (317)
236 cd06631 STKc_YSK4 Catalytic do 100.0 2E-33 4.4E-38 296.8 15.1 249 505-775 2-261 (265)
237 cd06644 STKc_STK10_LOK Catalyt 100.0 4.2E-33 9.2E-38 298.9 17.7 250 504-775 13-268 (292)
238 cd08221 STKc_Nek9 Catalytic do 100.0 3.6E-33 7.9E-38 293.2 16.5 250 505-777 2-254 (256)
239 cd05586 STKc_Sck1_like Catalyt 100.0 9.9E-34 2.1E-38 309.2 12.6 240 511-775 1-252 (330)
240 cd05110 PTKc_HER4 Catalytic do 100.0 1.5E-33 3.2E-38 304.0 13.8 253 504-780 8-268 (303)
241 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.2E-33 9.1E-38 297.9 17.2 253 504-776 2-262 (286)
242 cd06651 STKc_MEKK3 Catalytic d 100.0 3.8E-33 8.3E-38 294.9 16.3 247 505-775 4-260 (266)
243 cd05627 STKc_NDR2 Catalytic do 100.0 8.8E-34 1.9E-38 313.3 11.7 199 505-711 3-239 (360)
244 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.5E-33 3.2E-38 301.4 13.0 263 504-775 2-282 (286)
245 smart00219 TyrKc Tyrosine kina 100.0 4E-33 8.6E-38 293.0 15.9 249 507-777 3-258 (258)
246 cd08227 PK_STRAD_alpha Pseudok 100.0 4.6E-33 9.9E-38 303.5 16.7 199 507-711 2-213 (327)
247 cd06658 STKc_PAK5 Catalytic do 100.0 3E-33 6.6E-38 299.7 15.0 244 509-776 28-272 (292)
248 cd06613 STKc_MAP4K3_like Catal 100.0 5E-33 1.1E-37 293.1 16.3 252 504-775 4-259 (262)
249 cd06659 STKc_PAK6 Catalytic do 100.0 3.4E-33 7.4E-38 300.1 15.3 245 508-776 26-271 (297)
250 KOG0574 STE20-like serine/thre 100.0 1.3E-34 2.8E-39 283.3 3.8 247 505-776 35-283 (502)
251 cd08218 STKc_Nek1 Catalytic do 100.0 5E-33 1.1E-37 292.1 16.0 249 505-776 2-253 (256)
252 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.5E-33 5.5E-38 302.0 14.1 264 503-775 6-285 (301)
253 cd07833 STKc_CDKL Catalytic do 100.0 2.7E-33 5.8E-38 299.7 14.0 264 504-775 2-284 (288)
254 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.7E-33 1E-37 297.5 15.7 262 505-775 3-282 (286)
255 cd06611 STKc_SLK_like Catalyti 100.0 4.3E-33 9.2E-38 296.9 15.2 251 504-776 6-262 (280)
256 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-32 2.9E-37 295.9 19.2 263 505-776 2-282 (298)
257 cd07876 STKc_JNK2 Catalytic do 100.0 7.3E-33 1.6E-37 306.0 17.5 261 503-776 21-315 (359)
258 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-32 2.4E-37 295.6 18.3 250 503-776 19-269 (293)
259 cd07861 STKc_CDK1_euk Catalyti 100.0 3.4E-33 7.4E-38 298.4 14.4 264 505-775 2-281 (285)
260 cd06626 STKc_MEKK4 Catalytic d 100.0 8.1E-33 1.7E-37 291.9 17.0 250 505-775 2-260 (264)
261 KOG4717 Serine/threonine prote 100.0 3E-33 6.5E-38 291.4 13.2 247 504-776 19-270 (864)
262 cd07875 STKc_JNK1 Catalytic do 100.0 6.3E-33 1.4E-37 307.1 16.7 260 503-776 24-318 (364)
263 cd08223 STKc_Nek4 Catalytic do 100.0 7.9E-33 1.7E-37 290.8 16.6 249 505-776 2-254 (257)
264 PTZ00266 NIMA-related protein 100.0 2.8E-33 6.1E-38 328.2 14.4 261 496-775 6-294 (1021)
265 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.5E-33 1.2E-37 294.8 15.3 256 506-780 2-272 (273)
266 KOG0610 Putative serine/threon 100.0 7.3E-33 1.6E-37 284.1 15.5 251 504-775 78-391 (459)
267 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.6E-33 1.4E-37 294.1 15.9 252 506-776 4-269 (272)
268 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-32 2.5E-37 294.6 17.2 255 503-777 18-284 (286)
269 cd07874 STKc_JNK3 Catalytic do 100.0 2.7E-33 5.7E-38 309.1 12.3 261 503-776 17-311 (355)
270 cd07832 STKc_CCRK Catalytic do 100.0 6.5E-33 1.4E-37 296.4 14.8 264 505-776 2-282 (286)
271 cd06652 STKc_MEKK2 Catalytic d 100.0 1E-32 2.2E-37 291.4 15.9 247 505-775 4-260 (265)
272 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-32 3.1E-37 292.4 16.7 247 504-776 5-253 (277)
273 KOG0667 Dual-specificity tyros 100.0 7.1E-33 1.5E-37 301.8 14.6 197 504-712 187-392 (586)
274 cd06917 STKc_NAK1_like Catalyt 100.0 1.9E-32 4.1E-37 291.4 17.5 247 505-776 3-255 (277)
275 cd05574 STKc_phototropin_like 100.0 1E-32 2.2E-37 299.4 15.7 250 505-775 3-288 (316)
276 cd06605 PKc_MAPKK Catalytic do 100.0 8.6E-33 1.9E-37 291.9 14.7 252 505-776 3-257 (265)
277 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.7E-33 1.2E-37 304.9 13.9 257 504-776 16-298 (343)
278 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-32 3.6E-37 290.3 16.9 251 505-775 2-263 (268)
279 KOG0200 Fibroblast/platelet-de 100.0 8.8E-33 1.9E-37 321.2 15.8 263 499-779 292-578 (609)
280 cd06623 PKc_MAPKK_plant_like C 100.0 1.5E-32 3.3E-37 289.7 16.2 250 505-776 3-256 (264)
281 KOG0584 Serine/threonine prote 100.0 8.2E-34 1.8E-38 305.7 6.5 245 507-776 44-296 (632)
282 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.2E-32 9.2E-37 290.3 19.4 260 505-776 3-266 (287)
283 cd08220 STKc_Nek8 Catalytic do 100.0 2.2E-32 4.7E-37 287.2 16.8 247 505-775 2-252 (256)
284 PTZ00284 protein kinase; Provi 100.0 5.3E-33 1.2E-37 317.4 12.9 260 503-775 129-437 (467)
285 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-32 2.6E-37 290.5 14.5 254 505-776 2-262 (265)
286 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-32 6.3E-37 288.1 17.4 255 504-775 2-263 (267)
287 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-32 3.8E-37 292.5 15.8 250 503-775 16-278 (282)
288 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-32 3.5E-37 293.1 15.2 262 505-775 2-280 (284)
289 cd06607 STKc_TAO Catalytic dom 100.0 3.1E-32 6.8E-37 294.3 16.9 246 504-777 16-268 (307)
290 KOG0579 Ste20-like serine/thre 100.0 6.5E-33 1.4E-37 294.8 11.1 278 505-808 34-317 (1187)
291 cd06648 STKc_PAK_II Catalytic 100.0 2.9E-32 6.2E-37 291.2 16.2 244 508-775 24-268 (285)
292 cd07840 STKc_CDK9_like Catalyt 100.0 1.8E-32 3.9E-37 293.0 14.6 262 506-775 2-283 (287)
293 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-32 6.5E-37 292.1 16.3 263 504-775 6-287 (291)
294 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.1E-32 6.7E-37 290.7 16.4 251 505-775 3-260 (283)
295 cd06616 PKc_MKK4 Catalytic dom 100.0 2.1E-32 4.5E-37 292.9 15.0 255 506-776 7-267 (288)
296 cd06635 STKc_TAO1 Catalytic do 100.0 4.8E-32 1E-36 294.1 18.0 253 505-785 27-286 (317)
297 cd06639 STKc_myosinIIIB Cataly 100.0 4.2E-32 9E-37 291.0 17.2 253 504-776 23-287 (291)
298 cd05578 STKc_Yank1 Catalytic d 100.0 2.3E-32 5E-37 287.5 14.6 246 505-774 2-253 (258)
299 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-32 3.7E-37 289.3 13.6 246 511-779 1-257 (265)
300 cd07842 STKc_CDK8_like Catalyt 100.0 4.5E-32 9.8E-37 294.4 17.2 267 505-775 2-312 (316)
301 cd05609 STKc_MAST Catalytic do 100.0 3.2E-32 6.9E-37 293.9 15.8 254 505-780 3-274 (305)
302 cd05572 STKc_cGK_PKG Catalytic 100.0 3.9E-32 8.5E-37 286.4 16.1 242 511-775 1-251 (262)
303 cd07860 STKc_CDK2_3 Catalytic 100.0 3.7E-32 7.9E-37 290.3 15.9 262 505-775 2-280 (284)
304 cd05580 STKc_PKA Catalytic dom 100.0 4.8E-32 1E-36 290.4 16.5 241 505-774 3-252 (290)
305 PHA03210 serine/threonine kina 100.0 1.6E-32 3.5E-37 314.5 12.9 204 501-708 146-368 (501)
306 cd07837 STKc_CdkB_plant Cataly 100.0 3.8E-32 8.2E-37 291.9 15.0 263 505-775 3-290 (295)
307 cd06614 STKc_PAK Catalytic dom 100.0 5.2E-32 1.1E-36 289.5 15.9 249 505-776 21-270 (286)
308 cd06608 STKc_myosinIII_like Ca 100.0 6.2E-32 1.4E-36 286.8 16.3 253 503-775 6-271 (275)
309 cd05122 PKc_STE Catalytic doma 100.0 8.2E-32 1.8E-36 281.6 16.8 248 505-775 2-250 (253)
310 KOG4250 TANK binding protein k 100.0 3.1E-32 6.7E-37 297.1 13.9 202 506-714 16-230 (732)
311 cd07843 STKc_CDC2L1 Catalytic 100.0 5.4E-32 1.2E-36 290.4 15.7 263 504-775 6-289 (293)
312 cd08225 STKc_Nek5 Catalytic do 100.0 5.2E-32 1.1E-36 284.5 14.8 249 505-776 2-254 (257)
313 cd05633 STKc_GRK3 Catalytic do 100.0 6.6E-32 1.4E-36 287.4 15.6 242 510-776 1-255 (279)
314 cd06657 STKc_PAK4 Catalytic do 100.0 7.5E-32 1.6E-36 288.8 16.0 244 509-776 26-270 (292)
315 cd07835 STKc_CDK1_like Catalyt 100.0 4E-32 8.7E-37 289.8 13.7 261 506-775 2-279 (283)
316 cd07864 STKc_CDK12 Catalytic d 100.0 9.4E-32 2E-36 289.9 16.0 266 501-775 5-298 (302)
317 cd07849 STKc_ERK1_2_like Catal 100.0 3.5E-32 7.6E-37 297.7 12.7 260 504-776 6-292 (336)
318 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.6E-32 1.4E-36 289.5 14.6 263 504-775 6-287 (291)
319 cd06606 STKc_MAPKKK Catalytic 100.0 1.4E-31 3.1E-36 281.1 16.8 248 506-775 3-256 (260)
320 KOG4645 MAPKKK (MAP kinase kin 100.0 2.9E-33 6.3E-38 321.1 4.1 245 508-776 1240-1494(1509)
321 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.1E-32 1.3E-36 295.9 14.2 262 504-776 6-291 (337)
322 cd07852 STKc_MAPK15 Catalytic 100.0 5.7E-32 1.2E-36 296.3 14.0 264 503-776 7-295 (337)
323 PHA02882 putative serine/threo 100.0 9.7E-32 2.1E-36 288.4 15.3 259 500-778 9-294 (294)
324 KOG1006 Mitogen-activated prot 100.0 6.8E-34 1.5E-38 274.6 -1.3 253 509-776 70-327 (361)
325 KOG0596 Dual specificity; seri 100.0 4.2E-32 9.1E-37 286.7 12.1 252 502-776 360-627 (677)
326 cd05577 STKc_GRK Catalytic dom 100.0 1E-31 2.2E-36 285.8 15.2 241 511-772 1-245 (277)
327 cd05118 STKc_CMGC Catalytic do 100.0 9E-32 2E-36 287.0 14.7 261 506-775 2-279 (283)
328 KOG1035 eIF-2alpha kinase GCN2 100.0 2.3E-32 5.1E-37 312.4 10.6 245 508-775 484-870 (1351)
329 cd07855 STKc_ERK5 Catalytic do 100.0 7.8E-32 1.7E-36 294.7 14.1 265 503-776 5-294 (334)
330 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-31 2.9E-36 292.6 15.8 267 505-780 2-295 (330)
331 KOG0986 G protein-coupled rece 100.0 1.3E-32 2.9E-37 283.8 7.3 197 507-711 189-389 (591)
332 cd08216 PK_STRAD Pseudokinase 100.0 3.8E-31 8.2E-36 286.9 19.0 262 508-776 7-295 (314)
333 KOG0983 Mitogen-activated prot 100.0 4E-32 8.7E-37 263.2 10.0 248 507-776 96-349 (391)
334 cd07850 STKc_JNK Catalytic dom 100.0 1.8E-31 3.9E-36 294.2 16.6 261 503-776 16-311 (353)
335 cd07836 STKc_Pho85 Catalytic d 100.0 2E-31 4.4E-36 284.6 16.5 263 505-775 2-280 (284)
336 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-31 2.4E-36 287.2 14.5 254 505-779 2-266 (288)
337 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-31 3E-36 285.5 15.0 258 506-775 2-278 (282)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 9.3E-32 2E-36 289.0 13.7 253 503-777 15-274 (296)
339 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-31 3.4E-36 289.2 15.4 261 504-775 13-306 (310)
340 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-31 2.5E-36 282.5 13.9 244 509-778 2-250 (260)
341 cd08530 STKc_CNK2-like Catalyt 100.0 1.6E-31 3.5E-36 280.5 14.6 249 505-776 2-253 (256)
342 cd08226 PK_STRAD_beta Pseudoki 100.0 2.5E-31 5.3E-36 290.0 16.7 262 509-776 4-308 (328)
343 cd07845 STKc_CDK10 Catalytic d 100.0 1.4E-31 3.1E-36 289.5 14.7 265 503-776 7-290 (309)
344 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.8E-31 6E-36 280.3 16.1 247 505-775 4-260 (264)
345 PLN00009 cyclin-dependent kina 100.0 1.3E-31 2.8E-36 287.6 13.9 264 504-775 3-283 (294)
346 cd08215 STKc_Nek Catalytic dom 100.0 3.1E-31 6.7E-36 278.4 16.4 251 505-776 2-255 (258)
347 cd07830 STKc_MAK_like Catalyti 100.0 4.2E-31 9.2E-36 281.9 17.4 262 506-776 2-280 (283)
348 cd07838 STKc_CDK4_6_like Catal 100.0 8.1E-31 1.8E-35 280.3 19.3 259 506-775 2-283 (287)
349 cd05613 STKc_MSK1_N N-terminal 100.0 3.2E-31 6.9E-36 284.0 16.1 250 505-775 2-267 (290)
350 cd06627 STKc_Cdc7_like Catalyt 100.0 2.9E-31 6.4E-36 278.1 15.5 246 505-775 2-250 (254)
351 cd05606 STKc_beta_ARK Catalyti 100.0 4.6E-31 1E-35 280.8 17.1 241 510-775 1-254 (278)
352 cd06634 STKc_TAO2 Catalytic do 100.0 5.3E-31 1.1E-35 284.7 17.6 249 503-779 15-270 (308)
353 KOG0586 Serine/threonine prote 100.0 1.4E-31 3.1E-36 288.3 13.0 247 504-777 57-307 (596)
354 KOG1024 Receptor-like protein 100.0 5.4E-32 1.2E-36 274.1 8.8 255 506-779 287-554 (563)
355 KOG0607 MAP kinase-interacting 100.0 1.8E-31 4E-36 263.7 11.2 264 496-775 74-360 (463)
356 PTZ00024 cyclin-dependent prot 100.0 3.3E-31 7.1E-36 290.1 14.2 258 507-777 13-314 (335)
357 cd05581 STKc_PDK1 Catalytic do 100.0 3.8E-31 8.2E-36 281.7 13.6 246 505-775 3-276 (280)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 4.4E-31 9.6E-36 289.6 13.9 263 505-782 17-305 (342)
359 PHA03390 pk1 serine/threonine- 100.0 1.7E-30 3.8E-35 274.6 17.3 239 506-775 17-261 (267)
360 cd06633 STKc_TAO3 Catalytic do 100.0 1.5E-30 3.2E-35 281.9 17.1 241 508-776 26-273 (313)
361 KOG0690 Serine/threonine prote 100.0 3.7E-31 7.9E-36 261.9 11.1 200 504-712 169-372 (516)
362 cd07829 STKc_CDK_like Catalyti 100.0 1.5E-30 3.2E-35 277.4 16.5 260 506-775 2-278 (282)
363 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-30 2.3E-35 282.9 15.3 264 503-775 8-307 (311)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 5E-31 1.1E-35 289.2 12.5 263 504-776 6-300 (342)
365 KOG0666 Cyclin C-dependent kin 100.0 1.3E-31 2.7E-36 264.1 6.6 205 504-712 25-244 (438)
366 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-30 3E-35 274.4 14.6 249 505-775 2-256 (260)
367 cd07857 STKc_MPK1 Catalytic do 100.0 9E-31 1.9E-35 286.1 13.1 262 505-776 2-292 (332)
368 KOG0696 Serine/threonine prote 100.0 3.2E-31 6.9E-36 269.7 8.4 245 499-769 345-594 (683)
369 cd05123 STKc_AGC Catalytic dom 100.0 2.7E-30 5.9E-35 270.2 15.4 236 511-772 1-240 (250)
370 KOG4236 Serine/threonine prote 100.0 4.1E-31 8.8E-36 276.2 8.1 237 508-774 569-817 (888)
371 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-30 3E-35 285.8 12.5 258 504-775 16-297 (343)
372 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.9E-30 1.3E-34 278.8 17.0 258 505-776 12-288 (328)
373 KOG1151 Tousled-like protein k 100.0 1.2E-30 2.7E-35 267.4 10.4 255 502-773 462-738 (775)
374 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.8E-30 3.9E-35 285.1 12.0 258 505-776 19-300 (345)
375 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-30 3.5E-35 285.3 11.0 258 505-776 17-298 (343)
376 KOG0603 Ribosomal protein S6 k 100.0 1.7E-30 3.7E-35 281.5 10.0 238 504-776 323-563 (612)
377 KOG0669 Cyclin T-dependent kin 100.0 3.8E-31 8.3E-36 253.4 3.6 283 507-804 21-340 (376)
378 KOG0604 MAP kinase-activated p 100.0 3.4E-30 7.3E-35 253.1 10.1 243 509-777 68-323 (400)
379 cd05576 STKc_RPK118_like Catal 100.0 9.6E-30 2.1E-34 263.9 13.4 221 514-772 4-225 (237)
380 KOG0612 Rho-associated, coiled 100.0 2.3E-30 4.9E-35 293.9 9.1 200 502-709 74-282 (1317)
381 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-29 2.7E-34 299.6 14.9 144 504-655 5-152 (669)
382 KOG0587 Traf2- and Nck-interac 100.0 2E-29 4.4E-34 280.0 15.4 252 503-776 19-282 (953)
383 smart00220 S_TKc Serine/Threon 100.0 4.9E-29 1.1E-33 258.8 15.0 238 515-775 1-240 (244)
384 KOG0671 LAMMER dual specificit 100.0 1.1E-29 2.4E-34 258.3 8.5 270 494-775 80-405 (415)
385 PLN03224 probable serine/threo 100.0 1.7E-28 3.7E-33 275.1 17.2 261 502-775 144-499 (507)
386 PLN03225 Serine/threonine-prot 100.0 1.4E-28 3E-33 283.4 16.0 261 503-776 132-450 (566)
387 KOG0662 Cyclin-dependent kinas 100.0 8.9E-29 1.9E-33 225.4 11.0 194 508-710 7-205 (292)
388 KOG0984 Mitogen-activated prot 100.0 4.6E-29 9.9E-34 232.8 7.3 197 508-710 51-254 (282)
389 KOG0614 cGMP-dependent protein 100.0 1E-29 2.2E-34 265.3 2.9 238 507-769 424-665 (732)
390 KOG0608 Warts/lats-like serine 100.0 1E-28 2.2E-33 263.5 10.3 242 496-755 617-909 (1034)
391 KOG1027 Serine/threonine prote 100.0 6.2E-29 1.3E-33 275.0 8.6 242 509-775 515-766 (903)
392 KOG0695 Serine/threonine prote 100.0 1.8E-28 3.9E-33 243.5 9.3 200 504-712 251-455 (593)
393 KOG0664 Nemo-like MAPK-related 99.9 4.2E-28 9E-33 234.9 4.9 193 508-709 58-259 (449)
394 cd00180 PKc Catalytic domain o 99.9 7.3E-26 1.6E-30 229.2 17.2 211 511-777 1-215 (215)
395 PF01453 B_lectin: D-mannose b 99.9 3.7E-27 8.1E-32 210.9 5.6 98 49-146 1-111 (114)
396 KOG0668 Casein kinase II, alph 99.9 1.4E-26 2.9E-31 219.3 9.5 194 503-712 38-237 (338)
397 cd00028 B_lectin Bulb-type man 99.9 1.9E-25 4E-30 202.2 14.6 110 11-123 5-116 (116)
398 KOG1152 Signal transduction se 99.9 2.4E-26 5.2E-31 244.0 7.7 192 507-709 565-770 (772)
399 smart00221 STYKc Protein kinas 99.9 2.4E-25 5.3E-30 228.4 15.1 197 506-710 2-202 (225)
400 KOG1345 Serine/threonine kinas 99.9 1.5E-25 3.2E-30 217.6 10.9 251 504-777 25-285 (378)
401 KOG0665 Jun-N-terminal kinase 99.9 2.1E-25 4.6E-30 222.0 8.0 254 509-776 23-310 (369)
402 KOG0576 Mitogen-activated prot 99.9 2.2E-25 4.7E-30 240.6 6.7 251 504-775 16-270 (829)
403 KOG1290 Serine/threonine prote 99.9 2.3E-24 4.9E-29 225.3 13.3 143 491-640 65-221 (590)
404 smart00108 B_lectin Bulb-type 99.9 4.6E-24 1E-28 192.6 13.6 108 11-122 5-114 (114)
405 KOG0670 U4/U6-associated splic 99.9 9.9E-25 2.1E-29 228.8 8.2 214 488-711 417-638 (752)
406 PLN00181 protein SPA1-RELATED; 99.9 6.9E-25 1.5E-29 265.9 7.4 196 555-776 28-265 (793)
407 KOG0195 Integrin-linked kinase 99.9 2.1E-24 4.5E-29 209.2 4.5 251 504-780 191-446 (448)
408 KOG1167 Serine/threonine prote 99.9 5.4E-23 1.2E-27 212.9 10.4 194 506-712 39-282 (418)
409 smart00750 KIND kinase non-cat 99.9 6.5E-23 1.4E-27 202.2 9.6 166 584-779 1-168 (176)
410 PRK09188 serine/threonine prot 99.9 9.3E-22 2E-26 211.7 12.7 163 502-682 17-194 (365)
411 KOG1023 Natriuretic peptide re 99.9 6.2E-22 1.3E-26 216.2 9.4 259 553-823 1-269 (484)
412 KOG1164 Casein kinase (serine/ 99.8 3.3E-20 7.1E-25 200.9 17.1 258 504-780 19-297 (322)
413 KOG1165 Casein kinase (serine/ 99.8 5.7E-21 1.2E-25 191.0 9.7 198 505-712 30-240 (449)
414 KOG1163 Casein kinase (serine/ 99.8 3.5E-21 7.6E-26 184.3 6.7 259 501-778 13-282 (341)
415 PF00954 S_locus_glycop: S-loc 99.8 2.3E-20 5E-25 166.9 9.0 109 184-317 1-110 (110)
416 COG0515 SPS1 Serine/threonine 99.8 7.8E-19 1.7E-23 191.0 18.3 261 505-776 2-275 (384)
417 cd05147 RIO1_euk RIO kinase fa 99.8 1.6E-19 3.4E-24 179.0 11.0 140 508-658 2-168 (190)
418 PRK10359 lipopolysaccharide co 99.8 1.2E-19 2.6E-24 181.4 9.6 174 498-702 26-216 (232)
419 KOG0590 Checkpoint kinase and 99.8 3.7E-20 8E-25 212.7 5.5 252 508-776 323-585 (601)
420 cd05145 RIO1_like RIO kinase f 99.8 1.9E-18 4E-23 172.1 13.5 142 508-659 2-169 (190)
421 KOG1240 Protein kinase contain 99.8 5.7E-19 1.2E-23 201.1 5.9 252 504-781 24-296 (1431)
422 PRK12274 serine/threonine prot 99.7 6.6E-18 1.4E-22 164.9 10.0 184 507-710 6-209 (218)
423 KOG1166 Mitotic checkpoint ser 99.7 3.3E-17 7.2E-22 191.3 13.9 198 498-706 693-901 (974)
424 PRK10345 hypothetical protein; 99.7 4.3E-17 9.2E-22 162.9 11.6 134 508-654 7-156 (210)
425 PF14531 Kinase-like: Kinase-l 99.7 2.1E-17 4.6E-22 170.3 8.9 231 507-767 16-288 (288)
426 smart00090 RIO RIO-like kinase 99.7 2.7E-16 5.8E-21 161.3 12.7 142 505-659 30-200 (237)
427 KOG0603 Ribosomal protein S6 k 99.7 2.1E-17 4.6E-22 180.3 1.9 186 510-710 1-193 (612)
428 PRK14879 serine/threonine prot 99.7 6E-16 1.3E-20 157.3 12.1 134 509-656 2-143 (211)
429 cd05144 RIO2_C RIO kinase fami 99.6 1.2E-15 2.7E-20 153.1 12.8 137 505-659 17-177 (198)
430 KOG4158 BRPK/PTEN-induced prot 99.6 5.4E-16 1.2E-20 158.9 9.9 197 557-778 274-512 (598)
431 PRK09605 bifunctional UGMP fam 99.6 1E-15 2.2E-20 177.1 13.3 133 507-657 337-477 (535)
432 KOG1033 eIF-2alpha kinase PEK/ 99.6 4.6E-17 1E-21 174.3 1.9 123 573-703 330-457 (516)
433 TIGR03724 arch_bud32 Kae1-asso 99.6 9.5E-16 2.1E-20 154.3 11.3 130 510-656 1-138 (199)
434 cd05119 RIO RIO kinase family, 99.5 2.5E-14 5.3E-19 142.4 11.1 138 508-658 2-165 (187)
435 cd05120 APH_ChoK_like Aminogly 99.5 5.1E-14 1.1E-18 134.5 12.5 134 508-656 3-138 (155)
436 PRK01723 3-deoxy-D-manno-octul 99.5 1.2E-13 2.6E-18 142.1 11.7 134 509-656 37-191 (239)
437 KOG0606 Microtubule-associated 99.5 1.3E-14 2.9E-19 166.0 4.2 162 508-714 88-264 (1205)
438 KOG0590 Checkpoint kinase and 99.4 6.7E-14 1.4E-18 161.2 3.7 254 504-775 21-285 (601)
439 TIGR01982 UbiB 2-polyprenylphe 99.4 3.1E-12 6.7E-17 143.1 11.9 141 509-659 123-309 (437)
440 KOG1266 Protein kinase [Signal 99.3 1.1E-12 2.5E-17 131.9 6.7 154 551-706 119-280 (458)
441 PF08276 PAN_2: PAN-like domai 99.3 7.1E-12 1.5E-16 100.1 6.1 64 341-407 2-65 (66)
442 cd05151 ChoK Choline Kinase (C 99.2 6.5E-11 1.4E-15 115.7 11.4 130 509-656 4-136 (170)
443 KOG0601 Cyclin-dependent kinas 99.2 7.3E-11 1.6E-15 129.8 9.1 254 498-776 109-379 (524)
444 PRK04750 ubiB putative ubiquin 99.1 7.6E-11 1.7E-15 133.2 7.2 141 509-659 125-316 (537)
445 cd05154 ACAD10_11_like Acyl-Co 99.1 1.5E-09 3.1E-14 111.2 13.0 142 509-656 4-206 (223)
446 COG3642 Mn2+-dependent serine/ 99.0 2.3E-09 5E-14 101.2 11.4 131 509-656 2-140 (204)
447 cd05146 RIO3_euk RIO kinase fa 99.0 2.1E-09 4.6E-14 105.6 11.3 138 509-659 3-176 (197)
448 KOG1243 Protein kinase [Genera 99.0 2.3E-09 4.9E-14 119.1 11.8 231 523-781 33-264 (690)
449 cd01098 PAN_AP_plant Plant PAN 99.0 1.2E-09 2.5E-14 93.0 6.7 71 344-421 12-84 (84)
450 KOG0601 Cyclin-dependent kinas 98.9 1E-09 2.3E-14 120.8 6.9 192 505-707 267-465 (524)
451 KOG3087 Serine/threonine prote 98.9 1.1E-08 2.3E-13 96.0 10.9 142 508-656 12-165 (229)
452 cd00129 PAN_APPLE PAN/APPLE-li 98.8 6.6E-09 1.4E-13 85.7 5.0 67 342-419 7-79 (80)
453 KOG3741 Poly(A) ribonuclease s 98.8 6.7E-08 1.5E-12 104.0 13.1 171 516-707 289-475 (655)
454 PF01163 RIO1: RIO1 family; I 98.7 1.1E-07 2.3E-12 93.3 11.8 126 518-658 1-157 (188)
455 KOG0606 Microtubule-associated 98.7 7.9E-09 1.7E-13 119.5 2.2 197 508-712 809-1039(1205)
456 PRK15123 lipopolysaccharide co 98.6 1.8E-07 3.9E-12 97.4 11.8 139 511-656 30-194 (268)
457 COG4248 Uncharacterized protei 98.5 3.3E-06 7.1E-11 88.9 17.0 196 507-712 15-226 (637)
458 COG0478 RIO-like serine/threon 98.5 1.1E-06 2.3E-11 88.4 11.7 136 505-657 93-252 (304)
459 KOG2137 Protein kinase [Signal 98.4 7.5E-08 1.6E-12 107.7 1.4 152 610-776 105-265 (700)
460 PRK09902 hypothetical protein; 98.3 6.1E-06 1.3E-10 81.3 12.9 138 511-656 26-179 (216)
461 PF06293 Kdo: Lipopolysacchari 98.3 1.5E-06 3.2E-11 87.6 8.9 107 543-657 55-171 (206)
462 COG0661 AarF Predicted unusual 98.3 1.6E-06 3.5E-11 97.7 9.8 142 509-659 131-317 (517)
463 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.2E-05 2.5E-10 82.1 12.1 142 509-656 7-182 (226)
464 KOG1235 Predicted unusual prot 98.1 9.8E-06 2.1E-10 91.0 9.8 140 509-659 167-357 (538)
465 COG1718 RIO1 Serine/threonine 98.1 3.9E-05 8.5E-10 76.6 11.7 138 510-659 55-218 (268)
466 PF06176 WaaY: Lipopolysacchar 98.0 4.1E-05 8.9E-10 75.8 11.1 141 498-656 26-183 (229)
467 PF01453 B_lectin: D-mannose b 98.0 9E-05 1.9E-09 66.5 11.9 102 11-124 9-114 (114)
468 cd05150 APH Aminoglycoside 3'- 97.9 7.5E-05 1.6E-09 77.6 12.1 142 511-656 6-193 (244)
469 PF01636 APH: Phosphotransfera 97.9 6.1E-05 1.3E-09 77.5 11.4 144 509-656 3-197 (239)
470 KOG0576 Mitogen-activated prot 97.9 3.6E-06 7.7E-11 93.3 1.8 183 508-709 247-431 (829)
471 PF12260 PIP49_C: Protein-kina 97.9 3.3E-05 7.1E-10 76.1 7.9 104 548-657 8-112 (188)
472 smart00108 B_lectin Bulb-type 97.9 1.6E-05 3.5E-10 71.6 5.0 53 67-119 23-79 (114)
473 cd00028 B_lectin Bulb-type man 97.8 1.9E-05 4.1E-10 71.4 4.7 53 68-120 24-81 (116)
474 PLN02876 acyl-CoA dehydrogenas 97.7 0.0003 6.4E-09 86.1 14.1 79 508-586 43-131 (822)
475 smart00473 PAN_AP divergent su 97.6 0.00021 4.6E-09 59.2 7.1 58 345-408 5-64 (78)
476 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0008 1.7E-08 66.6 11.7 127 509-650 7-165 (199)
477 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00058 1.3E-08 70.4 11.3 74 509-588 3-83 (235)
478 PRK10593 hypothetical protein; 97.5 0.0013 2.8E-08 70.3 13.7 76 508-586 19-100 (297)
479 TIGR02721 ycfN_thiK thiamine k 97.5 0.00065 1.4E-08 71.1 11.3 140 510-656 3-175 (256)
480 PRK09550 mtnK methylthioribose 97.5 0.00095 2.1E-08 73.3 12.7 75 509-585 32-117 (401)
481 cd05157 ETNK_euk Ethanolamine 97.5 0.00091 2E-08 68.9 11.3 74 509-587 4-80 (235)
482 PF13095 FTA2: Kinetochore Sim 97.5 0.001 2.2E-08 65.3 10.8 125 503-654 37-206 (207)
483 COG2112 Predicted Ser/Thr prot 97.4 0.00071 1.5E-08 64.1 8.8 129 507-657 26-156 (201)
484 cd05153 HomoserineK_II Homoser 97.1 0.0026 5.5E-08 68.2 10.8 143 509-655 20-204 (296)
485 cd01100 APPLE_Factor_XI_like S 97.0 0.00087 1.9E-08 54.8 4.3 34 369-404 25-58 (73)
486 TIGR00938 thrB_alt homoserine 97.0 0.0069 1.5E-07 65.2 12.5 144 509-655 28-216 (307)
487 cd05156 ChoK_euk Choline Kinas 97.0 0.004 8.6E-08 66.9 10.6 143 509-656 4-213 (302)
488 PRK05231 homoserine kinase; Pr 96.9 0.0083 1.8E-07 65.0 12.2 143 509-655 28-216 (319)
489 PF03881 Fructosamin_kin: Fruc 96.7 0.012 2.5E-07 62.2 10.8 72 509-584 23-97 (288)
490 cd05152 MPH2' Macrolide 2'-Pho 96.5 0.029 6.2E-07 59.2 12.0 31 626-656 185-216 (276)
491 PLN02236 choline kinase 96.4 0.024 5.3E-07 61.8 11.4 142 510-656 43-231 (344)
492 KOG1035 eIF-2alpha kinase GCN2 96.3 0.0042 9E-08 74.4 5.3 197 546-778 229-436 (1351)
493 KOG2268 Serine/threonine prote 96.3 0.0056 1.2E-07 63.5 5.5 134 505-656 94-251 (465)
494 COG3173 Predicted aminoglycosi 96.3 0.046 9.9E-07 58.1 12.3 143 513-657 35-229 (321)
495 PLN02756 S-methyl-5-thioribose 95.9 0.075 1.6E-06 58.4 12.2 80 508-590 37-128 (418)
496 TIGR01767 MTRK 5-methylthiorib 95.8 0.058 1.3E-06 58.2 10.2 79 510-590 2-92 (370)
497 KOG2270 Serine/threonine prote 95.5 0.083 1.8E-06 56.1 10.0 139 510-658 151-315 (520)
498 PF01633 Choline_kinase: Choli 95.5 0.051 1.1E-06 54.9 8.5 31 626-656 143-174 (211)
499 COG2334 Putative homoserine ki 95.3 0.18 3.8E-06 54.3 12.1 138 515-655 37-227 (331)
500 PRK12396 5-methylribose kinase 95.0 0.067 1.5E-06 58.4 7.7 81 508-590 34-125 (409)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-55 Score=473.15 Aligned_cols=287 Identities=46% Similarity=0.786 Sum_probs=253.4
Q ss_pred CCcccchHHHHHHhhccc--cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCccccccee
Q 038743 491 APVNFTYRDLQIRTSNFA--QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYC 568 (839)
Q Consensus 491 ~~~~~~~~~l~~~~~~~~--~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~ 568 (839)
....|++.++..||.+|. +.||+|+||.||+|.+++|+.||||++.....+..++|.+|+.++.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 455699999999999998 599999999999999999999999998765433156799999999999999999999999
Q ss_pred ecCC-ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCcee
Q 038743 569 SEGS-NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647 (839)
Q Consensus 569 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~k 647 (839)
.+.+ +++||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999 599999999999999999754221 889999999999999999999999888999999999999999999999
Q ss_pred ecccCcceecCCCCceeEEee-ccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhh
Q 038743 648 VSDFGLAKLMGREHSQVVTMV-RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 648 l~DfGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
|+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+|+||++|+++.+.........+..|+...
T Consensus 218 lsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 218 LSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred ccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 9999999765431 1222222 7999999999999999999999999999999999999999876544445588999999
Q ss_pred hccCccccccccccc-CCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 727 MTNGTPLKVADRRLE-GAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~-~~~~~-~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
+.++...+++|+++. ..... +++.++.++|.+|++.+|.+||+|.+|+++|+...
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 999999999999987 56554 78999999999999999999999999999996544
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=396.12 Aligned_cols=255 Identities=31% Similarity=0.480 Sum_probs=210.0
Q ss_pred ccccccccCCCceEEEEEeCCCcEEEEEEecccCCcc--hHHHHHHHHHhhccccCCcccccceeecCC-ceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-NRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~~~ 582 (839)
.+.+.||+|+||+||+|.+.....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ...+|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3455699999999999999555559999997543222 458999999999999999999999999988 7999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCe-eeecCCCCCcEEECCCC-ceeecccCcceecCCC
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR-IIHCDIKPENILLDENF-CPKVSDFGLAKLMGRE 660 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 660 (839)
+|+|..+|+.. ....+++..+++++.|||+||.|||+. . ||||||||+||||+.++ ++||+|||+++.....
T Consensus 124 ~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 124 GGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 99999999643 467899999999999999999999996 5 99999999999999997 9999999999876443
Q ss_pred CceeEEeeccccceeCccccc--CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVS--NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~--~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
. ...+...||+.|||||++. ...|+.|+|||||||+||||+||+.||....... .. ..++..
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~---~~------------~~v~~~ 261 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ---VA------------SAVVVG 261 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH---HH------------HHHHhc
Confidence 2 2233467999999999999 6699999999999999999999999997544311 00 111222
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
..+..++......+..++.+||+.+|..||++.+++.+|+....
T Consensus 262 ~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 262 GLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 22333344466678888888999999999999999999986543
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=389.73 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=220.1
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
.++......+.+.||+|.||.|+.|.++....||+|.++.. ......|.+|+++|.+|+|+|||+++|+|..+..++||
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 44555556678899999999999999988889999999765 34457899999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
||||+.|+|.+||.. ..+..++..+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||||+..
T Consensus 280 tE~m~~GsLl~yLr~---~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRT---REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEecccCcHHHHhhh---cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccccc
Confidence 999999999999954 3567899999999999999999999995 9999999999999999999999999999976
Q ss_pred CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
.++.........-+..|.|||.+....++.|+|||||||+||||+| |+.|+......+ ..+.+
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------------v~~~l 417 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------------VLELL 417 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----------------HHHHH
Confidence 6665555555566889999999999999999999999999999996 777765332211 12233
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
+.-.+-..+..++..+.+++..||+.+|++|||++.+...|+....
T Consensus 418 e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 418 ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 3333344455566778888888999999999999999998876543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=357.87 Aligned_cols=256 Identities=27% Similarity=0.390 Sum_probs=205.5
Q ss_pred cchHHHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCC
Q 038743 495 FTYRDLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS 572 (839)
Q Consensus 495 ~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 572 (839)
++..||+. ...||+|..|+|||+.+ ++++.+|+|.+.... +...+++.+|++++++.+||+||.++|.|....
T Consensus 76 i~~~dle~-----~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 76 ISLSDLER-----LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG 150 (364)
T ss_pred cCHHHhhh-----hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence 44555543 56899999999999987 468899999994332 344678999999999999999999999999888
Q ss_pred -ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 573 -NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 573 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
...++||||.+|+|+.++. ....+++...-+|+.+|++||.|||+. .+||||||||+||||+.+|++|||||
T Consensus 151 ~~isI~mEYMDgGSLd~~~k-----~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILK-----RVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred ceEEeehhhcCCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccc
Confidence 5999999999999999983 336789999999999999999999974 59999999999999999999999999
Q ss_pred CcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 652 GLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 652 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
|.++.+-+. ......||..|||||.+.+..|+.++||||||+.++|+.+|+.|+-...+.. ..|.. +
T Consensus 224 GVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~----~~~~~--L---- 290 (364)
T KOG0581|consen 224 GVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY----LDIFE--L---- 290 (364)
T ss_pred cccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC----CCHHH--H----
Confidence 999977544 3455679999999999999999999999999999999999999996542111 01100 0
Q ss_pred ccccccccccCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~-~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+..+++... +..+. ....++..++..|++.+|.+||++.|+++.
T Consensus 291 l~~Iv~~pp-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 291 LCAIVDEPP-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHhcCCC-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 011222110 11122 245567778888999999999999998764
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.6e-44 Score=398.92 Aligned_cols=268 Identities=26% Similarity=0.422 Sum_probs=220.7
Q ss_pred chHHHHHHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCccccccee
Q 038743 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYC 568 (839)
Q Consensus 496 ~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~ 568 (839)
...++......+.+.||+|+||+||+|+.. +.+.||||.++..... ...+|++|+++++.++|||||+|+|+|
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 334566666677889999999999999763 3568999999876555 678999999999999999999999999
Q ss_pred ecCCceEEEEeeccCCChhhhcccCCCCC---------cccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEE
Q 038743 569 SEGSNRLLVYEFMKNGSLDKWIFPSYHHR---------DRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENIL 639 (839)
Q Consensus 569 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nil 639 (839)
.+++..+||+|||..|+|.+||....... ...|+..+.+.||.|||.||.||-++ .++||||.++|+|
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCL 635 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCL 635 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhce
Confidence 99999999999999999999996432211 23488999999999999999999996 9999999999999
Q ss_pred ECCCCceeecccCcceec-CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCc
Q 038743 640 LDENFCPKVSDFGLAKLM-GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDF 717 (839)
Q Consensus 640 l~~~~~~kl~DfGla~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~ 717 (839)
|.++..|||+||||++.. ..+..+......-.++||+||.+..++||.++|||||||+||||++ |+-|+.+....+
T Consensus 636 Vge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-- 713 (774)
T KOG1026|consen 636 VGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-- 713 (774)
T ss_pred eccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH--
Confidence 999999999999999854 3333333334445789999999999999999999999999999995 888886544332
Q ss_pred cchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 718 FYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
+.+.+..+++ -+.+...+..+..|+..||+.+|++||+++||-..|+....
T Consensus 714 -----VIe~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 -----VIECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred -----HHHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 3333333332 23455677788999999999999999999999999986543
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-43 Score=357.49 Aligned_cols=199 Identities=30% Similarity=0.494 Sum_probs=175.6
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEeccc--CCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
.|.+.+.||+|+||+||+|++. ++..||||.+.+. .....+.+..|+++|+.++|||||++++++...+..+|||||
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence 3556678999999999999874 5899999999655 334455688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC------CceeecccCcc
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN------FCPKVSDFGLA 654 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~------~~~kl~DfGla 654 (839)
|.+|+|.+||. ....+++.....++.|||.||++||+ ++||||||||.||||+.. -.+||+|||+|
T Consensus 91 C~gGDLs~yi~-----~~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 91 CNGGDLSDYIR-----RRGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred CCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999994 44589999999999999999999999 699999999999999754 56899999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
+.+... ......+|++.|||||++..++|+.|+|+||+|+|||++++|+.||+...
T Consensus 163 R~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 163 RFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 987632 22345679999999999999999999999999999999999999998543
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-42 Score=352.72 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=203.8
Q ss_pred HHHhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCc-------chHHHHHHHHHhhccccCCcccccceeecCC
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPH-------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS 572 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 572 (839)
....|.+.+.||+|+||.|-+|. ..+|+.||||++.+.... ......+|+++|++|+|||||++++++.+.+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45567778999999999999994 568999999999653211 1223579999999999999999999999999
Q ss_pred ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC---Cceeec
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN---FCPKVS 649 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~---~~~kl~ 649 (839)
..||||||+.||+|.+++. ....+.+..-..++.|++.|+.|||++ +|+||||||+|||+..+ ..+||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv-----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVV-----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred ceEEEEEEecCccHHHHHH-----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 9999999999999999985 345677777788999999999999996 99999999999999655 789999
Q ss_pred ccCcceecCCCCceeEEeeccccceeCcccccCCCC---CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhh
Q 038743 650 DFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI---TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 650 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
|||+|+..+ ....+...+||+.|.|||++.+... ..++|+||+|||||-+++|.+||........ ..++
T Consensus 322 DFGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s------l~eQ 393 (475)
T KOG0615|consen 322 DFGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS------LKEQ 393 (475)
T ss_pred ccchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc------HHHH
Confidence 999999875 3445667889999999999987643 3578999999999999999999975443220 1122
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+..++.. .......+..++.++++.++|+.||++||++.|+++.
T Consensus 394 I~~G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 394 ILKGRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred HhcCccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2222211 1112234556778899999999999999999999764
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-42 Score=369.71 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=208.3
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+|...+.||+|+|+.+|+++. ..|+.||+|++.+.. ....+...+|+++.++|+|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5677788999999999999977 889999999997643 233456889999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
|+|.+++|.+++ .+.+.+++.+...++.||+.||.|||+. +|||||||-.|+||++++++||+|||||..+.
T Consensus 98 ELC~~~sL~el~-----Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELL-----KRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHH-----HhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence 999999999988 3668999999999999999999999996 89999999999999999999999999999887
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
.+.... ...+|||.|+|||++....++..+||||+|||+|-||.|++||+...-.+.+ ..++.. +.
T Consensus 170 ~~~Erk-~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety-------~~Ik~~------~Y 235 (592)
T KOG0575|consen 170 YDGERK-KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY-------NKIKLN------EY 235 (592)
T ss_pred Cccccc-ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH-------HHHHhc------Cc
Confidence 654443 4467999999999999999999999999999999999999999854322111 111111 11
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+ +........+++...|+.+|.+||++++|+..
T Consensus 236 ~~----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 236 SM----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cc----ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 11233345677777899999999999999864
No 9
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-43 Score=380.28 Aligned_cols=254 Identities=25% Similarity=0.440 Sum_probs=213.1
Q ss_pred hhccccccccCCCceEEEEEeCC----CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
...+.++||.|.||+|++|+++- ...||||.|+.-.. ....+|+.|+.||++..||||++|.|+....+..++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 33456799999999999998742 45899999976543 34568999999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
|||+||+|+.||. .++..+.+.++.-++.+||.||+||.+. ++|||||.++|||++.+..+|++||||++.+.
T Consensus 710 EyMENGsLDsFLR----~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 710 EYMENGSLDSFLR----QNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhCCcHHHHHh----hcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999995 3456699999999999999999999996 99999999999999999999999999999886
Q ss_pred CCCceeEEe--eccccceeCcccccCCCCCCcccEEehhHHHHHHH-hCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 659 REHSQVVTM--VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV-GGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 659 ~~~~~~~~~--~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
++.....+. ..-..+|.|||.+..++++.++||||||||+||++ .|.+|+...... +...-
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ----------------dVIka 846 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ----------------DVIKA 846 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH----------------HHHHH
Confidence 655333332 23467999999999999999999999999999988 588887432211 11222
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
++..++-..+++++..+.++++.|||.|-.+||.+.+++.+|++.
T Consensus 847 Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 847 IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 233334455677888999999999999999999999999999764
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-42 Score=335.65 Aligned_cols=261 Identities=24% Similarity=0.368 Sum_probs=207.3
Q ss_pred HHHhhccccccccCCCceEEEE-EeCCCcEEEEEEeccc--CCcchHHHHHHHHHhhccccCCcccccc-eeecCCc-eE
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSMHHMNLVRLCG-YCSEGSN-RL 575 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g-~~~~~~~-~~ 575 (839)
..+.+.+.++||+|.||+|||+ .+.+|..||.|.+.-. ..+....+..|+.+|++|+|||||++++ -+.+... .+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 3455677889999999999999 4578999999998632 2334456899999999999999999999 4555555 89
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccC-CeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR-NRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
|||||+..|+|...+..- ....+.+++..+++++.|++.||..+|.... .-|+||||||.||+|+.+|.+||+||||+
T Consensus 97 ivmE~c~~GDLsqmIk~~-K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHF-KKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHhhcccCHHHHHHHH-HhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999988533 3466789999999999999999999998432 24899999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
+.+.....- ....+|||.||+||.+...+|+.|+||||+||++|||..-++||.+.. +-. .-+.+..+..
T Consensus 176 r~l~s~~tf-A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n------~~~-L~~KI~qgd~-- 245 (375)
T KOG0591|consen 176 RFLSSKTTF-AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN------LLS-LCKKIEQGDY-- 245 (375)
T ss_pred hHhcchhHH-HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc------HHH-HHHHHHcCCC--
Confidence 988654433 344679999999999999999999999999999999999999997542 111 1122222211
Q ss_pred cccccccCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 735 VADRRLEGAVE-EEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 735 ~~~~~l~~~~~-~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
..++ .-....+.+++..|+..||+.||+...+++.+..
T Consensus 246 -------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 -------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1112 3445667778888999999999986666555544
No 11
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-40 Score=347.56 Aligned_cols=268 Identities=21% Similarity=0.309 Sum_probs=212.0
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcc-hHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
+|+....--|.++||+|.||.|.+.....+..||||+++...... .++|.+|+++|.+++|||||+++|+|..++..++
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 344444456778999999999999999888999999998765443 4789999999999999999999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
|+|||++|+|.+||.+. ....++-...++|+.|||.||+||.+. .++||||.++|||+|.++++||+|||+++.
T Consensus 613 I~EYmEnGDLnqFl~ah---eapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAH---ELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHhcCcHHHHHHhc---cCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccc
Confidence 99999999999999543 122255667788999999999999995 999999999999999999999999999994
Q ss_pred c-CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHH--hCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 657 M-GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV--GGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 657 ~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ell--tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
+ ..+..+.....+-+++|||||.+..++++.++|||+||+.+||++ +...||....+... .+..-..+..+...
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~~~ 763 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQGRQ 763 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCCcc
Confidence 4 444444455566788999999999999999999999999999987 57788864332211 11111111111111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
. ....+.-+...+.+++++||..+-.+||+++++...|.+.
T Consensus 764 ~------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 V------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred e------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 1112233456678999999999999999999999998754
No 12
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-40 Score=339.78 Aligned_cols=267 Identities=27% Similarity=0.408 Sum_probs=206.8
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhc--cccCCcccccceeecCC----ceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMNLVRLCGYCSEGS----NRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~~lv~ 578 (839)
..+.++||+|.||.||||.+ +++.||||++. .+....|.+|-+++.. ++|+||++++++-.... +.+||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL-~~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL-DNRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhc-cCceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 45678999999999999999 56999999986 3455679999888776 48999999999876655 889999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhc------cCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ------CRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
||.++|+|.+|| ....++|....+|+..+++||+|||++ .+++|+|||||++||||..|+++.|+|||
T Consensus 288 ~fh~kGsL~dyL------~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 288 EFHPKGSLCDYL------KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeccCCcHHHHH------HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999 456899999999999999999999974 46789999999999999999999999999
Q ss_pred cceecCCCCcee-EEeeccccceeCcccccCCC-C-----CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--h
Q 038743 653 LAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRP-I-----TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--A 723 (839)
Q Consensus 653 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~-~-----s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~ 723 (839)
||..+....... ....+||.+|||||++.+.- + -.+.||||+|.|||||+++-.-++. .....+.+|.. +
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEAEV 440 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhHHh
Confidence 999886543332 22367999999999997642 2 2479999999999999998766543 22222322221 1
Q ss_pred hhhhccCcccc-cccccccCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 724 FKEMTNGTPLK-VADRRLEGAVEE-----EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 724 ~~~~~~~~~~~-~~~~~l~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
-.+..-+.+.+ ++.++.++.++. ..+..+.+.+..||.+||+.|.|+.=|.+.+.+...
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 11111111111 334444444432 456778899999999999999999999998876554
No 13
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=349.59 Aligned_cols=265 Identities=25% Similarity=0.404 Sum_probs=209.9
Q ss_pred chHHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 496 ~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
.+.|+......+.+.||+|.||+||+|.+.. .||||++..... ...+.|++|+..+++-+|.||+-+.|+|.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 5566666666778899999999999999853 499999965443 345689999999999999999999999998877
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.+|..+|+|.+|..+|+ ..+..|+..+.++||.|||+||.|||. ++|||||||..||||.+++.|||+||||
T Consensus 463 -AIiTqwCeGsSLY~hlH----v~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLH----VQETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred -eeeehhccCchhhhhcc----chhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccc
Confidence 99999999999999995 345789999999999999999999999 5999999999999999999999999999
Q ss_pred ceecCCC-CceeEEeeccccceeCcccccC---CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 654 AKLMGRE-HSQVVTMVRGTRGYLAPEWVSN---RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 654 a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
+..-..- ..+......|...|||||+++. .+|+..+||||||+|+|||++|..||......... |.. -.
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi----fmV---Gr 607 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII----FMV---GR 607 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE----EEe---cc
Confidence 9764332 1222334558889999999975 57999999999999999999999999833322211 111 00
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
| .+.+++. .........+.+++..||..++++||.+.+|+.+|+....
T Consensus 608 G----~l~pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 608 G----YLMPDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred c----ccCccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1 0111110 1122344566777777999999999999999998877644
No 14
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=342.28 Aligned_cols=239 Identities=26% Similarity=0.424 Sum_probs=198.4
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChh
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
.+-||.|+.|.||+|++ .++.||||+++.. -..+++-|++|+||||+.+.|+|......+||||||+.|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 35799999999999999 5788999987532 235788899999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEe
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 667 (839)
+.|. .++.+.-.....+..+||.||.|||.+ .|||||||.-||||..+..+||+|||-++..... .....
T Consensus 201 ~VLk-----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMS 270 (904)
T KOG4721|consen 201 EVLK-----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMS 270 (904)
T ss_pred HHHh-----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhh
Confidence 9994 556788888899999999999999996 9999999999999999999999999999876443 22345
Q ss_pred eccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHH
Q 038743 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEE 747 (839)
Q Consensus 668 ~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 747 (839)
+.||..|||||++.+.+.+.|+|||||||||||||||..|+....... +.| .+-...|.-..+..
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIw-----------GVGsNsL~LpvPst 335 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIW-----------GVGSNSLHLPVPST 335 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEE-----------eccCCcccccCccc
Confidence 679999999999999999999999999999999999999996433211 111 11122233333445
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 748 ELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 748 ~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
++..+.-++..||+..|..||++.+++..|+-
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 55556666677999999999999999999964
No 15
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=356.48 Aligned_cols=269 Identities=27% Similarity=0.397 Sum_probs=209.7
Q ss_pred CcccchHHHHHHhhccccccccCCCceEEEEEeCC--C---cEEEEEEecc---cCCcchHHHHHHHHHhhccccCCccc
Q 038743 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD--G---TLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVR 563 (839)
Q Consensus 492 ~~~~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~--~---~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~ 563 (839)
|..-.-.+|......+.++||+|+||.||+|++.. + ..||||..+. .......+|+.|+++|+.++|||||+
T Consensus 146 PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 146 PIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred cccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 33334456666666777999999999999997743 2 2389999875 23455678999999999999999999
Q ss_pred ccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC
Q 038743 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN 643 (839)
Q Consensus 564 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~ 643 (839)
++|++......++|||+|+||+|+++|.. ....++..+++.++.+.|.||+|||+ +.+|||||.++|||++.+
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k----~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKK----NKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKK 298 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCC
Confidence 99999999999999999999999999943 23369999999999999999999999 599999999999999999
Q ss_pred CceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhh
Q 038743 644 FCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 644 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 722 (839)
..+||+||||++.-...... .....-+.+|+|||.+....++.++|||||||++||+++ |..|+.+....+
T Consensus 299 ~~vKISDFGLs~~~~~~~~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~------- 370 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYVMK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE------- 370 (474)
T ss_pred CeEEeCccccccCCcceeec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH-------
Confidence 99999999998754311111 112245689999999999999999999999999999998 788886443221
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCC
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADI 783 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~ 783 (839)
+... ++....+...+...+..+..+...||..+|++||+|.++.+.|+.....
T Consensus 371 v~~k--------I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 371 VKAK--------IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred HHHH--------HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 1111 1111111222223344555666689999999999999999999876553
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=336.64 Aligned_cols=255 Identities=27% Similarity=0.349 Sum_probs=200.0
Q ss_pred hccccccccCCCceEEEEEeCC-CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCC--ceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS--NRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lv~e~~ 581 (839)
+...+.||+|+||+||++...+ |+..|||.+........+.+.+|+++|.+++|||||+.+|...... ...+.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 4456899999999999997754 8999999986553333566899999999999999999999855544 689999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecCC-
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGR- 659 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~~- 659 (839)
++|+|.+++... .+ .|++..+..++.||++||+|||++ +|+||||||+||||+. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~---g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 99 PGGSLSDLIKRY---GG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred CCCcHHHHHHHc---CC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 999999999432 22 699999999999999999999985 9999999999999999 79999999999987663
Q ss_pred -CCceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 660 -EHSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 660 -~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
..........||+.|||||++..+ ....++|||||||++.||+||++||.... ....+......+.
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-----~~~~~~~~ig~~~------- 239 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-----EEAEALLLIGRED------- 239 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-----chHHHHHHHhccC-------
Confidence 222223457799999999999864 33459999999999999999999996420 0111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+.++........+++..|++.+|++|||++++++..--.
T Consensus 240 --~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 240 --SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred --CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 11133333445667788889999999999999999876443
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=318.26 Aligned_cols=261 Identities=21% Similarity=0.250 Sum_probs=201.6
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+..-++|+|+||.|||.+.. +|+.||||++..... .-.+-.++|+++|++++|+|+|.++.+|......+||+||++
T Consensus 5 E~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d 84 (396)
T KOG0593|consen 5 EKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD 84 (396)
T ss_pred hhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc
Confidence 33458999999999999874 599999999954322 224567899999999999999999999999999999999998
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
..-|+++= .....++...+.+++.|+++|+.|+|++ ++|||||||+||||+.++.+||||||+|+.+.. ..
T Consensus 85 hTvL~eLe-----~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 85 HTVLHELE-----RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred hHHHHHHH-----hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 86655432 2345678888999999999999999995 899999999999999999999999999998865 33
Q ss_pred eeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh--------hhhccCcc-
Q 038743 663 QVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF--------KEMTNGTP- 732 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~- 732 (839)
...+..+.|..|.|||.+.+ .+|...+||||+||++.||++|.+.|-+..+.+..+.+.... +.+.....
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 44567789999999999987 789999999999999999999999887665543322221111 11111111
Q ss_pred cccccccccCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 LKVADRRLEGAV-----EEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 ~~~~~~~l~~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..+.-|.....- -+.....+++++..|++.||++|++-++++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111100 0123346888999999999999999999875
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=329.80 Aligned_cols=242 Identities=23% Similarity=0.315 Sum_probs=195.3
Q ss_pred HHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
...+.+.++||+|+||+|++++. ++++.+|+|++++... ...+....|..+|.+++||+||+++-.+++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 34456788999999999999965 5689999999976532 2345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
+||+.||.|..+| +++..+++....-++..|+.||.|||+. +||||||||+|||||++|+++|+||||++..
T Consensus 104 ld~~~GGeLf~hL-----~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHL-----QREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EeccCCccHHHHH-----HhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 9999999999999 4567888888888899999999999994 9999999999999999999999999999964
Q ss_pred CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
-... ......+||+.|||||++.+..|+..+|.||+|+++|||++|.+||........ .+.+..++.
T Consensus 176 ~~~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~-------~~~I~~~k~----- 242 (357)
T KOG0598|consen 176 LKDG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM-------YDKILKGKL----- 242 (357)
T ss_pred ccCC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH-------HHHHhcCcC-----
Confidence 3322 233447899999999999999999999999999999999999999975443211 111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCC
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRP 768 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RP 768 (839)
..... -......+++...++.+|++|.
T Consensus 243 -~~~p~---~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 -PLPPG---YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -CCCCc---cCCHHHHHHHHHHhccCHHHhc
Confidence 01111 1223345566668999999996
No 19
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=376.64 Aligned_cols=264 Identities=27% Similarity=0.451 Sum_probs=210.7
Q ss_pred HHHHhhccccccccCCCceEEEEEeCC--C----cEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCC
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--G----TLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS 572 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~--~----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 572 (839)
+......+.+.||+|.||.||+|.+.+ | ..||||.+.+.. .+...+|.+|..+|+.++|||||+++|+|.+..
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 444555677899999999999997743 3 259999997654 455678999999999999999999999999999
Q ss_pred ceEEEEeeccCCChhhhcccCCC--CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecc
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYH--HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~D 650 (839)
..++++|||++|+|..||.+.+. .....|.....+.++.|||+|+.|||+ +++|||||.++||||++...+||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcc
Confidence 99999999999999999975522 225678899999999999999999999 4999999999999999999999999
Q ss_pred cCcceec-CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhc
Q 038743 651 FGLAKLM-GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728 (839)
Q Consensus 651 fGla~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 728 (839)
||||+.+ ..+.........-..+|||||.+..+.++.|+|||||||+||||+| |..||......+ +...+.
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-------v~~~~~ 918 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-------VLLDVL 918 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-------HHHHHH
Confidence 9999943 3333332222344578999999999999999999999999999996 677775333221 111111
Q ss_pred cCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 729 NGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 729 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
++ .+| ..+..+...+.+++..||+.+|++||++..+++.+..+..
T Consensus 919 ~g-------gRL--~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 919 EG-------GRL--DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred hC-------Ccc--CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 11 112 2234556677899999999999999999999998876543
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-39 Score=335.66 Aligned_cols=263 Identities=23% Similarity=0.308 Sum_probs=204.4
Q ss_pred hccccccccCCCceEEEEE-eCCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC--CceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e 579 (839)
++..++||+|.||.||+|+ ..+|+.||+|++.... .....-..+|+.+|++|+||||++|.+...+. ..+|||+|
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe 198 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE 198 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence 3345689999999999995 5789999999986443 33345678999999999999999999998776 68999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
||++ +|.-++. .....|+..++..++.|++.||.|+|.. +|+|||||.+|||||.+|.+||+|||||+++..
T Consensus 199 YMdh-DL~GLl~----~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 199 YMDH-DLSGLLS----SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred cccc-hhhhhhc----CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9987 7777663 3456899999999999999999999995 999999999999999999999999999999988
Q ss_pred CCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc----------cchhhhhhhhc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF----------FYPGWAFKEMT 728 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~----------~~~~~~~~~~~ 728 (839)
......+..+-|..|.|||++.+ ..|+.+.|+||.||||.||+.|++.|.+..+.+.. .-..|....+.
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 77776777788999999999987 47999999999999999999999999776543211 11123321221
Q ss_pred cCc---ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 729 NGT---PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 729 ~~~---~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.-. ...-....+.+. -.......++++..+|..||.+|.|+.++++-
T Consensus 351 ~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 100 011111122111 11123345667777899999999999998763
No 21
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2e-38 Score=306.67 Aligned_cols=262 Identities=23% Similarity=0.312 Sum_probs=202.9
Q ss_pred hccccccccCCCceEEEEE-eCCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.-.++||+|.||.||+|+ ..+|+.||||+++... ..-.....+|++.|+.++|+||+.+++++...+..-||+|||
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm 83 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM 83 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence 4445789999999999995 4679999999996432 122456899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+. +|+..|. .+...|....+..++.++++||+|||+ +.|+||||||.|+||+.+|.+||+|||+|+.+....
T Consensus 84 ~t-dLe~vIk----d~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 84 PT-DLEVVIK----DKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred cc-cHHHHhc----ccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 75 8988884 456788999999999999999999999 499999999999999999999999999999987655
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh-----hhhccC-----
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-----KEMTNG----- 730 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~-----~~~~~~----- 730 (839)
...... +-|..|.|||.+.+ +.|+...||||.|||+.||+-|.+-|.+..+.+.......+. +.|.+-
T Consensus 156 ~~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 156 RIQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred cccccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 544333 57899999998876 679999999999999999999987776655443221111111 011100
Q ss_pred -cccc-cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 731 -TPLK-VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 731 -~~~~-~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.... .-.+.+.. .-......+++++..++..+|.+|.+++|++++
T Consensus 235 Y~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0000 00111111 122334456888889999999999999999876
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=337.78 Aligned_cols=245 Identities=25% Similarity=0.373 Sum_probs=203.0
Q ss_pred ccccccCCCceEEEE-EeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 508 AQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
-++||+|+.|.||.+ +..+++.||||++........+-+.+|+.+|...+|+|||.++..+...+++++|||||++|+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 358999999999999 4567899999999776555556688999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+.+ ....+++.++..|+.++++||+|||.. +|||||||..|||++.+|.+||+|||++..+....... .
T Consensus 358 TDvV------t~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR-~ 427 (550)
T KOG0578|consen 358 TDVV------TKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR-S 427 (550)
T ss_pred hhhh------hcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc-c
Confidence 9988 345699999999999999999999995 99999999999999999999999999999876655433 4
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
..+||+.|||||++....|..|.||||||++++||+-|.+||-...... +...+...-. + .-....
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-------AlyLIa~ng~-----P--~lk~~~ 493 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGT-----P--KLKNPE 493 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-------HHHHHhhcCC-----C--CcCCcc
Confidence 4569999999999999999999999999999999999999995432211 1111111100 1 111223
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.....+.++..+||+.|+++||++.|+++.
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 344557778888999999999999999763
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=323.88 Aligned_cols=262 Identities=21% Similarity=0.298 Sum_probs=204.1
Q ss_pred HHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
...|++..+||.|..++||+|.. +.++.||||++.-.. ....+.+++|+..|..++||||++++..|..+..+++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 34577888999999999999965 678999999995432 2335789999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
||.+||+.+.+... -...+++..+..|+.++++||.|||++ +.||||||+.||||+.+|.+||+|||.+-.+..
T Consensus 105 fMa~GS~ldIik~~---~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTY---YPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhcCCcHHHHHHHH---ccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999654 234589999999999999999999995 999999999999999999999999998876544
Q ss_pred CCcee---EEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 660 EHSQV---VTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 660 ~~~~~---~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
..... .....||+.|||||++.. ..|+.|+||||||+...||.+|..||......+. ....+ .+.+..
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tL-qn~pp~ 251 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTL-QNDPPT 251 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHh-cCCCCC
Confidence 33222 145689999999999643 5799999999999999999999999964322110 00111 111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..-..+..+-.......+.+++..|++.||.+|||++++++.
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 111111111112223367778888999999999999999864
No 24
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.2e-37 Score=384.17 Aligned_cols=268 Identities=25% Similarity=0.466 Sum_probs=212.6
Q ss_pred cchHHHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 495 FTYRDLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 495 ~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
+++.++... ....++||+|+||.||+|.. .++..||||++..... ....|++.+++++|||||+++|+|.+...
T Consensus 683 ~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~ 757 (968)
T PLN00113 683 ITINDILSS-LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKG 757 (968)
T ss_pred hhHHHHHhh-CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCC
Confidence 444554432 34456899999999999986 5789999999865422 22356888999999999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++|+|.+++. .++|..+.+|+.|||+||+|||+++.++|+||||||+||+++.++.+++. ||.
T Consensus 758 ~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 999999999999999983 37899999999999999999997767899999999999999999988876 666
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
+...... ....+++.|||||++.+..++.++|||||||++|||++|+.|++..... ......|+..........
T Consensus 829 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 902 (968)
T PLN00113 829 PGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLD 902 (968)
T ss_pred ccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCccchh
Confidence 5433221 1225789999999999999999999999999999999999999643322 223444544433333344
Q ss_pred ccccccccC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 734 KVADRRLEG--AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 734 ~~~~~~l~~--~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
..+|+.+.. ....++...+.+++.+||+.+|++||+|.||+++|+....
T Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred heeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 455665533 3455777889999999999999999999999999987643
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2e-38 Score=347.51 Aligned_cols=261 Identities=26% Similarity=0.428 Sum_probs=200.7
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCC-cchHHHHHHHHHhhcc-ccCCcccccceeecCC-
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGS- 572 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~- 572 (839)
...+.+.++||+|+||.||+|.. .+++.||||++..... .....+.+|+.++.++ +||||++++++|....
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 34567788999999999999964 2356899999965432 2345689999999999 8999999999887644
Q ss_pred ceEEEEeeccCCChhhhcccCCCC--------------------------------------------------------
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHH-------------------------------------------------------- 596 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 596 (839)
..++||||+++|+|.++|......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 578999999999999998532100
Q ss_pred -CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee-EEeeccccce
Q 038743 597 -RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGY 674 (839)
Q Consensus 597 -~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y 674 (839)
....+++..++.++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++......... .....++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 023478888999999999999999994 99999999999999999999999999998653322211 2233467889
Q ss_pred eCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHH
Q 038743 675 LAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAM 753 (839)
Q Consensus 675 ~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 753 (839)
+|||++.+..++.++||||||+++|||++ |+.||......+. ....+..+.. .. .+......+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~-----~~----~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE------FCQRLKDGTR-----MR----APENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH------HHHHHhcCCC-----CC----CCCCCCHHHH
Confidence 99999999999999999999999999997 9999864332110 1111111111 01 1112234578
Q ss_pred HHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 754 KVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 754 ~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+++.+||+.+|++||+|.+|+++|+..
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 899999999999999999999999864
No 26
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=336.19 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=204.5
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+.|.+.||.|+|++|++|+. ..++.+|||++.+... ...+-...|-.+|.+| .||.|++|+-.|.++..+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 456889999999999999954 5799999999976532 2234567888899999 8999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++|+|.++|. +-..|++.....++.+|+.||+|||+. +||||||||+|||||++|++||+|||-|+.+.
T Consensus 154 e~A~nGdll~~i~-----K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 154 EYAPNGDLLDLIK-----KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EecCCCcHHHHHH-----HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999994 457899999999999999999999995 99999999999999999999999999999886
Q ss_pred CCCce---------e---EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhh
Q 038743 659 REHSQ---------V---VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 659 ~~~~~---------~---~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
..... . ....+||..|.+||++.....+..+|+|+||||||.|+.|++||....+.. .+++
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-------iFqk 298 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-------IFQK 298 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH-------HHHH
Confidence 43222 1 134789999999999999999999999999999999999999997544321 1121
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+. -++- ++++...+.+.+++.+.|..||.+|+|..++.+.
T Consensus 299 I~------~l~y----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQ------ALDY----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HH------Hhcc----cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11 1122 2233333556677777899999999999888775
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-38 Score=333.71 Aligned_cols=245 Identities=18% Similarity=0.284 Sum_probs=196.5
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcc---hHHHHHHHHHhhccccCCcccccceeec----CCceEEEEeec
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG---EKEFVTEVNTIGSMHHMNLVRLCGYCSE----GSNRLLVYEFM 581 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lv~e~~ 581 (839)
..||+|++|.||+|.+ +|+.||||+++...... .+.+.+|+.++.+++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 78999999997653333 3567899999999999999999999876 45678999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++|+|.+++. ....+++...+.++.+++.||.|||+. .+++||||||+|||+++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~-----~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 105 TRGYLREVLD-----KEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCcHHHHHh-----hCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 9999999994 335688999999999999999999973 378899999999999999999999999998654322
Q ss_pred ceeEEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+..+.
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-------~~~i~~~~-------- 238 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-------YDLIINKN-------- 238 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhcC--------
Confidence 12357889999999976 6899999999999999999999999974322110 11110000
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+......+.+++.+||+.+|++||+|.+|++.|+..
T Consensus 239 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 239 NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 01111112344577888899999999999999999999754
No 28
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=336.68 Aligned_cols=266 Identities=24% Similarity=0.350 Sum_probs=223.6
Q ss_pred CcccchHHHHHHhhccccccccCCCceEEEEEeCC-CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeec
Q 038743 492 PVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE 570 (839)
Q Consensus 492 ~~~~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 570 (839)
.+...-.|+........++||-|.||.||.|.++. .-.||||.++.. .-...+|+.|+.+|+.++|||+|+|+|+|..
T Consensus 256 SPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~ 334 (1157)
T KOG4278|consen 256 SPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH 334 (1157)
T ss_pred cCCcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence 33446677777777788899999999999999865 568999999765 3456799999999999999999999999999
Q ss_pred CCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecc
Q 038743 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSD 650 (839)
Q Consensus 571 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~D 650 (839)
+...|||.|||.+|+|.+||... .+..+.-..++.+|.||+.||.||.. +.+|||||.++|+|+.++..+||+|
T Consensus 335 EpPFYIiTEfM~yGNLLdYLRec---nr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvAD 408 (1157)
T KOG4278|consen 335 EPPFYIITEFMCYGNLLDYLREC---NRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVAD 408 (1157)
T ss_pred CCCeEEEEecccCccHHHHHHHh---chhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeec
Confidence 99999999999999999999644 44566777889999999999999998 5999999999999999999999999
Q ss_pred cCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 651 FGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 651 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
|||++++..+.........-.+.|.|||-+....++.|+|||+|||+||||.| |..|+-+..-.
T Consensus 409 FGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------------- 473 (1157)
T KOG4278|consen 409 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------- 473 (1157)
T ss_pred cchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH---------------
Confidence 99999997766655554556788999999999999999999999999999985 77776432211
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...+++....+.+-+..+...+.+++..||+.+|.+||++.|+-+.|+.+
T Consensus 474 -qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 474 -QVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred -HHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 11234444445555666778889999999999999999999999988754
No 29
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=331.33 Aligned_cols=264 Identities=24% Similarity=0.331 Sum_probs=204.7
Q ss_pred HhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCcch-HHHHHHHHHhhccc-cCCcccccceeecCC-ceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGE-KEFVTEVNTIGSMH-HMNLVRLCGYCSEGS-NRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~g~~~~~~-~~~lv~ 578 (839)
..|...++||.|.||.||+|+ ..+|+.||||++++.....+ --=++|++.|.+|+ ||||++|..++.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 456677899999999999995 46789999999977644322 22468999999998 999999999998888 999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
|||+. +|.+++. .+++.|++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+||...
T Consensus 90 E~Md~-NLYqLmK----~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 90 EFMDC-NLYQLMK----DRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred Hhhhh-hHHHHHh----hcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 99965 8888884 3578999999999999999999999995 99999999999999999999999999999764
Q ss_pred CCCceeEEeeccccceeCccccc-CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh-----hhhccC-c
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVS-NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-----KEMTNG-T 731 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~-----~~~~~~-~ 731 (839)
.. ...+..+.|+.|.|||++. ...|+.+.||||+|||++||.+-++.|-+..+.+...-...+. +.+.++ .
T Consensus 162 Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 162 SK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cC--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 32 3356677899999999775 5789999999999999999999998886655432211111111 111111 0
Q ss_pred ccccccccccC-------CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEG-------AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~-------~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+...+.-++.. ..-......+++++..|+..||.+|||+++.+++
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00011111100 0112356678899999999999999999999986
No 30
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.9e-37 Score=343.60 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=201.8
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
...+.+.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++..+ +||||++++++|.++..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 44567789999999999999963 346689999996432 23345688999999999 89999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCC----------------------------------------------------------
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYH---------------------------------------------------------- 595 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 595 (839)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998853210
Q ss_pred ------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 596 ------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 596 ------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
.....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 0123578899999999999999999984 9999999999999999999999999999876443222
Q ss_pred e-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 664 V-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 664 ~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. .....++..|+|||.+.+..++.++||||||+++|||++ |..||........ ..+.+..+. .
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~------~~~~~~~~~---------~ 335 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK------FYKMIKEGY---------R 335 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH------HHHHHHhCc---------c
Confidence 1 122345678999999999999999999999999999998 8888854321110 011111111 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...+......+.+++.+||+.+|++||+|.+|+++|+..
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 001111234577888999999999999999999999853
No 31
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2e-37 Score=327.63 Aligned_cols=257 Identities=23% Similarity=0.366 Sum_probs=202.6
Q ss_pred HHHhhccccccccCCCceEEEEEeC----CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
....+.+.+.||+|+||.||+|.+. .+..||+|.++.... .....+.+|+.++.+++||||+++++++..+...+
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 4456778899999999999999753 367899999875432 23456899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +++||||||+|||++.++.+||+|||.+.
T Consensus 83 lv~e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 83 IVTEYMSNGALDSFLRK----HEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred EEEEeCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 99999999999999842 234688999999999999999999985 99999999999999999999999999876
Q ss_pred ecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
..............++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ ..+...++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~--- 225 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-------VIKAVEDGF--- 225 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCC---
Confidence 542222111122335678999999999999999999999999999775 999986432211 011111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
....+......+.+++..||+.+|.+||++.++.+.|...
T Consensus 226 ------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 ------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0111222345678888999999999999999999998653
No 32
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.6e-38 Score=328.97 Aligned_cols=245 Identities=27% Similarity=0.379 Sum_probs=202.9
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||+||||+- .+.+.||+|.+.+..+ ...+.+.+|++++++++|||||.+++.++...+.++|.||+
T Consensus 4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a 83 (808)
T KOG0597|consen 4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYA 83 (808)
T ss_pred hhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhh
Confidence 45667899999999999965 4689999999976533 23456899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
.+ +|..+| ..+..+.+..+..|+.+++.||.|||+ ++|+|||+||+||||+..+.+|++|||+|+.+.. .
T Consensus 84 ~g-~L~~il-----~~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~ 153 (808)
T KOG0597|consen 84 VG-DLFTIL-----EQDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-N 153 (808)
T ss_pred hh-hHHHHH-----HhccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc-C
Confidence 87 999999 466789999999999999999999999 5999999999999999999999999999998764 3
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
....+.+.||+.|||||+..+++|+..+|+||+||||||+.+|++||-...-. . ..+.+.. |+.
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~------~-Lv~~I~~-------d~v-- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT------Q-LVKSILK-------DPV-- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH------H-HHHHHhc-------CCC--
Confidence 34456778999999999999999999999999999999999999999522110 0 0011111 111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+......+..++...++.||.+|-+..+++..
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1122445567777778899999999999998754
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-36 Score=327.89 Aligned_cols=266 Identities=22% Similarity=0.316 Sum_probs=199.9
Q ss_pred HHhhccccccccCCCceEEEEEeCC-----------------CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCccc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGD-----------------GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVR 563 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 563 (839)
...+.+.++||+|+||.||++...+ +..||+|.+..... ....+|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3456678899999999999997532 34799999865432 23457999999999999999999
Q ss_pred ccceeecCCceEEEEeeccCCChhhhcccCCC--------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeee
Q 038743 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYH--------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRII 629 (839)
Q Consensus 564 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 629 (839)
+++++.+....++||||+++|+|.+++..... .....+++..+++++.||+.||+|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 99999999999999999999999998843211 1123578889999999999999999995 899
Q ss_pred ecCCCCCcEEECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh--CCC
Q 038743 630 HCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG--GRR 706 (839)
Q Consensus 630 H~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt--G~~ 706 (839)
||||||+|||+++++.+||+|||+++......... .....++..|+|||++....++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999998654332221 223345788999999998899999999999999999987 455
Q ss_pred CCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 707 NLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 707 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
||....... ........+..... .. ....+......+.+++.+||+.+|++||+|.+|.+.|++
T Consensus 241 p~~~~~~~~---~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTDEQ---VIENAGEFFRDQGR-QV-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCHHH---HHHHHHHHhhhccc-cc-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 665322111 11111111110000 00 000111233567889999999999999999999999863
No 34
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.4e-37 Score=340.39 Aligned_cols=263 Identities=24% Similarity=0.392 Sum_probs=202.3
Q ss_pred HHHHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCCc-chHHHHHHHHHhhcc-ccCCcccccceeecC
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG 571 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 571 (839)
+....+.+.+.||+|+||.||++.. .++..||||++...... ....+.+|+++++.+ +|+||++++++|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 3445677889999999999999863 23458999999754322 235688999999999 899999999999999
Q ss_pred CceEEEEeeccCCChhhhcccCCC--------------------------------------------------------
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYH-------------------------------------------------------- 595 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 595 (839)
...++||||+++|+|.+++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999998853210
Q ss_pred ---------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee-E
Q 038743 596 ---------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-V 665 (839)
Q Consensus 596 ---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~ 665 (839)
.....+++.++++++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......... .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 0123578888999999999999999994 99999999999999999999999999998654332221 1
Q ss_pred EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 666 TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
....++..|||||++.+..++.++||||||+++|||++ |+.||........ .......+ .....
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~------~~~~~~~~---------~~~~~ 336 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK------FYKMVKRG---------YQMSR 336 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH------HHHHHHcc---------cCccC
Confidence 22345678999999999999999999999999999997 9999864322111 00111111 00001
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+......+.+++.+||+.+|++||++.+|+++|++.
T Consensus 337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111234577888899999999999999999999764
No 35
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=331.93 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=202.2
Q ss_pred HHHhhccccccccCCCceEEEEEe-CCCcEEEEEEeccc----CC-cchHHHHHHHHHhhccc-cCCcccccceeecCCc
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRV----LP-HGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSN 573 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~ 573 (839)
....|.+.+.||+|+||+|++|.. .+++.||+|++.+. .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 345677889999999999999965 56899999977553 11 23445678999999998 9999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC-CceeecccC
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFG 652 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~-~~~kl~DfG 652 (839)
.++||||+.+|+|.+++. ....+.+.+...++.|++.|++|||+. +|+||||||+|||+|.+ +++||+|||
T Consensus 95 ~~ivmEy~~gGdL~~~i~-----~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIV-----NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EEEEEEecCCccHHHHHH-----HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 999999999999999994 346788899999999999999999995 99999999999999999 999999999
Q ss_pred cceecCCCCceeEEeeccccceeCcccccCCC-CC-CcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRP-IT-VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 653 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
++.... ..........||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...... ....+..+
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-------l~~ki~~~ 238 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-------LYRKIRKG 238 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-------HHHHHhcC
Confidence 999874 2223455678999999999999977 85 89999999999999999999998532111 11111111
Q ss_pred cccccccccccCCCCHHH-HHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TPLKVADRRLEGAVEEEE-LMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~-~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
. + .++.-. ...+..++.+|++.+|.+|+++.++++
T Consensus 239 ~--------~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 239 E--------F--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred C--------c--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 1 0 111111 456778888999999999999999983
No 36
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-36 Score=320.45 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=206.5
Q ss_pred HHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
+....+.+.+.||+|++|.||+|...+++.||+|.++.. ....+++.+|+.++++++||||+++++++......++|||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 344567788999999999999999878889999998654 2345679999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 82 LMKYGSLLEYLQGG---AGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred cccCCcHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999998432 245689999999999999999999984 999999999999999999999999999987653
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
...........+..|+|||++.+..++.++||||||+++|||++ |+.||....... ........
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~-------- 220 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-------VLQQVDQG-------- 220 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcC--------
Confidence 22221122223467999999999999999999999999999999 999886432111 11111111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.....+......+.+++.+|++.+|.+||+|.++++.|++
T Consensus 221 -~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 221 -YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0001112234568889999999999999999999999975
No 37
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-36 Score=320.42 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=204.7
Q ss_pred HHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
...+.+.++||+|+||.||+|...+++.||+|.+... ....+.+.+|+.++++++|+||+++++.+.+....+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3456678899999999999999888899999998653 233567899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 84 AKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999998532 345678889999999999999999984 99999999999999999999999999998765433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
........++..|+|||++....++.++||||||+++|||++ |+.||....... ....+.... ..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~-----~~-- 223 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-------VMSALQRGY-----RM-- 223 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCC-----CC--
Confidence 222223345678999999998889999999999999999998 999986432111 111111110 00
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.........+.+++.+|++.+|++||+++++.++|+.
T Consensus 224 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 --PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111123457889999999999999999999999975
No 38
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.6e-36 Score=318.70 Aligned_cols=251 Identities=24% Similarity=0.417 Sum_probs=201.2
Q ss_pred hhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.+.+.||+|+||.||++...++..+|+|.+... .....++..|+.++++++||||+++++++.+....++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 45667899999999999999988889999988643 33456789999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 84 ~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 84 GCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 9999988432 23588999999999999999999984 9999999999999999999999999999865433222
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+..+.. ...+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-------~~~~i~~~~~--~~~~---- 223 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-------VVEMISRGFR--LYRP---- 223 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCCCC--CCCC----
Confidence 2223345678999999998889999999999999999999 899986432211 1111111110 0011
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
......+.+++.+||+.+|++||+|.++++.|.
T Consensus 224 ---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 224 ---KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 112345789999999999999999999999873
No 39
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.6e-37 Score=326.78 Aligned_cols=249 Identities=32% Similarity=0.525 Sum_probs=191.9
Q ss_pred cccccccCCCceEEEEEeC-----CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 507 FAQLLGTGGFGSVYKGSLG-----DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.||.|.||.||+|.+. .+..|+||.++..... ..++|.+|++.+.+++||||++++|++......++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4678999999999999875 2578999999654332 367899999999999999999999999988889999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.++|... ....+++.+++.|+.||++||.|||+. +++|+||+++|||+++++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999999999543 346789999999999999999999995 8999999999999999999999999999877322
Q ss_pred Cce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 661 HSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 661 ~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
... ..........|+|||.+....++.++||||||+++|||++ |+.|+......+ ....+.++..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-------~~~~~~~~~~------ 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-------IIEKLKQGQR------ 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-------HHHHHHTTEE------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccc------
Confidence 222 2223457789999999999989999999999999999999 678875331110 1111111111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
...+......+.+++..||+.+|++||+|.++++.|
T Consensus 224 ---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111222344577888899999999999999999876
No 40
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=313.95 Aligned_cols=275 Identities=23% Similarity=0.372 Sum_probs=208.6
Q ss_pred cchHHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhc--cccCCcccccceeecCC
Q 038743 495 FTYRDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGS--MHHMNLVRLCGYCSEGS 572 (839)
Q Consensus 495 ~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~ 572 (839)
+-.+.....+..+.+.||+|.||+||+|++ -|+.||||++.. .+++.+.+|.++++. |+|+||+.+++.-....
T Consensus 203 lLVQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 203 LLVQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred hHhHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 344445556667788999999999999999 689999999963 456779999999887 49999999998765443
Q ss_pred ----ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhh-----ccCCeeeecCCCCCcEEECCC
Q 038743 573 ----NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE-----QCRNRIIHCDIKPENILLDEN 643 (839)
Q Consensus 573 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-----~~~~~iiH~dlk~~Nill~~~ 643 (839)
.++||.+|.++|||.+|| ....++-...++++..+|.||++||- +.++.|.|||||+.|||+..+
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL------~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYL------NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred CceEEEEEeeecccCCcHHHHH------hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 678999999999999999 44689999999999999999999996 457889999999999999999
Q ss_pred CceeecccCcceecCCCCcee---EEeeccccceeCcccccCC----CC--CCcccEEehhHHHHHHHhCCCCCCCCCCC
Q 038743 644 FCPKVSDFGLAKLMGREHSQV---VTMVRGTRGYLAPEWVSNR----PI--TVKADVYSYGMLLLEIVGGRRNLDMSGDA 714 (839)
Q Consensus 644 ~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~----~~--s~~~DV~S~Gvvl~elltG~~p~~~~~~~ 714 (839)
+.+.|+|+|||-......... ....+||.+|||||++... .+ -..+||||||.|+||+...-.- .+-.
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~---ggi~ 429 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCES---GGIV 429 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhc---CCEe
Confidence 999999999998765543322 3456799999999998642 22 2469999999999999854311 1111
Q ss_pred CCccchhhhh--hhhccCcccc-cccccccCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 715 EDFFYPGWAF--KEMTNGTPLK-VADRRLEGAV-----EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 715 ~~~~~~~~~~--~~~~~~~~~~-~~~~~l~~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
+.+.+|.+.+ ....-+.+.+ +-..++++.+ +.+.+..+.+++..||..+|..|-|+-.+.+.|.+..+
T Consensus 430 eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 430 EEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred hhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 2222222111 1111111111 2233344333 34788999999999999999999999999999877654
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=319.02 Aligned_cols=244 Identities=24% Similarity=0.343 Sum_probs=202.1
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCC
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
.+.||+|.||.||||.. ..++.||+|++.-.. .....+.+.|+.++.+++|+||.+++|.+..+..+.++||||.+|+
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGs 97 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGS 97 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcc
Confidence 46899999999999965 568999999996543 3334678899999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeE
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV 665 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 665 (839)
+.+.|. .+..+++..+.-|+.++..||.|||.+ +.+|||||+.|||+..+|.+||+|||++-.+.......
T Consensus 98 v~~lL~-----~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr- 168 (467)
T KOG0201|consen 98 VLDLLK-----SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR- 168 (467)
T ss_pred hhhhhc-----cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence 999983 445568888889999999999999996 89999999999999999999999999998876655444
Q ss_pred EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCC
Q 038743 666 TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVE 745 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 745 (839)
...+||+.|||||++....|+.|+||||||++.+||.+|.+|+....... ..-++.+.-.+...
T Consensus 169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------------vlflIpk~~PP~L~ 232 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------------VLFLIPKSAPPRLD 232 (467)
T ss_pred ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------EEEeccCCCCCccc
Confidence 56779999999999998899999999999999999999999986443211 11111111112222
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 746 EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 746 ~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
......+.+++..|+..+|+.||++.++++.
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 2334457778888999999999999999875
No 42
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-37 Score=299.60 Aligned_cols=196 Identities=29% Similarity=0.392 Sum_probs=175.2
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+++.+.||.|+||+|.+++.+ +|..+|+|++++..-- ..+...+|.++|+.+.||+++++++.+.+.+..+|||||
T Consensus 46 fe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmey 125 (355)
T KOG0616|consen 46 FERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEY 125 (355)
T ss_pred hhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEec
Confidence 355789999999999999764 5889999999764322 234577899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
.+||.|..+|. +.+.+++....-+|.+|+.||+|||+. .|++|||||+|||||.+|.+||+|||+|+.....
T Consensus 126 v~GGElFS~Lr-----k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 126 VPGGELFSYLR-----KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred cCCccHHHHHH-----hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999994 456899999999999999999999994 9999999999999999999999999999976432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
..+.+||+.|+|||.++..++..++|.|||||++|||+.|..||....
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 556789999999999999999999999999999999999999996443
No 43
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-37 Score=328.82 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=202.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+-|.|.+|++ .+|+.+|||++.+... .....+.+|+.+|+.+.|||++++++++++..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 56788999999999999976 6799999999976532 2234578999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|.|.++|. +...|.+.+..+++.||+.|+.|+|.. +|+||||||+|+|||.++.+||+|||||.+-.
T Consensus 94 v~gGELFdylv-----~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-- 163 (786)
T KOG0588|consen 94 VPGGELFDYLV-----RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-- 163 (786)
T ss_pred cCCchhHHHHH-----hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc--
Confidence 99999999994 557889999999999999999999996 99999999999999999999999999998632
Q ss_pred CceeEEeeccccceeCcccccCCCC-CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
........+|.+.|.|||++.+.+| ..++||||.||||+.||+|+.||+...-. -...++..|..
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-------~LLlKV~~G~f------- 229 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-------VLLLKVQRGVF------- 229 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-------HHHHHHHcCcc-------
Confidence 2334556789999999999999998 57999999999999999999999833211 01112222211
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+.+......+.+++.+|+..||.+|-|++||++.
T Consensus 230 ---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 ---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1122333446677778999999999999999986
No 44
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=316.02 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=200.1
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--------------cchHHHHHHHHHhhccccCCcccccce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--------------HGEKEFVTEVNTIGSMHHMNLVRLCGY 567 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~g~ 567 (839)
-+|.+.+.||+|.||.|-+|.. .+++.||||++.+... ...+...+|+.+|++++|||||+|+.+
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv 176 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV 176 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence 4566778999999999999965 5799999999964311 012467899999999999999999999
Q ss_pred eec--CCceEEEEeeccCCChhhhcccCCCCCccc-CChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC
Q 038743 568 CSE--GSNRLLVYEFMKNGSLDKWIFPSYHHRDRV-LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF 644 (839)
Q Consensus 568 ~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~ 644 (839)
..+ .+..|||+|||..|.+...= .... |+..+.++++.+++.||+|||.+ +||||||||+|+||+++|
T Consensus 177 LDDP~s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 177 LDDPESDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred ecCcccCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 865 46899999999999875422 3344 99999999999999999999998 999999999999999999
Q ss_pred ceeecccCcceecCCCCc----eeEEeeccccceeCcccccCCC----CCCcccEEehhHHHHHHHhCCCCCCCCCCCCC
Q 038743 645 CPKVSDFGLAKLMGREHS----QVVTMVRGTRGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716 (839)
Q Consensus 645 ~~kl~DfGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~ 716 (839)
++||+|||.+..+..... .......||+.|||||...++. .+.+.||||+||+||.|+.|+.||......+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 999999999987622111 1123367999999999987733 35789999999999999999999964332111
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+ ..++...+.....++.-+.+.+++.++|+.||++|-+..+|.....-.
T Consensus 328 -------~--------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 328 -------F--------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred -------H--------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 1 123333333333445667788899999999999999999998876543
No 45
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.7e-36 Score=322.33 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=196.8
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+...+.||+|+||.||++.. .+++.||||.+.... ......+.+|++++.+++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 44567899999999999976 578999999986432 22234578999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|..++... ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++......
T Consensus 82 ~~~g~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 82 MNGGDLKFHIYNM---GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred cCCCcHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 9999998887432 234688999999999999999999994 9999999999999999999999999999875332
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ..........
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~~~~~~---------- 220 (285)
T cd05631 156 E--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR---EEVDRRVKED---------- 220 (285)
T ss_pred C--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH---HHHHHHhhcc----------
Confidence 1 223446899999999999999999999999999999999999999754321100 0000001000
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPS-----MGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~ 775 (839)
....+......+.+++.+||+.+|.+||+ ++++++
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01112223345678888899999999997 777765
No 46
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3e-36 Score=318.06 Aligned_cols=256 Identities=25% Similarity=0.387 Sum_probs=203.8
Q ss_pred HHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
...+.+.+.||+|+||.||+|... .++.||+|.+... .....++.+|++++.+++|+||+++++++......+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 345667889999999999999764 5889999998654 33456789999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++..++.++.|+++||+|||+. +++||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~L~~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 84 MTYGNLLDYLREC---NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred CCCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999998432 234688999999999999999999984 9999999999999999999999999999876443
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.........++..|+|||.+.+..++.++||||||+++|||++ |..|+......+ ....+...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~--------- 221 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKG--------- 221 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHCC---------
Confidence 2222222234668999999999999999999999999999998 888886432111 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+......+.+++.+|++.+|++||+|.+++++|+..
T Consensus 222 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01111122235577888999999999999999999999753
No 47
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.5e-36 Score=317.09 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=207.6
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.++||.|+||.||+|...+++.+|+|.+.........++..|+.+++.++|+||+++++++.+....++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 45667889999999999999988899999999976655456678999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++... ....+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||++........
T Consensus 86 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 86 KGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999542 345689999999999999999999984 899999999999999999999999999987643222
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. .....++..|+|||.+....++.++||||||++++||++ |+.||......+ ....... ...
T Consensus 160 ~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~---------~~~ 222 (261)
T cd05148 160 L-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-------VYDQITA---------GYR 222 (261)
T ss_pred c-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHHh---------CCc
Confidence 1 223346778999999998899999999999999999998 899986433211 0111111 011
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 11122334567899999999999999999999999975
No 48
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.2e-36 Score=316.50 Aligned_cols=252 Identities=24% Similarity=0.426 Sum_probs=201.8
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.+.||+|+||.||+|+..++..+|||.+... .....++.+|+.++.+++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 346678899999999999998877778999998644 2335679999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++... ...+++..++.++.||+.||+|||+. +++|+||||+|||++.++.+||+|||+++.......
T Consensus 83 ~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 83 NGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 99999998432 23689999999999999999999984 999999999999999999999999999986644322
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .......+..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 219 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-------TVEKVSQGLR--------- 219 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHhcCCC---------
Confidence 22222345678999999998889999999999999999998 999986432211 1111111110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
...+......+.+++.+||+.+|.+||++.++++.|+
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0011112456788999999999999999999998874
No 49
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=340.84 Aligned_cols=257 Identities=23% Similarity=0.251 Sum_probs=210.4
Q ss_pred hccccccccCCCceEEEEEeCCC-cEEEEEEecccCCcchHHHHHHHHHhhccc-cCCcccccce-eec------CCceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDG-TLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-HMNLVRLCGY-CSE------GSNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~-~~~------~~~~~ 575 (839)
..+.++|.+|||+.||.+....+ ..+|+|++-...+...+.+.+|+++|++|+ |+|||.+++. ... .-+.+
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 34578999999999999987665 999999997666777788999999999996 9999999993 221 24678
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
|.||||++|.|-++|.... ...|++.++++|+.|+++|+++||.. .++|||||||-+||||..++..||||||.|.
T Consensus 119 lLmEyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eehhhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 9999999999999996542 23499999999999999999999985 6789999999999999999999999999997
Q ss_pred ecCCCCcee--E------EeeccccceeCcccc---cCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh
Q 038743 656 LMGREHSQV--V------TMVRGTRGYLAPEWV---SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF 724 (839)
Q Consensus 656 ~~~~~~~~~--~------~~~~gt~~y~aPE~~---~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 724 (839)
..-...... . -...-|+.|.|||++ .+.++++|+|||+|||+||-|+....||+..+..
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---------- 264 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---------- 264 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------
Confidence 543222111 0 112368999999987 5788999999999999999999999999855432
Q ss_pred hhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCC
Q 038743 725 KEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADIN 784 (839)
Q Consensus 725 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~ 784 (839)
.|+.........+....++..||..||+++|.+||++-+|+..+..+...+
T Consensus 265 ---------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 ---------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 233444333334577888999999999999999999999999998776543
No 50
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.1e-36 Score=321.59 Aligned_cols=258 Identities=26% Similarity=0.441 Sum_probs=203.6
Q ss_pred HhhccccccccCCCceEEEEEeCC------CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGD------GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
..+.+.+.||+|+||.||+|.... ...||+|.+..... ....++.+|++++.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 355678899999999999997633 25799999864432 23456899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCC-----------cccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHR-----------DRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF 644 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~ 644 (839)
++|||+++|+|.+++....... ...+++..++.++.|++.||.|||+. +++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 9999999999999985432111 15688899999999999999999994 999999999999999999
Q ss_pred ceeecccCcceecCCCCc-eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhh
Q 038743 645 CPKVSDFGLAKLMGREHS-QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 645 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 722 (839)
.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE------- 234 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999986533222 12233456788999999998899999999999999999998 999986432211
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
....+..+. ....+......+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 235 ~~~~i~~~~---------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VIEMIRSRQ---------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCC---------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111111 111223345668889999999999999999999999974
No 51
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-36 Score=331.10 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=199.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+..|++++..++||||+++++++.+....++||||
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 82 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY 82 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence 567789999999999999875 58999999996532 22345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~-----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 83 VPGGDFRTLLN-----NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred CCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 99999999983 334688899999999999999999995 999999999999999999999999999986543
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...+.... ..+....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-------~~~i~~~~--~~~~~~~ 221 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-------WENLKYWK--ETLQRPV 221 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-------HHHHHhcc--ccccCCC
Confidence 22334689999999999999999999999999999999999999965432111 01110000 0000000
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...........+.+++.+|++.+|.+||++.++++.
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000001223456788888999999999999999875
No 52
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.9e-36 Score=335.15 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=201.5
Q ss_pred HHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCc-chHHHHHHHHHhhccc-cCCcccccceeecCCc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSN 573 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~ 573 (839)
...+.+.++||+|+||.||+|+.. .+..||||++...... ....+.+|++++.++. ||||+++++++.+...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 344567789999999999999752 2347999999654332 2356899999999995 9999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCC----------------------------------------------------------
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYH---------------------------------------------------------- 595 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 595 (839)
.+|||||+++|+|.++|.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999998854210
Q ss_pred ---------------------------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC
Q 038743 596 ---------------------------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE 642 (839)
Q Consensus 596 ---------------------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~ 642 (839)
.....+++..++.++.||++||+|||+. +|+||||||+|||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 0113477888899999999999999984 9999999999999999
Q ss_pred CCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccch
Q 038743 643 NFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYP 720 (839)
Q Consensus 643 ~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 720 (839)
++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~---- 348 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST---- 348 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----
Confidence 9999999999998654322211 222346788999999999999999999999999999997 8888864321110
Q ss_pred hhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 721 GWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.......+. ....+......+.+++.+||+.+|++||++.+|+++|+..
T Consensus 349 --~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 349 --FYNKIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred --HHHHHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 011111110 0111122345678899999999999999999999999864
No 53
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.7e-36 Score=318.98 Aligned_cols=259 Identities=26% Similarity=0.437 Sum_probs=205.0
Q ss_pred HHHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
...++.+.+.||+|+||.||+|... +++.||||.++..... ....+.+|++++.+++|+||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 3456778899999999999999763 3478999999765443 35679999999999999999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCC---------CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC
Q 038743 574 RLLVYEFMKNGSLDKWIFPSY---------HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF 644 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~ 644 (839)
.++||||+++++|.++|.... ......+++..+..++.||+.||+|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 999999999999999985431 12234578899999999999999999984 999999999999999999
Q ss_pred ceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhh
Q 038743 645 CPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 645 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 722 (839)
.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~------- 232 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE------- 232 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------
Confidence 9999999999865332211 1223345788999999999999999999999999999998 999986433211
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.......+... ..+......+.+++..||+.+|++||++.||++.|+
T Consensus 233 ~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 VIECITQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 01111111110 111123355788899999999999999999999986
No 54
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.1e-36 Score=314.98 Aligned_cols=251 Identities=24% Similarity=0.386 Sum_probs=200.3
Q ss_pred hhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.+.+.||+|+||.||++...++..+|+|.+... .....++.+|++++.+++||||+++++++.+....++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 35677899999999999998877788999998643 22345788999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++... ...+++..++.++.||+.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 84 ~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 84 GCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 9999998432 33688999999999999999999995 8999999999999999999999999999865432222
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ........ ..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-------~~~~~~~~---------~~ 220 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-------VESVSAGY---------RL 220 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-------HHHHHcCC---------cC
Confidence 1122224567999999999999999999999999999998 8888864332110 11111110 00
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
..+......+.+++.+||+.+|++||+|.+|++.|.
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 111123456888999999999999999999999873
No 55
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.9e-36 Score=318.96 Aligned_cols=243 Identities=21% Similarity=0.279 Sum_probs=192.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+++.++||+|+||.||+++. .+|..+|+|++++.... ..+..+.|-.+|....+|+||+|+..|.+.+.+||||||
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEy 222 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEY 222 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEe
Confidence 34567999999999999965 56999999999876433 345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC-
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR- 659 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~- 659 (839)
++||++..+|. +...|++......+.+++-|+.-||+. ++|||||||+|+|||..|++||+||||+.-+..
T Consensus 223 lPGGD~mTLL~-----~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 223 LPGGDMMTLLM-----RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred cCCccHHHHHH-----hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 99999999993 556888888888889999999999996 999999999999999999999999999953311
Q ss_pred ----------------------CCce----e-------------------EEeeccccceeCcccccCCCCCCcccEEeh
Q 038743 660 ----------------------EHSQ----V-------------------VTMVRGTRGYLAPEWVSNRPITVKADVYSY 694 (839)
Q Consensus 660 ----------------------~~~~----~-------------------~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~ 694 (839)
+... . ....+|||.|||||++.+..|+..+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0000 0 112469999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCC
Q 038743 695 GMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPS 769 (839)
Q Consensus 695 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt 769 (839)
|||+||||.|.+||......+. ++.+..-+ ..+..........+..++|.+|+. ||++|-.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T-------~rkI~nwr------~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQET-------YRKIVNWR------ETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHH-------HHHHHHHh------hhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 9999999999999976543321 12111100 001111111222567788888888 9999987
No 56
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=289.03 Aligned_cols=263 Identities=23% Similarity=0.266 Sum_probs=209.0
Q ss_pred HhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCC-----ceEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-----NRLL 576 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~l 576 (839)
..|.+.+.||+|||.-||+++ +.++..+|+|++.-...++.+..++|++..++++|||++++++++..+. +.||
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 456778899999999999996 5788999999997666677788999999999999999999999986543 4899
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
+++|...|+|.+.+... ..++..+++.+++.|+.+|.+||++||+. .++++||||||.|||+.+.+.++|.|||.+..
T Consensus 101 l~Pyy~~Gsl~d~i~~~-k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERL-KIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EeehhccccHHHHHHHH-hhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999998543 23556899999999999999999999995 23599999999999999999999999999976
Q ss_pred cCCCCcee--------EEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhh
Q 038743 657 MGREHSQV--------VTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFK 725 (839)
Q Consensus 657 ~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 725 (839)
..-.-... ...-.-|..|.|||.+. +..+++++|||||||+||+|+.|..||+......+.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS-------- 250 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS-------- 250 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe--------
Confidence 53211100 11234688899999885 456889999999999999999999999744321110
Q ss_pred hhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 726 EMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 726 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
-...+....+...-.....+.+.+++.+|++.||.+||++.+++..++..
T Consensus 251 -----laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 251 -----LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 00112222222222233667899999999999999999999999988754
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.3e-36 Score=326.45 Aligned_cols=199 Identities=25% Similarity=0.372 Sum_probs=172.2
Q ss_pred HHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
...+.+.+.||+|+||.||++... ++..||+|.+..... .....+.+|++++.+++||||+++++++......++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 345667789999999999999764 688999999865422 234568999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++. ....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 84 HMDGGSLDQVLK-----EAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred cCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 999999999984 234688899999999999999999984 3699999999999999999999999999976533
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 157 ~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 157 SM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 21 2234689999999999999999999999999999999999999964
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.4e-36 Score=326.52 Aligned_cols=242 Identities=22% Similarity=0.276 Sum_probs=193.7
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||++.. .+|+.||||+++... ......+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 568999999996532 223356788999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~-----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 151 (323)
T cd05571 81 ELFFHLS-----RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-AT 151 (323)
T ss_pred cHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Cc
Confidence 9999884 345788999999999999999999995 99999999999999999999999999997532221 12
Q ss_pred EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 665 VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+. .. +
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------~~~~~~~~~------~~----~ 214 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-------LFELILMEE------IR----F 214 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-------HHHHHHcCC------CC----C
Confidence 234569999999999999999999999999999999999999996432111 001111110 01 1
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
+......+.+++.+||+.+|++|| ++.++++.
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 112234567888899999999999 78888753
No 59
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.6e-36 Score=323.08 Aligned_cols=241 Identities=21% Similarity=0.262 Sum_probs=191.1
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||.||++... +++.||+|++.... ......+.+|+.++.+++||||+++++++.+....++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999764 58899999986432 23345688999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 151 (312)
T cd05585 81 FHHLQ-----REGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTN 151 (312)
T ss_pred HHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccc
Confidence 99984 334688999999999999999999995 99999999999999999999999999998643222 1223
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .......+.. ..+.
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~-------~~~~~~~~~~----------~~~~ 214 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE-------MYRKILQEPL----------RFPD 214 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH-------HHHHHHcCCC----------CCCC
Confidence 4568999999999999999999999999999999999999996432111 1111111100 1111
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.....+.+++.+||+.+|.+||++..+.+.|
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 2234567888899999999998654444444
No 60
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.1e-36 Score=320.65 Aligned_cols=263 Identities=19% Similarity=0.231 Sum_probs=198.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||.||+++.. +++.||||++.... ....+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV 82 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence 567789999999999999874 58899999986432 223456889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+++.|..+.. ....+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~l~~~~~-----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 83 EKNMLELLEE-----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred CCCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 9987765541 234688899999999999999999985 99999999999999999999999999998764433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc--------chhhhhhhhccC-cc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF--------YPGWAFKEMTNG-TP 732 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~--------~~~~~~~~~~~~-~~ 732 (839)
........|++.|+|||++.+..++.++|||||||++|||++|+.||.......... ++......+... ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 323334568999999999999899999999999999999999999997543211100 000000000000 00
Q ss_pred cccccccccC------CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 LKVADRRLEG------AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 ~~~~~~~l~~------~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.....+.... .........+.+++.+|++.+|++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 000112345888999999999999999999875
No 61
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-36 Score=325.55 Aligned_cols=244 Identities=25% Similarity=0.326 Sum_probs=198.2
Q ss_pred HHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCce
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 574 (839)
+......|.++||+|.||+|+++.+ .+++.+|||++++.. .+..+..+.|.+++... +||.|+.++.++...++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3344556789999999999999977 468899999998754 34455678898888877 599999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+.||++..+. ....+++....-++..|+.||+|||+ ++||+||||-+|||||.+|.+||+||||+
T Consensus 445 ~fvmey~~Ggdm~~~~------~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI------HTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred EEEEEecCCCcEEEEE------ecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccc
Confidence 9999999999954444 45689999999999999999999999 59999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
+..-.. ...+++..||+.|||||++.+..|+..+|.|||||+||||+.|..||.+.++.+.+ ..+.
T Consensus 516 Ke~m~~-g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F-------dsI~------ 581 (694)
T KOG0694|consen 516 KEGMGQ-GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF-------DSIV------ 581 (694)
T ss_pred cccCCC-CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------HHHh------
Confidence 864322 22466788999999999999999999999999999999999999999866544321 1110
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
.|.. .++.-...+.+.|+.+.+..+|++|..+
T Consensus 582 -~d~~---~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 582 -NDEV---RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -cCCC---CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 0111 1122233456677777899999999987
No 62
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.4e-35 Score=312.48 Aligned_cols=254 Identities=27% Similarity=0.427 Sum_probs=202.5
Q ss_pred HHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
...+.+.+.||+|+||.||++...++..||+|.+.... .....+.+|+.++.+++|+|++++++++. ....+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 34567788999999999999998888899999987543 23567999999999999999999999875 45689999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||++..+....
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 83 SKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999998532 234688999999999999999999994 89999999999999999999999999998764433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+ .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~---------~ 220 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERG---------Y 220 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcC---------C
Confidence 222222335678999999988899999999999999999999 888886432111 11111110 0
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
....+......+.+++.+|++.+|++|||+.++.+.|++
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111122334568889999999999999999999999874
No 63
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.4e-35 Score=312.84 Aligned_cols=254 Identities=28% Similarity=0.397 Sum_probs=202.7
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.++||+|+||.||+|...+...||+|+++.. ....+++.+|+.++.+++||||+++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 457788999999999999998877778999999753 2335678999999999999999999998754 56899999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++... ....+++..+..++.|+++||+|||+ ++++||||||+||++++++.+||+|||+++.+.....
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 84 KGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99999999432 23467899999999999999999998 4999999999999999999999999999987654332
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||......+ .......+. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------~~~~~~~~~---------~ 221 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQVERGY---------R 221 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-------HHHHHhcCC---------C
Confidence 22223346778999999998899999999999999999999 888885432111 011111100 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+....+.+++.+|++.+|++||++.+++++|++.
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 111223445678999999999999999999999999763
No 64
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.6e-35 Score=312.02 Aligned_cols=256 Identities=27% Similarity=0.441 Sum_probs=205.2
Q ss_pred HHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
+...++.+.++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+||+++++++. ....+++||
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 4456778889999999999999998889999999987542 33567899999999999999999999864 467899999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 81 YMENGSLVDFLKTP---EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred cCCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 99999999988532 345688999999999999999999984 999999999999999999999999999987653
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
..........++..|+|||++....++.++||||||+++|||++ |+.||......+ ....+..+.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~------- 220 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-------VIQNLERGY------- 220 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHHcCC-------
Confidence 33222223346778999999998889999999999999999999 999996433211 011111110
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...........+.+++.+|++.+|++||+++++++.|+.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 --RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001111223468889999999999999999999999874
No 65
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=324.15 Aligned_cols=245 Identities=23% Similarity=0.281 Sum_probs=196.7
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
..+.+.+.||+|+||.||+++.. +++.||||++.... ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45677889999999999999774 68899999986431 223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++|+|.+++. ....+++.....++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++...
T Consensus 98 e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 98 EFVVGGELFTHLR-----KAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred cCCCCChHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 9999999999984 334678888889999999999999995 99999999999999999999999999998764
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
... ....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.++..
T Consensus 170 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~~~i~~~~~------ 232 (329)
T PTZ00263 170 DRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-------IYEKILAGRL------ 232 (329)
T ss_pred CCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-------HHHHHhcCCc------
Confidence 322 23468999999999999999999999999999999999999996432110 1111111111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPS-----MGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~~ 776 (839)
..+......+.+++.+||+.+|.+||+ +++++..
T Consensus 233 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 ----KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011112234678888999999999996 5666543
No 66
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=329.86 Aligned_cols=250 Identities=26% Similarity=0.392 Sum_probs=205.0
Q ss_pred cccccccCCCceEEEEEe-CCCc----EEEEEEeccc-CCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 507 FAQLLGTGGFGSVYKGSL-GDGT----LVAVKKLDRV-LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
-.++||+|+||+||+|.+ ++|+ +||+|++... ..+...+++.|+-+|.+++||||++|+|+|.... ..||.+|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 356999999999999965 5544 7999998554 3455689999999999999999999999998766 8899999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
|+.|+|.+|+.. .+..+--...+.+..|||+||.|||++ +++||||.++|||+.+-..+||.|||+++.+..+
T Consensus 779 mP~G~LlDyvr~----hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE----HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred cccchHHHHHHH----hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 999999999953 455778889999999999999999996 9999999999999999999999999999988665
Q ss_pred CceeE-EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 661 HSQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 661 ~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
..... ....-.+.|||-|.+....|+.++|||||||.+||++| |..|++.....+.. +++..
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~----------------dlle~ 915 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP----------------DLLEK 915 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh----------------HHHhc
Confidence 54432 22334678999999999999999999999999999995 88898765433321 11111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+-.-++.....+..++.+||..|+..||+++++...+...
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 111223455667788999999999999999999999887654
No 67
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=319.95 Aligned_cols=257 Identities=24% Similarity=0.397 Sum_probs=213.5
Q ss_pred HHHHhhccccccccCCCceEEEEEeCC---Cc--EEEEEEeccc-CCcchHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD---GT--LVAVKKLDRV-LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
+..+...+.++||.|.||.||+|.+.+ |+ .||||..+.. .....+.|+.|..+|+.++||||++|+|+|.+ ..
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P 464 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QP 464 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cc
Confidence 444445567899999999999997632 33 6999999764 34556779999999999999999999999987 56
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++|||.++-|.|..||. .+...|+......++.||..+|+|||+ +.++||||.++|||+...-.+||+|||+
T Consensus 465 ~WivmEL~~~GELr~yLq----~nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQ----QNKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred eeEEEecccchhHHHHHH----hccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccch
Confidence 789999999999999994 345678889999999999999999999 5999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHH-hCCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV-GGRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
++.+..+.....+...-++.|||||.+..+.++.++|||-|||++|||+ .|..||.+-...+ .
T Consensus 538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------V 601 (974)
T KOG4257|consen 538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------V 601 (974)
T ss_pred hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------e
Confidence 9998877776666666788999999999999999999999999999998 5899997543221 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...+...-+...++.++..+..+..+||..+|.+||++.++...|..+
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 112222223345566777888999999999999999999998887543
No 68
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-35 Score=317.40 Aligned_cols=260 Identities=24% Similarity=0.383 Sum_probs=202.0
Q ss_pred HHHhhccccccccCCCceEEEEEe-----CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSL-----GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
....+.+.+.||+|+||.||+|.. ..+..||+|.+..... ....++.+|+.++++++||||+++++++..+...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 345567789999999999999974 3467899999975332 2335788999999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCC------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC
Q 038743 575 LLVYEFMKNGSLDKWIFPSYH------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE 642 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~ 642 (839)
++||||+++++|.+++..... .....+++.+.+.++.|++.||+|||+. +++||||||+|||+++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 999999999999999842210 0123578899999999999999999985 9999999999999999
Q ss_pred CCceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccch
Q 038743 643 NFCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYP 720 (839)
Q Consensus 643 ~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 720 (839)
++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~------ 233 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ------ 233 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 999999999999865432221 1223345678999999988889999999999999999998 88888543211
Q ss_pred hhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 721 GWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+....... ...+......+.+++.+|++.+|.+||++.+|.++|..
T Consensus 234 -~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 -EVIEMVRKRQL---------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 01111111111 01111223457788889999999999999999998863
No 69
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6e-36 Score=326.86 Aligned_cols=262 Identities=27% Similarity=0.413 Sum_probs=201.1
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCC-cchHHHHHHHHHhhcc-ccCCcccccceeec-CC
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSE-GS 572 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~ 572 (839)
...+.+.++||+|+||.||+|.. .+++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 34577889999999999999954 2357899999865432 2234678899999999 89999999998864 45
Q ss_pred ceEEEEeeccCCChhhhcccCCCC--------------------------------------------------------
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHH-------------------------------------------------------- 596 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 596 (839)
..+++|||+++++|.++|......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 688999999999999988532110
Q ss_pred CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee-EEeecccccee
Q 038743 597 RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYL 675 (839)
Q Consensus 597 ~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~ 675 (839)
....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+....... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 013688999999999999999999984 99999999999999999999999999998764322221 23345677899
Q ss_pred CcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHH
Q 038743 676 APEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMK 754 (839)
Q Consensus 676 aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 754 (839)
|||++.+..++.++|||||||++|||++ |+.||......+. .......+.. ...+......+.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~ 307 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE------FCRRLKEGTR---------MRAPEYATPEIYS 307 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH------HHHHHhccCC---------CCCCccCCHHHHH
Confidence 9999999999999999999999999997 9999864322111 0011111110 0111223456788
Q ss_pred HHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 755 VAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 755 l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
++.+||+.+|++||++.+|+++|+...
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999999998643
No 70
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.1e-36 Score=323.61 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=199.3
Q ss_pred HHHhhccccccccCCCceEEEEEeC-CCc----EEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG-DGT----LVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
....+...+.||+|+||.||+|.+. +++ .||+|.++... ....+++.+|+.+++.++||||++++|+|... ..
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 3445667789999999999999753 343 48999986543 23456789999999999999999999999764 57
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++++||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 84 ~~v~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 84 QLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred eeeeecCCCCCHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccc
Confidence 799999999999999843 234688899999999999999999995 9999999999999999999999999999
Q ss_pred eecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 655 KLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 655 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
+.+....... .....++..|+|||++.+..++.++||||||+++|||++ |+.||+.....+ . ......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~------~-~~~~~~~~- 228 (316)
T cd05108 157 KLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------I-SSILEKGE- 228 (316)
T ss_pred ccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH------H-HHHHhCCC-
Confidence 9765433222 122234678999999999999999999999999999997 999986432111 0 01111110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
....+......+.+++.+||+.+|++||++.+++..|....
T Consensus 229 --------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 229 --------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00011112345778889999999999999999999987543
No 71
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-36 Score=287.78 Aligned_cols=248 Identities=26% Similarity=0.353 Sum_probs=204.3
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
...++.+.||+|-||.||.|+.+ ++-.||+|++.+.. .+-..++.+|+++-..|+||||+++++++.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 34467899999999999999764 57799999996542 233567999999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||.+.|+|...|.+. ....+++.....++.|+|.||.|+|. +.+|||||||+|+|++.++..||+|||-+-.-.
T Consensus 102 Eya~~gel~k~L~~~---~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEG---RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EecCCchHHHHHHhc---ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 999999999999532 45678889999999999999999998 699999999999999999999999999987542
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
........||..|.+||+..+..++.+.|+|++|++.||++.|.+||+.....+.+ +++.. .++.+
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY-------krI~k---~~~~~- 241 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY-------KRIRK---VDLKF- 241 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH-------HHHHH---ccccC-
Confidence 23345567999999999999999999999999999999999999999755422211 11111 11111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+......+.+++..|+..+|.+|.+..||++.
T Consensus 242 ------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 ------PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ------CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 22334456788889999999999999999764
No 72
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.5e-35 Score=313.38 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=201.8
Q ss_pred HhhccccccccCCCceEEEEEeCC----CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
..+.+.+.||+|+||.||+|.... ...||||.++.... ....+|.+|+.++.+++||||+++++++.+....++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 345678899999999999997742 45899999865432 2345789999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+|+||||+|||+++++.+||+|||+++.+
T Consensus 84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 84 TEYMENGSLDKFLRE----NDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEcCCCCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999999843 234789999999999999999999984 9999999999999999999999999999977
Q ss_pred CCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 658 GREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 658 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+ .......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---- 225 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-------VIKAVEDGY---- 225 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCC----
Confidence 5222221 222345678999999999999999999999999999997 998885332111 011111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
....+......+.+++.+|++.+|++||++.+|+++|+..
T Consensus 226 -----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 -----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011112345678999999999999999999999999763
No 73
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-35 Score=318.73 Aligned_cols=262 Identities=26% Similarity=0.428 Sum_probs=206.3
Q ss_pred HHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
...+.+.+.||+|+||.||++... ++..+++|.+........+.+.+|+.++.+++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 344567789999999999999642 35679999987655445567999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC
Q 038743 576 LVYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF 644 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~ 644 (839)
+||||+++++|.+++..... .....+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 99999999999999853210 1224588999999999999999999984 999999999999999999
Q ss_pred ceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhh
Q 038743 645 CPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 645 ~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 722 (839)
.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------- 233 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------- 233 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 9999999999765432221 1223446788999999999999999999999999999998 999985432211
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
..+....+.... ........+.+++.+||+.+|++||++.+|+++|+....
T Consensus 234 ~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 234 VIECITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 111111111111 111233467889999999999999999999999987643
No 74
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-35 Score=323.13 Aligned_cols=202 Identities=25% Similarity=0.388 Sum_probs=173.5
Q ss_pred HHHHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
+....|.+.++||+|+||.||++... +++.+|+|.+..... .....+.+|++++.+++||||+++++++.+....++|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 34456778899999999999999774 688899998865422 2345689999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++|+|.+++. ....+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++...
T Consensus 82 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 82 MEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred EecCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 99999999999984 234578889999999999999999974 37999999999999999999999999999765
Q ss_pred CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
.... .....|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 155 IDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 3221 22346899999999999989999999999999999999999999643
No 75
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-35 Score=323.01 Aligned_cols=242 Identities=23% Similarity=0.287 Sum_probs=193.7
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
++||+|+||.||++.. .+++.||||++.+.. ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 468999999996532 223456888999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|..++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 151 (328)
T cd05593 81 ELFFHLS-----RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-AT 151 (328)
T ss_pred CHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cc
Confidence 9998883 345688999999999999999999985 99999999999999999999999999987542221 12
Q ss_pred EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 665 VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+ +..+..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-------~~~~~~~------~~~~p~-- 216 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILME------DIKFPR-- 216 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-------HHHhccC------CccCCC--
Confidence 2345699999999999999999999999999999999999999964321110 0111000 011111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
.....+.+++.+|++.+|.+|| ++.++++.
T Consensus 217 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 --TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 2234567888899999999997 88888764
No 76
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.2e-36 Score=319.51 Aligned_cols=243 Identities=21% Similarity=0.257 Sum_probs=195.3
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+.++.+++||||+++++++.+....++||||
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 82 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY 82 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence 556789999999999999764 68999999985432 12345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 83 VPGGELFSYLR-----NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred CCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 99999999984 334688899999999999999999995 9999999999999999999999999999865432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. ....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .......+..
T Consensus 155 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-------~~~~i~~~~~-------- 215 (291)
T cd05612 155 T----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-------IYEKILAGKL-------- 215 (291)
T ss_pred c----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCc--------
Confidence 1 23458999999999999999999999999999999999999996432211 1111111110
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPS-----MGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~~ 776 (839)
..+......+.+++.+|++.+|.+||+ ++++++.
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111112345678888999999999995 7776543
No 77
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.7e-35 Score=316.02 Aligned_cols=270 Identities=24% Similarity=0.330 Sum_probs=198.5
Q ss_pred hhccccccccCCCceEEEEEe-----CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeec--CCceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-----GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE--GSNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 576 (839)
.+.+.+.||+|+||.||++.. .+++.||+|.+........+.+.+|++++.+++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 455678999999999999974 3578999999876655556688999999999999999999998743 346889
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
|+||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 85 v~e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 85 VMEYLPYGSLRDYLQK----HRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEecCCCCHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 9999999999999842 234589999999999999999999985 999999999999999999999999999987
Q ss_pred cCCCCceeE--EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 657 MGREHSQVV--TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 657 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
......... ....++..|+|||.+.+..++.++||||||+++|||++|..++.......................+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 643322111 112234569999999988999999999999999999998876532211000000000000000000001
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.+...............+.+++.+||+.+|++||||.+|++.|+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1111111111122335688899999999999999999999999754
No 78
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-36 Score=304.85 Aligned_cols=249 Identities=23% Similarity=0.372 Sum_probs=208.2
Q ss_pred HHHhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
....|+|.+.||+|.||.|-++. ...|+.||||.+++.... +...+++|+++|..|+||||+.++.+|+..+...|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34567888999999999999995 478999999999765433 34467899999999999999999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
||||..+|.|.+|+ .....|++.+..+++.||..|+.|+|. ++++|||||.+|||||+++++||+||||+-+
T Consensus 131 vMEYaS~GeLYDYi-----Ser~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 131 VMEYASGGELYDYI-----SERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EEEecCCccHHHHH-----HHhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhh
Confidence 99999999999999 456789999999999999999999998 5999999999999999999999999999988
Q ss_pred cCCCCceeEEeeccccceeCcccccCCCC-CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
+... .....++|.+.|.+||++.+.+| ....|-|||||+||.|+.|.-||++.+... ..+++..|...
T Consensus 203 y~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~-------lvrQIs~GaYr-- 271 (668)
T KOG0611|consen 203 YADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR-------LVRQISRGAYR-- 271 (668)
T ss_pred hccc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH-------HHHHhhccccc--
Confidence 7432 23456789999999999999998 478999999999999999999998654321 11122222111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.++.+....-++.|++-.+|++|.|+.+|...-
T Consensus 272 ---------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 272 ---------EPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ---------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 122334456788999999999999999998864
No 79
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.4e-35 Score=308.62 Aligned_cols=247 Identities=28% Similarity=0.424 Sum_probs=197.7
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcc-hHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChh
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
++||+|+||.||+|...+++.+|+|.+....... ...+.+|++++.+++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4699999999999998889999999987554322 346889999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEe
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 667 (839)
+++.. ....+++..+..++.|++.+|.|||+. +++||||||+||+++.++.+||+|||++.............
T Consensus 81 ~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 81 SFLRK----KKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 98842 234578999999999999999999984 99999999999999999999999999997643322222222
Q ss_pred eccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 668 ~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
..++..|+|||++.+..++.++||||||+++||+++ |..||....... .......+. ....+.
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-------~~~~~~~~~---------~~~~~~ 217 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKGY---------RMSCPQ 217 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCC---------CCCCCC
Confidence 334677999999998999999999999999999998 998986432111 111111110 011112
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.....+.+++.+|++.+|++||++.++++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23456888999999999999999999999885
No 80
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=323.44 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=199.2
Q ss_pred HHHHhhccccccccCCCceEEEEEeCC--CcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
+....+.+.+.||+|+||.||+|.... +..||+|++.... ......+.+|+.++..++||||+++++++.++...
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 445567788999999999999997533 3689999985432 22345688999999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 107 ~lv~Ey~~~g~L~~~i~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLR-----RNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EEEEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCC
Confidence 99999999999999984 335688999999999999999999995 9999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..+..
T Consensus 179 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~i~~~~~-- 245 (340)
T PTZ00426 179 KVVDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-------LIYQKILEGII-- 245 (340)
T ss_pred eecCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCC--
Confidence 876432 23356999999999999988999999999999999999999999643221 11111111110
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
.+.... ...+.+++.+|++.+|.+|+ +++++++.
T Consensus 246 ----~~p~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 ----YFPKFL----DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----CCCCCC----CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 011112 23456788889999999995 88888765
No 81
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.5e-35 Score=317.14 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=204.8
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
...+.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++.+++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 34566778999999999999974 234579999987654455667999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCC--------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCcee
Q 038743 576 LVYEFMKNGSLDKWIFPSYH--------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~k 647 (839)
+||||+++++|.++|..... .....+++..++.++.|++.||+|||+. +++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 99999999999999853211 1223589999999999999999999985 999999999999999999999
Q ss_pred ecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhh
Q 038743 648 VSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFK 725 (839)
Q Consensus 648 l~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 725 (839)
|+|||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |+.||......+ ...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-------~~~ 233 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIE 233 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHH
Confidence 9999999865332211 1223345778999999999999999999999999999998 898886432211 111
Q ss_pred hhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 726 EMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 726 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
....+.... ... .....+.+++.+|++.+|.+||++.+|++.|+...
T Consensus 234 ~i~~~~~~~-----~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 234 CITQGRVLQ-----RPR----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHcCCcCC-----CCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 111111110 111 12345788999999999999999999999997654
No 82
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-35 Score=329.52 Aligned_cols=265 Identities=22% Similarity=0.390 Sum_probs=203.4
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCcc-hHHHHHHHHHhhccc-cCCcccccceee
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMH-HMNLVRLCGYCS 569 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~g~~~ 569 (839)
.++....+.+.++||+|+||.||+|++. .++.||||+++...... ...+.+|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3444555667789999999999999753 34689999997543332 346889999999997 999999999999
Q ss_pred cCCceEEEEeeccCCChhhhcccCCC------------------------------------------------------
Q 038743 570 EGSNRLLVYEFMKNGSLDKWIFPSYH------------------------------------------------------ 595 (839)
Q Consensus 570 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 595 (839)
.....++|+||+++|+|.++|+....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999864311
Q ss_pred ---------------------------------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCC
Q 038743 596 ---------------------------------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPE 636 (839)
Q Consensus 596 ---------------------------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~ 636 (839)
.....+++..++.++.||+.||+|||+ ++++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcc
Confidence 011346778889999999999999998 49999999999
Q ss_pred cEEECCCCceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCC
Q 038743 637 NILLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDA 714 (839)
Q Consensus 637 Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~ 714 (839)
|||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 999999999999999999865332211 1122346788999999998889999999999999999998 88888543211
Q ss_pred CCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 715 EDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+. ....+..+. ....+......+.+++..||+.+|.+||+|++|++.|+..
T Consensus 349 ~~------~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 349 EQ------FYNAIKRGY---------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HH------HHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 10 011111110 0111112235677888899999999999999999999864
No 83
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.5e-35 Score=314.68 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=199.4
Q ss_pred ccccccccCCCceEEEEEe-----CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecC--CceEEE
Q 038743 506 NFAQLLGTGGFGSVYKGSL-----GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLV 577 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv 577 (839)
.+.+.||+|+||+||++.. .+++.||+|.+..... .....+.+|++++++++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5678999999999988653 4578999999865432 3456788999999999999999999988653 457899
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 87 ~e~~~~~~l~~~~~------~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 87 MEYVPLGSLRDYLP------KHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ecCCCCCCHHHHHH------HcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 99999999999983 23589999999999999999999984 9999999999999999999999999999876
Q ss_pred CCCCcee--EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 658 GREHSQV--VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 658 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
....... .....++..|+|||.+....++.++||||||++++||++|+.|+......... ...............+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE-MIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh-hhcccccccchhhhhhh
Confidence 4322211 11223566799999999888999999999999999999999998543211000 00000000000111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
++.......+......+.+++..||+.+|++||+|++|+++|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 222111122223345688889999999999999999999999764
No 84
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.9e-35 Score=309.46 Aligned_cols=245 Identities=25% Similarity=0.395 Sum_probs=193.9
Q ss_pred ccccCCCceEEEEEe---CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 510 LLGTGGFGSVYKGSL---GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
.||+|+||.||+|.+ .+++.+|+|+++.... ...+++..|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999964 3578999999864432 23457899999999999999999999885 45678999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||.||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~-----~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQ-----KNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 9999983 334688999999999999999999985 89999999999999999999999999998765433221
Q ss_pred E--EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 665 V--TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 665 ~--~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ....++..|+|||.+....++.++||||||+++|||++ |+.||......+ ....+..+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~i~~~~~--------- 216 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-------VTQMIESGER--------- 216 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHCCCC---------
Confidence 1 12234578999999988889999999999999999998 999996432211 0111111110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+......+.+++.+||+.+|++||+|.+|++.|++
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11112233457789999999999999999999999975
No 85
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.4e-35 Score=309.07 Aligned_cols=247 Identities=25% Similarity=0.379 Sum_probs=194.5
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999976 4789999998864432 3345789999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee-E
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV-V 665 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~ 665 (839)
.+++.. ....+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+|||++.......... .
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 81 LTFLRT----EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 999842 234688999999999999999999985 99999999999999999999999999997643221111 1
Q ss_pred EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 666 TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
.....+..|+|||.+.+..++.++||||||+++|||++ |..|+....... ...... .......
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~~---------~~~~~~~ 217 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAIE---------QGVRLPC 217 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHHH---------cCCCCCC
Confidence 11123467999999999999999999999999999997 888885322110 001110 0011111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
+......+.+++.+|++.+|++||++.+|+++|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2223456788999999999999999999999986
No 86
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.4e-35 Score=309.43 Aligned_cols=253 Identities=27% Similarity=0.399 Sum_probs=200.7
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.+.||+|+||.||++....+..+|+|.+... ....+.+.+|++++++++|+|++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 446777899999999999999877778999988643 233467889999999999999999998875 456889999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 84 KGSLLDFLKEG---DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 99999999532 234578999999999999999999985 899999999999999999999999999987643322
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ .......+ ..
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~---------~~ 221 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-------VLEQVERG---------YR 221 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcC---------CC
Confidence 22223346678999999998899999999999999999999 898886432211 01111111 00
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+......+.+++.+|++.+|++||++.+|++.|+.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11122234567888899999999999999999999975
No 87
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.3e-35 Score=322.66 Aligned_cols=241 Identities=24% Similarity=0.281 Sum_probs=192.2
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||++.. .+|+.||+|++.... ......+.+|++++..++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999976 468999999996532 223346778999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 151 (323)
T cd05595 81 ELFFHLS-----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-AT 151 (323)
T ss_pred cHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cc
Confidence 9988883 345689999999999999999999985 99999999999999999999999999987532221 12
Q ss_pred EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 665 VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+. ..+..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-------~~~~~~~~------~~~p~-- 216 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-------FELILMEE------IRFPR-- 216 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHhcCC------CCCCC--
Confidence 2335689999999999999999999999999999999999999964322110 01110000 01111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVK 775 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~ 775 (839)
.....+.+++.+||+.+|.+|| ++.++++
T Consensus 217 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 217 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred --CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 2234567888889999999998 7888765
No 88
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=338.65 Aligned_cols=251 Identities=20% Similarity=0.241 Sum_probs=199.2
Q ss_pred hccccccccCCCceEEEEEeC-C-CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-D-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+.+++.++||||+++++++...+..+|||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 677889999999999999653 3 67899997754433444567889999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.++|.... .....+++..+..++.||+.||.|||+. +|+||||||+||||+.++.+||+|||+++.+.....
T Consensus 149 gg~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 149 GGDLNKQIKQRL-KEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCHHHHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999885321 2334688889999999999999999995 999999999999999999999999999987654322
Q ss_pred e-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 Q-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .......+.. .
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-------~~~~~~~~~~----~---- 289 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-------IMQQVLYGKY----D---- 289 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC----C----
Confidence 1 2334569999999999999999999999999999999999999996432111 0111111110 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..+......+.+++.+||+.+|++||++.+++.
T Consensus 290 -~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 -PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011122345778889999999999999999865
No 89
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-35 Score=314.46 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=200.2
Q ss_pred HHHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
....+.+.+.||+|+||.||+|... .+..||||++..... ....++.+|+.++..++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3455777889999999999999652 356899999864322 234568899999999999999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCC-----CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceee
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHH-----RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKV 648 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl 648 (839)
.++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +++||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998532111 123467888999999999999999984 9999999999999999999999
Q ss_pred cccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhh
Q 038743 649 SDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 649 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~-------~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ-------VLRF 233 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHH
Confidence 9999997653322211 112345778999999999999999999999999999998 688885432111 0111
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
..+.... ..+......+.+++.+|++.+|++||++.|++++|++
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 234 VMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111110 0111223467889999999999999999999999863
No 90
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.4e-35 Score=318.55 Aligned_cols=243 Identities=23% Similarity=0.320 Sum_probs=189.0
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++.. .+++.||+|++++.. ......+..|+.++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999976 467899999997542 22334577888888776 899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~-----~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~- 151 (329)
T cd05618 81 GDLMFHMQ-----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD- 151 (329)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-
Confidence 99988873 335688999999999999999999995 999999999999999999999999999975322211
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCC--ccchhhhhhhhccCccccccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED--FFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .....+..+.......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------- 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC---------
Confidence 22345689999999999999999999999999999999999999964322111 1111111121111110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
.++......+.+++.+||+.+|++||+.
T Consensus 223 -~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 -RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1122223456788889999999999983
No 91
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.8e-35 Score=323.25 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=189.3
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.++||+|+||.||+++. .+++.||||++..... .....+.+|+++++.++|+||+++++++.+....++||||+++
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 156 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence 4567899999999999976 4689999999864322 2345689999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 157 ~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 223 (353)
T PLN00034 157 GSLEGTH---------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD- 223 (353)
T ss_pred Ccccccc---------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence 9986533 345677889999999999999995 999999999999999999999999999987643221
Q ss_pred eEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
......||..|+|||.+.. ...+.++|||||||++|||++|+.||....... |...... +. .
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~~~~------~~-~ 290 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------WASLMCA------IC-M 290 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHH------Hh-c
Confidence 1233468999999998743 234568999999999999999999997322111 1000000 00 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.............+.+++.+||+.+|++||++.||++.
T Consensus 291 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011112234457888899999999999999999875
No 92
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-35 Score=326.68 Aligned_cols=254 Identities=19% Similarity=0.240 Sum_probs=197.5
Q ss_pred HHHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
....+.+.+.||+|+||.||+++.. +++.||+|++.+.. ......+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3456777889999999999999764 68899999986421 2233457889999999999999999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
||||+++|+|.+++. ...++......++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 121 v~Ey~~gg~L~~~l~------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 121 VMEYMPGGDLVNLMS------NYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EEcCCCCCcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 999999999999883 23577888888999999999999995 999999999999999999999999999987
Q ss_pred cCCCCceeEEeeccccceeCcccccCC----CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVSNR----PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
.............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+.....
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-------~~~~i~~~~~ 264 (370)
T cd05596 192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------TYSKIMDHKN 264 (370)
T ss_pred ccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-------HHHHHHcCCC
Confidence 644332223345699999999998653 47899999999999999999999997433211 1111111100
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFM--RPSMGEVVKM 776 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~--RPt~~~v~~~ 776 (839)
.+...........+.+++..|++.+|.+ ||++.++++.
T Consensus 265 ------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 ------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0000001112345677888899988987 9999999764
No 93
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-35 Score=313.53 Aligned_cols=255 Identities=25% Similarity=0.364 Sum_probs=196.2
Q ss_pred hhccccccccCCCceEEEEEeC-CCc----EEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGT----LVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
.+.+.+.||+|+||.||+|... +++ .+++|.+..... ....++..|+..++++.||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 4456689999999999999763 444 478888754322 223567888889999999999999998864 557889
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
+||+++|+|.+++.. ....+++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++..
T Consensus 87 ~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 87 TQLSPLGSLLDHVRQ----HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEeCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 999999999999942 235689999999999999999999984 8999999999999999999999999999876
Q ss_pred CCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 658 GREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 658 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... . .+.+..+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~----~~~~~~~~~--~ 230 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---V----PDLLEKGER--L 230 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHCCCc--C
Confidence 433221 2233457788999999999999999999999999999998 999986432211 0 011111110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSAD 782 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~ 782 (839)
..+. .....+.+++.+|+..+|++||++.|+++.|.....
T Consensus 231 ~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 AQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0111 112346778889999999999999999999987543
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-35 Score=316.65 Aligned_cols=263 Identities=20% Similarity=0.252 Sum_probs=194.7
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.|.+.++||+|+||.||+|.. .+++.||+|.++... ......+.+|+.++++++||||+++++++..+...++||||+
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 85 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYL 85 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCC
Confidence 466778999999999999976 468899999986432 223456789999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++ +|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~-~l~~~l~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 86 DS-DLKQYLDN----CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred Cc-CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 75 89888732 234578889999999999999999995 99999999999999999999999999998653222
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchh--------hhhhhhcc-Cc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPG--------WAFKEMTN-GT 731 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~--------~~~~~~~~-~~ 731 (839)
. ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+...... ..+..... ..
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred c-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 1 1223457899999998865 568999999999999999999999996543221110000 00000000 00
Q ss_pred ccccccccccCCC----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 732 PLKVADRRLEGAV----EEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 732 ~~~~~~~~l~~~~----~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
......+...... .......+.+++.+|++.+|.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0001111100000 0011235678899999999999999999974
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-35 Score=326.08 Aligned_cols=251 Identities=23% Similarity=0.295 Sum_probs=198.8
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.|.+.+.||+|+||.||++... +++.||||++.... ......+..|++++..++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 3567789999999999999774 68999999986432 2334568899999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 82 YMPGGDLMNLLIR-----KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred CCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999842 25788999999999999999999994 999999999999999999999999999987644
Q ss_pred CC----------------------------ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 660 EH----------------------------SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 660 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
.. ........||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 11123356899999999999999999999999999999999999999754
Q ss_pred CCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 038743 712 GDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPS-MGEVVKM 776 (839)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-~~~v~~~ 776 (839)
.... ....+.... ..+...........+.+++..|++ +|.+||+ +.++++.
T Consensus 234 ~~~~-------~~~~i~~~~------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQE-------TYNKIINWK------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHH-------HHHHHhccC------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 3211 011111000 000000000123456677788997 9999999 9999875
No 96
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.2e-35 Score=315.02 Aligned_cols=263 Identities=21% Similarity=0.296 Sum_probs=190.8
Q ss_pred hhccccccccCCCceEEEEEe--CCCcEEEEEEecccCC--cchHHHHHHHHHhhcc---ccCCcccccceee-----cC
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL--GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSM---HHMNLVRLCGYCS-----EG 571 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~-----~~ 571 (839)
.|.+.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.++..+ +||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 356778999999999999976 3468899999864322 2234566777776665 6999999999885 34
Q ss_pred CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
...++||||++ ++|.+++... ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 56899999996 6898888432 234588999999999999999999995 9999999999999999999999999
Q ss_pred CcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh-----hh
Q 038743 652 GLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-----KE 726 (839)
Q Consensus 652 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~-----~~ 726 (839)
|+++..... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....+.+......... ..
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 999876433 22334568999999999998899999999999999999999999997654321110000000 00
Q ss_pred hccC--cccccccccccC---CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 727 MTNG--TPLKVADRRLEG---AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 727 ~~~~--~~~~~~~~~l~~---~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+... ............ .........+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 000000000000 000112345678999999999999999999975
No 97
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-35 Score=314.34 Aligned_cols=259 Identities=20% Similarity=0.327 Sum_probs=201.3
Q ss_pred HHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCcc-hHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
...+.+.+.||+|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 345667789999999999999763 25789999997543322 35688999999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCC-----------CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC
Q 038743 575 LLVYEFMKNGSLDKWIFPSY-----------HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN 643 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~ 643 (839)
++++||+++++|.+++.... ......+++..+..++.|++.||+|||+. +|+||||||.|||++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 99999999999999984211 11224578888999999999999999985 99999999999999999
Q ss_pred CceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchh
Q 038743 644 FCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPG 721 (839)
Q Consensus 644 ~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~ 721 (839)
+.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------ 234 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------ 234 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 99999999999865432221 1233446789999999988889999999999999999998 887875432111
Q ss_pred hhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 722 WAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.......+.. ...+......+.+++..|++.+|++||++.+|+..|+.
T Consensus 235 -~~~~i~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 -VIEMIRNRQV---------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHcCCc---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111111 01122234457788999999999999999999999863
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.9e-35 Score=320.58 Aligned_cols=251 Identities=21% Similarity=0.269 Sum_probs=195.4
Q ss_pred hccccccccCCCceEEEEEe----CCCcEEEEEEecccC----CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVL----PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 575 (839)
+.+.+.||+|+||.||+++. .+++.||+|++.+.. ....+.+..|+.++.++ +|+||+++++++......+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 45678999999999999865 368899999986431 12234578899999999 5999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 82 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 82 LILDYVSGGEMFTHLY-----QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 9999999999999884 335688999999999999999999985 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
.+............||+.|+|||++.+. .++.++|||||||++|||++|+.||......... .........
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~~~----- 225 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ---SEVSRRILK----- 225 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH---HHHHHHHhc-----
Confidence 6544333333445699999999999875 4789999999999999999999999644322110 001111110
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
.++.+ +......+.+++.+|++.+|++|| +++++++.
T Consensus 226 -~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 -CDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -CCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 11111 112234567788899999999999 66677653
No 99
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-35 Score=326.25 Aligned_cols=192 Identities=23% Similarity=0.266 Sum_probs=166.2
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.|.+.+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+|++.
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 466788999999999999965 568999999753 2357899999999999999999999999999999999985
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
++|..++. ....+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 167 -~~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 167 -TDLYCYLA-----AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred -CCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 68888773 334688999999999999999999995 999999999999999999999999999976433322
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
.......||+.|+|||++.+..++.++|||||||++|||++|+.|+-.
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 233445799999999999999999999999999999999999988743
No 100
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.5e-35 Score=318.04 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=192.9
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||++... +++.||||++++.. ......+..|..++..+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999764 68899999997532 22234578899999888 799999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~-----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~ 151 (329)
T cd05588 81 GDLMFHMQ-----RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-D 151 (329)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC-C
Confidence 99998883 335789999999999999999999985 99999999999999999999999999987432211 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCC--CccchhhhhhhhccCccccccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE--DFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||+...... ......+..+....... .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~- 224 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------RI- 224 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------CC-
Confidence 2234568999999999999999999999999999999999999997433221 11111111221111110 11
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCC------HHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPS------MGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt------~~~v~~ 775 (839)
+......+.+++.+|++.+|.+||+ +.++++
T Consensus 225 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 225 ---PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1122345678888999999999997 566654
No 101
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.1e-35 Score=319.88 Aligned_cols=241 Identities=24% Similarity=0.328 Sum_probs=191.6
Q ss_pred cccccCCCceEEEEEe----CCCcEEEEEEecccC----CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVL----PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.||+|+||.||+++. .+++.||||+++... ......+..|+.++..++||||+++++++..+...++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 357899999986431 12234578899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+.+.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLE-----REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 99999999883 334677888888999999999999995 9999999999999999999999999999754322
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... .......+..
T Consensus 154 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-------~~~~~~~~~~-------- 217 (323)
T cd05584 154 GT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-------TIDKILKGKL-------- 217 (323)
T ss_pred CC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC--------
Confidence 21 2233568999999999999889999999999999999999999996432211 1111111110
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~ 775 (839)
..+......+.+++.+|++.+|++|| ++.++++
T Consensus 218 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 --NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11112234567888999999999999 7887766
No 102
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-35 Score=322.08 Aligned_cols=243 Identities=22% Similarity=0.282 Sum_probs=193.1
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||++.. .+++.||+|++.... .....++..|++++..++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999975 578999999996532 223356788999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|..++. ....+++..+..++.||+.||+|||+. .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~ 152 (325)
T cd05594 81 ELFFHLS-----RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-T 152 (325)
T ss_pred cHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-c
Confidence 9998883 345789999999999999999999973 4899999999999999999999999999875432221 2
Q ss_pred EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCC
Q 038743 665 VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAV 744 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 744 (839)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......+. ..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-------~~~i~~~~------~~~p~~- 218 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMEE------IRFPRT- 218 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-------HHHHhcCC------CCCCCC-
Confidence 2334699999999999999999999999999999999999999964322110 01110000 011111
Q ss_pred CHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 745 EEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 745 ~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
....+.+++.+|++.+|++|+ ++.++++.
T Consensus 219 ---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 ---LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ---CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 233467788889999999996 89998754
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.8e-35 Score=324.21 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=194.1
Q ss_pred HHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
...+.+.+.||+|+||.||+++.. +++.+|+|.+.+.. ......+.+|+.++..++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 345677889999999999999774 58899999986421 22334578899999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++|+|.+++. ...+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++...
T Consensus 122 ~Ey~~gg~L~~~l~------~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 122 MEYMPGGDLVNLMS------NYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 99999999999883 23578888999999999999999995 9999999999999999999999999999876
Q ss_pred CCCCceeEEeeccccceeCcccccCC----CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNR----PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...+....
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~-------~~~i~~~~-- 263 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT-------YSKIMDHK-- 263 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCC--
Confidence 54333233455699999999998754 378999999999999999999999964332110 11111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCC--CCCCHHHHHHH
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVF--MRPSMGEVVKM 776 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~--~RPt~~~v~~~ 776 (839)
..+...........+.+++..|++..+. .||++.++++.
T Consensus 264 ----~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 ----NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0000001112233455666778875554 38899999886
No 104
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.3e-35 Score=313.80 Aligned_cols=260 Identities=25% Similarity=0.369 Sum_probs=202.7
Q ss_pred HHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
...+.+.+.||+|+||.||++... ....+|+|.+.... .....++.+|+.++.++ +|+||+++++++.....
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 344567789999999999999763 23689999986532 22345688999999999 89999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCC-----------CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC
Q 038743 574 RLLVYEFMKNGSLDKWIFPSY-----------HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE 642 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~ 642 (839)
.+++|||+++|+|..++.... ......+++..++.++.||+.||+|||+ ++|+||||||+|||+++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcC
Confidence 999999999999999985321 0234578999999999999999999998 49999999999999999
Q ss_pred CCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccch
Q 038743 643 NFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYP 720 (839)
Q Consensus 643 ~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 720 (839)
++.+||+|||+++.+....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----- 242 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----
Confidence 9999999999998764432211 222335678999999999999999999999999999997 888875322111
Q ss_pred hhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 721 GWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+....+. ....+......+.+++.+|++.+|++||||.++++.|+..
T Consensus 243 --~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 243 --LFKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred --HHHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 111111111 1111223345678899999999999999999999999764
No 105
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7e-35 Score=309.28 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=198.6
Q ss_pred ccccccccCCCceEEEEEeCC----CcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCc------
Q 038743 506 NFAQLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN------ 573 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------ 573 (839)
.+.+.||+|+||.||+|.... +..||+|+++... .....++.+|++.+..++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 456889999999999997632 3689999986432 2234578999999999999999999998866554
Q ss_pred eEEEEeeccCCChhhhcccCCC-CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYH-HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
.++++||+++|+|..++..... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcc
Confidence 7999999999999998854321 1234688999999999999999999985 99999999999999999999999999
Q ss_pred cceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 653 LAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 653 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
+++.+....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+ .......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-------~~~~~~~~ 231 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-------IYDYLRHG 231 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcC
Confidence 998764332221 122335678999999998999999999999999999999 888885432211 01111111
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.. ...+......+.+++.+|++.+|++||++.+|++.|+..
T Consensus 232 ~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NR---------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 011223345688889999999999999999999999753
No 106
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=292.77 Aligned_cols=262 Identities=18% Similarity=0.198 Sum_probs=193.6
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcc--hHHHHHHHHHhhccccCCcccccceee--cCCceEEEEee
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMHHMNLVRLCGYCS--EGSNRLLVYEF 580 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lv~e~ 580 (839)
...+.|++|.||.||+|+. .+++.||+|+++-..... .-...+|+.+|.+++|||||.+-.+.. +-+..||||||
T Consensus 79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~ 158 (419)
T KOG0663|consen 79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY 158 (419)
T ss_pred HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence 3456899999999999966 578999999996432111 124689999999999999999988764 34579999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
|+. +|..+|.. ..+.+...+..-+..|+++||+|||. +.|+|||||++|+|+...|.+||+|||||+.++..
T Consensus 159 ~Eh-DLksl~d~----m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 159 VEH-DLKSLMET----MKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHh-hHHHHHHh----ccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 987 88888843 34688899999999999999999999 49999999999999999999999999999998765
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh----hhhhhccC----c
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW----AFKEMTNG----T 731 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~----~~~~~~~~----~ 731 (839)
. ...+..+-|..|.|||++.+ ..|+...|+||+|||+.||+++++.|.+.........+.. +.+....+ .
T Consensus 231 ~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 231 L-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred c-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 3 23455567999999999887 5699999999999999999999999876654322111000 00000000 0
Q ss_pred ------ccccccccccCCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 ------PLKVADRRLEGAVEEE-ELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ------~~~~~~~~l~~~~~~~-~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.....-..++..+... ..+.-.++....+..||.+|-|+++.++.
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0000001111111111 12334456666899999999999998764
No 107
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=315.11 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=208.0
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEeccc--CCcchHHHHHHHHHhhccccCCcccccceeecCCc-eEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN-RLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-~~lv~ 578 (839)
..|...+++|+|+||.++..+.+ ++..+++|.+.-. .....+....|+.++++++|||||.+.+.+.+.+. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 34667789999999999999763 5789999998533 23334468899999999999999999999998888 99999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
+|++||+|.+.|... ++..+.+..+.+++.||+.|+.|||+ +.|+|||||+.|||++.+..+||+|||+|+.+.
T Consensus 84 ~Y~eGg~l~~~i~~~---k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQ---KGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eecCCCCHHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 999999999999543 46788999999999999999999997 699999999999999999999999999999987
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
.+... ...+.||+.||.||.+.+.+|..|+|||||||++|||++-+++|....... .+.+ +...
T Consensus 158 ~~~~~-a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~------Li~k---------i~~~ 221 (426)
T KOG0589|consen 158 PEDSL-ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE------LILK---------INRG 221 (426)
T ss_pred Cchhh-hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH------HHHH---------Hhhc
Confidence 76532 345679999999999999999999999999999999999999997543221 1111 1111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.....+......+..++..|++.+|..||++.+++.+
T Consensus 222 -~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 -LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1223444556667788888999999999999999876
No 108
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.2e-35 Score=306.97 Aligned_cols=256 Identities=24% Similarity=0.416 Sum_probs=203.7
Q ss_pred HHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
+..+.+.+.+.||+|+||.||++...++..+|+|.+... ......+.+|++++++++|+||+++.+++.+ ...+++||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 345567788999999999999999878888999988643 2234678999999999999999999999887 77899999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 81 FMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred eCCCCcHHHHHHhC---CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 99999999998432 345678899999999999999999984 999999999999999999999999999986643
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
..........++..|+|||++....++.++||||||+++||+++ |+.||....... ....+..+..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~------ 221 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALERGYR------ 221 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCC------
Confidence 32222223345678999999998889999999999999999998 899986432111 0111111110
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
..........+.+++.+|++.+|++||++.+|+++|+.
T Consensus 222 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 ---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112233467888999999999999999999999974
No 109
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.5e-35 Score=311.42 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=201.2
Q ss_pred HhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
..+.+.++||+|+||.||++... ++..+|+|.+..........+.+|++++.+++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 34456789999999999999642 356899999876655556789999999999999999999999999999999
Q ss_pred EEeeccCCChhhhcccCCC----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCce
Q 038743 577 VYEFMKNGSLDKWIFPSYH----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCP 646 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~ 646 (839)
+|||+++++|.+++..... .....+++..++.++.||+.||+|||+. +++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999853211 1113588999999999999999999985 99999999999999999999
Q ss_pred eecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhh
Q 038743 647 KVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAF 724 (839)
Q Consensus 647 kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 724 (839)
||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. .
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-------~ 234 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-------I 234 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-------H
Confidence 999999998654322211 122335678999999999999999999999999999998 8988853322110 0
Q ss_pred hhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 725 KEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 725 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.....+.. ...+......+.+++.+||+.+|++||++.+|++.|+.
T Consensus 235 ~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 235 ECITQGRE---------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHcCcc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11111100 00111223457788899999999999999999999863
No 110
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.9e-35 Score=307.75 Aligned_cols=256 Identities=28% Similarity=0.440 Sum_probs=205.2
Q ss_pred HHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
....+.+.++||+|+||.||++...+++.||||.+... ....+++.+|+.++++++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 34556778899999999999999888889999998754 33456799999999999999999999999998999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||+++.+...
T Consensus 83 ~~~~~L~~~i~~~---~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 83 MSKGSLLDFLKSG---EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred cCCCCHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999999532 335689999999999999999999984 8999999999999999999999999999876532
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.........++..|+|||.+.+..++.++||||||++++|+++ |+.||....... .......+
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~~--------- 220 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-------VLEQVERG--------- 220 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcC---------
Confidence 2222222334568999999998899999999999999999998 999985432111 11111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.....+......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0001111224467889999999999999999999999874
No 111
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.7e-35 Score=306.15 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=193.3
Q ss_pred ccccCCCceEEEEEeC---CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCC
Q 038743 510 LLGTGGFGSVYKGSLG---DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
.||+|+||.||+|.+. .+..||+|++..... ...+++.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999763 355799999865432 22456899999999999999999999885 457899999999999
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeE
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV 665 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 665 (839)
|.+++.. ....+++..+++++.||+.||+|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 81 LNKFLSG----KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 9999842 234689999999999999999999985 999999999999999999999999999986543322211
Q ss_pred --EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 666 --TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 666 --~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
....++..|+|||.+....++.++||||||+++||+++ |+.||....... ....+..+. ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~---------~~ 217 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-------VMSFIEQGK---------RL 217 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCC---------CC
Confidence 11223578999999988889999999999999999996 999986432211 011111111 11
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+......+.+++..||+.+|++||++.+|.+.|+..
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 12223345677888899999999999999999998753
No 112
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.3e-35 Score=324.79 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=190.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||+||+|.. .+++.||||++.... ......+.+|++++.+++||||+++++++.+....++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence 45667899999999999965 568899999996432 22345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~-----~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 83 IPGGDMMSLLI-----RMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 99999999984 334678888889999999999999995 9999999999999999999999999998643211
Q ss_pred Cce----------------------------------------------eEEeeccccceeCcccccCCCCCCcccEEeh
Q 038743 661 HSQ----------------------------------------------VVTMVRGTRGYLAPEWVSNRPITVKADVYSY 694 (839)
Q Consensus 661 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~ 694 (839)
... ......||+.|+|||.+.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 0123469999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHh--ccccCCCCCCCHHH
Q 038743 695 GMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFW--CIQDEVFMRPSMGE 772 (839)
Q Consensus 695 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~--Cl~~~p~~RPt~~~ 772 (839)
||++|||++|+.||......+.. ...........+ + ....++.+ +.+++.+ |+..++..||++.+
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~------~~i~~~~~~~~~--~-~~~~~s~~----~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQ------LKVINWENTLHI--P-PQVKLSPE----AVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHH------HHHHccccccCC--C-CCCCCCHH----HHHHHHHHccCcccccCCCCHHH
Confidence 99999999999999644321110 000000000000 0 00112333 3344433 66778888999999
Q ss_pred HHHH
Q 038743 773 VVKM 776 (839)
Q Consensus 773 v~~~ 776 (839)
++..
T Consensus 302 ~l~h 305 (381)
T cd05626 302 IKAH 305 (381)
T ss_pred HhcC
Confidence 9875
No 113
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.5e-35 Score=308.79 Aligned_cols=254 Identities=26% Similarity=0.463 Sum_probs=200.4
Q ss_pred hhccccccccCCCceEEEEEeC-CC---cEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DG---TLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+...+.||+|+||.||+|... ++ ..+|+|.++... .....++..|++++.+++||||+++.+++......++||
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT 85 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence 4556789999999999999874 23 379999986543 233457899999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++++|.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++....
T Consensus 86 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 86 EYMENGALDKYLRD----HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 99999999999842 235688999999999999999999985 89999999999999999999999999998764
Q ss_pred CCCceeEE--eeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 659 REHSQVVT--MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 659 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
........ ....+..|+|||++....++.++||||||+++|||++ |+.||......+ ....+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-------~~~~i~~~~---- 227 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-------VMKAINDGF---- 227 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhcCC----
Confidence 33222211 1223467999999998889999999999999999997 999985432111 111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...........+.+++.+|++.+|++||+|.+|++.|++.
T Consensus 228 -----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0111112345678999999999999999999999999764
No 114
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.7e-35 Score=313.68 Aligned_cols=258 Identities=28% Similarity=0.401 Sum_probs=200.3
Q ss_pred hccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
+.+.+.||+|+||.||+|... ....+|+|.+..... .....+.+|+.++..++||||+++++.+......+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 345688999999999999652 235799998865432 2345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCC-------------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 578 YEFMKNGSLDKWIFPSYH-------------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
+||+++|+|.+++..... .....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheE
Confidence 999999999998753211 1224588999999999999999999984 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAED 716 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~ 716 (839)
|+++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||++++||++ |+.||.......
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~- 237 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER- 237 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH-
Confidence 99999999999999998653322211 222345678999999988889999999999999999998 999885432111
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
.+...... .....+......+.+++.+|++.+|++||++.++++.|++..
T Consensus 238 ------~~~~~~~~---------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 238 ------LFNLLKTG---------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ------HHHHHhCC---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 11111111 111111223346788999999999999999999999998653
No 115
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6e-35 Score=316.41 Aligned_cols=240 Identities=23% Similarity=0.309 Sum_probs=187.2
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||+|... +++.||||+++... ......+..|..++..+ +||||+++++++..+...++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 57899999986532 22234456677776654 899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~-----~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~ 151 (316)
T cd05592 81 GDLMFHIQ-----SSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-G 151 (316)
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-C
Confidence 99998883 234688899999999999999999995 99999999999999999999999999998643222 2
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ....+.... + .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-------~~~~i~~~~------~----~ 214 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-------LFDSILNDR------P----H 214 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC------C----C
Confidence 2334568999999999999999999999999999999999999997443211 011111100 1 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMG-EVV 774 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~-~v~ 774 (839)
.+......+.+++.+||+.+|.+||++. +++
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111233456788889999999999875 443
No 116
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.1e-35 Score=316.90 Aligned_cols=237 Identities=25% Similarity=0.345 Sum_probs=185.4
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHH-HhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVN-TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||+++. .+++.||+|++.+.. .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999977 468899999986432 122334555554 57788999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+....+..++.||+.||.|||+. +|+||||||+||||+.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~ 151 (321)
T cd05603 81 GELFFHLQ-----RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-E 151 (321)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-C
Confidence 99988873 335678888889999999999999984 99999999999999999999999999987532221 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ .+ .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~--------~~--~ 214 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-------MYDNILHK--------PL--Q 214 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-------HHHHHhcC--------CC--C
Confidence 2234568999999999999999999999999999999999999996432111 01111111 00 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMG 771 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~ 771 (839)
.+......+.+++.+|++.+|.+||+..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1222344577889999999999999764
No 117
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.5e-34 Score=304.44 Aligned_cols=255 Identities=27% Similarity=0.359 Sum_probs=190.2
Q ss_pred cccccCCCceEEEEEeCC---CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSLGD---GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999997643 45799998865432 23457889999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|.++|..........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 999999543222334567778889999999999999984 99999999999999999999999999997543322211
Q ss_pred -EEeeccccceeCcccccCC-------CCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 665 -VTMVRGTRGYLAPEWVSNR-------PITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 665 -~~~~~gt~~y~aPE~~~~~-------~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.....++..|+|||++... .++.++||||||+++|||++ |+.||......+.. .....+....+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-------~~~~~~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL-------TYTVREQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH-------HHHhhcccCCC
Confidence 1234467889999988642 35789999999999999996 99999643221110 00000111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.++.+... ....+.+++..|+ .+|++||++.+|+..|+
T Consensus 231 ~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222111 1223556667798 58999999999999885
No 118
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.4e-35 Score=309.01 Aligned_cols=255 Identities=26% Similarity=0.404 Sum_probs=195.9
Q ss_pred cccccccCCCceEEEEEeCCC-c--EEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------CceE
Q 038743 507 FAQLLGTGGFGSVYKGSLGDG-T--LVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNRL 575 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~-~--~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~ 575 (839)
+.++||+|+||.||+|...+. + .||+|.++... ......+.+|++++..++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 567899999999999987543 2 69999886532 23345788999999999999999999987432 3568
Q ss_pred EEEeeccCCChhhhcccCC-CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 576 LVYEFMKNGSLDKWIFPSY-HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++|||+++|+|.+++.... ......+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence 9999999999999874321 12335688999999999999999999984 9999999999999999999999999999
Q ss_pred eecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 655 KLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 655 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
+.+....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~~~~~~~~~ 232 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-------IYDYLRQGNR 232 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHcCCC
Confidence 8764332211 122345678999999999999999999999999999999 788886432211 1111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.. ........+.+++.+||+.+|++||++.+|++.|+..
T Consensus 233 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 LK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 1112234578899999999999999999999999763
No 119
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.3e-35 Score=308.16 Aligned_cols=255 Identities=25% Similarity=0.469 Sum_probs=199.3
Q ss_pred HhhccccccccCCCceEEEEEeCC-C---cEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGD-G---TLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
..+.+.+.||+|+||.||+|.... + ..||||.+.... .....+|..|+.++++++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 456778999999999999997643 3 369999987542 23346799999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++++|.+++.. ....+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 84 TEFMENGALDSFLRQ----NDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EecCCCCcHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 999999999999842 234688999999999999999999985 9999999999999999999999999999865
Q ss_pred CCCCcee--EEeec--cccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 658 GREHSQV--VTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 658 ~~~~~~~--~~~~~--gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
....... ..... .+..|+|||.+.+..++.++||||||+++||+++ |..||....... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-------~~~~i~~~-- 227 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VINAIEQD-- 227 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcC--
Confidence 4322211 11111 2457999999999999999999999999999886 999986432111 00111000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+.+....+.+++..||+.+|++||+|.+|+.+|+..
T Consensus 228 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 -------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00011112234577889999999999999999999998753
No 120
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=302.01 Aligned_cols=258 Identities=24% Similarity=0.303 Sum_probs=188.6
Q ss_pred ccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCC-----ceEEEEeec
Q 038743 508 AQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-----NRLLVYEFM 581 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lv~e~~ 581 (839)
.+++|.|+||.||+|.+. +++.||||+.-... +.--+|+.+|+.+.|||||+|+-++.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 468999999999999874 47899999874332 23347899999999999999998885432 345899999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC-CceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~-~~~kl~DfGla~~~~~~ 660 (839)
|. +|..++..- ...+..++...+.-+..||.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+.+...
T Consensus 105 P~-tL~~~~r~~-~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 105 PE-TLYRVIRHY-TRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred hH-HHHHHHHHH-hhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 87 888888431 12345677777888999999999999995 99999999999999965 99999999999988655
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhh-----hhhhccCcc--
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWA-----FKEMTNGTP-- 732 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~-- 732 (839)
..... ..-|+-|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+...........-+ .+.+.....
T Consensus 180 epniS--YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y 257 (364)
T KOG0658|consen 180 EPNIS--YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY 257 (364)
T ss_pred CCcee--EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence 44432 235788999999887 57999999999999999999999999765432211000000 011111110
Q ss_pred cccccccccC-----CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 733 LKVADRRLEG-----AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 733 ~~~~~~~l~~-----~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+...+.+.. -.........++++.++++.+|.+|.++.|++..
T Consensus 258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0111111111 1222344567888889999999999999988754
No 121
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.4e-35 Score=315.87 Aligned_cols=242 Identities=22% Similarity=0.281 Sum_probs=191.1
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||+|+.. +++.||||++.... ......+..|.+++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999764 57899999986532 22334577888888866 899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~ 151 (321)
T cd05591 81 GDLMFQIQ-----RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-V 151 (321)
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-c
Confidence 99998883 335688999999999999999999995 99999999999999999999999999997543222 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......+.. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-------~~~~i~~~~~------~---- 214 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-------LFESILHDDV------L---- 214 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC------C----
Confidence 2234568999999999999999999999999999999999999997443211 1111111110 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCC-------CHHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRP-------SMGEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RP-------t~~~v~~~ 776 (839)
.+......+.+++..|++.+|++|| ++.++++.
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 0111224567788889999999999 77777644
No 122
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-34 Score=310.88 Aligned_cols=264 Identities=23% Similarity=0.350 Sum_probs=201.1
Q ss_pred HhhccccccccCCCceEEEEEeCC-----------------CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGD-----------------GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRL 564 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 564 (839)
..+.+.+.||+|+||.||++...+ +..||+|.+..... ....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 456778999999999999987642 24689999865432 335678899999999999999999
Q ss_pred cceeecCCceEEEEeeccCCChhhhcccCCCC------CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH------RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 565 ~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
++++......++++||+++++|.++|...... ....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence 99999999999999999999999998543211 223689999999999999999999985 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh--CCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG--GRRNLDMSGDAE 715 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt--G~~p~~~~~~~~ 715 (839)
+++.++.++|+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|+.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence 9999999999999999865432221 2233446788999999998889999999999999999998 667775322111
Q ss_pred CccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
. ............. ......+......+.+++.+|++.+|++||+|.+|++.|+
T Consensus 242 ~---~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 242 V---IENAGHFFRDDGR------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H---HHHHHhccccccc------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 0000000000000 0000111122356889999999999999999999999986
No 123
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-34 Score=307.05 Aligned_cols=255 Identities=25% Similarity=0.448 Sum_probs=200.5
Q ss_pred HhhccccccccCCCceEEEEEeC----CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
..+.+.+.||+|+||.||+|... .+..+|+|.++.... ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45667889999999999999763 234799999865332 2345789999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +++||||||+|||++.++.++|+|||++..+
T Consensus 84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 84 TEYMENGSLDAFLRK----HDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 999999999999842 234688999999999999999999985 9999999999999999999999999999876
Q ss_pred CCCCceeEEe--eccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 658 GREHSQVVTM--VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 658 ~~~~~~~~~~--~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
.......... ..++..|+|||++.+..++.++||||||+++||+++ |+.||......+. .....++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~-------~~~~~~~~--- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV-------IKAIEEGY--- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH-------HHHHhCCC---
Confidence 5433222221 223568999999999899999999999999999886 9999864322110 11111110
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...........+.+++.+|++.+|.+||+|.++++.|+..
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 ------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011112234577899999999999999999999999763
No 124
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1e-34 Score=311.85 Aligned_cols=265 Identities=20% Similarity=0.323 Sum_probs=198.4
Q ss_pred HHhhccccccccCCCceEEEEEeCC---------------CcEEEEEEecccC-CcchHHHHHHHHHhhccccCCccccc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGD---------------GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLC 565 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 565 (839)
...+.+.+.||+|+||.||++.... ...||+|.++... ......+.+|++++.+++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4466778899999999999986532 2358999986542 22345689999999999999999999
Q ss_pred ceeecCCceEEEEeeccCCChhhhcccCCC-------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 566 GYCSEGSNRLLVYEFMKNGSLDKWIFPSYH-------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 566 g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
+++......++||||+++++|.+++..... .....+++..++.++.|++.||+|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999999843210 1112468889999999999999999985 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh--CCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG--GRRNLDMSGDAE 715 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt--G~~p~~~~~~~~ 715 (839)
++++++.+||+|||++......... ......++..|+|||.+.+..++.++||||||++++||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999765332211 1222345778999999998899999999999999999998 556665332211
Q ss_pred CccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
. .....+..... ........+......+.+++.+|++.+|++||+|.+|++.|+
T Consensus 241 ~---~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 V---IENTGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred H---HHHHHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0 00000000000 000000111122357889999999999999999999999986
No 125
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-34 Score=314.88 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=190.4
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++.. .+++.||+|++++... ...+.+..|+.++.++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999976 4578999999975422 2234578899998888 699999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~-----~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 151 (327)
T cd05617 81 GDLMFHMQ-----RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-D 151 (327)
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-C
Confidence 99998873 335689999999999999999999995 99999999999999999999999999997532211 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.............+..+....... .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~--- 222 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI------RI--- 222 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC------CC---
Confidence 233456999999999999999999999999999999999999999654332222112222222211110 11
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
+......+.+++.+|++.+|.+||++
T Consensus 223 -p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 -PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred -CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11123446788888999999999984
No 126
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.4e-35 Score=320.82 Aligned_cols=251 Identities=20% Similarity=0.235 Sum_probs=196.5
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||+||++.. .+++.||+|+++.... ...+.+.+|+.++..++|+||+++++++.+....++||||
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY 82 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence 56778999999999999976 4689999999965322 2345688899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~~~~L~~~l~~----~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 83 QPGGDLLSLLNR----YEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999842 234688999999999999999999995 9999999999999999999999999999876544
Q ss_pred CceeEEeeccccceeCccccc------CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVS------NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~------~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+.... .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~--~ 226 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-------TYNNIMNFQ--R 226 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-------HHHHHHcCC--C
Confidence 433334456899999999986 4567899999999999999999999996433211 011111100 0
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
... ..........+.+++..|++ +|.+||++.++++.
T Consensus 227 ~~~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 FLK----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ccC----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 00011123345667777897 99999999998753
No 127
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.5e-35 Score=320.02 Aligned_cols=238 Identities=25% Similarity=0.308 Sum_probs=190.3
Q ss_pred cccccCCCceEEEEEe----CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 509 QLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.||+|+||.||++.. .+|+.||+|++..... .....+..|++++.+++||||+++++++.+....++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999864 3688999999965321 223457789999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~-----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 82 GGDLFTRLS-----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 999999883 334689999999999999999999995 999999999999999999999999999986543222
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ..........
T Consensus 154 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-------~~~~i~~~~~---------- 215 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-------TMTMILKAKL---------- 215 (318)
T ss_pred -ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-------HHHHHHcCCC----------
Confidence 2334568999999999999889999999999999999999999996432111 0111111110
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGE 772 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~ 772 (839)
..+......+.+++.+||+.+|++||++.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111122345667888899999999999665
No 128
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.3e-35 Score=333.92 Aligned_cols=254 Identities=25% Similarity=0.311 Sum_probs=199.0
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC-------
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS------- 572 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------- 572 (839)
..|.+.+.||+|+||+||+++. .+++.||||++.... ......+.+|+..+..++|+||+++...+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 4677889999999999999965 578999999986432 233456889999999999999999887765432
Q ss_pred -ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 573 -NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 573 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
..++||||+++|+|.++|.... .....+++..+..++.|++.||.|||+. +|+||||||+||||+.++.+||+||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~-~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRA-KTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEec
Confidence 3679999999999999985432 2345788999999999999999999995 9999999999999999999999999
Q ss_pred CcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 652 GLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 652 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
|+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .......+
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~-------~~~~~~~~ 260 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE-------VMHKTLAG 260 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHhcC
Confidence 999876433222 2234569999999999999999999999999999999999999996432111 11111111
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.. + ..+......+.+++.+||+.+|.+||++.++++.
T Consensus 261 ~~----~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RY----D-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC----C-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 10 0 1112233457788889999999999999999864
No 129
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-35 Score=322.87 Aligned_cols=263 Identities=20% Similarity=0.281 Sum_probs=192.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC-----CceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG-----SNRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~l 576 (839)
|.+.++||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 55678999999999999975 468999999986432 22345688999999999999999999987543 34799
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
||||+. ++|.+++. ....+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 82 v~e~~~-~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 82 VFELME-SDLHQVIK-----ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEecCC-CCHHHHHH-----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 999995 68988883 334689999999999999999999995 999999999999999999999999999986
Q ss_pred cCCCCce--eEEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhhh
Q 038743 657 MGREHSQ--VVTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWAF 724 (839)
Q Consensus 657 ~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~~ 724 (839)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... +....
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 4322211 1234568999999999876 6789999999999999999999999965432110000 00000
Q ss_pred hhhccCcccccc---cccccCCCC---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 725 KEMTNGTPLKVA---DRRLEGAVE---EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 725 ~~~~~~~~~~~~---~~~l~~~~~---~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+........+ .+....... ......+.+++.+||+.+|++||+++++++.
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000 000000000 0112356788999999999999999999865
No 130
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.5e-35 Score=313.18 Aligned_cols=262 Identities=25% Similarity=0.398 Sum_probs=200.0
Q ss_pred hhccccccccCCCceEEEEEeCC-Cc--EEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGD-GT--LVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+.+.+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|+.++.++ +||||+++++++.+....++++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 35677899999999999997743 33 57888886432 23345788999999999 7999999999999999999999
Q ss_pred eeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCcee
Q 038743 579 EFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~k 647 (839)
||+++++|.+++..... .....+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+|
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEE
Confidence 99999999999854211 1123588899999999999999999984 999999999999999999999
Q ss_pred ecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhh
Q 038743 648 VSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 648 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
|+|||++...... ........+..|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 160 l~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------~~~~ 230 (297)
T cd05089 160 IADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------LYEK 230 (297)
T ss_pred ECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHH
Confidence 9999998643211 11111223567999999999899999999999999999997 999986432111 1111
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCCCC
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADINTP 786 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~~p 786 (839)
...+ .....+......+.+++.+|++.+|.+||++.++++.|+.......+
T Consensus 231 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 231 LPQG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111 01111112234577899999999999999999999999876654433
No 131
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-35 Score=313.93 Aligned_cols=258 Identities=25% Similarity=0.382 Sum_probs=205.9
Q ss_pred ccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChhh
Q 038743 510 LLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDK 588 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~ 588 (839)
+||+|.||+||-|+. .+...+|||-+.........-+..|+.+-++|+|.|||+++|.|.++...-+.||.++||+|..
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 899999999999965 4566899999976655556678999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCcccC--ChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC-CCCceeecccCcceecCCCCceeE
Q 038743 589 WIFPSYHHRDRVL--DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKLMGREHSQVV 665 (839)
Q Consensus 589 ~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~ 665 (839)
+|... =.++ ++.++-.+..||++||.|||+ +.|+|||||-.||||+ -.|.+||+|||-++.+..-. ...
T Consensus 662 LLrsk----WGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~T 733 (1226)
T KOG4279|consen 662 LLRSK----WGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCT 733 (1226)
T ss_pred HHHhc----cCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCC-ccc
Confidence 99432 2344 677788889999999999999 4999999999999996 57899999999998764322 223
Q ss_pred EeeccccceeCcccccCC--CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 666 TMVRGTRGYLAPEWVSNR--PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~~--~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
....||..|||||++..+ .|..++|||||||.+.||.||++||-..+..... +..+---...+.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--------------MFkVGmyKvHP~ 799 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--------------MFKVGMYKVHPP 799 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--------------hhhhcceecCCC
Confidence 456699999999999764 5899999999999999999999999654432211 011111223345
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--hcCCCCCCCCCCc
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM--LEGSADINTPPMP 789 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~--L~~~~~~~~p~~p 789 (839)
++.+....+..++++|+.++|.+||+++++++- |+-....+.|+.+
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~ls 847 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKLS 847 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCCC
Confidence 677778888999999999999999999999753 3333333444443
No 132
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.6e-35 Score=314.29 Aligned_cols=265 Identities=24% Similarity=0.353 Sum_probs=205.2
Q ss_pred HHHHhhccccccccCCCceEEEEEe--------CCCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceee
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSL--------GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCS 569 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~--------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~ 569 (839)
+....+.+.+.||+|+||.||++.. .++..||+|.+.... .....++.+|+.++..+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 4455677889999999999999964 134579999986542 23346789999999999 8999999999999
Q ss_pred cCCceEEEEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 570 EGSNRLLVYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 570 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
.....++||||+++|+|.++|..... .....+++..+..++.||++||.|||+. +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999854311 1124578889999999999999999984 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAED 716 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~ 716 (839)
|+++++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..|+......+
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~- 247 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 247 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-
Confidence 99999999999999998764332221 222345678999999999899999999999999999998 777775322111
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADI 783 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~ 783 (839)
..+.+..+.. ...+......+.+++.+||+.+|++||+|.+|++.|++...+
T Consensus 248 ------~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 248 ------LFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred ------HHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111111110 011122345677889999999999999999999999876543
No 133
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.8e-35 Score=309.76 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=192.7
Q ss_pred cccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||+||++.. .+++.||+|.+..... .....+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999976 4688999999864321 2234578899999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
..++.... .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+..... ...
T Consensus 81 ~~~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~ 155 (280)
T cd05608 81 RYHIYNVD-EENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTK 155 (280)
T ss_pred HHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccc
Confidence 98874321 2345689999999999999999999995 999999999999999999999999999986543222 123
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..... .+..... ..+.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~-------~~~~~----~~~~~~~--~~~~ 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-------KELKQ----RILNDSV--TYPD 222 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH-------HHHHH----hhcccCC--CCcc
Confidence 346899999999999999999999999999999999999999643321100 00000 0001100 1122
Q ss_pred HHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRP-----SMGEVVK 775 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~ 775 (839)
.....+.+++..|++.+|++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 2345577888899999999999 6666665
No 134
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.2e-34 Score=304.39 Aligned_cols=251 Identities=26% Similarity=0.458 Sum_probs=200.2
Q ss_pred hhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.+.+.||+|+||.||++...+++.+|+|.+... .....++..|++++.+++|||++++++++......++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 45677899999999999998877889999998644 23356799999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++.. ....+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+||+|||+++........
T Consensus 84 ~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 84 GCLSDYLRA----QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 999998842 234578899999999999999999985 8999999999999999999999999999865433222
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++.+|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..+ .....+.
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~--~~~~~~~--- 224 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-------VVETINAG--FRLYKPR--- 224 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHhCC--CCCCCCC---
Confidence 2222235678999999998899999999999999999998 999986432111 01111111 0011111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.....+.+++.+||+.+|++||+|.+|++.|.
T Consensus 225 ----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12356888999999999999999999999873
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-34 Score=308.65 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=197.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+...++||+|+||.||++.. .+++.||||++.... ......+.+|+.++++++||||+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 45678999999999999976 468999999986432 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 82 MNGGDLKFHIYNM---GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred cCCCcHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 9999999888432 234689999999999999999999994 9999999999999999999999999999875432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. .....|+..|+|||++.+..++.++||||||+++|||++|+.||......... ......+.. .
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~----------~ 220 (285)
T cd05605 156 ET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKE----------D 220 (285)
T ss_pred Cc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhh----------c
Confidence 21 22345899999999999889999999999999999999999999753321100 000000000 0
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
....+......+.+++..|++.+|.+|| ++.++++.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 1112223445677889999999999999 77787553
No 136
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.7e-35 Score=309.00 Aligned_cols=260 Identities=25% Similarity=0.378 Sum_probs=202.7
Q ss_pred HHHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCc
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 573 (839)
....+.+.+.||+|+||.||+|... .+..||+|.+..... ....++.+|+.++..++||||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 3445667789999999999999763 246899999864432 334578899999999999999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCC-----CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceee
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHH-----RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKV 648 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl 648 (839)
.++||||+++|+|.+++...... ....+++..++.++.||+.||.|||+ .+++||||||+|||+++++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEE
Confidence 99999999999999998543211 12357889999999999999999998 49999999999999999999999
Q ss_pred cccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhh
Q 038743 649 SDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 649 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
+|||+++........ ......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ ..+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~~~~ 233 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-------VLKF 233 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-------HHHH
Confidence 999999865433221 1223346788999999998889999999999999999998 888885432211 1111
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+... ..+......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 234 VIDGGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1111110 1111224567889999999999999999999999863
No 137
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-34 Score=314.91 Aligned_cols=236 Identities=25% Similarity=0.327 Sum_probs=187.9
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||+++.. +++.||||++.+.. ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 58899999986432 23345677888888776 799999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~-----~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~ 151 (320)
T cd05590 81 GDLMFHIQ-----KSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-K 151 (320)
T ss_pred chHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-C
Confidence 99998884 335688999999999999999999985 99999999999999999999999999987542221 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..+.. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~~----------~ 214 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-------LFEAILNDEV----------V 214 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-------HHHHHhcCCC----------C
Confidence 2334568999999999999999999999999999999999999997433211 1111111110 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
.+......+.+++.+|++.+|.+||++
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 111123456788889999999999998
No 138
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-34 Score=319.37 Aligned_cols=199 Identities=25% Similarity=0.338 Sum_probs=170.7
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||+||++.. .+++.||||++.+.. ......+..|+.++.+++|+||+++++.+.+....++||||
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~ 82 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEF 82 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcC
Confidence 45678999999999999966 468999999996532 12234678899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 83 LPGGDMMTLLM-----KKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 99999999984 345789999999999999999999995 9999999999999999999999999999754321
Q ss_pred Cc----------------------------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCC
Q 038743 661 HS----------------------------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRR 706 (839)
Q Consensus 661 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~ 706 (839)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 00123469999999999999999999999999999999999999
Q ss_pred CCCCC
Q 038743 707 NLDMS 711 (839)
Q Consensus 707 p~~~~ 711 (839)
||...
T Consensus 235 Pf~~~ 239 (363)
T cd05628 235 PFCSE 239 (363)
T ss_pred CCCCC
Confidence 99643
No 139
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.3e-35 Score=319.16 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=198.4
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCC-cchHHHHHHHHHhhcc-ccCCcccccceeecC-C
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG-S 572 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~ 572 (839)
...+.+.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45677889999999999999963 3578999999965432 2345688999999999 789999999988654 5
Q ss_pred ceEEEEeeccCCChhhhcccCCCC--------------------------------------------------------
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHH-------------------------------------------------------- 596 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 596 (839)
..+++|||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999988532100
Q ss_pred ------CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce-eEEeec
Q 038743 597 ------RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ-VVTMVR 669 (839)
Q Consensus 597 ------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~ 669 (839)
....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 013467888899999999999999985 9999999999999999999999999999865332211 122234
Q ss_pred cccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHH
Q 038743 670 GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEE 748 (839)
Q Consensus 670 gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 748 (839)
++..|+|||.+.+..++.++||||||+++|||++ |..||........ .......+... ..+...
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~~---------~~~~~~ 307 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRM---------RAPDYT 307 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH------HHHHHhccCCC---------CCCCCC
Confidence 5678999999999999999999999999999997 8888854321110 01111111100 001111
Q ss_pred HHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 749 LMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 749 ~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
...+.+++..||+.+|++||++.+|++.|+...
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 235788899999999999999999999997643
No 140
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-34 Score=313.87 Aligned_cols=241 Identities=23% Similarity=0.315 Sum_probs=189.2
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||+||+|... +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999774 57899999996532 22334566777777764 899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++. ....+++.+...++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 151 (316)
T cd05619 81 GDLMFHIQ-----SCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-A 151 (316)
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-C
Confidence 99999883 234688899999999999999999995 99999999999999999999999999997532211 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+... .+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~------~~~~--- 215 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-------LFQSIRMD------NPCY--- 215 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhC------CCCC---
Confidence 2234568999999999999999999999999999999999999996432111 11111110 0111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMG-EVVK 775 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~-~v~~ 775 (839)
+......+.+++.+|++.+|.+||++. ++.+
T Consensus 216 -~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 -PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111233467888899999999999997 5543
No 141
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-34 Score=304.25 Aligned_cols=240 Identities=24% Similarity=0.370 Sum_probs=187.3
Q ss_pred cccccCCCceEEEEEeCC-------------CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 509 QLLGTGGFGSVYKGSLGD-------------GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
+.||+|+||.||+|...+ ...|++|.+..........+.+|+.++..++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997532 2358999886654444557889999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCc-------eee
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC-------PKV 648 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~-------~kl 648 (839)
+||||+++|+|..++.. ....+++..++.++.||++||+|||+. +|+||||||+|||++.++. +|+
T Consensus 81 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR----KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 99999999999988842 234689999999999999999999984 9999999999999987664 899
Q ss_pred cccCcceecCCCCceeEEeeccccceeCccccc-CCCCCCcccEEehhHHHHHHH-hCCCCCCCCCCCCCccchhhhhhh
Q 038743 649 SDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVS-NRPITVKADVYSYGMLLLEIV-GGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 649 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DV~S~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
+|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ .|+.|+......+. ..
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--------~~ 220 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--------ER 220 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--------HH
Confidence 999998754322 1234778899999886 567899999999999999998 57777753221110 00
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
...+.. . . .......+.+++.+||+.+|.+||++.++++.|+
T Consensus 221 ~~~~~~-~-----~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 221 FYEGQC-M-----L----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHhcCc-c-----C----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 001000 0 0 0112345678889999999999999999998763
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.3e-34 Score=304.35 Aligned_cols=249 Identities=27% Similarity=0.435 Sum_probs=201.6
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.+.||+|+||.||++.. .|+.||+|.+..... ..+++.+|+.++.+++|+||+++++++.+....++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 4566788999999999999987 478999999976533 46689999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 84 KGSLVDYLRSR---GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 99999998432 223689999999999999999999995 999999999999999999999999999986632211
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
....+..|+|||.+....++.++||||||++++|+++ |+.||....... .......+. .
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------~ 217 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPHVEKGY---------R 217 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhcCC---------C
Confidence 2234667999999998889999999999999999997 998885332110 111111110 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...+......+.+++.+|++.+|++||++.+++++|+.
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 218 MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 11112234567888999999999999999999999975
No 143
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-34 Score=308.66 Aligned_cols=257 Identities=26% Similarity=0.356 Sum_probs=197.9
Q ss_pred HhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
..+.+.+.||+|+||.||+|... .+..||+|.+..... .....+..|+.++++++|+||+++++++.+....+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 34566789999999999999774 356899998864432 23456899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCC--CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC---ceeecc
Q 038743 576 LVYEFMKNGSLDKWIFPSYH--HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF---CPKVSD 650 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~---~~kl~D 650 (839)
+||||+++++|.+++..... .....+++..++.++.||+.||+|||+. +++||||||+|||++.++ .+||+|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999854321 1223689999999999999999999995 899999999999998654 699999
Q ss_pred cCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhc
Q 038743 651 FGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMT 728 (839)
Q Consensus 651 fGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 728 (839)
||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||......+. .....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-------~~~~~ 235 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-------MEFVT 235 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHH
Confidence 99998763322111 112223568999999999999999999999999999997 9999864322110 01111
Q ss_pred cCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 729 NGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 729 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
... ....+......+.+++.+|++.+|++||++.+|++.|+
T Consensus 236 ~~~---------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 GGG---------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCC---------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 000 01111222356778899999999999999999999886
No 144
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-34 Score=315.91 Aligned_cols=243 Identities=25% Similarity=0.326 Sum_probs=189.5
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHh---hccccCCcccccceeecCCceEEEE
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTI---GSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+.+.||+|+||.||++.. .+++.||||++++.. ....+.+..|++++ ..++||||+++++++......++||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 4568899999999999976 468999999996432 22234566666554 5678999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++|+|..++. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 82 E~~~~~~L~~~~~------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 82 EYAAGGDLMMHIH------TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred cCCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999988873 34689999999999999999999995 99999999999999999999999999987532
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ....+..+. .
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-------~~~~i~~~~------~ 218 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-------VFDSIVNDE------V 218 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC------C
Confidence 221 12234568999999999999999999999999999999999999996432211 011111111 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPS-----MGEVVK 775 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~ 775 (839)
.. +......+.+++.+|++.+|.+||+ +.++++
T Consensus 219 ~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 RY----PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CC----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11 1112345678889999999999994 555554
No 145
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-34 Score=308.34 Aligned_cols=262 Identities=20% Similarity=0.317 Sum_probs=199.8
Q ss_pred HhhccccccccCCCceEEEEEe-----CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecC--Cce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-----GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNR 574 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~ 574 (839)
.++.+.+.||+|+||.||++++ .++..||+|.++... ......+.+|+.++++++||||+++.+++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4456678899999999999974 357899999986543 22345789999999999999999999998775 568
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+++++|.+++.. ....+++..++.++.||+.||+|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPR----NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEEccCCCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccc
Confidence 999999999999999842 22368999999999999999999998 49999999999999999999999999999
Q ss_pred eecCCCCce--eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCC-C-------ccchhhhh
Q 038743 655 KLMGREHSQ--VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE-D-------FFYPGWAF 724 (839)
Q Consensus 655 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~-~-------~~~~~~~~ 724 (839)
+.+...... ......++..|+|||++.+..++.++||||||+++|||++++.|........ . ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876433221 1223456778999999998889999999999999999999887653221100 0 00000000
Q ss_pred hhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 725 KEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 725 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+. ...........+.+++.+|++.+|++||++.++++.|+..
T Consensus 237 ~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0011110 0111122345788899999999999999999999999764
No 146
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.2e-34 Score=312.17 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=201.2
Q ss_pred HHhhccccccccCCCceEEEEEe------CCCcEEEEEEecccCC-cchHHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
...+.+.+.||+|+||.||++.. ..+..||||+++.... .....+.+|+.+++++ +||||+++++++.....
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 34567788999999999999964 2345899999875432 2235688999999999 79999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++|+|.+++... ....+++.++..++.||+.||+|||+. +|+|+||||+|||++.++.+||+|||+
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK---RESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 99999999999999998432 223489999999999999999999984 999999999999999999999999999
Q ss_pred ceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 654 AKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 654 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
++.+....... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......... ......+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~------~~~~~~~~ 261 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF------YKLIKEGY 261 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH------HHHHHcCC
Confidence 98654332211 122345778999999999999999999999999999998 99998643321110 01111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
....+......+.+++.+|++.+|++||++.+|++.|+.
T Consensus 262 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 262 ---------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred ---------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 001111123467889999999999999999999999975
No 147
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.5e-34 Score=307.92 Aligned_cols=258 Identities=26% Similarity=0.390 Sum_probs=199.4
Q ss_pred HHhhccccccccCCCceEEEEEe-CCCc----EEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-GDGT----LVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
...+.+.++||+|+||+||+|+. .+++ .||+|+++.... ....++.+|+.++..++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 34456678999999999999975 4454 489999865432 335678899999999999999999999875 4578
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+++||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 85 l~~~~~~~g~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 85 LVTQLMPYGCLLDYVRE----NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEcCCCCCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 99999999999999843 234688999999999999999999994 99999999999999999999999999998
Q ss_pred ecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 656 LMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 656 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
.+....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||+...... +. ..+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~- 229 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IP----DLLEKGER- 229 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHHCCCc-
Confidence 765432221 112235678999999999999999999999999999998 888886432111 00 01111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCC
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADI 783 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~ 783 (839)
...+......+.+++..||+.+|++||++.++++.|+.....
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 230 --------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 011112334577889999999999999999999999766443
No 148
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-34 Score=302.08 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=201.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEeccc--CCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|++|.||++.. .+++.|++|.+... ......++.+|++++++++||||+++++++.+....++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 45678999999999999976 46899999998543 2334567889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||+++.+....
T Consensus 82 ~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 82 ENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999998532 24578899999999999999999998 499999999999999999999999999998765432
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ......|++.|+|||++.+..++.++||||||++++||++|+.||...... ........+..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~--------- 218 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-------ALILKIIRGVF--------- 218 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCC---------
Confidence 2 123345788999999999999999999999999999999999999643311 01111111110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+......+.+++.+||+.+|++||+|.++++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11122334568889999999999999999999763
No 149
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-34 Score=304.58 Aligned_cols=255 Identities=22% Similarity=0.272 Sum_probs=199.0
Q ss_pred HHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
...+.+.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++.+++||||+++++.+..+...++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34567788999999999999976 57889999999755444456788999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 88 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 88 CGGGSLQDIYH-----VTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 99999999884 234678999999999999999999985 9999999999999999999999999999866432
Q ss_pred CceeEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
.. ......|+..|+|||.+. ...++.++||||||+++|||++|+.|+......+... ..... ....
T Consensus 160 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~~~---~~~~ 228 (267)
T cd06646 160 IA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMSKS---NFQP 228 (267)
T ss_pred cc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eeecC---CCCC
Confidence 21 122345888999999884 3457889999999999999999999985332211100 00000 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
+.... .......+.+++.+||+.+|++||+++++++.|
T Consensus 229 ~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 229 PKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11100 112234677888999999999999999998754
No 150
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.6e-34 Score=307.92 Aligned_cols=260 Identities=23% Similarity=0.310 Sum_probs=202.9
Q ss_pred HHhhccccccccCCCceEEEEEeCC-----CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeec-CCce
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGD-----GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-GSNR 574 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~ 574 (839)
...+.+.++||+|+||.||+|...+ +..|++|++..... .....+.+|+.++.+++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4456778899999999999998755 78899999865432 234568899999999999999999998766 5778
Q ss_pred EEEEeeccCCChhhhcccCCCC---CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHH---RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
++++||+++++|.++|...... ....+++.++..++.||+.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998543111 125689999999999999999999984 9999999999999999999999999
Q ss_pred CcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 652 GLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 652 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
|+++.+....... .....++..|+|||++.+..++.++||||||+++||+++ |+.||......+ + ...+..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~ 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---M----AAYLKD 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---H----HHHHHc
Confidence 9998664333222 122346778999999998899999999999999999998 999986432111 0 011111
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+. ...........+.+++.+||+.+|++||++.+|+++|+..
T Consensus 235 ~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 235 GY---------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CC---------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 10 0001111234578899999999999999999999999764
No 151
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-34 Score=304.88 Aligned_cols=259 Identities=20% Similarity=0.327 Sum_probs=203.0
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+++++.++||||+++++++.+....++++|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 456788999999999999976 478999999875422 2223468899999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++.... .....++...+..++.||+.||+|||+. +++|+||||+||+++.++.++|+|||++..+..
T Consensus 83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 83 LADAGDLSQMIKYFK-KQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCcHHHHHHHhh-hccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999998884321 1334678889999999999999999984 999999999999999999999999999987643
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.... .....+++.|+|||.+.+..++.++||||||+++|||++|+.||....... ..+. ..+.... .+
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~----~~~~-~~~~~~~-----~~- 226 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----FSLC-QKIEQCD-----YP- 226 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH----HHHH-HHHhcCC-----CC-
Confidence 2221 123458889999999998889999999999999999999999985332110 0000 1111000 01
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..........+.+++.+||+.+|++||++.+|++.|+..
T Consensus 227 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 227 --PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 111123345678889999999999999999999999764
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.6e-34 Score=311.48 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=197.9
Q ss_pred HHhhccccccccCCCceEEEEEeC-CCc--EEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG-DGT--LVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 576 (839)
...+.+.+.||+|+||.||+|... ++. .+|+|.+.... .....++.+|++++.++ +||||+++++++.+....++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 345667889999999999999764 444 46888776432 23345788999999999 89999999999999999999
Q ss_pred EEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCc
Q 038743 577 VYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC 645 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~ 645 (839)
||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+. +++||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999854321 1123688999999999999999999984 9999999999999999999
Q ss_pred eeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhh
Q 038743 646 PKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAF 724 (839)
Q Consensus 646 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 724 (839)
+||+|||+++...... ......++..|+|||++.+..++.++||||||+++|||++ |..||......+ ..
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LY 233 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-------HH
Confidence 9999999986422111 1111234667999999988889999999999999999998 999986432211 01
Q ss_pred hhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 725 KEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 725 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.....+. ....+......+.+++.+|++.+|++||++.+++++|+..
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 234 EKLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHhcCC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111110 0001111234577899999999999999999999998754
No 153
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.2e-34 Score=313.27 Aligned_cols=237 Identities=27% Similarity=0.354 Sum_probs=185.8
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHH-HhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVN-TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||+||+|.. .+++.||||++.... .....++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999977 468999999986432 122334555554 46778999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~ 151 (323)
T cd05575 81 GELFFHLQ-----RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-K 151 (323)
T ss_pred CCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-C
Confidence 99999883 345688889999999999999999995 99999999999999999999999999987532211 2
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .......+. ..+...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-------~~~~i~~~~------~~~~~~ 218 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-------MYDNILNKP------LRLKPN 218 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-------HHHHHHcCC------CCCCCC
Confidence 2334568999999999999999999999999999999999999996432111 011111111 011111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMG 771 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~ 771 (839)
....+.+++.+|++.+|.+||++.
T Consensus 219 ----~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 219 ----ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 234577888899999999999985
No 154
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-34 Score=309.10 Aligned_cols=265 Identities=21% Similarity=0.301 Sum_probs=199.2
Q ss_pred HhhccccccccCCCceEEEEEeC-----------------CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-----------------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRL 564 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 564 (839)
..+.+.+.||+|+||.||++... +...||+|++.... .....++.+|+.++..++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 34677889999999999998532 23479999987542 2334678999999999999999999
Q ss_pred cceeecCCceEEEEeeccCCChhhhcccCCCC------CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHH------RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 565 ~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
++++......++||||+++|+|.+++...... ....+++.++..++.||+.||+|||+. +++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998543211 123578889999999999999999995 899999999999
Q ss_pred EECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh--CCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG--GRRNLDMSGDAE 715 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt--G~~p~~~~~~~~ 715 (839)
|+++++.++|+|||+++.+....... .....++..|+|||....+.++.++||||||+++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999998653322211 122334678999999888899999999999999999998 667775332211
Q ss_pred CccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.. ........... ..... ..+......+.+++.+||+.+|.+||+|.+|++.|+.
T Consensus 242 ~~---~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 VI---ENTGEFFRDQG-RQVYL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH---HHHHHHHhhcc-ccccC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 10 00000000000 00000 0111223567889999999999999999999999863
No 155
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.2e-34 Score=302.79 Aligned_cols=248 Identities=29% Similarity=0.438 Sum_probs=195.0
Q ss_pred cccccCCCceEEEEEeCC----CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||+|.... +..+|+|.+..... ...+++.+|+.+++++.||||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999996522 36899999875543 24567899999999999999999999876 4578999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.++|.. ...+++..+..++.|++.||+|||+. +++|+||||+|||++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKK-----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999943 23688999999999999999999985 8999999999999999999999999999876433222
Q ss_pred eE--EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 664 VV--TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 664 ~~--~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~------- 217 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-------VIAMLESGERL------- 217 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-------HHHHHHcCCcC-------
Confidence 11 11224568999999999999999999999999999998 999986432211 01111111100
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
..+......+.+++.+|++.+|++||++.+|++.|++..
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 111122346778999999999999999999999998753
No 156
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.4e-34 Score=304.79 Aligned_cols=251 Identities=26% Similarity=0.417 Sum_probs=193.6
Q ss_pred cccccCCCceEEEEEeCC-Cc--EEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLGD-GT--LVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||+|...+ +. .+|+|.+.... ......+.+|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 369999999999998744 43 57889886432 23345788999999999 899999999999999999999999999
Q ss_pred CChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 584 GSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 584 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
|+|.+++..... .....+++.++..++.|++.||+|||+ .+++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence 999999854311 122357899999999999999999998 499999999999999999999999999
Q ss_pred cceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 653 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
++...... ........+..|+|||++....++.++||||||++++||++ |+.||....... .......+.
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLPQGY 228 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-------HHHHHhCCC
Confidence 98632211 11112234567999999988899999999999999999997 999985432111 111111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...........+.+++.+|++.+|.+||++.++++.|+.+
T Consensus 229 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 ---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 0011112234577899999999999999999999999765
No 157
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.2e-34 Score=307.36 Aligned_cols=269 Identities=22% Similarity=0.327 Sum_probs=203.2
Q ss_pred HhhccccccccCCCceEEEEEeC-----CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeec--CCce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-----DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSE--GSNR 574 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~ 574 (839)
..+.+.+.||+|+||.||++.+. +++.||||.+...... ...++.+|+++++.++|+||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34556789999999999999863 3689999999765332 45679999999999999999999999877 6688
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
+++|||+++++|.+++... ...+++..+..++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 9999999999999999432 3368999999999999999999998 49999999999999999999999999999
Q ss_pred eecCCCCcee--EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-cchhhhhhhhccCc
Q 038743 655 KLMGREHSQV--VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-FYPGWAFKEMTNGT 731 (839)
Q Consensus 655 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 731 (839)
.......... .....++..|+|||.+.+..++.++||||||++++||++|+.|+......... ..+.. .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~ 234 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ--GQMIVTR 234 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccc--ccccHHH
Confidence 8765322211 11223556799999999889999999999999999999999988543221100 00000 0000000
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+.+........+......+.+++.+|++.+|++||+|.+|+++|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0111111111111222335688899999999999999999999999864
No 158
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.3e-34 Score=306.02 Aligned_cols=248 Identities=25% Similarity=0.336 Sum_probs=192.3
Q ss_pred cccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||.||++.. .+|+.+|+|.+.... ......+..|++++.+++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999976 468999999986422 12234566799999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
..++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~ 152 (277)
T cd05607 81 KYHIYNV---GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TIT 152 (277)
T ss_pred HHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eee
Confidence 9887432 334588999999999999999999994 99999999999999999999999999998764322 223
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...|+..|+|||++.+..++.++|||||||++|||++|+.||......... .. ........ .+... ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~-~~~~~~~~--------~~~~~-~~ 220 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EE-LKRRTLED--------EVKFE-HQ 220 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HH-HHHHhhcc--------ccccc-cc
Confidence 456899999999999988999999999999999999999998643221100 00 00000000 00000 01
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.....+.+++..||+.+|++||++.|+++.+.
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 12334678888899999999999988765443
No 159
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-34 Score=312.97 Aligned_cols=263 Identities=24% Similarity=0.339 Sum_probs=202.7
Q ss_pred HHHHhhccccccccCCCceEEEEEeC--------CCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceee
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLG--------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCS 569 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~ 569 (839)
+....+.+.+.||+|+||.||++... +...+|+|.+.... .....++..|+.++..+ +||||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 34456788899999999999999642 23579999997542 23345688899999999 7999999999999
Q ss_pred cCCceEEEEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 570 EGSNRLLVYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 570 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
.....++||||+++|+|.+++..... .....+++.++++++.||+.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999954311 1224588999999999999999999984 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAED 716 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~ 716 (839)
|++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~- 250 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE- 250 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-
Confidence 99999999999999997653321111 112234568999999999899999999999999999998 888885322110
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
.......+. ....+......+.+++..|++.+|++||+|.+|++.|+...
T Consensus 251 ------~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 251 ------LFKLLKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred ------HHHHHHcCC---------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 111111111 11112223456778899999999999999999999998643
No 160
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-34 Score=308.41 Aligned_cols=263 Identities=21% Similarity=0.250 Sum_probs=192.6
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 85 (303)
T cd07869 6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYV 85 (303)
T ss_pred cceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECC
Confidence 4667889999999999999774 688999999865432 22346788999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+ ++|.+++.. ....++...+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 86 H-TDLCQYMDK----HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred C-cCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 6 677777732 234578888999999999999999995 99999999999999999999999999997543222
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-c----------chhhhhhh---
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-F----------YPGWAFKE--- 726 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-~----------~~~~~~~~--- 726 (839)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||....+.... . ...|....
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 11223457899999998865 45889999999999999999999999754321100 0 00000000
Q ss_pred -hccCcccccccccccCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 727 -MTNGTPLKVADRRLEGAVE-EEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 727 -~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.............+....+ ......+.+++.+|++.+|.+|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000000000000 001235668888999999999999999975
No 161
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.3e-34 Score=303.16 Aligned_cols=259 Identities=20% Similarity=0.336 Sum_probs=203.6
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.+.||+|+||.||++.. .+++.+|||.+..... ....++.+|+.++..++||||+++++++.+....+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 456678999999999999975 5789999998864322 223578899999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++.... .....+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++..+..
T Consensus 83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 83 LADAGDLSRMIKHFK-KQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999884321 2345688999999999999999999985 999999999999999999999999999886643
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
... ......++..|+|||++.+..++.++||||||+++|||++|..||........ .. .+... ....+.
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~-~~~~~-----~~~~~~ 227 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY----SL-CKKIE-----QCDYPP 227 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH----HH-hhhhh-----cCCCCC
Confidence 222 12234588899999999998999999999999999999999999864321100 00 00100 000111
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
+ ........+.+++.+|++.+|++||||.+|++++++.
T Consensus 228 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 L---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred C---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1 1112345677888899999999999999999998753
No 162
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-34 Score=321.24 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=194.7
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCC-----ceEEE
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-----NRLLV 577 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lv 577 (839)
.+.+.||+|+||.||++.. .+++.||||++..... ...+++.+|++++..++||||+++++++.... ..++|
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 82 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV 82 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence 4567899999999999976 5789999999865322 23457889999999999999999999998776 78999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
+||+. ++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 83 ~e~~~-~~l~~~~~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 83 TELMQ-SDLHKIIV-----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred eeccc-cCHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 99997 57877773 345689999999999999999999995 9999999999999999999999999999876
Q ss_pred CCCCceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchh----------h----
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPG----------W---- 722 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~----------~---- 722 (839)
............+++.|+|||.+.+. .++.++|||||||++|||++|+.||............. +
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 44333333344578999999998774 57999999999999999999999997543221100000 0
Q ss_pred --hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 723 --AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 723 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+..... ..................+.+++.+|++.+|.+|||+.++++.
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPH-KPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCC-CCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000 0000000000111124567789999999999999999999874
No 163
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.5e-34 Score=306.97 Aligned_cols=239 Identities=24% Similarity=0.347 Sum_probs=185.8
Q ss_pred ccccCCCceEEEEEeCC-------------------------CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccc
Q 038743 510 LLGTGGFGSVYKGSLGD-------------------------GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRL 564 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l 564 (839)
.||+|+||.||+|.+.. ...||+|++.........++.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13589999865444444578899999999999999999
Q ss_pred cceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC
Q 038743 565 CGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF 644 (839)
Q Consensus 565 ~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~ 644 (839)
+++|.+....++||||+++|+|..++.. ....+++..++.++.||++||+|||+. +|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK----EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 9999999999999999999999998842 234688999999999999999999984 999999999999997643
Q ss_pred -------ceeecccCcceecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHH-hCCCCCCCCCCCC
Q 038743 645 -------CPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIV-GGRRNLDMSGDAE 715 (839)
Q Consensus 645 -------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~ell-tG~~p~~~~~~~~ 715 (839)
.+||+|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......+
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 4799999988643221 12246788999998875 56899999999999999995 7898886433211
Q ss_pred CccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.. . .... ...+... ....+.+++.+||+.+|++||+|.+|++.|.
T Consensus 230 ~~---~----~~~~-------~~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KE---R----FYEK-------KHRLPEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HH---H----HHHh-------ccCCCCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 10 0 0000 0001111 1235778899999999999999999999874
No 164
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-34 Score=321.17 Aligned_cols=250 Identities=21% Similarity=0.278 Sum_probs=192.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||+||+++. .+++.||||++.... ......+.+|+.++..++||||+++++++.+....++||||
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~ 82 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEY 82 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECC
Confidence 45678999999999999976 468999999996431 22334578899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 83 ~~~g~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 83 LPGGDMMTLLM-----KKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCcHHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999984 234689999999999999999999995 9999999999999999999999999999765321
Q ss_pred Cce-------------------------------------eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh
Q 038743 661 HSQ-------------------------------------VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG 703 (839)
Q Consensus 661 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt 703 (839)
... ......||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 100 0012358999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 038743 704 GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPS---MGEVVKM 776 (839)
Q Consensus 704 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt---~~~v~~~ 776 (839)
|+.||......+. ...+..... .+. .... ......+.+++.+|+. +|.+|++ +.++++.
T Consensus 235 G~~Pf~~~~~~~~-------~~~i~~~~~-~~~---~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 235 GYPPFCSDNPQET-------YRKIINWKE-TLQ---FPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCCHHHH-------HHHHHcCCC-ccC---CCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9999964332110 011100000 000 0000 0112345566666886 8999998 8888763
No 165
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-34 Score=304.45 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=187.7
Q ss_pred cccccCCCceEEEEEeCC---CcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSLGD---GTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||+|...+ ...+|+|.+..... ....++.+|+..++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997543 45788888754322 23456889999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|.++|...........++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999654322234456788899999999999999995 99999999999999999999999999987543222111
Q ss_pred -EEeeccccceeCcccccC-------CCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 665 -VTMVRGTRGYLAPEWVSN-------RPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 665 -~~~~~gt~~y~aPE~~~~-------~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||......+ ............+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~~~~~~~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-------VLKQVVREQDIKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhhccCccC
Confidence 122345678999998743 456889999999999999999 777875332111 0111111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
..+.+.. .....+.+++..|+ .+|++||++++|+++|.
T Consensus 231 ~~~~~~~----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQLDL----KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcccc----cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2222221 22234455666688 59999999999999874
No 166
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.8e-34 Score=301.16 Aligned_cols=258 Identities=21% Similarity=0.346 Sum_probs=205.1
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++|+||+++++++.+....++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 4667889999999999999875 78999999885321 2234578999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++... ......+++.++..++.+++.||+|||+. +|+||||+|+||+++.++.++|+|||++..+..
T Consensus 83 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 83 LADAGDLSRMIKHF-KKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred cCCCCCHHHHHHHh-cccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999988532 12345688999999999999999999995 999999999999999999999999999986543
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.... .....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ... ....+..+.
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~~~-------- 224 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYS-LCKKIEKCD-------- 224 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHH-HHhhhhcCC--------
Confidence 3221 22345888999999999889999999999999999999999998533211 000 001111110
Q ss_pred ccCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 740 LEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 740 l~~~~~~-~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
....+. .....+.+++.+|++.+|++||++.+|+++|+..
T Consensus 225 -~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 225 -YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred -CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 011111 3345677889999999999999999999999764
No 167
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.2e-34 Score=291.51 Aligned_cols=266 Identities=21% Similarity=0.277 Sum_probs=196.1
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhccccCC-cccccceeecCC------ce
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMN-LVRLCGYCSEGS------NR 574 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~------~~ 574 (839)
+...++||+|+||+||+|+. .+|+.||+|++.-.... ......+|+.++.+++|+| ||+|++++...+ ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 44456799999999999965 57899999999654332 2345789999999999999 999999998777 78
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
+||+||+.. +|..++...... ...++...+..++.||++||+|||++ +|+||||||+||||+++|.+||+|||+|
T Consensus 93 ~lvfe~~d~-DL~~ymd~~~~~-~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 93 YLVFEFLDR-DLKKYMDSLPKK-PQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEeecc-cHHHHHHhcccc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence 899999855 899998543211 14566688999999999999999996 9999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
+.+.-+.. ..+...+|..|.|||++.+. .|+...||||+|||+.||++++..|.+..+...............+..+.
T Consensus 168 ra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 168 RAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 97653322 23445588999999999886 79999999999999999999998887655422110000000000000000
Q ss_pred c---cccccc-----c--CCCCH---HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 734 K---VADRRL-----E--GAVEE---EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 734 ~---~~~~~l-----~--~~~~~---~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
. +.+-.. . ..... .......+++.+|++.+|.+|.+++..+++
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 001000 0 00001 111467788999999999999999999876
No 168
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.3e-34 Score=300.17 Aligned_cols=248 Identities=27% Similarity=0.416 Sum_probs=196.9
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChh
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
++||+|+||.||++...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999998877999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeE-E
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV-T 666 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~-~ 666 (839)
+++.. ....+++..++.++.+++.+|+|||+. +++||||||+|||++.++.+||+|||++........... .
T Consensus 81 ~~l~~----~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 81 TFLRK----KKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 99843 234678889999999999999999984 999999999999999999999999999986542211111 1
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCC
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVE 745 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 745 (839)
...++..|+|||.+.+..++.++||||||+++|||++ |..||....... ........ .....+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-------~~~~~~~~---------~~~~~~ 217 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-------TRERIESG---------YRMPAP 217 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-------HHHHHhcC---------CCCCCC
Confidence 2234567999999998899999999999999999999 788875432111 00111000 001111
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 746 EEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 746 ~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
......+.+++.+|++.+|++||++.||++.|+.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 2234467889999999999999999999999863
No 169
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.6e-34 Score=313.44 Aligned_cols=242 Identities=24% Similarity=0.314 Sum_probs=191.7
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++... +++.||||++++.. ......+..|.+++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999774 57899999996532 22344577888888877 799999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~L~~~~~-----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 151 (318)
T cd05570 81 GDLMFHIQ-----RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV- 151 (318)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-
Confidence 99998883 334689999999999999999999985 999999999999999999999999999875322211
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .......... .
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-------~~~~i~~~~~----------~ 214 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-------LFQSILEDEV----------R 214 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-------HHHHHHcCCC----------C
Confidence 2233468999999999999999999999999999999999999996433111 1111111110 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSM-----GEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~-----~~v~~~ 776 (839)
.+......+.+++.+||+.+|.+||++ .++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 111223456788899999999999999 777653
No 170
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.7e-34 Score=300.78 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=196.4
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceee-cCCceEEEEeec
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS-EGSNRLLVYEFM 581 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lv~e~~ 581 (839)
..+.+.+.||+|+||.||++.. .+..||+|.++.. ...+.+.+|+.++++++|+|++++++++. +....++++||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 4567788999999999999987 4788999998643 23457899999999999999999999764 556789999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++..++.++.||+.||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 83 AKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 999999998532 234588999999999999999999985 99999999999999999999999999988643322
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
....++..|+|||++.+..++.++||||||+++|||++ |+.||......+ . ......+.
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~------~-~~~~~~~~--------- 216 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------V-VPRVEKGY--------- 216 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH------H-HHHHhcCC---------
Confidence 12234568999999999899999999999999999997 998885322110 0 01111110
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...........+.+++.+|++.+|++||++.++++.|+.
T Consensus 217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 217 KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 011112234567788899999999999999999999875
No 171
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3e-34 Score=308.26 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=199.8
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
++.+.+.||+|+||.||+|.. .+++.||+|.+..........+.+|+.+++.++|+||+++++.+..+...++||||++
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~ 100 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence 456678899999999999975 5689999999976555555678899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 101 ~~~L~~~~~------~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 101 GGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 999999883 23578899999999999999999995 999999999999999999999999999876533221
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
. .....+++.|+|||.+.+..++.++||||||+++|||++|+.||......... ......+. +.+
T Consensus 172 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~------~~~~~~~~------~~~-- 236 (296)
T cd06654 172 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL------YLIATNGT------PEL-- 236 (296)
T ss_pred c-cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH------HHHhcCCC------CCC--
Confidence 1 22345888999999999888999999999999999999999999643321110 00000000 000
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+......+.+++.+|++.+|++||++.++++.
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1112233457788899999999999999999874
No 172
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=297.98 Aligned_cols=260 Identities=22% Similarity=0.269 Sum_probs=197.5
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec-----CCceEEEEe
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-----GSNRLLVYE 579 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~~~lv~e 579 (839)
.+.||+|+||.|..+.. .+|+.||||++.+.. ....++..+|+++++.++|+||+.+.+.+.. -...|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 47899999999999965 578999999997433 3345678899999999999999999998855 457899999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
+| ..+|...|. .++.|+......++.||++||+|+|+. +|+||||||+|+|++.+..+||+|||+|+....
T Consensus 107 lM-etDL~~iik-----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 107 LM-ETDLHQIIK-----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred HH-hhHHHHHHH-----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccc
Confidence 99 568988883 445588888999999999999999996 999999999999999999999999999998754
Q ss_pred CC-ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--------hhhhhcc
Q 038743 660 EH-SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--------AFKEMTN 729 (839)
Q Consensus 660 ~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~~~~~~~ 729 (839)
.. ....+..+.|..|.|||++.. ..|+.+.||||.|||+.||++|+..|-+....+...++.. ....+..
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 31 222466778999999998765 6899999999999999999999999977654332211111 1111111
Q ss_pred Ccccccccccc-cCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 730 GTPLKVADRRL-EGAVE-----EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 730 ~~~~~~~~~~l-~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
......+.... ....+ +..-...++++.++|..||.+|+|++|.++.
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111000000 00000 1223456788888999999999999998764
No 173
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.7e-34 Score=317.85 Aligned_cols=256 Identities=20% Similarity=0.256 Sum_probs=195.2
Q ss_pred HHHHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
+....+.+.+.||+|+||.||++... +++.+|+|++.+.. ......+.+|+.++..++||||+++++.+.++...+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 33456777889999999999999774 68899999985421 222345788999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+++|+|.+++. ...++...+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 120 lv~Ey~~gg~L~~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 120 MVMEYMPGGDLVNLMS------NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEcCCCCCcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999883 23578888889999999999999995 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccCC----CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSNR----PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
..............||+.|+|||++... .++.++|||||||++|||++|+.||....... ....+....
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-------~~~~i~~~~ 263 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------TYSKIMNHK 263 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC
Confidence 7654333233445699999999998754 37899999999999999999999997432211 111111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHh
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFM--RPSMGEVVKML 777 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~--RPt~~~v~~~L 777 (839)
. .+...........+.+++..|++..+.+ ||++.++++..
T Consensus 264 ~------~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 N------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred C------cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0 0000001122344566777788744433 78999988753
No 174
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-34 Score=313.99 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=189.1
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcccc-CCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHH-MNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e 579 (839)
+.+.+.||+|+||.||+|... +++.||||++.... ......+..|++++..++| ++|+++++++.+.+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 456789999999999999764 57899999986532 2334567889999999866 568889999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~g~L~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 82 YVNGGDLMYHIQ-----QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred CCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 999999999884 334678899999999999999999995 999999999999999999999999999875322
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ......... ..
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~------~~ 219 (324)
T cd05587 154 GG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHN------VS 219 (324)
T ss_pred CC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC------CC
Confidence 11 12334569999999999999999999999999999999999999996433211 011111110 01
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
+ +......+.+++.+|++.+|.+||+.
T Consensus 220 ~----~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 Y----PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred C----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 11123456788889999999999976
No 175
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-34 Score=313.54 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=189.6
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e 579 (839)
+.+.+.||+|+||.||+|... +++.||||.+.+.. ......+..|..++..+ +|++|+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 456789999999999999764 57899999986532 12234567788888777 68999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 82 ~~~~g~L~~~~~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 82 YVNGGDLMYQIQ-----QVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred CCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 999999998883 334688999999999999999999995 999999999999999999999999999975432
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+....
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-------~~~~i~~~~-------- 217 (323)
T cd05616 154 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-------LFQSIMEHN-------- 217 (323)
T ss_pred CC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC--------
Confidence 21 12234568999999999999999999999999999999999999997433211 011111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
. ..+......+.+++.+|++.+|.+|++.
T Consensus 218 ~--~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 V--AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred C--CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0 1112233456788899999999999984
No 176
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.9e-34 Score=302.86 Aligned_cols=249 Identities=24% Similarity=0.299 Sum_probs=197.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-----cchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-----HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
+...+.||+|++|.||++.. .+++.||+|.+..... .....+.+|++++.+++||||+++++++.+....++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 55678999999999999976 4689999999854321 12346888999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++++|.+++. ....+++.....++.|++.||.|||+. +|+||||+|+||++++++.++|+|||+++...
T Consensus 84 e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 84 EYMPGGSVKDQLK-----AYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EECCCCcHHHHHH-----HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999884 234678888999999999999999995 99999999999999999999999999998654
Q ss_pred CCCceeE--EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 659 REHSQVV--TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 659 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
....... ....++..|+|||++.+..++.++||||||+++|||++|+.||........ .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~---------~ 220 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------IFKI---------A 220 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------HHHH---------h
Confidence 3222211 234578899999999998899999999999999999999999863321110 0000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
........+......+.+++..||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 221 TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0001111222234456788889999999999999999874
No 177
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-34 Score=313.77 Aligned_cols=266 Identities=24% Similarity=0.350 Sum_probs=205.2
Q ss_pred HHHHHhhccccccccCCCceEEEEEeC--------CCcEEEEEEecccCC-cchHHHHHHHHHhhcc-ccCCccccccee
Q 038743 499 DLQIRTSNFAQLLGTGGFGSVYKGSLG--------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSM-HHMNLVRLCGYC 568 (839)
Q Consensus 499 ~l~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~ 568 (839)
++....+.+.+.||+|+||.||++... .+..||+|.+..... ...+++.+|++++.++ +||||+++++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 444556788899999999999999641 124799998865422 2346789999999999 899999999999
Q ss_pred ecCCceEEEEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCc
Q 038743 569 SEGSNRLLVYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPEN 637 (839)
Q Consensus 569 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~N 637 (839)
.+....++++||+++|+|.++|..... .....+++.+++.++.||+.||+|||+ ++|+||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~N 164 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARN 164 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccce
Confidence 999999999999999999999854211 123468899999999999999999998 499999999999
Q ss_pred EEECCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCC
Q 038743 638 ILLDENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAE 715 (839)
Q Consensus 638 ill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~ 715 (839)
||+++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999998654322111 122334568999999999999999999999999999998 888875332111
Q ss_pred CccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCC
Q 038743 716 DFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADI 783 (839)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~ 783 (839)
....+..+.. ...+......+.+++.+|++.+|.+||+|.++++.|+.....
T Consensus 245 -------~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 245 -------LFKLLKEGHR---------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred -------HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 1111111110 011112234677889999999999999999999999877643
No 178
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.7e-34 Score=300.96 Aligned_cols=248 Identities=25% Similarity=0.356 Sum_probs=196.8
Q ss_pred cccccCCCceEEEEEeCC--C--cEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLGD--G--TLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|++|.||+|...+ + ..||||.+..... ...+.+..|+.++.+++||||+++++.+.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997643 3 3699999976654 456689999999999999999999999988 889999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++.... ...+++...+.++.|++.||+|||+ ++++|+||||+||+++.++.+||+|||+++.+......
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDA---LGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhcc---cccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999985431 1568999999999999999999998 49999999999999999999999999999876442221
Q ss_pred e--EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 664 V--VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 664 ~--~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...... .. ..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-------~~~~~~-~~-----~~- 219 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-------LKKIDK-EG-----ER- 219 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-------HHHHHh-cC-----Cc-
Confidence 1 123457789999999999999999999999999999998 9999863321110 000000 00 00
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
...+......+.+++.+|++.+|++||++.+|++.|.
T Consensus 220 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 -LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0011123456778899999999999999999999885
No 179
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.9e-34 Score=312.51 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=188.4
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
++||+|+||.||+|... +++.||+|.++... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999774 68899999996532 22344567788877754 899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~i~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 151 (316)
T cd05620 81 GDLMFHIQ-----DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DN 151 (316)
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CC
Confidence 99998883 234688899999999999999999995 9999999999999999999999999998743211 12
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ..+..... .+.+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-------~~~~~~~~------~~~~~~- 217 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-------LFESIRVD------TPHYPR- 217 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhC------CCCCCC-
Confidence 2344568999999999999999999999999999999999999996432211 11111111 011111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMG-EVV 774 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~-~v~ 774 (839)
.....+.+++.+|++.+|.+||++. +++
T Consensus 218 ---~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 ---WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ---CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1223466788889999999999984 554
No 180
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.2e-34 Score=305.13 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=199.8
Q ss_pred HHhhccccccccCCCceEEEEEeCC----CcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
...+.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4456678899999999999997643 2479999886554 2344578999999999999999999998875 55789
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
||||+++|+|.+++.. ....+++..++.++.+++.||+|||+. +++|+||||+|||++.++.+||+|||+++.
T Consensus 84 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 84 VMELAPLGELRSYLQV----NKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEcCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 9999999999999943 234589999999999999999999984 999999999999999999999999999987
Q ss_pred cCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.............++..|+|||.+....++.++||||||++++|+++ |+.||......+. ...+..+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~~~-- 227 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-------IGRIENGERL-- 227 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHHcCCcC--
Confidence 64432222223334568999999988889999999999999999996 9999864432110 0111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+......+.+++.+|+..+|++||++.++++.|++.
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 228 -------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01112234677888999999999999999999999864
No 181
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.1e-34 Score=320.92 Aligned_cols=199 Identities=24% Similarity=0.319 Sum_probs=168.5
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.++||+|+||+||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++.+.+....++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 45678999999999999976 568899999986432 12235688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. +...+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~-----~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 83 IPGGDMMSLLI-----RMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 99999999884 234678888889999999999999995 9999999999999999999999999997533110
Q ss_pred Cc----------------------------------------------eeEEeeccccceeCcccccCCCCCCcccEEeh
Q 038743 661 HS----------------------------------------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSY 694 (839)
Q Consensus 661 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~ 694 (839)
.. .......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 00112468999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCC
Q 038743 695 GMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 695 Gvvl~elltG~~p~~~~ 711 (839)
||++|||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (382)
T cd05625 235 GVILYEMLVGQPPFLAQ 251 (382)
T ss_pred hHHHHHHHhCCCCCCCC
Confidence 99999999999999643
No 182
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-34 Score=321.98 Aligned_cols=200 Identities=24% Similarity=0.319 Sum_probs=169.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
|.+.+.||+|+||.||+++. .+++.||||++.+.. ......+.+|++++.+++||||+++++.+.+++..++||||
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~ 82 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence 56678999999999999976 468999999986432 22345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....++......++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~~g~L~~~i~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 83 IPGGDMMSLLI-----RLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 99999999984 334678888889999999999999995 9999999999999999999999999998533110
Q ss_pred Cc------------------------------------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHH
Q 038743 661 HS------------------------------------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLL 698 (839)
Q Consensus 661 ~~------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl 698 (839)
.. .......||+.|||||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00 001124699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCC
Q 038743 699 LEIVGGRRNLDMSG 712 (839)
Q Consensus 699 ~elltG~~p~~~~~ 712 (839)
|||++|+.||....
T Consensus 235 yell~G~~Pf~~~~ 248 (376)
T cd05598 235 YEMLVGQPPFLADT 248 (376)
T ss_pred eehhhCCCCCCCCC
Confidence 99999999997543
No 183
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.1e-34 Score=303.23 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=194.9
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.++||+|+||.||+|.. .+++.||+|.+.... .....++.+|++++.+++||||+++++++......++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 45667899999999999965 578899999986432 3334578899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|..+. .+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.+||+|||++.......
T Consensus 83 ~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 83 GGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred CCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 99996543 457788889999999999999995 99999999999999999999999999998654321
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||...........+.-......... .+.+.
T Consensus 150 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 221 (279)
T cd06619 150 --AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLP- 221 (279)
T ss_pred --ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCC-
Confidence 2234688999999999999999999999999999999999999965332221111100001100000 01110
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.......+.+++.+|++.+|++||+++++++.-
T Consensus 222 --~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 222 --VGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred --CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 111234577888999999999999999998753
No 184
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-36 Score=284.39 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=198.6
Q ss_pred HhhccccccccCCCceEEEEE-eCCCcEEEEEEec--ccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 503 RTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
..+.+.++||+|.|+.||+.. .++|+.+|+|++. +....+.+++.+|+++.+.|+||||++|...+.+....+||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 446677899999999999984 4679999999874 3334466789999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC---CCCceeecccCccee
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKL 656 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~---~~~~~kl~DfGla~~ 656 (839)
+|.|++|..-|. .+...++...-..+.||+++|.|+|. ++|||||+||+|+||. ...-+||+|||+|..
T Consensus 91 ~m~G~dl~~eIV-----~R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 91 LVTGGELFEDIV-----AREFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred cccchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999987663 23567777888899999999999999 5999999999999994 344689999999998
Q ss_pred cCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
++ .........|||+|||||++...+|+..+|||+.|||||-|+.|..||.+...... .+.+..+.. -+
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rl-------ye~I~~g~y--d~ 231 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-------YEQIKAGAY--DY 231 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHH-------HHHHhcccc--CC
Confidence 76 33344456799999999999999999999999999999999999999975432211 111111111 01
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+++.-. ...+....++.+|+..||.+|-|+.|.++.
T Consensus 232 ~~~~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 232 PSPEWD----TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCcccC----cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 111111 223345677788999999999999988653
No 185
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.7e-34 Score=307.44 Aligned_cols=258 Identities=25% Similarity=0.409 Sum_probs=200.2
Q ss_pred HhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
..+.+.+.||+|+||.||++... ++..||+|++..... ....++.+|+.++.+++||||+++++++.++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 34566789999999999999763 467899999865432 33467899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCC-----------------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcE
Q 038743 576 LVYEFMKNGSLDKWIFPSYH-----------------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENI 638 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Ni 638 (839)
+||||+++|+|.+++..... .....+++..++.++.||+.||+|||+. +++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhhe
Confidence 99999999999999853211 1123578889999999999999999984 999999999999
Q ss_pred EECCCCceeecccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCC
Q 038743 639 LLDENFCPKVSDFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAED 716 (839)
Q Consensus 639 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~ 716 (839)
|+++++.+||+|||++......... .......+..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~- 240 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE- 240 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999865332211 1122234667999999998999999999999999999997 888875322111
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.......+... ..+......+.+++.+|++.+|++||++.|+++.|+.
T Consensus 241 ------~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 ------VIYYVRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------HHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111111110 0111234568889999999999999999999999863
No 186
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-34 Score=314.80 Aligned_cols=242 Identities=26% Similarity=0.323 Sum_probs=188.0
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHH-HhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVN-TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++.. .+|+.||+|++.... .....++..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999975 568999999986432 222345556655 46778999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~ 151 (325)
T cd05604 81 GELFFHLQ-----RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-D 151 (325)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-C
Confidence 99998883 345688999999999999999999984 99999999999999999999999999987532211 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .......... .+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-------~~~~~~~~~~------~~~~- 217 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-------MYDNILHKPL------VLRP- 217 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-------HHHHHHcCCc------cCCC-
Confidence 2234568999999999999999999999999999999999999996432111 1111111110 0111
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.....+.+++.+|++.+|.+||++.+.++.
T Consensus 218 ---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 218 ---GASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred ---CCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 123456678888999999999988644433
No 187
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.4e-34 Score=319.87 Aligned_cols=199 Identities=24% Similarity=0.315 Sum_probs=169.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
|.+.+.||+|+||.||++.. .+++.||||++.+.. ......+.+|++++.+++||||+++++++.+....++||||
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~ 82 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEF 82 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeC
Confidence 45678999999999999965 578999999985431 22345688899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 83 ~~gg~L~~~l~-----~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 83 LPGGDLMTMLI-----KYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred CCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999999984 335678888899999999999999995 9999999999999999999999999999643211
Q ss_pred Cce----------------------------------------------eEEeeccccceeCcccccCCCCCCcccEEeh
Q 038743 661 HSQ----------------------------------------------VVTMVRGTRGYLAPEWVSNRPITVKADVYSY 694 (839)
Q Consensus 661 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~ 694 (839)
... ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0012359999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCC
Q 038743 695 GMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 695 Gvvl~elltG~~p~~~~ 711 (839)
||++|||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (377)
T cd05629 235 GAIMFECLIGWPPFCSE 251 (377)
T ss_pred chhhhhhhcCCCCCCCC
Confidence 99999999999999643
No 188
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.6e-34 Score=305.80 Aligned_cols=259 Identities=24% Similarity=0.296 Sum_probs=202.5
Q ss_pred HHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
|....+.+.+.||+|+||+||++.. .+++.||+|++.... ....+.+.+|++++..++||||+++++++......++|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 3445667788999999999999976 468899999885432 33356789999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+++++|.+++. ....+++.....++.+++.||.|||+. .+++||||||+||++++++.++|+|||++...
T Consensus 82 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 82 MEFMDCGSLDRIYK-----KGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred EecCCCCCHHHHHH-----hccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 99999999998883 234688999999999999999999973 37999999999999999999999999998754
Q ss_pred CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-----cchhhhhhhhccCcc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-----FYPGWAFKEMTNGTP 732 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~ 732 (839)
.... .....|+..|+|||++.+..++.++|||||||++|||++|+.||......+.. ....+...
T Consensus 155 ~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------- 224 (284)
T cd06620 155 INSI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ------- 224 (284)
T ss_pred hhhc---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH-------
Confidence 2221 12346899999999998889999999999999999999999999754432110 00011000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
+................+.+++.+|++.+|++||++.||+++.
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 225 --IVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --HhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0000000000112345677888899999999999999999874
No 189
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.9e-34 Score=307.24 Aligned_cols=261 Identities=24% Similarity=0.382 Sum_probs=200.0
Q ss_pred HHhhccccccccCCCceEEEEEeC------CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
...+.+.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++++++||||+++++++.+....
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 456777889999999999999653 245899998864422 2234678899999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCC-----CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeec
Q 038743 575 LLVYEFMKNGSLDKWIFPSYH-----HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVS 649 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~ 649 (839)
++||||+++|+|.+++..... .....+.+..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999953211 0123456778889999999999999984 99999999999999999999999
Q ss_pred ccCcceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhh
Q 038743 650 DFGLAKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEM 727 (839)
Q Consensus 650 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 727 (839)
|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||......+ .....
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~ 234 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-------VLKFV 234 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHH
Confidence 99999865332211 1122335678999999999999999999999999999998 788875422111 00111
Q ss_pred ccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 728 TNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 728 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
..+... ..+......+.+++.+|++.+|++||+|.++++.|++..
T Consensus 235 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 MDGGYL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111000 011122356888999999999999999999999998754
No 190
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.8e-34 Score=309.46 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=200.5
Q ss_pred HHhhccccccccCCCceEEEEEeC--------CCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecC
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG--------DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG 571 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 571 (839)
...+.+.+.||+|+||.||++... ....+|+|++.... .....++..|++++.++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 345667899999999999999642 24579999987542 23345688999999999 699999999999999
Q ss_pred CceEEEEeeccCCChhhhcccCCC-----------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYH-----------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
...+++|||+++|+|.+++..... .....+++.++..++.||+.||.|||+. +++||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 999999999999999999854211 1234688999999999999999999984 99999999999999
Q ss_pred CCCCceeecccCcceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCcc
Q 038743 641 DENFCPKVSDFGLAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFF 718 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 718 (839)
++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--- 244 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE--- 244 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 999999999999998664322211 122234567999999999999999999999999999999 888885332111
Q ss_pred chhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 719 YPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.......+.. ...+......+.+++.+|++.+|++||++.++++.|+..
T Consensus 245 ----~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 245 ----LFKLLREGHR---------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred ----HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1111111111 011122234577889999999999999999999999754
No 191
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.3e-34 Score=311.88 Aligned_cols=200 Identities=22% Similarity=0.276 Sum_probs=170.9
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||+++.. +++.||+|.+.+.. ......+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey 82 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY 82 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 567789999999999999764 67899999986421 22234578899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~~----~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 83 YVGGDLLTLLSK----FEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred CCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999942 234678888999999999999999985 9999999999999999999999999999876544
Q ss_pred CceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
.........|++.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 3333344569999999999875 56789999999999999999999999643
No 192
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=307.42 Aligned_cols=251 Identities=24% Similarity=0.331 Sum_probs=208.1
Q ss_pred HHhhccccccccCCCceEEEEEeCC-CcEEEEEEecccCCcc---hHHHHHHHHHhhccc-cCCcccccceeecCCceEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHG---EKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l 576 (839)
...|.+.+.||+|.||.||+++.+. |+.+|+|.+.+..... .....+|+.+|+++. |||||.+.+.+......++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3457778999999999999997754 9999999997654432 357899999999998 9999999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC----CCceeecccC
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE----NFCPKVSDFG 652 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~----~~~~kl~DfG 652 (839)
|||++.+|.|.+.|... .+++.....++.||+.+++|||+. +|+||||||+|+|+.. ++.+|++|||
T Consensus 114 vmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999998532 388999999999999999999995 9999999999999953 3579999999
Q ss_pred cceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 653 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
++..... ........||+.|+|||++....|+..+||||+||++|.|++|..||......+... .+..+..
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~ 255 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF 255 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC
Confidence 9998766 445677889999999999999999999999999999999999999998665433211 1111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
......-+.....+.+++..++..+|.+|+|+.++++.
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11122223345566778888999999999999999985
No 193
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-35 Score=313.43 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=202.0
Q ss_pred hccccccccCCCceEEEEEeC--CCc--EEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG--DGT--LVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
..+.++||+|.||.|++|.+. .|+ .||||.+...... ...+|++|+.+|.+|+|+|+++|+|+..+ ...+||+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 345679999999999999773 344 6999999755433 56789999999999999999999999988 78899999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
.++.|+|.+.|++. ....|-.....+++.|||.||.||... ++|||||.++|+||-..-.+||+||||.+-++.
T Consensus 191 LaplGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hcccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999652 445677888899999999999999995 999999999999999999999999999997754
Q ss_pred CCce-eEE-eeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 660 EHSQ-VVT-MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 660 ~~~~-~~~-~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
.... .+. ...-...|.|||.+..+.++.++|||+|||.||||++ |..||-+.... .+.+.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qIL~~i 328 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QILKNI 328 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HHHHhc
Confidence 3332 222 2335677999999999999999999999999999996 66676543221 112233
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
|..-+-..+..+.+++.+++..||.++|++|||+..+.+.
T Consensus 329 D~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 329 DAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3322333455677889999999999999999999999743
No 194
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.4e-34 Score=298.67 Aligned_cols=251 Identities=31% Similarity=0.459 Sum_probs=201.1
Q ss_pred cccccCCCceEEEEEeCC----CcEEEEEEecccCCcc-hHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++.... +..||+|.+....... .+.+.+|++.+..++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999997754 7899999997654333 56789999999999999999999999999999999999999
Q ss_pred CChhhhcccCCC----CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 584 GSLDKWIFPSYH----HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 584 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
++|.+++..... .....+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999853210 0136789999999999999999999994 999999999999999999999999999987654
Q ss_pred CCc-eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 660 EHS-QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 660 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
... .......++..|+|||.+....++.++||||||++++||++ |+.||......+ ..+....+.
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~------ 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-------VLEYLRKGY------ 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCC------
Confidence 321 11233457889999999988899999999999999999999 699986542111 111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
....+......+.+++.+|++.+|.+||++.++++.|+
T Consensus 225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01111222456788999999999999999999999874
No 195
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.8e-34 Score=300.98 Aligned_cols=246 Identities=22% Similarity=0.328 Sum_probs=192.4
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
...||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++|+||+++++++..++..++|+||+++++|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 92 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL 92 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence 35899999999999975 46788999998765555566899999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccC--ChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecCCCCce
Q 038743 587 DKWIFPSYHHRDRVL--DWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~ 663 (839)
.+++... ...+ ++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 93 ~~~l~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~- 164 (268)
T cd06624 93 SALLRSK----WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP- 164 (268)
T ss_pred HHHHHHh----cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-
Confidence 9998532 1234 7788889999999999999984 9999999999999976 67999999999976543221
Q ss_pred eEEeeccccceeCcccccCC--CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSNR--PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~--~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
......|+..|+|||++... .++.++||||||+++|||++|+.||......... .+.... ....
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~-----------~~~~ 230 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGM-----------FKIH 230 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---Hhhhhh-----------hccC
Confidence 12233578999999998664 3789999999999999999999998643221100 000000 0001
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+......+.+++.+||+.+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 1122233455778889999999999999999976
No 196
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-33 Score=305.59 Aligned_cols=263 Identities=22% Similarity=0.280 Sum_probs=197.1
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||+|+||.||++.. .++..+|+|.+..... ....++.+|++++.+++||||+++++++.++...++||||++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~ 82 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD 82 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence 45678999999999999976 4678899998864422 223568899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++. ....+++..+..++.||++||.|||+. .+++|+||||+|||++.++.+||+|||++.......
T Consensus 83 ~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 83 GGSLDQVLK-----KAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred CCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 999999984 235688899999999999999999973 379999999999999999999999999987543221
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC------------
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG------------ 730 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~------------ 730 (839)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||......................
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCC
Confidence 123458899999999988889999999999999999999999985432111000000000000000
Q ss_pred -----cccccccccc---cCCCC-HHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 731 -----TPLKVADRRL---EGAVE-EEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 731 -----~~~~~~~~~l---~~~~~-~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
...++.+... ....+ ......+.+++.+|++.+|++||++.+|++.-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred ccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 00000 01234578999999999999999999998763
No 197
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3e-34 Score=312.47 Aligned_cols=244 Identities=25% Similarity=0.324 Sum_probs=187.7
Q ss_pred cccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHH-HhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVN-TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||++... +++.||+|++.... .....++..|.. ++..++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999764 57889999986432 122234455544 46778999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++. ....+.......++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~ 151 (325)
T cd05602 81 GELFYHLQ-----RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-G 151 (325)
T ss_pred CcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-C
Confidence 99999884 334577788888999999999999995 99999999999999999999999999997543221 1
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .......... .+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~~~------~~~-- 216 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-------MYDNILNKPL------QLK-- 216 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-------HHHHHHhCCc------CCC--
Confidence 2334569999999999999999999999999999999999999996432211 0111111100 011
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
......+.+++.+|++.+|.+||++.+.+..+.
T Consensus 217 --~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05602 217 --PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 249 (325)
T ss_pred --CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHh
Confidence 122345677888899999999999875544443
No 198
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.7e-34 Score=302.12 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=197.5
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 344557899999999999976 457899999986443 233456889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ...+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++..+....
T Consensus 85 ~~~~L~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 85 GGGSALDLLK------PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999883 34688999999999999999999984 99999999999999999999999999998654322
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.|+......... ...... ..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~---------~~ 218 (277)
T cd06642 156 I-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL-------FLIPKN---------SP 218 (277)
T ss_pred h-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-------hhhhcC---------CC
Confidence 1 122345788999999999989999999999999999999999998633221100 000000 01
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..........+.+++.+|++.+|++||+|.+|++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 219 PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11122234567788899999999999999999984
No 199
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.9e-34 Score=301.56 Aligned_cols=249 Identities=26% Similarity=0.393 Sum_probs=192.9
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecC------CceE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG------SNRL 575 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~------~~~~ 575 (839)
.+.+.+.||+|+||.||+|.. .+++.||+|++... .....++..|+.++.++ +|+||+++++++... ...+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 345567899999999999976 45889999998654 34456788999999998 799999999998653 4578
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
++|||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++.
T Consensus 86 iv~e~~~~~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEcCCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 999999999999998532 335688999999999999999999995 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
....... ......|+..|+|||++. ...++.++|||||||++|||++|+.||......... ......
T Consensus 160 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-------~~~~~~ 231 (272)
T cd06637 160 QLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-------FLIPRN 231 (272)
T ss_pred ecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-------HHHhcC
Confidence 6543221 223355889999999986 346788999999999999999999999633211100 000000
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
. ...+. .......+.+++.+||+.+|.+||++.++++
T Consensus 232 ~-----~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 232 P-----APRLK---SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred C-----CCCCC---CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 00000 1112245778889999999999999999975
No 200
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9.7e-34 Score=298.04 Aligned_cols=238 Identities=24% Similarity=0.397 Sum_probs=187.2
Q ss_pred cccccCCCceEEEEEeCCCc-----------EEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 509 QLLGTGGFGSVYKGSLGDGT-----------LVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
+.||+|+||.||+|...+.. .|++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999875432 5888877544322 6788999999999999999999999988 788999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-------ceeecc
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-------CPKVSD 650 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-------~~kl~D 650 (839)
|||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 79 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHRE----KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999998432 22688999999999999999999985 999999999999999888 799999
Q ss_pred cCcceecCCCCceeEEeeccccceeCcccccCC--CCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhh
Q 038743 651 FGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR--PITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEM 727 (839)
Q Consensus 651 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 727 (839)
||++..... .....++..|+|||++... .++.++||||||+++|||++ |..|+......+.. ...
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-------~~~ 219 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-------RFY 219 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-------HHH
Confidence 999986543 1223466789999999876 78999999999999999999 46666533211100 000
Q ss_pred ccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 728 TNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 728 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.... .. +......+.+++.+||+.+|.+||++.+|++.|+
T Consensus 220 ~~~~-------~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQH-------RL----PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcCC-------CC----CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 00 0011156788999999999999999999999874
No 201
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-33 Score=298.96 Aligned_cols=254 Identities=23% Similarity=0.341 Sum_probs=187.1
Q ss_pred cccccCCCceEEEEEeCCC---cEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSLGDG---TLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.++..++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999975443 356677765432 234567999999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC-ce
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH-SQ 663 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~-~~ 663 (839)
+|.+++..... ....+.+..+..++.||++||+|||+. +++||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 81 DLKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred cHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 99999954311 123456677889999999999999985 89999999999999999999999999986432111 11
Q ss_pred eEEeeccccceeCcccccC-------CCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSN-------RPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~-------~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
......++..|+|||++.. ..++.++||||||+++|||++ |..||......+ .......+....+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~~~~~~~~~ 229 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-------VLNHVIKDQQVKL 229 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHhhccccc
Confidence 1223457889999998753 245789999999999999997 466775322211 1111111222233
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.++.+....+ ..+.+++..|| .+|++||+|++|++.|.
T Consensus 230 ~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3443333322 34556777799 57999999999999884
No 202
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-33 Score=317.61 Aligned_cols=191 Identities=26% Similarity=0.265 Sum_probs=164.0
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.+.||+|+||.||++... .++.||||... ...+.+|++++++++|+|||++++++..+...++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 4566789999999999999775 47899999642 2346789999999999999999999999999999999995
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
++|.+++.. ....+++.+++.|+.||+.||.|||+. +|+||||||+||||+.++.+||+|||+++.......
T Consensus 244 -~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 244 -SDLYTYLGA----RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred -CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 688888742 234689999999999999999999985 999999999999999999999999999987643322
Q ss_pred e-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCC
Q 038743 663 Q-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNL 708 (839)
Q Consensus 663 ~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~ 708 (839)
. ......||+.|+|||++.+..++.++|||||||+||||++|..++
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 2 123456999999999999999999999999999999999988765
No 203
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.1e-34 Score=300.24 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=188.8
Q ss_pred cccccCCCceEEEEEeC----CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceee-cCCceEEEEeecc
Q 038743 509 QLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCS-EGSNRLLVYEFMK 582 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lv~e~~~ 582 (839)
+.||+|+||.||+|... +...||+|++.... ....+.+..|+.+++.++||||+++++++. .+...++++||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 24579999985432 233457889999999999999999999775 4556889999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++.. ....+.+..++.++.||+.||.|||+. +++||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRS----ETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 9999999842 223467788899999999999999984 999999999999999999999999999986533221
Q ss_pred ee---EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCC-CCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 663 QV---VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGR-RNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 663 ~~---~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
.. .....++..|+|||.+.+..++.++||||||+++|||++|. .|+......+ .. .....+.. .
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~----~~~~~~~~-----~ 221 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---IT----VYLLQGRR-----L 221 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHhcCCC-----C
Confidence 11 12234577899999998889999999999999999999964 4554221100 00 01111100 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+......+.+++..||+.+|++||++.+|++.|+..
T Consensus 222 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 222 ----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00111234577899999999999999999999999764
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4e-34 Score=310.98 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=189.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e 579 (839)
+++.+.||+|+||.||++.. .+++.||+|++.+.. ....+.+..|..++..+. |++|+++.+++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 46778999999999999976 468999999986432 223356778888888875 6778889999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 82 y~~~g~L~~~i~-----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 82 YVNGGDLMYHIQ-----QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred CCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 999999999883 334689999999999999999999985 999999999999999999999999999875432
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.+.....
T Consensus 154 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-------~~~~i~~~~~------- 218 (323)
T cd05615 154 DGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-------LFQSIMEHNV------- 218 (323)
T ss_pred CCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC-------
Confidence 211 1233458999999999999999999999999999999999999996432211 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSM 770 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~ 770 (839)
..+......+.+++.+|++.+|.+|++.
T Consensus 219 ---~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ---SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1111223456788889999999999974
No 205
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.7e-34 Score=309.85 Aligned_cols=200 Identities=22% Similarity=0.280 Sum_probs=170.4
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.|.+.+.||+|+||.||+++.. +++.||+|++.+.. ....+.+.+|+.++..++|+||+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 3567789999999999999764 58999999986421 2234558889999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~g~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 82 YYVGGDLLTLLSK----FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred cCCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 9999999999842 234688889999999999999999995 999999999999999999999999999986644
Q ss_pred CCceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 33333334569999999999863 4578899999999999999999999964
No 206
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-33 Score=303.54 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=200.2
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
..+.+.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 4566778999999999999975 579999999997654455567889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ...+++.++..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~------~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 99 AGGSLTDVVT------ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred CCCCHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999883 24578889999999999999999985 99999999999999999999999999998654332
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.. .....+++.|+|||.+.+..++.++||||||+++||+++|+.||.......... .....+. +.
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~~------~~-- 234 (297)
T cd06656 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT------PE-- 234 (297)
T ss_pred cC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCCC------CC--
Confidence 21 223457889999999999889999999999999999999999996543221100 0000000 00
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+......+.+++.+||+.+|++||++.+|++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011222344677889999999999999999988
No 207
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.7e-34 Score=301.78 Aligned_cols=257 Identities=26% Similarity=0.351 Sum_probs=199.0
Q ss_pred hhccccccccCCCceEEEEEeC------CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG------DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 576 (839)
.+...+.||+|+||.||+|+.. +.+.|++|.+...... ...++.+|++++++++|+||+++++++.+....++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 3445678999999999999763 3467999988654332 34679999999999999999999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCC----cccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 577 VYEFMKNGSLDKWIFPSYHHR----DRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
||||+++|+|.+++....... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccc
Confidence 999999999999985332111 12689999999999999999999985 89999999999999999999999999
Q ss_pred cceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 653 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
+++..............++..|+|||.+.+...+.++||||||++++||++ |..||....+.. .......+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-------~~~~~~~~~ 235 (275)
T cd05046 163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-------VLNRLQAGK 235 (275)
T ss_pred cccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-------HHHHHHcCC
Confidence 987543322222223346778999999988889999999999999999998 778885332211 011111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.. ..........+.+++.+|++.+|++||++.+++++|.
T Consensus 236 ~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 236 LE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 10 0111123346788999999999999999999999886
No 208
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.6e-34 Score=300.35 Aligned_cols=255 Identities=25% Similarity=0.381 Sum_probs=198.1
Q ss_pred hccccccccCCCceEEEEEeCC--CcEEEEEEecccC----------CcchHHHHHHHHHhhc-cccCCcccccceeecC
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVL----------PHGEKEFVTEVNTIGS-MHHMNLVRLCGYCSEG 571 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~ 571 (839)
+.+.+.||+|+||.||+|.... ++.+|+|.+.... .....++..|+.++.+ ++||||+++++++.+.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4556789999999999998754 6889999875321 1223457778888765 7999999999999999
Q ss_pred CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
...+++|||+++++|.+++... ......+++..++.++.|++.||.|||+. .+++|+||+|+|||++.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSL-KEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHH-HhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999887432 12345688899999999999999999963 47999999999999999999999999
Q ss_pred CcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 652 GLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 652 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
|++....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ......++.
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-------~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-------LATKIVEAV 229 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-------HHHHHhhcc
Confidence 9998765433 2334568899999999999889999999999999999999999986332110 001111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
. .+ .........+.+++.+|++.+|++||++.||..++++
T Consensus 230 ~----~~----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 230 Y----EP----LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred C----Cc----CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0 00 0011123457788889999999999999999999863
No 209
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.1e-34 Score=301.49 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=195.6
Q ss_pred cccccCCCceEEEEEeCC-------CcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGD-------GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.||+|+||.||+|+..+ ++.+|+|.+.... .....++.+|+.+++.++||||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999997642 3579999886542 23456789999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCC--CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-----ceeecccCc
Q 038743 581 MKNGSLDKWIFPSYHH--RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-----CPKVSDFGL 653 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-----~~kl~DfGl 653 (839)
+++++|.+++...... ....+++.+++.++.|++.||+|||+. +++|+||||+||+++.+. .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999543111 234578999999999999999999984 899999999999999877 899999999
Q ss_pred ceecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 654 AKLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 654 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+ .......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-------VLQHVTAGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-------HHHHHhcCC
Confidence 9765332211 1122345678999999999999999999999999999998 999985332111 001111100
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...........+.+++.+||+.+|.+||++.+|++.|++
T Consensus 231 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 ---------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 001112234567889999999999999999999999863
No 210
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.6e-34 Score=308.88 Aligned_cols=263 Identities=20% Similarity=0.286 Sum_probs=193.8
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+|.+.+.||+|+||.||+|... +++.||+|.++.... .....+.+|+.++++++||||+++++++..+...++||||+
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 86 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYL 86 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCC
Confidence 4666789999999999999764 678999999864432 23346788999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++ +|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 87 DK-DLKQYMDD----CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CC-CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 75 78877732 234578889999999999999999995 99999999999999999999999999997653322
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--------hhhhhccCcc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--------AFKEMTNGTP 732 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~ 732 (839)
. ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+....... .+..+.....
T Consensus 159 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 159 K-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred c-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 1 1223457889999998865 5689999999999999999999999965432211100000 0000000000
Q ss_pred -cccccccccC----CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 -LKVADRRLEG----AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 -~~~~~~~l~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...-.+.... .........+.+++.+|++.+|.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000 000112334678889999999999999999987
No 211
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.3e-34 Score=301.56 Aligned_cols=240 Identities=23% Similarity=0.392 Sum_probs=187.1
Q ss_pred cccccCCCceEEEEEeCC--------CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGD--------GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.||+|+||.||+|.... ...||+|.+........+++.+|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999996532 235888888655444456788999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCc--------eeecccC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC--------PKVSDFG 652 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~--------~kl~DfG 652 (839)
+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. ++++|||
T Consensus 81 ~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKK----NKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999843 234688999999999999999999984 9999999999999987765 5999999
Q ss_pred cceecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCC-CCCCCCCCCCCccchhhhhhhhccC
Q 038743 653 LAKLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGR-RNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 653 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
++...... ....++..|+|||++.+ ..++.++||||||+++|||++|. .|+....... .....
T Consensus 154 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--------~~~~~-- 218 (258)
T cd05078 154 ISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--------KLQFY-- 218 (258)
T ss_pred cccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--------HHHHH--
Confidence 88754321 22457888999999986 45799999999999999999995 4443221110 00000
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
... ...+......+.+++..||+.+|++||+++++++.|+
T Consensus 219 ------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 219 ------EDR--HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------Hcc--ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 0111122345788899999999999999999999874
No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7e-34 Score=303.60 Aligned_cols=250 Identities=25% Similarity=0.336 Sum_probs=194.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+...++||+|+||.||++.. .+++.||||.+...... ....+..|+.++.+++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 44567899999999999966 46889999998653222 234577899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 82 MNGGDLKFHIYHM---GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred cCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 9999999988432 234588999999999999999999984 9999999999999999999999999999765322
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... ....... . .....
T Consensus 156 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~----~~~~~~~----~-~~~~~ 224 (285)
T cd05630 156 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE----EVERLVK----E-VQEEY 224 (285)
T ss_pred cc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH----HHHhhhh----h-hhhhc
Confidence 21 123468999999999999999999999999999999999999997533211000 0000000 0 00011
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPS-----MGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~ 775 (839)
.......+.+++..||+.+|.+||+ +.|+++
T Consensus 225 ----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 225 ----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1112334678888899999999999 777765
No 213
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.1e-34 Score=332.05 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=199.1
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.++||+|+||.||+|... +++.||||++...... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence 3567789999999999999764 5899999999654322 23568999999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCC------CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 580 FMKNGSLDKWIFPSYH------HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
|+++|+|.+++..... .....+++..++.++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCc
Confidence 9999999998853211 1123456778899999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCc-----------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCC
Q 038743 654 AKLMGREHS-----------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED 716 (839)
Q Consensus 654 a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~ 716 (839)
++....... .......||+.|||||.+.+..++.++|||||||++|||++|+.||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 987621110 001124699999999999999999999999999999999999999964322110
Q ss_pred ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHhcCC
Q 038743 717 FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRP-SMGEVVKMLEGS 780 (839)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-t~~~v~~~L~~~ 780 (839)
. ... . +.++... ....+....+.+++.+|++.+|++|| +++++++.|+..
T Consensus 240 ~------~~~----~---i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 240 S------YRD----V---ILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h------hhh----h---ccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 000 0 0000000 00012234567888999999999996 677777777654
No 214
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-33 Score=297.01 Aligned_cols=247 Identities=27% Similarity=0.428 Sum_probs=195.9
Q ss_pred HhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
..+.+.+.||+|+||.||++.. +++.||+|.++.. .....+.+|+.++.+++|||++++++++... ..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4567789999999999999976 6788999998643 2345789999999999999999999998654 5799999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 82 KGNLVNFLRTR---GRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 99999998532 23467899999999999999999998 499999999999999999999999999997643221
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.....+..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . ......+ ..
T Consensus 155 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~-~~~~~~~---------~~ 215 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE------V-KECVEKG---------YR 215 (254)
T ss_pred ---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH------H-HHHHhCC---------CC
Confidence 11234567999999998899999999999999999997 999886332111 0 0111111 00
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
..........+.+++.+|++.+|++||++.+|++.|++
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11112234567789999999999999999999999875
No 215
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.4e-33 Score=296.18 Aligned_cols=248 Identities=24% Similarity=0.326 Sum_probs=199.8
Q ss_pred hhccccccccCCCceEEEEEeCC-CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.+.||+|+||.||+|...+ ++.+++|.+..... ..++.+|++++++++||||+++++++.+....++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 45667889999999999998754 78999999865422 6789999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~----~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 82 AGSVSDIMKI----TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 9999999842 345789999999999999999999985 999999999999999999999999999987644321
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ....... .+. .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~-----~~~--~ 219 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-------FMIPNKP-----PPT--L 219 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-------hhhccCC-----CCC--C
Confidence 223345788999999999999999999999999999999999998643321110 0000000 000 0
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..+......+.+++.+|++.+|++||++.+|++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 111223346788889999999999999999976
No 216
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.9e-33 Score=305.27 Aligned_cols=199 Identities=23% Similarity=0.321 Sum_probs=160.8
Q ss_pred ccccccCCCceEEEEEeC---CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeec--CCceEEEEeecc
Q 038743 508 AQLLGTGGFGSVYKGSLG---DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE--GSNRLLVYEFMK 582 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~ 582 (839)
.++||+|+||+||+|... +++.||+|.+... .....+.+|++++.+++||||+++++++.. ....+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999764 4678999998643 223467899999999999999999998854 456789999986
Q ss_pred CCChhhhcccCC----CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE----CCCCceeecccCcc
Q 038743 583 NGSLDKWIFPSY----HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL----DENFCPKVSDFGLA 654 (839)
Q Consensus 583 ~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill----~~~~~~kl~DfGla 654 (839)
+ +|.+++.... ......+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 7777763211 11223588889999999999999999995 99999999999999 46678999999999
Q ss_pred eecCCCCce--eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 655 KLMGREHSQ--VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 655 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
+.+...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 876543221 1234568999999999877 468999999999999999999999996543
No 217
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-33 Score=301.91 Aligned_cols=246 Identities=22% Similarity=0.297 Sum_probs=191.5
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+...+.||+|+||+||++.. .+++.||+|.+..... .....+.+|++++.+++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 34557899999999999976 4688999999865322 2234577899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 82 MNGGDLKFHIYNM---GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred ccCccHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 9999999888432 234689999999999999999999984 9999999999999999999999999999765322
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. ......|+..|+|||++.+..++.++||||||+++|||++|+.||......... ...........
T Consensus 156 ~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~---~~~~~~~~~~~--------- 221 (285)
T cd05632 156 E--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR---EEVDRRVLETE--------- 221 (285)
T ss_pred C--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhhhccc---------
Confidence 1 122346899999999999999999999999999999999999999643221100 00001111000
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMG 771 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~ 771 (839)
..........+.+++..|++.+|++||++.
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 222 -EVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred -cccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 011112233467788889999999999943
No 218
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=301.35 Aligned_cols=240 Identities=26% Similarity=0.344 Sum_probs=192.8
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCCcch---HHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.||.|+||.||.++. .+.+.||||++.-.-.+.. .++..|++.|.+++|||++.+-|++..+...+||||||-|
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG- 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG- 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-
Confidence 4699999999999965 5788999999965444333 4688999999999999999999999999999999999965
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+-.++|. -..+++.+.++..|+.+.+.||+|||++ +.||||||+.||||++.|.|||+|||.|.+..+.
T Consensus 111 SAsDlle----VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA---- 179 (948)
T KOG0577|consen 111 SASDLLE----VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA---- 179 (948)
T ss_pred cHHHHHH----HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch----
Confidence 5555552 2356888999999999999999999996 8999999999999999999999999999876543
Q ss_pred EEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 665 VTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
..++|||.|||||++. .+.|+-|+||||||++..||.-.++|+-....-. +.-++.... .|.+.
T Consensus 180 -nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-------ALYHIAQNe-----sPtLq 246 (948)
T KOG0577|consen 180 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNE-----SPTLQ 246 (948)
T ss_pred -hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-------HHHHHHhcC-----CCCCC
Confidence 3467999999999885 4789999999999999999999998874322100 111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+....+..++-.|++.-|.+|||.+++++.
T Consensus 247 ---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 34556677888888999999999999998764
No 219
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-33 Score=304.06 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=199.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.+.+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++......++|+||+++
T Consensus 21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 100 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAG 100 (296)
T ss_pred EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCC
Confidence 55677899999999999965 57899999999765445566789999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|..++. ...+++.++..++.+++.||+|||+. +++|+||||+||+++.++.+||+|||++.........
T Consensus 101 ~~L~~~~~------~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 101 GSLTDVVT------ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred CcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 99999883 33589999999999999999999995 9999999999999999999999999998865433221
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||......... ........ +.+ .
T Consensus 172 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-------~~~~~~~~-----~~~--~ 236 (296)
T cd06655 172 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------YLIATNGT-----PEL--Q 236 (296)
T ss_pred -CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhcCC-----ccc--C
Confidence 22345888999999999988999999999999999999999999654321110 00000000 000 0
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+......+.+++.+||+.+|.+||++.++++.
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 111223356778889999999999999999864
No 220
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.8e-34 Score=322.28 Aligned_cols=262 Identities=21% Similarity=0.269 Sum_probs=187.8
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecC--------Cce
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--------SNR 574 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------~~~ 574 (839)
.|.+.++||+|+||.||+|.. .+++.||||++... .....+|+.+++.++||||+++++++... ...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 466788999999999999976 46889999988532 22345799999999999999998876321 246
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-ceeecccCc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-CPKVSDFGL 653 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGl 653 (839)
++||||+++ +|.+++... ......+++..+..++.||+.||+|||+. +|+||||||+||||+.++ .+||+|||+
T Consensus 143 ~lvmE~~~~-~l~~~~~~~-~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHY-ARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEecCCc-cHHHHHHHH-hhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecccc
Confidence 689999985 676665321 12345788999999999999999999995 999999999999998664 799999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhh-----hhhh
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWA-----FKEM 727 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~-----~~~~ 727 (839)
++.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+........ ...+
T Consensus 218 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 218 AKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred chhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 986543221 223457999999998876 46899999999999999999999999754322110000000 0000
Q ss_pred c--cCccc-----ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 728 T--NGTPL-----KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 728 ~--~~~~~-----~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
. ..... .+....+...++......+.+++.+||+.+|.+|||+.|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 00000 0000111111112233567889999999999999999998854
No 221
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-33 Score=308.16 Aligned_cols=201 Identities=21% Similarity=0.277 Sum_probs=170.1
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.++||+|+||.||+++.. +++.+|+|++.+.. ......+..|+.++..++|+||+++++++.+....++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 3566789999999999999875 47889999985421 1223457889999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++|+|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 82 y~~~g~L~~~l~~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 82 YYVGGDLLTLLSK----FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred ccCCCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 9999999999942 234688889999999999999999995 999999999999999999999999999976543
Q ss_pred CCceeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 3333333456999999999986 346889999999999999999999999643
No 222
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-33 Score=299.84 Aligned_cols=251 Identities=26% Similarity=0.346 Sum_probs=196.1
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.+.+.||+|+||.||+|... ++..+++|.+..........+.+|++++..++||||+++++++..+...++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 455678999999999999775 4778999998655444556788999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|..++.. ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++........
T Consensus 87 ~~l~~~~~~----~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~- 158 (282)
T cd06643 87 GAVDAVMLE----LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ- 158 (282)
T ss_pred CcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc-
Confidence 999988742 235689999999999999999999995 999999999999999999999999999976532211
Q ss_pred eEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
......++..|+|||++. +..++.++|||||||++|||++|+.||......+. ... ........+.
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~-~~~~~~~~~~-- 229 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLK-IAKSEPPTLA-- 229 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHH-HhhcCCCCCC--
Confidence 123345889999999884 34578899999999999999999999864321110 000 0000000000
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.+......+.+++.+||+.+|.+||++.++++.-
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 230 -----QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred -----CccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 1111234577888999999999999999987543
No 223
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.5e-33 Score=297.10 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=199.2
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+...+.||.|+||.||+|... +++.||+|.+.... ......+.+|+.++.+++||||+++++++.+....++||||++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence 445678999999999999764 58899999986442 2335678899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++. ...+++.+...++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 86 ~~~L~~~i~------~~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 86 GGSALDLLR------AGPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 999999883 2357888999999999999999998 4999999999999999999999999999987643321
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++..|+|||++.+..++.++||||||+++|||++|+.|+.......... ........
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----------------~~~~~~~~ 219 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF----------------LIPKNNPP 219 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh----------------hhhcCCCC
Confidence 1223457889999999998889999999999999999999999986433211100 00011112
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.........+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 2233455678889999999999999999999765
No 224
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-33 Score=295.24 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=198.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||+|+||.||++.. .+++.+|+|.++... ....+.+..|+.+++.++|+||+++++.+......+++|||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 45678999999999999976 468899999985432 2334578899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++... ....++....+.++.||+.||.|||+. +|+|+||||+||++++++.++|+|||++..+.....
T Consensus 82 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 82 GGDLMQKIKLQ---RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 99999988422 344678899999999999999999985 999999999999999999999999999986643222
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||....... . ......+...
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~-~~~~~~~~~~--------- 218 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------L-ILKVCQGSYK--------- 218 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------H-HHHHhcCCCC---------
Confidence 1223458889999999999899999999999999999999999996432110 0 0111111110
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+......+.+++.+||+.+|++||++.+++..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1111223457788899999999999999999864
No 225
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.7e-34 Score=301.36 Aligned_cols=252 Identities=29% Similarity=0.465 Sum_probs=196.8
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcch--HHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGE--KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||+||+++.. +++.+|+|.+........ ....+|+.++.+++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 356789999999999999775 466899999976533222 23456999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.++|. ....+++..+..++.||++||++||+. +|+|+||||+||++++++.++|+|||.+.... ..
T Consensus 81 ~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ-----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-EN 151 (260)
T ss_dssp TTEBHHHHHH-----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-ST
T ss_pred cccccccccc-----ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-cc
Confidence 9999999994 356789999999999999999999995 99999999999999999999999999998652 22
Q ss_pred ceeEEeeccccceeCccccc-CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVS-NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
........++..|+|||++. +...+.++||||+|+++++|++|..|+......... ......... ..... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~----~~~~~~~~~---~~~~~-~ 223 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL----EIIEKILKR---PLPSS-S 223 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH----HHHHHHHHT---HHHHH-T
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhh----hhhhhcccc---ccccc-c
Confidence 22334556899999999998 888999999999999999999999999744100000 000000000 00000 0
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.........+.+++..|++.+|++||++.++++
T Consensus 224 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 --QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp --TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred --cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000011267888899999999999999999975
No 226
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.2e-33 Score=298.12 Aligned_cols=247 Identities=26% Similarity=0.349 Sum_probs=198.5
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence 456788999999999999764 68899999986543 3334578899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++.......
T Consensus 83 ~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 83 GGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred CCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 9999999832 2789999999999999999999985 899999999999999999999999999987754322
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......++..|+|||++.+..++.++||||||+++|||++|+.||........ ......... +.+..
T Consensus 154 -~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-------~~~~~~~~~-----~~~~~ 220 (274)
T cd06609 154 -KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-------LFLIPKNNP-----PSLEG 220 (274)
T ss_pred -ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-------HHHhhhcCC-----CCCcc
Confidence 22334578899999999998899999999999999999999999964331110 011111110 11111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
. .....+.+++.+|++.+|++||+++++++.
T Consensus 221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred c---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1 023457788899999999999999999773
No 227
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2e-33 Score=297.20 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=195.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcc---------hHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHG---------EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
+.+.+.||+|+||.||+|.. .+++.+|+|.+....... .+.+.+|+.++.+++||||+++++++.+....
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 44677899999999999976 468899999886443221 14578899999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++|+||+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++
T Consensus 82 ~lv~e~~~~~~L~~~l~-----~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 82 NIFLEYVPGGSVAALLN-----NYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred EEEEEecCCCCHHHHHH-----hccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 99999999999999983 234678889999999999999999984 9999999999999999999999999999
Q ss_pred eecCCCCce-----eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 655 KLMGREHSQ-----VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 655 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
+........ ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~ 226 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-------IFKIGE 226 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH-------HHHHhc
Confidence 876422111 11223578899999999998899999999999999999999999964322110 000000
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+ ..+......+.+++.+||+.+|.+||++.+|++
T Consensus 227 -----~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -----NASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----cCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 112223456778888999999999999999976
No 228
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.6e-33 Score=299.91 Aligned_cols=262 Identities=23% Similarity=0.283 Sum_probs=189.1
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhcc---ccCCcccccceeec-----CCc
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSM---HHMNLVRLCGYCSE-----GSN 573 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~g~~~~-----~~~ 573 (839)
|.+.+.||+|+||.||+|.. .+++.||+|.++..... ....+.+|+.++.++ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 45678899999999999976 46899999998653222 223566777776665 79999999998764 345
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++ +|.+++... ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDKV---PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred EEEEEccccc-CHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 7899999984 888887432 234588999999999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc-chhh----hhhhhc
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF-YPGW----AFKEMT 728 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~-~~~~----~~~~~~ 728 (839)
++....... .....|+..|+|||++.+..++.++|||||||++|||++|+.||.......... .... ....+.
T Consensus 155 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 155 ARIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 987643221 223457899999999999899999999999999999999999986543211100 0000 000000
Q ss_pred cC-c-cccccccccc---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 729 NG-T-PLKVADRRLE---GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 729 ~~-~-~~~~~~~~l~---~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. . ......+... .....+....+.+++.+|++.||++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 0 0000000000 0011122345678999999999999999999875
No 229
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.5e-33 Score=296.46 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=196.1
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.+.||+|+||.||+|.. .+++.||+|.++.........+.+|+.++..++||||+++++.+......++|+||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 556678999999999999976 4688999999875544444568889999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++. ....+++.++..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 90 ~~~L~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 90 GGSLQDIYH-----VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred CCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 999999883 234688999999999999999999995 999999999999999999999999999976543221
Q ss_pred eeEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
......|+..|+|||++. ...++.++|||||||++|||++|+.|+......... .... ... ...+.
T Consensus 162 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~~~~-~~~---~~~~~ 230 (267)
T cd06645 162 -KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------FLMT-KSN---FQPPK 230 (267)
T ss_pred -ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------Hhhh-ccC---CCCCc
Confidence 123346899999999874 456889999999999999999999998533221110 0000 000 00000
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..... .....+.+++.+|++.+|++||++.+|++
T Consensus 231 ~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKDKM--KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccccC--CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 10000 11234678889999999999999999875
No 230
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.5e-33 Score=300.15 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=199.6
Q ss_pred HHhhccccccccCCCceEEEEEeC-CCc----EEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG-DGT----LVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 575 (839)
...+.+.+.||+|+||.||+|... +++ .+|+|.+..... ....++.+|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 345567789999999999999764 233 689998865533 334678899999999999999999999987 7889
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+|+||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++
T Consensus 85 ~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 85 LITQLMPLGCLLDYVRN----HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEecCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 99999999999999843 234589999999999999999999994 99999999999999999999999999998
Q ss_pred ecCCCCceeE-EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 656 LMGREHSQVV-TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 656 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
.......... ....++..|+|||.+....++.++||||||+++||+++ |+.||+.....+ ....+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~- 229 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-------IPDLLEKGER- 229 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHhCCCC-
Confidence 7653322211 11223568999999988899999999999999999998 999986432211 0111111110
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
...+......+.+++.+||..+|++||++.++++.|+...
T Consensus 230 --------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 230 --------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0011112235678888999999999999999999998753
No 231
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-34 Score=278.71 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=197.3
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC----cch----HHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP----HGE----KEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~----~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
.+.-.+.||+|..++|.+... .+|+..|+|++..... ... +.-..|+.+|+++ .||+|+++.++++....
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 345567899999999998855 5688999999853221 112 2356799999998 79999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++|+|.|+.|.|.++|. ....+++....+|+.|+..|+.|||.. .|+||||||+|||+|++.++||+|||+
T Consensus 98 ~FlVFdl~prGELFDyLt-----s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLT-----SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhcccchHHHHhh-----hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 999999999999999993 557899999999999999999999994 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccC------CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhh
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSN------RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEM 727 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 727 (839)
++.+.+ .......+||++|+|||.+.. ..|+...|+|+.|||+|.|+.|.+||..... ....+.+
T Consensus 170 a~~l~~--GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-------mlMLR~I 240 (411)
T KOG0599|consen 170 ACQLEP--GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-------MLMLRMI 240 (411)
T ss_pred eeccCC--chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-------HHHHHHH
Confidence 997643 233456789999999998853 4588999999999999999999999852110 0111222
Q ss_pred ccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 728 TNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 728 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+|+.. ....--.+......+++.+|++.||.+|-|.+|++..
T Consensus 241 meGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 241 MEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred Hhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 222211 1111112345567788999999999999999998753
No 232
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-33 Score=313.61 Aligned_cols=261 Identities=21% Similarity=0.192 Sum_probs=195.2
Q ss_pred HHhhccccccccCCCceEEEEEeC---CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG---DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
...+.+.+.||+|+||.||++... .+..||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 345778899999999999999653 3578999987542 34568999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
|++. ++|.+++. ....+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 166 e~~~-~~l~~~l~-----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 166 PKYK-CDLFTYVD-----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hhcC-CCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 9986 68888872 345789999999999999999999995 99999999999999999999999999998664
Q ss_pred CCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhc-------cC
Q 038743 659 REHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMT-------NG 730 (839)
Q Consensus 659 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 730 (839)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................+.+. ..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 43222 22345699999999999999999999999999999999999999965432210000000000000 00
Q ss_pred ccccc------ccccccCCCC-------HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 731 TPLKV------ADRRLEGAVE-------EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 731 ~~~~~------~~~~l~~~~~-------~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+ .......... ......+..++.+|++.+|++||++.|++..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 0000000000 0112346678889999999999999999775
No 233
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.2e-33 Score=294.99 Aligned_cols=246 Identities=26% Similarity=0.391 Sum_probs=196.2
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC-----CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-----PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
+.+.+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+.+++.++|+||+++++++.+....++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 345678999999999999875 78999999985432 123457889999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++++|.+++. ....+++..+..++.||+.||+|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 82 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 82 ELVPGGSLAKLLK-----KYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EecCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999983 234588999999999999999999985 99999999999999999999999999998754
Q ss_pred CCCceeEEeeccccceeCcccccCCC-CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRP-ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
... ......++..|+|||.+.... ++.++|+||||+++|||++|+.||....... ..........
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~------ 219 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA------AVFKIGRSKE------ 219 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH------HHHHHHhccc------
Confidence 332 223445888999999987776 8999999999999999999999986432111 0011000000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
....+......+.+++.+||+.+|++||++.++++
T Consensus 220 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 220 ---LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 01112223355678888999999999999999975
No 234
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-33 Score=309.02 Aligned_cols=190 Identities=23% Similarity=0.312 Sum_probs=161.8
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
..|.+.+.||+|+||.||+|... +++.||+|..... ....|+.++.+++||||+++++++.+....++|+||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 35677889999999999999774 5778999975432 2456899999999999999999999999999999998
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
. ++|.+++.. ....+++..+..|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 140 ~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 140 S-SDLYTYLTK----RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred C-CcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 5 688888742 345789999999999999999999995 99999999999999999999999999997532211
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCC
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNL 708 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~ 708 (839)
......||+.|+|||++.+..++.++|||||||++|||+++..++
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 123346899999999999999999999999999999999876555
No 235
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.4e-33 Score=303.35 Aligned_cols=198 Identities=23% Similarity=0.327 Sum_probs=159.8
Q ss_pred cccccCCCceEEEEEeC---CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceee--cCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLG---DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS--EGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lv~e~~~~ 583 (839)
.+||+|+||.||+|+.. ++..||+|.+... .....+.+|++++.+++||||+++++++. .....++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999864 3578999998653 22346789999999999999999999884 35677899999875
Q ss_pred CChhhhcccCC----CCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE----CCCCceeecccCcce
Q 038743 584 GSLDKWIFPSY----HHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL----DENFCPKVSDFGLAK 655 (839)
Q Consensus 584 gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill----~~~~~~kl~DfGla~ 655 (839)
+|.+++.... ......+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 6766663211 11234578889999999999999999995 99999999999999 567899999999998
Q ss_pred ecCCCCce--eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 656 LMGREHSQ--VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 656 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 76543222 1233468999999999876 458999999999999999999999996543
No 236
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2e-33 Score=296.82 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=195.9
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEecccCCc------chHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
+...+.||+|+||.||+|...+++.+|||.+...... ....+.+|++++++++|+||+++++++.+....++++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 3456789999999999998888999999988643211 1245888999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++++|.+++. +...+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.+||+|||++....
T Consensus 82 e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 82 EFVPGGSISSILN-----RFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred ecCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999983 224578899999999999999999985 89999999999999999999999999997643
Q ss_pred CCC-----ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 659 REH-----SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 659 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
... ........|+..|+|||++.+..++.++||||||++++||++|+.||......... ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-------~~~~~~--- 223 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM-------FYIGAH--- 223 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH-------HHhhhc---
Confidence 211 11122345889999999999988999999999999999999999999643211100 000000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
....+. .+......+..++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 224 RGLMPR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred cCCCCC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000111 12223445678889999999999999999875
No 237
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.2e-33 Score=298.86 Aligned_cols=250 Identities=24% Similarity=0.338 Sum_probs=196.8
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++.+......++||||++
T Consensus 13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (292)
T cd06644 13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP 92 (292)
T ss_pred hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence 4667789999999999999774 588999999976555556778999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|..++.+ ....+++..+..++.|++.+|+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 164 (292)
T cd06644 93 GGAVDAIMLE----LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL- 164 (292)
T ss_pred CCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-
Confidence 9999888742 234689999999999999999999985 99999999999999999999999999987543221
Q ss_pred eeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
.......++..|+|||++. ...++.++||||||+++|||++|+.||....... ..........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~----- 232 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKSEP----- 232 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-------HHHHHhcCCC-----
Confidence 1123345788999999885 3457889999999999999999999986432110 0011111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+.. ..+......+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 011122345778889999999999999999976
No 238
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.6e-33 Score=293.20 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=200.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||.||.++. .+++.+++|.+.... ....+++.+|+.++++++|+||+++++++.+....+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 45678999999999999865 568899999985432 334567889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++.++..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 82 NGGTLYDKIVRQ---KGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred CCCcHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999998432 245688999999999999999999985 89999999999999999999999999998764433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. .....+...
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~-~~~~~~~~~-------- 219 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LV-VKIVQGNYT-------- 219 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HH-HHHHcCCCC--------
Confidence 2 2233458899999999998889999999999999999999999986432211 01 111111110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.........+.+++.+|++.+|.+||++.++++.+
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 -PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 01122344577888899999999999999998753
No 239
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.9e-34 Score=309.19 Aligned_cols=240 Identities=22% Similarity=0.257 Sum_probs=182.7
Q ss_pred cccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhcc---ccCCcccccceeecCCceEEEEeeccC
Q 038743 511 LGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSM---HHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 511 lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
||+|+||+||+|+. .+++.||||++.+... .....+..|..++... +||||+++++.+.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999976 4689999999864321 1223355566666654 699999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|..++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~-----~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 81 GELFWHLQ-----KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred ChHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 99998883 345688999999999999999999995 999999999999999999999999999975422211
Q ss_pred eEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 664 VVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
......||+.|+|||.+.+. .++.++|||||||++|||++|+.||......+ ....+..+.. .+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-------~~~~i~~~~~------~~~~ 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-------MYRNIAFGKV------RFPK 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-------HHHHHHcCCC------CCCC
Confidence 12345689999999998764 58999999999999999999999996432111 1111111110 0111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPS----MGEVVK 775 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt----~~~v~~ 775 (839)
. .....+.+++.+||+.+|.+||+ +.++++
T Consensus 219 ~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 N---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred c---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 12234567888899999999994 555544
No 240
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.5e-33 Score=303.99 Aligned_cols=253 Identities=27% Similarity=0.428 Sum_probs=194.1
Q ss_pred hhccccccccCCCceEEEEEe-CCCc----EEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGT----LVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
.+...+.||+|+||.||+|.. .+++ .||+|.+..... ....++.+|+.++..++||||++++|++... ..+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence 334567899999999999975 3444 578998865432 2234688999999999999999999998754 56799
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
+||+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 87 ~e~~~~g~l~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 87 TQLMPHGCLLDYVHE----HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred ehhcCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 999999999999842 234678899999999999999999985 9999999999999999999999999999876
Q ss_pred CCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 658 GREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 658 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .. .....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~--- 229 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IP----DLLEKGER--- 229 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHCCCC---
Confidence 4322211 122335678999999999999999999999999999997 888886432111 00 11111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..........+.+++..||..+|++||+|.++++.|+..
T Consensus 230 ------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 230 ------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 000111234577889999999999999999999998754
No 241
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-33 Score=297.92 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=197.4
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+++.+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.+++||||+++++.+......++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 3567789999999999999875 68999999886432 223457889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|..++... .....+++..+..++.+|+.||.|||+. .+|+|+||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 82 DAGSLDKLYAGG--VATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred CCCCHHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999999988432 1134689999999999999999999974 489999999999999999999999999997653221
Q ss_pred ceeEEeeccccceeCcccccCC------CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNR------PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~------~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.||......... ........+.
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~---- 226 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF----AQLSAIVDGD---- 226 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH----HHHHHHhhcC----
Confidence 1223478899999988554 3588999999999999999999999643211100 0001111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+......+.+++.+|++.+|++||++.+++..
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 -----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 111223345567788999999999999999999874
No 242
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.8e-33 Score=294.89 Aligned_cols=247 Identities=25% Similarity=0.324 Sum_probs=187.8
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-----cchHHHHHHHHHhhccccCCcccccceeec--CCceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-----HGEKEFVTEVNTIGSMHHMNLVRLCGYCSE--GSNRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 576 (839)
+...+.||+|+||.||+|.. .++..||+|++..... .....+.+|+.++++++||||+++++++.+ ....++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 44568999999999999976 4688999998854321 123458889999999999999999998865 356789
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
++||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~e~~~~~~L~~~l~-----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 84 FMEYMPGGSVKDQLK-----AYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 999999999999984 234578899999999999999999985 899999999999999999999999999986
Q ss_pred cCCCCc--eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 657 MGREHS--QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 657 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
...... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........ .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~~----- 224 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIATQ----- 224 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhcC-----
Confidence 532111 112234578899999999998899999999999999999999999964321110 0000000
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+ ..+......+..+ .+|+..+|++||+|+||++
T Consensus 225 ~~~~----~~~~~~~~~~~~l-i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 225 PTNP----QLPSHISEHARDF-LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCC----CCchhcCHHHHHH-HHHhcCChhhCcCHHHHhc
Confidence 0011 1111112223333 4788899999999999965
No 243
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.8e-34 Score=313.32 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=170.2
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||++... +++.||||++.... ......+..|+.++.+++||||+++++.+.+....++||||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~ 82 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF 82 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 456789999999999999764 68999999986432 22345678899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++|+|.+++. ....+++.....++.||+.||.|||+. +|+||||||+||||+.++.+||+|||+++.....
T Consensus 83 ~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 83 LPGGDMMTLLM-----KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred CCCccHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 99999999984 345688999999999999999999994 9999999999999999999999999998754321
Q ss_pred Cc----------------------------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCC
Q 038743 661 HS----------------------------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRR 706 (839)
Q Consensus 661 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~ 706 (839)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 00113469999999999999999999999999999999999999
Q ss_pred CCCCC
Q 038743 707 NLDMS 711 (839)
Q Consensus 707 p~~~~ 711 (839)
||...
T Consensus 235 Pf~~~ 239 (360)
T cd05627 235 PFCSE 239 (360)
T ss_pred CCCCC
Confidence 99644
No 244
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.5e-33 Score=301.43 Aligned_cols=263 Identities=24% Similarity=0.307 Sum_probs=196.2
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
++.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..+...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 3556789999999999999875 5899999998643222 245688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|..+.. ....+++.++..++.||+.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~l~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 82 VDHTVLDDLEK-----YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred CCccHHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 99999988763 233589999999999999999999985 9999999999999999999999999999875433
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-c-------chhhhhhhhccCc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-F-------YPGWAFKEMTNGT 731 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-~-------~~~~~~~~~~~~~ 731 (839)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.. . +............
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 154 GE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred cc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 22 2223457889999998875 45788999999999999999999988643321100 0 0000000000000
Q ss_pred cc-ccccccccCC-----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 732 PL-KVADRRLEGA-----VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 732 ~~-~~~~~~l~~~-----~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. ....+..... ........+.+++.+||+.+|++||+|.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00 0000000000 01123456888999999999999999999875
No 245
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4e-33 Score=293.01 Aligned_cols=249 Identities=29% Similarity=0.484 Sum_probs=197.7
Q ss_pred cccccccCCCceEEEEEeCC-----CcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 507 FAQLLGTGGFGSVYKGSLGD-----GTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.||.|+||.||++...+ +..||+|++...... ..+.+..|+..+.+++|+||+++++++.+.+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 56789999999999997743 488999999655433 456899999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 83 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 83 MEGGDLLDYLRKN---RPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred cCCCCHHHHHHhh---hhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999998432 112289999999999999999999995 9999999999999999999999999999876543
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.........++..|+|||.+.+..++.++||||||++++||++ |+.||....... .......+..
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~------- 222 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-------VLEYLKKGYR------- 222 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCCC-------
Confidence 2222222337789999999988889999999999999999998 788876422110 0111111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
..........+.+++.+|++.+|++|||+.++++.|
T Consensus 223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 --LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011111344677899999999999999999999865
No 246
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.6e-33 Score=303.52 Aligned_cols=199 Identities=18% Similarity=0.198 Sum_probs=163.6
Q ss_pred cccccccC--CCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 507 FAQLLGTG--GFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 507 ~~~~lG~G--~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.++||+| +|++||++.. .+|+.||+|++..... .....+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7899999966 5789999999865422 22345778999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++++||+.........
T Consensus 82 ~~~~l~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTH---FMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 999999998432 234588999999999999999999985 99999999999999999999999998654332111
Q ss_pred ce------eEEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 662 SQ------VVTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 662 ~~------~~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
.. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 10 0112346778999999876 46899999999999999999999999643
No 247
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3e-33 Score=299.71 Aligned_cols=244 Identities=23% Similarity=0.352 Sum_probs=194.5
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChh
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
..||+|+||.||++.. .++..||||.+........+.+.+|+.++..++|+||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 5799999999999976 468899999986554445567889999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEe
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 667 (839)
+++. ...+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++......... ...
T Consensus 108 ~~~~------~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~ 177 (292)
T cd06658 108 DIVT------HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKS 177 (292)
T ss_pred HHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-Cce
Confidence 9883 23578999999999999999999995 9999999999999999999999999999765432221 223
Q ss_pred eccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHH
Q 038743 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEE 747 (839)
Q Consensus 668 ~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 747 (839)
..|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... ...+.+.. ...
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~~~~~~-----~~~~~~~~--~~~ 243 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-------MRRIRD-----NLPPRVKD--SHK 243 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHh-----cCCCcccc--ccc
Confidence 4588999999999888899999999999999999999999864322110 011100 01111111 011
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 748 ELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 748 ~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+..++.+|++.+|.+|||++++++.
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 22346677788999999999999999875
No 248
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5e-33 Score=293.11 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=200.7
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.+.||.|+||.||++.. .+++.+++|.+........+.+.+|+.++++++||||+++++++.+....+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 456778999999999999976 4578999999976555556789999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++.. ....+++.++..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++........
T Consensus 84 ~~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 84 GGSLQDIYQV----TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCcHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 9999998842 225688999999999999999999985 999999999999999999999999999986543221
Q ss_pred eeEEeeccccceeCcccccCC---CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR---PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~---~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
......++..|+|||.+... .++.++||||||+++|||++|+.||......... ...... ......
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-------~~~~~~---~~~~~~ 225 (262)
T cd06613 157 -KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-------FLISKS---NFPPPK 225 (262)
T ss_pred -ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhc---cCCCcc
Confidence 12234578899999999776 8899999999999999999999998643321110 000000 000000
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+ .........+.+++.+||+.+|.+||++.+|+.
T Consensus 226 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 L--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 112233456889999999999999999999975
No 249
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.4e-33 Score=300.09 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=195.3
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
...||+|+||.||++.. .+++.||+|.+........+.+.+|+.++..++||||+++++++..+...++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 34799999999999976 46899999998654444556788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
..++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........ ...
T Consensus 106 ~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~ 175 (297)
T cd06659 106 TDIVS------QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRK 175 (297)
T ss_pred HHHHh------hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-ccc
Confidence 98772 34688999999999999999999985 899999999999999999999999999876543222 122
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...|+..|+|||++.+..++.++||||||++++||++|+.||......+. ...+........ ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~-------~~~~ 241 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-------MKRLRDSPPPKL-------KNAH 241 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHhccCCCCc-------cccC
Confidence 34588999999999988899999999999999999999999864322110 011111100000 0011
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.....+.+++..|++.+|++||++.+|++.
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 122346778888999999999999999884
No 250
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=283.32 Aligned_cols=247 Identities=24% Similarity=0.321 Sum_probs=206.4
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+++..+||+|+||.||++.+ ..|+.||||.+.- ..+..++..|+.++++...|++|+++|.+.....+++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 45567999999999999966 4699999998854 45678899999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|++.+.+. .+++.|.+.++..++...++||+|||.. .-||||||+.||||+-+|.+||+|||.|..+.+....
T Consensus 113 GSiSDI~R----~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK 185 (502)
T KOG0574|consen 113 GSISDIMR----ARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK 185 (502)
T ss_pred CcHHHHHH----HhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence 99999984 4678999999999999999999999996 6799999999999999999999999999877554443
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCC-CccchhhhhhhhccCcccccccccccC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAE-DFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
. ..+.||+.|||||++..-.|..++||||||+...||..|++|+.....-. .+.+| .. +....
T Consensus 186 R-NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP--------T~-------PPPTF 249 (502)
T KOG0574|consen 186 R-NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP--------TK-------PPPTF 249 (502)
T ss_pred h-CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc--------CC-------CCCCC
Confidence 3 44569999999999999999999999999999999999999996433211 11111 11 11111
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+.+....+-+++..|+-..|++|-|+.++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 2244556778889999999999999999888764
No 251
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5e-33 Score=292.13 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=198.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||.||++.. .+++.||+|++.... ....+++.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 45678999999999999965 468999999986432 233457899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++... ....+++.+++.++.|++.||.|||+. +++|+||+|+|||++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 82 EGGDLYKKINAQ---RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999988432 234578899999999999999999984 99999999999999999999999999998764322
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.. .....|++.|+|||++.+..++.++||||||++++||++|+.||...... ...... ..+..
T Consensus 156 ~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~-~~~~~--------- 218 (256)
T cd08218 156 EL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKI-IRGSY--------- 218 (256)
T ss_pred hh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHH-hcCCC---------
Confidence 11 12334788999999999999999999999999999999999998632211 111111 11110
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+......+.+++.+|++.+|++||+|.+|++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 01122334567888999999999999999999863
No 252
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.5e-33 Score=301.96 Aligned_cols=264 Identities=20% Similarity=0.267 Sum_probs=193.9
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
..|.+.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++.+++||||+++++++......++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 34667789999999999999764 68899999986432 22334678899999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
++ ++|.+++.. ....+++..+..++.||++||+|||+. +|+|+||||+|||+++++.+||+|||++......
T Consensus 86 ~~-~~l~~~l~~----~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 86 LD-KDLKQYLDD----CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred cc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 97 588888742 234678899999999999999999994 9999999999999999999999999999764332
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhhhhhhccCc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWAFKEMTNGT 731 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~~~~~~~~~ 731 (839)
.. ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.... ....+..+....
T Consensus 158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 158 TK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 21 1222346889999998865 4578899999999999999999999965432110000 000000000000
Q ss_pred -ccccccccccCC----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 732 -PLKVADRRLEGA----VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 732 -~~~~~~~~l~~~----~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
......+..... ........+.+++.+|++.+|.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000000 00112335678899999999999999999986
No 253
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.7e-33 Score=299.67 Aligned_cols=264 Identities=25% Similarity=0.320 Sum_probs=198.6
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
.+.+.+.||+|+||.||+|... +++.||||.++... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3567789999999999999775 58899999986432 22346789999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
++++.|..++. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 82 VERTLLELLEA-----SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred CCCCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 99877776552 234588999999999999999999985 9999999999999999999999999999876554
Q ss_pred CceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhhhhhhc-cC
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWAFKEMT-NG 730 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~~~~~~-~~ 730 (839)
.........++..|+|||++.+. .++.++||||||+++|||++|+.||......+.... +......+. ..
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 33233345578899999999888 889999999999999999999999864432110000 000000000 00
Q ss_pred cc-----ccccccc-ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TP-----LKVADRR-LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~-----~~~~~~~-l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. ....+.. .....+......+.+++.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 0000000 000011122566888999999999999999999975
No 254
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.7e-33 Score=297.47 Aligned_cols=262 Identities=23% Similarity=0.290 Sum_probs=196.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++.+++|+||+++++++......++||||+
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~ 82 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC 82 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence 556788999999999999875 58999999985432 223456889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+++.|..++. ....+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~-----~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 83 DHTVLNELEK-----NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred CccHHHHHHh-----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 9999988763 234689999999999999999999995 99999999999999999999999999998764432
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch-----hhhh--hh-hccCcc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP-----GWAF--KE-MTNGTP 732 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~-----~~~~--~~-~~~~~~ 732 (839)
. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+..... .+.. .. +.....
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 155 D-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred c-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 2 1223347788999999876 56789999999999999999999999654322110000 0000 00 000000
Q ss_pred -cccccccccCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 -LKVADRRLEGAVE-----EEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 -~~~~~~~l~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.....+......+ ......+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000000 112356788999999999999999999875
No 255
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.3e-33 Score=296.90 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=197.8
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.+.||.|+||.||++... +++.+|+|.+..........+..|++++++++||||+++++.+......++||||++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence 3667788999999999999774 688999999875544455678999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++.. ....+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++........
T Consensus 86 ~~~L~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 86 GGALDSIMLE----LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred CCcHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 9999998842 234689999999999999999999995 999999999999999999999999999876533222
Q ss_pred eeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
......++..|+|||.+. ...++.++||||||+++|||++|+.||....... ....+.....
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~----- 225 (280)
T cd06611 159 -KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-------VLLKILKSEP----- 225 (280)
T ss_pred -ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-------HHHHHhcCCC-----
Confidence 223345889999999875 3457889999999999999999999986432111 0011111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+.+ ..+......+.+++..||+.+|.+||++.+|++.
T Consensus 226 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 0111223456778889999999999999999764
No 256
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-32 Score=295.95 Aligned_cols=263 Identities=24% Similarity=0.262 Sum_probs=195.7
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc-----chHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH-----GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
+.+.+.||+|+||.||+|.. .+++.||||.+...... ....+..|++++.+++|+||+++++++.+....++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 45667899999999999976 46899999999654322 2345778999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+ +|+|.+++... ...+++..+..++.||++||.|||+. +|+|+||||+|||++.++.+||+|||+++...
T Consensus 82 e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 82 EFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred ccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 999 99999998432 23689999999999999999999995 99999999999999999999999999998764
Q ss_pred CCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh-----hhhhhcc-Cc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW-----AFKEMTN-GT 731 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~-----~~~~~~~-~~ 731 (839)
.... ......++..|+|||.+.+ ..++.++||||||++++||++|..+|....+.+......- ....+.. ..
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 154 SPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred CCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccc
Confidence 4322 1222346788999998865 4678999999999999999999877754332110000000 0000000 00
Q ss_pred ccccccccccCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEGAV-----EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
............. .......+.+++.+|++.+|++||++.+|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000011 11234567899999999999999999999986
No 257
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.3e-33 Score=305.98 Aligned_cols=261 Identities=23% Similarity=0.265 Sum_probs=191.5
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC------c
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS------N 573 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~ 573 (839)
..|.+.+.||+|+||.||++.. .+++.||||++.... .....++.+|+.++..++||||+++++++.... .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4567788999999999999976 468999999986432 233456889999999999999999999886443 4
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++ +|...+. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 101 VYLVMELMDA-NLCQVIH-------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eEEEEeCCCc-CHHHHHh-------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 7999999975 5555552 2477888899999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc-------ch--hh--
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF-------YP--GW-- 722 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~-------~~--~~-- 722 (839)
++...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .+ .+
T Consensus 170 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 97643221 1233468999999999999999999999999999999999999997543211000 00 00
Q ss_pred ----hhhhhccCc-------cccccccccc---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 723 ----AFKEMTNGT-------PLKVADRRLE---GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 723 ----~~~~~~~~~-------~~~~~~~~l~---~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+.... ..+....... ..........+.+++.+|++.+|++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000 0000000000 00011123457788999999999999999999875
No 258
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-32 Score=295.65 Aligned_cols=250 Identities=25% Similarity=0.366 Sum_probs=200.2
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
..+.+.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++.+......++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4566778999999999999965 468899999986544445567899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~------~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 99 AGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCcHHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 9999999983 23578889999999999999999985 99999999999999999999999999987654332
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.. .....+++.|+|||.+....++.++||||||+++||+++|+.||........... ....+.. .
T Consensus 170 ~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~~~--------~ 234 (293)
T cd06647 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNGTP--------E 234 (293)
T ss_pred cc-cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCCCC--------C
Confidence 22 2234588899999999888899999999999999999999999965432211100 0000000 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..........+.+++..||+.+|++||++.+++..
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111223456778889999999999999999876
No 259
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.4e-33 Score=298.40 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=193.1
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|++|.||+|... +++.||||++.... ......+.+|+.++.+++||||+++++++.++...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 456688999999999999774 68999999986432 222356889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+ ++|.+++... .....+++..+..++.||+.||+|||+. +++|+||||+|||++.++.+||+|||++.......
T Consensus 82 ~-~~l~~~~~~~--~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 82 S-MDLKKYLDSL--PKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred C-CCHHHHHhcC--CCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 7 6888887432 2235789999999999999999999985 99999999999999999999999999998654322
Q ss_pred ceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc--------chhhhhhhhccC-c
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF--------YPGWAFKEMTNG-T 731 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~--------~~~~~~~~~~~~-~ 731 (839)
.......+++.|+|||.+.+. .++.++||||||++++||++|+.||.......... ...-.+...... .
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 112223468899999988654 57899999999999999999999997543211000 000000000000 0
Q ss_pred ccccccccccC---CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 732 PLKVADRRLEG---AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 732 ~~~~~~~~l~~---~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
........... .........+.+++.+|++.+|++|||+.+|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000 000012345678899999999999999999975
No 260
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.1e-33 Score=291.91 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=196.9
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|...+.||+|+||.||+|.. .+++.||+|.+...... ..+.+..|+.++++++|+||+++++.+...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 45568999999999999976 46889999998654332 4567899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ....+++..+..++.+++.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 82 SGGTLEELLE-----HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCcHHHHHh-----hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 9999999984 234578889999999999999999985 99999999999999999999999999998765433
Q ss_pred ceeE---EeeccccceeCcccccCCC---CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 662 SQVV---TMVRGTRGYLAPEWVSNRP---ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 662 ~~~~---~~~~gt~~y~aPE~~~~~~---~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.... ....++..|+|||++.+.. ++.++||||||++++|+++|+.||........ .... ...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-----~~~~-~~~~~---- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-----IMFH-VGAGH---- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-----HHHH-HhcCC----
Confidence 2221 1345788999999998766 89999999999999999999999964321110 0000 00000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.+.+.. .......+.+++.+|++.+|.+||++.+++.
T Consensus 224 -~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 -KPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -CCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001100 0112445678889999999999999999864
No 261
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=291.43 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=207.0
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
-|++.+.||+|.|..|-++++ -+|+.||||++.+.... ....+..|++.|+.++|||||+|+.+...+..+|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 366778999999999999965 47999999999765332 345789999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE-CCCCceeecccCcceecCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL-DENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill-~~~~~~kl~DfGla~~~~~ 659 (839)
-.+|+|.+||.. ....+++....+++.||+.|+.|+|+. .++||||||+||.+ .+-|-+||.|||++-.+.+
T Consensus 99 GD~GDl~DyImK----He~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 99 GDGGDLFDYIMK----HEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred cCCchHHHHHHh----hhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999953 456788899999999999999999995 99999999999876 5678999999999987643
Q ss_pred CCceeEEeeccccceeCcccccCCCCC-CcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPIT-VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
.+..+..+|...|-|||++.+..|+ ++.||||||||||.|++|+.||+...+.+.. ..++|=
T Consensus 172 --G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL---------------TmImDC 234 (864)
T KOG4717|consen 172 --GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL---------------TMIMDC 234 (864)
T ss_pred --cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh---------------hhhhcc
Confidence 3345667899999999999998886 6899999999999999999999866655432 112332
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
. -.++.-....+.+++..|++.||.+|.+.+|++..
T Consensus 235 K--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 235 K--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred c--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2 12344556678899999999999999999999865
No 262
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.3e-33 Score=307.07 Aligned_cols=260 Identities=23% Similarity=0.291 Sum_probs=192.7
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------Cc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SN 573 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 573 (839)
..|.+.+.||+|+||.||++.. ..++.||||++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 4567788999999999999975 468899999996532 22345688999999999999999999987543 35
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++ +|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred EEEEEeCCCC-CHHHHHH-------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 7999999975 6666662 2477888999999999999999984 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc---------chhhhh
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF---------YPGWAF 724 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~---------~~~~~~ 724 (839)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+.+ .
T Consensus 173 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (364)
T cd07875 173 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF-M 249 (364)
T ss_pred ccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH-H
Confidence 98654321 1233468999999999999999999999999999999999999996543211100 0000 0
Q ss_pred hhhc-------cCcc-------cccccccc---cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 725 KEMT-------NGTP-------LKVADRRL---EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 725 ~~~~-------~~~~-------~~~~~~~l---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+. .... ..+....+ ...........+.+++.+|++.||.+|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000 00000000 000111123467889999999999999999999885
No 263
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=7.9e-33 Score=290.80 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=196.8
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec-CCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-GSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~ 580 (839)
|.+.+.||+|++|.||++... +++.||+|++.... ....+.+..|++++++++|+|++++++.+.. ....+++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 567789999999999999764 57899999986432 2334568899999999999999999988764 4457899999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++... ....+++.++..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++..+...
T Consensus 82 ~~~~~l~~~l~~~---~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 82 CEGGDLYHKLKEQ---KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999998532 234689999999999999999999984 9999999999999999999999999999876432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. ......+++.|+|||.+.+..++.++||||||++++||++|+.||...... ... .....+..
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~-~~~~~~~~-------- 219 (257)
T cd08223 156 CD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLV-YRIIEGKL-------- 219 (257)
T ss_pred CC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHH-HHHHhcCC--------
Confidence 22 223345889999999999999999999999999999999999998643211 111 11111111
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+......+.+++.+|++.+|++||++.++++.
T Consensus 220 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 -PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11122334567889999999999999999999763
No 264
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=328.17 Aligned_cols=261 Identities=21% Similarity=0.325 Sum_probs=197.2
Q ss_pred chHHHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec--
Q 038743 496 TYRDLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-- 570 (839)
Q Consensus 496 ~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-- 570 (839)
...+.....|.+.+.||+|+||+||++.. ..++.||+|.+.... ......+..|+.++.+|+|||||++++++.+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 33455566788889999999999999976 457789999886432 2234568899999999999999999998754
Q ss_pred CCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhcc----CCeeeecCCCCCcEEECC----
Q 038743 571 GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC----RNRIIHCDIKPENILLDE---- 642 (839)
Q Consensus 571 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~iiH~dlk~~Nill~~---- 642 (839)
....+|||||+++|+|.++|.... .....+++..++.|+.||+.||+|||+.. ..+||||||||+||||+.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~-~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCY-KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 456899999999999999985321 12346899999999999999999999842 135999999999999964
Q ss_pred -------------CCceeecccCcceecCCCCceeEEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCC
Q 038743 643 -------------NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRN 707 (839)
Q Consensus 643 -------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p 707 (839)
...+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||||||||||++|+.|
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccccccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 34589999999987643221 233468999999999864 4588999999999999999999999
Q ss_pred CCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 708 LDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
|....... .....+.... .+.. ......+.+++..||+.+|.+||++.+++.
T Consensus 243 F~~~~~~~------qli~~lk~~p-------~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 243 FHKANNFS------QLISELKRGP-------DLPI---KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcCCcHH------HHHHHHhcCC-------CCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 96432211 0111111110 0100 112345778888999999999999999984
No 265
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.5e-33 Score=294.85 Aligned_cols=256 Identities=26% Similarity=0.383 Sum_probs=195.2
Q ss_pred ccccccccCCCceEEEEEeC----CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC------c
Q 038743 506 NFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS------N 573 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~ 573 (839)
.+.++||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45678999999999999753 36899999986542 233456889999999999999999999886532 2
Q ss_pred eEEEEeeccCCChhhhcccCCC-CCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYH-HRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
.++++||+++|+|..++..... .....+++.....++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECccc
Confidence 4788999999999988753321 122357888999999999999999998 499999999999999999999999999
Q ss_pred cceecCCCCcee-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 653 LAKLMGREHSQV-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 653 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
+++......... .....++..|++||.+....++.++||||||+++|||++ |+.||......+ . .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~----~~~~~~~ 231 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---I----YNYLIKG 231 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---H----HHHHHcC
Confidence 998654322111 122335678999999998899999999999999999999 888875332111 0 0111111
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.. + .........+.+++.+|++.+|++||++.+|++.|++.
T Consensus 232 ~~-------~--~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR-------L--KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc-------C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0 00112345788899999999999999999999999753
No 266
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-33 Score=284.07 Aligned_cols=251 Identities=23% Similarity=0.269 Sum_probs=202.8
Q ss_pred hhccccccccCCCceEEEEEeCC-CcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
..++.+.||.|.-|+||++++.+ +..+|+|++.+.. .....+...|.+||+.++||.|+.|+..++..+..++|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 33456789999999999998854 5899999997654 3334567889999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
||+||+|..++. .+.++.+++....-++..++-||+|||-. |||.|||||+||||.++|++-|+||.|+.....
T Consensus 158 yCpGGdL~~Lrq---kQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 158 YCPGGDLHSLRQ---KQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred cCCCccHHHHHh---hCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999998874 34678899999999999999999999996 999999999999999999999999998853310
Q ss_pred ---------------------------------CCc----------------------eeEEeeccccceeCcccccCCC
Q 038743 660 ---------------------------------EHS----------------------QVVTMVRGTRGYLAPEWVSNRP 684 (839)
Q Consensus 660 ---------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~ 684 (839)
... ......+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 000 0011246899999999999999
Q ss_pred CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCC
Q 038743 685 ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEV 764 (839)
Q Consensus 685 ~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p 764 (839)
.+.++|.|+|||+||||+.|+.||.+....+.+ ..++-..+...-.++....+.++|...|..||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl---------------~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETL---------------RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhH---------------HHHhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence 999999999999999999999999876654322 12222222222223445667788888999999
Q ss_pred CCCCC----HHHHHH
Q 038743 765 FMRPS----MGEVVK 775 (839)
Q Consensus 765 ~~RPt----~~~v~~ 775 (839)
.+|-. +.||.+
T Consensus 377 ~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhccccchHHhhc
Confidence 99998 666654
No 267
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.6e-33 Score=294.09 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=193.8
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc----------chHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH----------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
...+.||+|+||.||+|.. .+++.||+|.++..... ..+.+.+|+.++.+++||||+++++++......
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL 83 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce
Confidence 3467899999999999965 46899999987532110 123578899999999999999999999999999
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +++||||+|+||+++.++.++|+|||++
T Consensus 84 ~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 84 SIFLEYVPGGSIGSCLRT-----YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred EEEEecCCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999842 24688899999999999999999985 9999999999999999999999999999
Q ss_pred eecCCCCcee-EEeeccccceeCcccccCCC--CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 655 KLMGREHSQV-VTMVRGTRGYLAPEWVSNRP--ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 655 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
+......... .....|+..|+|||.+.... ++.++||||||+++||+++|+.||......+. ..+ .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~-~~~~~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA------MFK-LGNKR 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH------HHH-hhccc
Confidence 8654322211 23345889999999987654 89999999999999999999999853221110 000 00000
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+.. .........+.+++..|++.+|++||+|.+|++.
T Consensus 229 ~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0001111 1112234567788889999999999999999763
No 268
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-32 Score=294.58 Aligned_cols=255 Identities=23% Similarity=0.327 Sum_probs=194.0
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceee-----cCCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCS-----EGSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-----~~~~~~ 575 (839)
.++.+.+.||+|+||.||++.. .+++.+|+|.++.. .....++.+|+.++.++ +||||+++++++. .+...+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 3456678999999999999976 46889999988643 22345688899999999 6999999999874 345689
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+++++|.+++.... .....+++..+..++.|+++||.|||+. +++||||||+||++++++.+||+|||+++
T Consensus 97 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFL-KRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSA 172 (286)
T ss_pred EEEeecCCCCHHHHHHHhh-ccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCcee
Confidence 9999999999999874321 2335678889999999999999999985 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
....... ......|++.|+|||++.. ..++.++|||||||++|||++|+.|+......... ......
T Consensus 173 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-------~~~~~~ 244 (286)
T cd06638 173 QLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-------FKIPRN 244 (286)
T ss_pred ecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-------hhcccc
Confidence 6643221 1223458999999998853 45788999999999999999999998643221100 000000
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
......++ ......+.+++.+|++.+|++||++.||++.+
T Consensus 245 ~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 245 PPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00001111 11123577889999999999999999998753
No 269
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.7e-33 Score=309.07 Aligned_cols=261 Identities=23% Similarity=0.257 Sum_probs=192.1
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecC------Cc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SN 573 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 573 (839)
..|.+.+.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 4566778999999999999965 4688999999965422 2335678899999999999999999987543 35
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+++ +|.+++. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~lv~e~~~~-~l~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred eEEEhhhhcc-cHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 7999999975 5666552 2478888999999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc---------chhhhh
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF---------YPGWAF 724 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~---------~~~~~~ 724 (839)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+.+..
T Consensus 166 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 166 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98653321 1233468999999999999999999999999999999999999996543111000 000000
Q ss_pred ------hhhccC--ccccccccc-----c---cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 725 ------KEMTNG--TPLKVADRR-----L---EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 725 ------~~~~~~--~~~~~~~~~-----l---~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+.+. ....+..+. + ...........+.+++.+|++.+|++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000 000000000 0 000111223567889999999999999999999985
No 270
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.5e-33 Score=296.38 Aligned_cols=264 Identities=23% Similarity=0.301 Sum_probs=198.5
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56678999999999999976 468999999986543 223467899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+++|.+++... ...+++.++..++.||++||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 82 -PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred -CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99999988432 35689999999999999999999985 99999999999999999999999999998765443
Q ss_pred ceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch--------hhhhhhhccC-c
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP--------GWAFKEMTNG-T 731 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~--------~~~~~~~~~~-~ 731 (839)
........++..|+|||.+.+. .++.++||||||++++||++|+.+|....+....... ...+....+- .
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 2223345688999999988654 4689999999999999999998877543321100000 0000000000 0
Q ss_pred cccccccccc----CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLE----GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~----~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+..+... .....+....+.+++.+|++.+|.+||+++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 00011223678889999999999999999999763
No 271
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1e-32 Score=291.44 Aligned_cols=247 Identities=23% Similarity=0.300 Sum_probs=190.1
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--C---cchHHHHHHHHHhhccccCCcccccceeecC--CceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--P---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l 576 (839)
+.+.+.||+|+||.||+|.. .+++.||||.+.... . ...+.+.+|+.++.+++||||+++++++.+. ...++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 45678999999999999976 458999999885321 1 1234678899999999999999999988663 46789
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
+|||+++++|.+++. ....+++.....++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.
T Consensus 84 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 84 FMEHMPGGSIKDQLK-----SYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEecCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 999999999999884 224578888999999999999999985 899999999999999999999999999986
Q ss_pred cCCCCc--eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 657 MGREHS--QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 657 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
...... .......++..|+|||.+.+..++.++||||||+++|||++|+.||....... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~------ 222 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIA------ 222 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-------HHHHHh------
Confidence 532211 11223458889999999988889999999999999999999999986332111 000000
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
........+......+..++.+|+. +|++||++++|++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 223 --TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred --cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0001112233344556677777885 8999999999975
No 272
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.4e-32 Score=292.36 Aligned_cols=247 Identities=23% Similarity=0.318 Sum_probs=197.2
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+.+.+.||+|+||.||+|.. .+++.||||.+.... ......+.+|+.++.+++||||+++++++.++...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 355667899999999999976 468899999886432 223456889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ...+++..+..++.|++.+|.|||+ .+++|+||+|+||+++.++.++|+|||++..+....
T Consensus 85 ~~~~l~~~i~------~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 85 GGGSALDLLE------PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 9999999883 2368899999999999999999998 499999999999999999999999999998654322
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
. ......++..|+|||.+.+..++.++||||||+++|||++|..|+....... ......... .
T Consensus 156 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~---------~ 218 (277)
T cd06641 156 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-------VLFLIPKNN---------P 218 (277)
T ss_pred h-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-------HHHHHhcCC---------C
Confidence 1 1223457889999999988889999999999999999999999986432111 000011110 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..........+.+++.+|++.+|.+||+|.++++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11112233457788899999999999999999984
No 273
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.1e-33 Score=301.76 Aligned_cols=197 Identities=27% Similarity=0.407 Sum_probs=168.6
Q ss_pred hhccccccccCCCceEEEE-EeCCCcEEEEEEecccCCcchHHHHHHHHHhhccc-c-----CCcccccceeecCCceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-H-----MNLVRLCGYCSEGSNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~~~~~l 576 (839)
+|.+.+.||+|+||.|.|+ +..+++.||||++++. ..-..+...|+++|..|+ | -|+|++++++...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 6788899999999999999 5677999999999865 333456778999999986 3 389999999999999999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC--CCceeecccCcc
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE--NFCPKVSDFGLA 654 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~--~~~~kl~DfGla 654 (839)
|+|.+.. +|.++|... +-..|+...+..|+.||+.||.+||+ .+|||+||||+||||.+ .-.+||+|||.+
T Consensus 266 VfELL~~-NLYellK~n---~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNN---KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eehhhhh-hHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccc
Confidence 9999854 999999644 44568999999999999999999998 49999999999999964 347999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
......- ....-++-|.|||++.+.+|+.+.||||||||+.||++|.+.|-+..
T Consensus 339 c~~~q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 339 CFESQRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred cccCCcc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 8754322 24446778999999999999999999999999999999987776544
No 274
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.9e-32 Score=291.44 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=195.7
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccc---cCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMH---HMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e 579 (839)
|.+.+.||+|+||.||+|.. .+++.||+|.+.... .....++.+|+.++++++ |||++++++++.++...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 44567899999999999976 578999999986542 333457889999999986 9999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++. ...+++.....++.|++.||.|||+. +|+|+||+|+||++++++.++|+|||++..+..
T Consensus 83 ~~~~~~L~~~~~------~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 83 YAEGGSVRTLMK------AGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred cCCCCcHHHHHH------ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999883 23688999999999999999999985 999999999999999999999999999987654
Q ss_pred CCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
... ......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... ..... ..+
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-------~~~~~-----~~~ 220 (277)
T cd06917 154 NSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-------LIPKS-----KPP 220 (277)
T ss_pred Ccc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-------ccccC-----CCC
Confidence 332 2233468899999998875 457899999999999999999999996433211100 00000 001
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+... .....+.+++.+|++.+|++||++.++++.
T Consensus 221 ~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 221 RLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 11111 133457788889999999999999999763
No 275
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1e-32 Score=299.45 Aligned_cols=250 Identities=25% Similarity=0.285 Sum_probs=196.5
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||++... +++.||+|.+...... ..+.+..|++++..++|+||+++++.+.+....++||||
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY 82 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence 556788999999999999775 4899999999654322 345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+.+++|.+++... ....+++..+..++.||++||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~L~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 83 CPGGELFRLLQRQ---PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred cCCCCHHHHHHhC---CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999988422 345789999999999999999999985 9999999999999999999999999998754321
Q ss_pred Cce----------------------------eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 661 HSQ----------------------------VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 661 ~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
... ......|+..|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 110 0112357889999999999889999999999999999999999996433
Q ss_pred CCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCC----HHHHHH
Q 038743 713 DAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPS----MGEVVK 775 (839)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt----~~~v~~ 775 (839)
.... ... +................+.+++.+|++.+|++||+ +.+++.
T Consensus 237 ~~~~-------~~~--------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RDET-------FSN--------ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHHH-------HHH--------HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 2110 000 11111111111114566888999999999999999 555555
No 276
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.6e-33 Score=291.91 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=198.6
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||+|+||.||++... +++.||+|.+.... .....++.+|++++++++||||+++++.+......++++||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 455678999999999999775 68999999986543 2345678999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+++|.+++... ...++...+..++.|++.||+|||+. .+++|+||||+||++++++.+||+|||++........
T Consensus 83 ~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 83 GGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 99999998432 25788899999999999999999982 3899999999999999999999999999876533222
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
.. ..++..|+|||++.+..++.++||||||++++||++|+.||......... .. ...+....+.. .
T Consensus 157 ~~---~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~-~~~~~~~~~~~---------~ 222 (265)
T cd06605 157 KT---FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IF-ELLQYIVNEPP---------P 222 (265)
T ss_pred hc---ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-HH-HHHHHHhcCCC---------C
Confidence 11 55888999999999999999999999999999999999999644321110 00 00111111100 0
Q ss_pred CCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 743 AVEEE-ELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 743 ~~~~~-~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..... ....+.+++..|++.+|++||++.+++..
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11111 34457788899999999999999999753
No 277
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.7e-33 Score=304.94 Aligned_cols=257 Identities=23% Similarity=0.274 Sum_probs=189.3
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecC------Cce
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNR 574 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~ 574 (839)
.|.+.+.||+|+||.||++.. .+++.||||++..... .....+.+|++++.+++||||+++++++... ...
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07878 16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV 95 (343)
T ss_pred hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence 455678999999999999975 5688999999865322 2235677899999999999999999987543 456
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++++|++ +++|.+++. ...+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 96 ~~~~~~~-~~~l~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 96 YLVTNLM-GADLNNIVK------CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred EEEeecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 8999987 788988772 34688999999999999999999995 9999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc-c-------hhhhhh
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF-Y-------PGWAFK 725 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~-~-------~~~~~~ 725 (839)
+..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......... . ......
T Consensus 166 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 166 RQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred eecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 865432 223458999999999877 578999999999999999999999996432111000 0 000000
Q ss_pred hhccCcccccccccccCCCCH--------HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 726 EMTNGTPLKVADRRLEGAVEE--------EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 726 ~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+.......... .+. ..+. .....+.+++.+|++.+|.+|||+.++++.
T Consensus 242 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 242 KISSEHARKYIQ-SLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hcchhhHHHHhh-ccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 000 0000 012246788999999999999999999864
No 278
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-32 Score=290.26 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=197.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC------cchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP------HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
+...+.||+|+||.||++.. .+++.||+|.+..... ...+.+..|++++++++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 34567899999999999975 5789999999864321 1235688999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-ceeecccCccee
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-CPKVSDFGLAKL 656 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGla~~ 656 (839)
+||+++++|.+++. ....+++..+..++.||+.||.|||+. +++|+||+|+||+++.++ .+||+|||++..
T Consensus 82 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 82 VEWMAGGSVSHLLS-----KYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EeccCCCcHHHHHH-----HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 99999999999984 234688899999999999999999995 999999999999998775 599999999987
Q ss_pred cCCCCce---eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 657 MGREHSQ---VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 657 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
+...... ......++..|+|||.+.+..++.++||||+|++++||++|+.||......... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~-------- 222 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFK-------- 222 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHH--------
Confidence 6433111 112345788999999998888999999999999999999999998643221111 00000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..........+......+.+++.+|++.+|++||++.++++
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 223 -IASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -HhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00001112233344566788999999999999999999974
No 279
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-33 Score=321.22 Aligned_cols=263 Identities=24% Similarity=0.351 Sum_probs=205.2
Q ss_pred HHHHHhhccccccccCCCceEEEEEeC--------CCcEEEEEEecccCCc-chHHHHHHHHHhhcc-ccCCccccccee
Q 038743 499 DLQIRTSNFAQLLGTGGFGSVYKGSLG--------DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSM-HHMNLVRLCGYC 568 (839)
Q Consensus 499 ~l~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~g~~ 568 (839)
++......+.+.||+|.||.|++|.+. ....||||+++..... ..+.+..|+++|..+ +|+||+.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 333444456679999999999999752 1457999999765433 456799999999998 799999999999
Q ss_pred ecCCceEEEEeeccCCChhhhcccCC---------CCCc--ccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCc
Q 038743 569 SEGSNRLLVYEFMKNGSLDKWIFPSY---------HHRD--RVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPEN 637 (839)
Q Consensus 569 ~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~N 637 (839)
......++|+||+..|+|.+||.... .... ..|.....+.++.|||.||+||++. ++|||||.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 99999999999999999999997654 1111 2388999999999999999999995 89999999999
Q ss_pred EEECCCCceeecccCcceecCCCCceeEEeec--cccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCC
Q 038743 638 ILLDENFCPKVSDFGLAKLMGREHSQVVTMVR--GTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDA 714 (839)
Q Consensus 638 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~ 714 (839)
||+.++..+||+|||+|+...+.......... -...|||||.+....|+.|+|||||||+||||++ |..|+......
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 99999999999999999965554444333222 3566999999999999999999999999999996 56666431101
Q ss_pred CCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 715 EDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
.-..+.+++|. +...+......+.+++..||+.+|++||++.++++.|+.
T Consensus 529 ------~~l~~~l~~G~---------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 529 ------EELLEFLKEGN---------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred ------HHHHHHHhcCC---------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 11122333322 112233345566788888999999999999999999986
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.5e-32 Score=289.74 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=202.3
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||+|++|.||++... +++.||||++..... ....++.+|+..+.+++|+||+++++++......++|+||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 456789999999999999775 489999999876543 345679999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhh-ccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHE-QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+++|.+++.. ...+++..++.++.|+++||+|||+ . +++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 83 GGSLADLLKK-----VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999942 2578999999999999999999998 6 99999999999999999999999999998764433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||........... ........ .
T Consensus 155 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~----~~~~~~~~---------~ 220 (264)
T cd06623 155 DQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL----MQAICDGP---------P 220 (264)
T ss_pred Cc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHH----HHHHhcCC---------C
Confidence 22 1234578899999999999999999999999999999999999965432110000 01111100 0
Q ss_pred CCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEE-ELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~-~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+.. ....+.+++.+|++.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111122 34578888899999999999999999874
No 281
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-34 Score=305.73 Aligned_cols=245 Identities=27% Similarity=0.407 Sum_probs=192.5
Q ss_pred cccccccCCCceEEEEEe-CCCcEEEEEEe--cccC--CcchHHHHHHHHHhhccccCCcccccceeecCCc--eEEEEe
Q 038743 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKL--DRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN--RLLVYE 579 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l--~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--~~lv~e 579 (839)
|..+||+|+|-+||||.. .+|..||--.+ ++.. +.....|..|+.+|+.|+||||++++....+... ..+|.|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 456899999999999965 35666764433 2222 3334679999999999999999999999877655 788999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMG 658 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~ 658 (839)
.|..|+|..|+. +.+.++.+.+..++.||++||.|||++ .++|||||||..||+|+. .|.|||+|+|||.+..
T Consensus 124 L~TSGtLr~Y~k-----k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 124 LFTSGTLREYRK-----KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred cccCCcHHHHHH-----HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 999999999994 456788889999999999999999996 689999999999999975 5899999999999876
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
...... +.|||.|||||+.. ..|...+||||||++++||+|+..|+...... ....+++..|....-+
T Consensus 198 ~s~aks---vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~------AQIYKKV~SGiKP~sl-- 265 (632)
T KOG0584|consen 198 KSHAKS---VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP------AQIYKKVTSGIKPAAL-- 265 (632)
T ss_pred ccccce---eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH------HHHHHHHHcCCCHHHh--
Confidence 544332 67999999999776 88999999999999999999999999644322 1223333333221111
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..+. ...+.++|.+|+.. ..+||++.|+++.
T Consensus 266 ---~kV~---dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 ---SKVK---DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---hccC---CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1111 23466788889999 9999999999863
No 282
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-32 Score=290.30 Aligned_cols=260 Identities=25% Similarity=0.306 Sum_probs=197.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecC--CceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e~ 580 (839)
+.+.+.||.|++|.||++.. .+++.+|+|.+..... ....++.+|++++++++||||+++++++.+. ...++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 44567999999999999987 4688999999865432 3456789999999999999999999988653 468999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++.... .....++...+..++.||+.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 83 ~~~~~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 83 CEGGSLDSIYKKVK-KRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred cCCCCHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 99999998874321 2345678889999999999999999995 9999999999999999999999999998754322
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. ....++..|+|||.+.+..++.++||||||+++|||++|+.||......... .... ...........+.+ ..
T Consensus 159 ~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~-~~ 232 (287)
T cd06621 159 LA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG-PIEL-LSYIVNMPNPELKD-EP 232 (287)
T ss_pred cc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC-hHHH-HHHHhcCCchhhcc-CC
Confidence 21 2334788999999999999999999999999999999999999754321000 0000 01111101101100 00
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.. .......+.+++.+||+.+|.+||||.||++.
T Consensus 233 ~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 233 GN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00 01234567899999999999999999999873
No 283
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.2e-32 Score=287.21 Aligned_cols=247 Identities=22% Similarity=0.382 Sum_probs=196.4
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
|.+.+.||+|+||.||++.. .+++.+|||.+.... ......+.+|++++++++||||+++++.+......++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 45678999999999999966 468899999986432 233567889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC-CceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~-~~~kl~DfGla~~~~~~ 660 (839)
++++|.+++... ....+++..+..++.+++.||+|||+. +++|+||||+||+++++ ..+||+|||++......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 82 PGGTLAEYIQKR---CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999532 244588999999999999999999995 99999999999999854 46899999999876432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||....... .... ...+..
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~-~~~~~~-------- 218 (256)
T cd08220 156 SK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA------LVLK-IMSGTF-------- 218 (256)
T ss_pred cc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH------HHHH-HHhcCC--------
Confidence 21 122457889999999998889999999999999999999999986432211 1111 111100
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+......+.+++.+||+.+|++|||+.++++
T Consensus 219 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 219 -APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0111123445778899999999999999999976
No 284
>PTZ00284 protein kinase; Provisional
Probab=99.98 E-value=5.3e-33 Score=317.41 Aligned_cols=260 Identities=20% Similarity=0.277 Sum_probs=186.2
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccc------cCCcccccceeecC-Cce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH------HMNLVRLCGYCSEG-SNR 574 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~~~-~~~ 574 (839)
..|.+.++||+|+||+||+|.. ..++.||||+++.. .....++..|+.++..++ |++++++++++... .+.
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4566788999999999999976 46889999999653 222345566777776665 44588888888654 568
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC----------
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF---------- 644 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~---------- 644 (839)
++|||++ +++|.+++. ....+++..+..|+.||+.||.|||+. .+||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~-----~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIM-----KHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred EEEEecc-CCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccc
Confidence 8899887 778888874 234689999999999999999999973 4899999999999998765
Q ss_pred ------ceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc
Q 038743 645 ------CPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF 718 (839)
Q Consensus 645 ------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~ 718 (839)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+...
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred cCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 499999998864322 1234568999999999999999999999999999999999999997654321111
Q ss_pred chhhhhh----hhcc----Ccccccccc--cccCCC---------------CHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 038743 719 YPGWAFK----EMTN----GTPLKVADR--RLEGAV---------------EEEELMRAMKVAFWCIQDEVFMRPSMGEV 773 (839)
Q Consensus 719 ~~~~~~~----~~~~----~~~~~~~~~--~l~~~~---------------~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v 773 (839)
....... .+.. .....+.+. .+.... .......+++++.+||+.||++|||++|+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 0000000 0000 000000000 000000 00123457789999999999999999999
Q ss_pred HH
Q 038743 774 VK 775 (839)
Q Consensus 774 ~~ 775 (839)
++
T Consensus 436 L~ 437 (467)
T PTZ00284 436 TT 437 (467)
T ss_pred hc
Confidence 87
No 285
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=1.2e-32 Score=290.53 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=199.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec--CCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE--GSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e 579 (839)
|.+.+.||.|+||.||++.. .+++.||+|.+.... ....+.+..|++++++++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 45678899999999999965 568899999986432 2234568889999999999999999997753 456789999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhcc--CCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC--RNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|+++++|.+++... ......+++..++.++.||+.||+|||..+ ..+++|+||||+||++++++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~-~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKC-KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHH-hhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998532 123457899999999999999999999332 359999999999999999999999999999876
Q ss_pred CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
...... .....++..|+|||.+.+..++.++||||||+++++|++|+.||....... ..+....+.
T Consensus 161 ~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~------ 226 (265)
T cd08217 161 GHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ-------LASKIKEGK------ 226 (265)
T ss_pred cCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH-------HHHHHhcCC------
Confidence 543321 223458899999999999889999999999999999999999997433110 011111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+......+.+++.+|++.+|++||++.+|++.
T Consensus 227 ---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 ---FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 112223344677889999999999999999999864
No 286
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.98 E-value=2.9e-32 Score=288.10 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=199.9
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+.+.+.||.|+||+||+|.. .++..+|+|++.... ......+.+|+++++.++|+||+++++.+......++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 356778999999999999975 468899999986432 234567899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++.... ....+++.....++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 82 SGGSLLDIMKSSY--PRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred CCCcHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999985321 124688999999999999999999985 99999999999999999999999999998665432
Q ss_pred ce---eEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 662 SQ---VVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 662 ~~---~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
.. ......|+..|+|||.+... .++.++||||||+++|||++|+.||......+.. ....... .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~-------~~~~~~~-----~ 224 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL-------MLTLQND-----P 224 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH-------HHHhcCC-----C
Confidence 22 12334588999999998877 7899999999999999999999999643321100 0000000 0
Q ss_pred ccccCCC-CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 738 RRLEGAV-EEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 738 ~~l~~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+.+.... .......+.+++.+|++.+|++||++.+|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111111 0123456778888999999999999999976
No 287
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.98 E-value=1.8e-32 Score=292.49 Aligned_cols=250 Identities=26% Similarity=0.405 Sum_probs=192.0
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeec------CCce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSE------GSNR 574 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~------~~~~ 574 (839)
..+.+.+.||+|+||.||+|.. .+++.+|+|.+... .....++..|+.++.++ +|+||+++++++.. ....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 3456678999999999999976 56889999998543 23345688899999998 79999999999853 4578
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
+++|||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+|+||||+||++++++.++|+|||++
T Consensus 95 ~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~ 168 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNT---KGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 168 (282)
T ss_pred EEEEEeCCCCcHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcch
Confidence 9999999999999988432 234577888899999999999999995 9999999999999999999999999998
Q ss_pred eecCCCCceeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
........ ......|+..|+|||.+. ...++.++||||||+++|||++|+.||.......... ....
T Consensus 169 ~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-------~~~~ 240 (282)
T cd06636 169 AQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-------LIPR 240 (282)
T ss_pred hhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-------hHhh
Confidence 76532211 122345888999999876 3467889999999999999999999996432211100 0000
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. .+.+ ........+.+++..||+.+|.+||++.|+++
T Consensus 241 ~~-----~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 NP-----PPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CC-----CCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 0000 01122346788899999999999999999865
No 288
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.98 E-value=1.6e-32 Score=293.06 Aligned_cols=262 Identities=20% Similarity=0.267 Sum_probs=192.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||+|.. .+|+.||+|+++... ......+.+|+.++.+++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 45678899999999999976 468999999986432 222356788999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+ ++|.+++.. ....+++..+..++.||++||.|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 82 ~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 82 D-QDLKKYFDS----CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred C-CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 7 578777632 234689999999999999999999995 99999999999999999999999999998654322
Q ss_pred ceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc---------chhhhhhhhc---
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF---------YPGWAFKEMT--- 728 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~---------~~~~~~~~~~--- 728 (839)
. ......++..|+|||.+.+. .++.++||||||+++|||++|+.|+....+..... .....+....
T Consensus 154 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 154 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred C-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 1 12233578899999988764 47899999999999999999999874332211000 0000000000
Q ss_pred cCccccccccccc-CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 729 NGTPLKVADRRLE-GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 729 ~~~~~~~~~~~l~-~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
............. ..........+.+++.+|++.+|.+|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000000000 0001122356678899999999999999999975
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.98 E-value=3.1e-32 Score=294.28 Aligned_cols=246 Identities=26% Similarity=0.299 Sum_probs=192.4
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.+.+.+.||+|+||.||+|... +++.||+|.+..... ...+++.+|++++..++||||+++.+++.+....++|+|
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 3566789999999999999764 689999999854322 223568899999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|++ |+|.+++.. ....+++..+..++.|++.||.|||+. +|+|+||+|+||++++++.+||+|||++.....
T Consensus 96 ~~~-g~l~~~~~~----~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 96 YCL-GSASDILEV----HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred hhC-CCHHHHHHH----cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 997 567666632 234689999999999999999999985 999999999999999999999999999976533
Q ss_pred CCceeEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
.. ...++..|+|||.+. ...++.++||||||+++|||++|+.||........ . ........
T Consensus 168 ~~-----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~-~~~~~~~~---- 231 (307)
T cd06607 168 AN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------L-YHIAQNDS---- 231 (307)
T ss_pred CC-----CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------H-HHHhcCCC----
Confidence 21 235788999999874 45688999999999999999999999864321110 0 00000000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
+.+ ........+.+++.+||+.+|++||+|.+|+...
T Consensus 232 -~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 232 -PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000 0112345678889999999999999999998754
No 290
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.5e-33 Score=294.76 Aligned_cols=278 Identities=23% Similarity=0.313 Sum_probs=209.0
Q ss_pred hccccccccCCCceEEEEEeCC-CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+++.-.||-|+||.||++...+ +-..|-|.+.-........|+-|++||+...||+||+|++.+..++.++|+.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 3455679999999999997654 445677888766666677899999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|-++..+.. -++.|.+.++.-++.|++.||.|||+. .|||||||+.|||++-+|.++|+|||.+-..... .+
T Consensus 114 GAVDaimlE----L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~q 185 (1187)
T KOG0579|consen 114 GAVDAIMLE----LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQ 185 (1187)
T ss_pred chHhHHHHH----hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH-Hh
Confidence 999988743 467899999999999999999999995 9999999999999999999999999998643221 12
Q ss_pred eEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
....+.||+.|||||++. ..+|+.++||||||+.|.||.-+.+|..... |..+.-.+....+..++.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-------pMRVllKiaKSePPTLlq- 257 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-------PMRVLLKIAKSEPPTLLQ- 257 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-------hHHHHHHHhhcCCCcccC-
Confidence 234567999999999875 4789999999999999999999988864221 111111121111111222
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCCCCCCchhhHHHhhhchhhHHHhhh
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADINTPPMPQTVLELIEEGLDHVYKAMK 808 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 808 (839)
+......+.++..+|+..+|..||++.++++.=-- -..|.. ..+...+.+....+.+++.
T Consensus 258 ------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv---~~~~Sn-K~ireLlAEakAeV~EEve 317 (1187)
T KOG0579|consen 258 ------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV---QNAPSN-KMIRELLAEAKAEVQEEVE 317 (1187)
T ss_pred ------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccc---ccCCcc-hHHHHHHHHHHHHHHHHhh
Confidence 12334456677778999999999999999764211 112222 4455555555555554444
No 291
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.98 E-value=2.9e-32 Score=291.20 Aligned_cols=244 Identities=24% Similarity=0.368 Sum_probs=195.5
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
.+.||+|++|.||++.. .+++.+++|++........+.+.+|+.++..++||||+++++++......++++||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 46999999999999975 56889999998654444456788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+++.. ..+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||++......... ..
T Consensus 104 ~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~-~~ 173 (285)
T cd06648 104 TDIVTH------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR-RK 173 (285)
T ss_pred HHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc-cc
Confidence 998832 4688899999999999999999995 9999999999999999999999999988765432221 22
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...|+..|+|||.+.+..++.++||||||+++|||++|+.||....... .......... +.+.. ..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-------~~~~~~~~~~-----~~~~~--~~ 239 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-------AMKRIRDNLP-----PKLKN--LH 239 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-------HHHHHHhcCC-----CCCcc--cc
Confidence 3458899999999998889999999999999999999999986432111 0111111100 00100 11
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.....+.+++.+|++.+|++||++.++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 12346788899999999999999999985
No 292
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=1.8e-32 Score=293.01 Aligned_cols=262 Identities=23% Similarity=0.270 Sum_probs=195.8
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC--CceEEEEee
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVYEF 580 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e~ 580 (839)
.+.+.||.|+||.||+|+.. +++.+|+|++.... ......+.+|++++.+++|+|++++++++.+. ...++|+||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 45678999999999999775 58899999997653 22345688999999999999999999999887 899999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++ +|.+++.. ....+++..++.++.||+.||+|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 82 ~~~-~l~~~~~~----~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 82 MDH-DLTGLLDS----PEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccc-cHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 975 88888742 225789999999999999999999985 8999999999999999999999999999877554
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch--------hhhhhhhcc--
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP--------GWAFKEMTN-- 729 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~--------~~~~~~~~~-- 729 (839)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||............ ...+..+..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 3322333456888999998765 46789999999999999999999999654321100000 000000000
Q ss_pred ----CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 ----GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 ----~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..........+...........+.+++..|++.+|.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000111111112557889999999999999999999976
No 293
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.98 E-value=3e-32 Score=292.12 Aligned_cols=263 Identities=24% Similarity=0.329 Sum_probs=192.0
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+.+.+.||+|++|.||+|... +++.||||.+...... ....+.+|++++++++|+||+++++++.+....++||||+
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYL 85 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecC
Confidence 4566789999999999999764 6899999998654322 2345778999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++ +|.+++.. ....+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~-~L~~~~~~----~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 86 DT-DLKQYMDD----CGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CC-CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 85 89888742 234678899999999999999999985 99999999999999999999999999987543211
Q ss_pred ceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCC-ccch--------hhhhhhhccC-
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED-FFYP--------GWAFKEMTNG- 730 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~-~~~~--------~~~~~~~~~~- 730 (839)
. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ .... ...+......
T Consensus 158 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred c-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 1 1122246788999998875 5688999999999999999999999964431100 0000 0000000000
Q ss_pred ---c-ccccc-cccccCCC-CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 ---T-PLKVA-DRRLEGAV-EEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ---~-~~~~~-~~~l~~~~-~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
. ..... ...+.... .......+.+++.+|++.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000 00000000 0011256678899999999999999999875
No 294
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=3.1e-32 Score=290.68 Aligned_cols=251 Identities=24% Similarity=0.386 Sum_probs=189.9
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHH-hhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNT-IGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||++... +|+.||+|+++... .....++..|+.. ++.++||||+++++++......+++|||+
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM 82 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence 456788999999999999764 68999999986543 2334456667665 55568999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+ |+|.+++.... .....+++..++.++.||+.||+|||+. .+++||||||+|||++.++.+||+|||+++.+....
T Consensus 83 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 83 D-TSLDKFYKKVY-DKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV 158 (283)
T ss_pred c-ccHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 6 68888774322 2335789999999999999999999983 389999999999999999999999999998653321
Q ss_pred ceeEEeeccccceeCcccccC----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSN----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....... .. ......+. .
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~--~~~~~~~~-----~ 225 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF----QQ--LKQVVEEP-----S 225 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH----HH--HHHHHhcC-----C
Confidence 1223457889999998865 456889999999999999999999985322110 00 00000110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+.+. .......+.+++.+|++.+|++||++.+|++
T Consensus 226 ~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 PQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110 0112345778888999999999999999976
No 295
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=2.1e-32 Score=292.86 Aligned_cols=255 Identities=26% Similarity=0.374 Sum_probs=191.2
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++.++. |+||+++++++..+...+++|||+.
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~ 86 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD 86 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence 3456899999999999976 458999999986432 234457889999999996 9999999999999999999999986
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
. +|.++...........+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 87 I-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred C-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 4 554433111111335688999999999999999999974 4899999999999999999999999999976533221
Q ss_pred eeEEeeccccceeCcccccCC---CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR---PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~---~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.....|+..|+|||.+.+. .++.++||||||+++|||++|+.||...... .. .......+. .+.
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~-~~~~~~~~~-----~~~ 230 (288)
T cd06616 164 --KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-----FD-QLTQVVKGD-----PPI 230 (288)
T ss_pred --cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH-----HH-HHhhhcCCC-----CCc
Confidence 1223578899999998776 6899999999999999999999998633210 00 000110010 111
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+...........+.+++.+|++.+|++||++.+|++.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111112344567889999999999999999999764
No 296
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=4.8e-32 Score=294.10 Aligned_cols=253 Identities=24% Similarity=0.279 Sum_probs=195.6
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+...+.||+|+||.||+++. .+++.||+|++..... ....++.+|++++++++|||++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 44567899999999999976 4688999999864322 2234688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
++ |+|.+++.. ....+++.++..++.||+.||.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 107 CL-GSASDLLEV----HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CC-CCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 97 477776632 234689999999999999999999985 9999999999999999999999999998754332
Q ss_pred CceeEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVAD 737 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (839)
....|+..|+|||++. .+.++.++||||||+++|||++|+.||........ ........
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~~~~~~~~------ 240 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-------LYHIAQNE------ 240 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-------HHHHHhcc------
Confidence 2235788999999874 45789999999999999999999999864321110 00110000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCCC
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADINT 785 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~~ 785 (839)
............+.+++.+|++.+|.+||++.+|++.+.-....+.
T Consensus 241 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 241 --SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred --CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence 0001111233457788899999999999999999987655444333
No 297
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.98 E-value=4.2e-32 Score=291.01 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=193.6
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecC-----CceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG-----SNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-----~~~~l 576 (839)
.+.+.+.||+|+||.||++.. .+++.+|+|.+... .....++.+|+.++.++ +|||++++++++... ...++
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence 355677999999999999976 56889999998653 22345678899999998 899999999998653 35899
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
|+||+++++|.+++.... .....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++..
T Consensus 102 v~ey~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 102 VLELCNGGSVTELVKGLL-ICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred EEEECCCCcHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 999999999999884321 2345688999999999999999999985 999999999999999999999999999986
Q ss_pred cCCCCceeEEeeccccceeCcccccCC-----CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVSNR-----PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
....... .....|+..|+|||.+... .++.++||||||+++|||++|+.||........ ........
T Consensus 178 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-------~~~~~~~~ 249 (291)
T cd06639 178 LTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-------LFKIPRNP 249 (291)
T ss_pred ccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-------HHHHhcCC
Confidence 5432211 1234578899999988653 368999999999999999999999864322110 00111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+.+ ..+....+.+++.+|++.+|++||++.++++.
T Consensus 250 ~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 250 PPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111111 11233457889999999999999999999763
No 298
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=2.3e-32 Score=287.51 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=197.6
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||.|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.++...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 456789999999999999875 589999999965322 3356789999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++. ....+++..+..++.||++||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~L~~~l~-----~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 82 LLGGDLRYHLS-----QKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCHHHHHH-----hcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999983 224788999999999999999999985 8999999999999999999999999999865433
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. ......|+..|+|||.+....++.++||||||+++|+|++|+.||....... .......... .
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~----------~ 217 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET----------A 217 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------c
Confidence 2 2233458889999999998889999999999999999999999997543211 1111111110 0
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSM--GEVV 774 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~--~~v~ 774 (839)
....+......+.+++.+|++.+|.+||++ +|++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111122233667788899999999999999 5543
No 299
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=1.7e-32 Score=289.30 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=195.1
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||.||++... +++.+|+|.+..... .....+.+|++++.+++||||+++++.+..+...++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 489999999865432 3345788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc----
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS---- 662 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~---- 662 (839)
.+++.. ...+++..+..++.||+.||+|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLEN-----VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 999842 23689999999999999999999985 999999999999999999999999999876433211
Q ss_pred ---eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 663 ---QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 663 ---~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
.......++..|+|||.+.....+.++||||||++++||++|+.||......+ .......+.
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~-------- 217 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-------IFQNILNGK-------- 217 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCC--------
Confidence 12233457889999999988889999999999999999999999986433111 011111110
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
............+.+++.+|++.+|.+||++.+|.+.|+.
T Consensus 218 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 0000000124567788899999999999999888777753
No 300
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=4.5e-32 Score=294.37 Aligned_cols=267 Identities=19% Similarity=0.220 Sum_probs=194.9
Q ss_pred hccccccccCCCceEEEEEeC---CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecC--CceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG---DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l 576 (839)
+.+.++||+|+||.||+|... +++.||+|.+.... ......+.+|+.++.+++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 456788999999999999764 47899999997632 23345678899999999999999999999888 78999
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC----CCceeecccC
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE----NFCPKVSDFG 652 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~----~~~~kl~DfG 652 (839)
||||+++ +|.+++..........++...+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999975 666666433222334788899999999999999999985 8999999999999999 9999999999
Q ss_pred cceecCCCCce--eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--h----
Q 038743 653 LAKLMGREHSQ--VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--A---- 723 (839)
Q Consensus 653 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~---- 723 (839)
+++........ ......++..|+|||.+.+ ..++.++||||||++++||++|+.||...........+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 99876443221 1223457889999998766 4589999999999999999999999975543221000000 0
Q ss_pred hhhhc-----------cC-cccccccccccCCCC---------H--HHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 724 FKEMT-----------NG-TPLKVADRRLEGAVE---------E--EELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 724 ~~~~~-----------~~-~~~~~~~~~l~~~~~---------~--~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+. +. ......+.......+ . .....+.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00 000000000000000 0 22346788999999999999999999975
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=3.2e-32 Score=293.95 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=197.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||++... .++.||+|.+..... .....+.+|++++..++||||+++++.+..+...++||||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence 456789999999999999764 578999999865421 2235678999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 83 VEGGDCATLLK-----NIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred CCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 99999999983 234688999999999999999999984 9999999999999999999999999998742111
Q ss_pred Cc--------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhh
Q 038743 661 HS--------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 661 ~~--------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
.. .......++..|+|||.+....++.++||||||+++|||++|+.||......+ ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-------~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------LFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHH
Confidence 00 00112357889999999988889999999999999999999999986332111 1111
Q ss_pred hccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 727 MTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
...+. ...+... ......+.+++.+|++.+|++||++.++.+.|+..
T Consensus 228 ~~~~~---~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 228 VISDD---IEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHhcc---cCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 11110 0111111 12234567889999999999999988888877653
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=3.9e-32 Score=286.44 Aligned_cols=242 Identities=23% Similarity=0.294 Sum_probs=192.4
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||.|+||.||+++.. +++.+|+|.+..... ...+.+.+|++++++++||||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 799999999999875 489999999865322 2345789999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+++. +...+++..+..++.||+.||+|||+. +++|+||+|+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~~l~-----~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~ 150 (262)
T cd05572 81 WTILR-----DRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTW 150 (262)
T ss_pred HHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccc
Confidence 99984 234588899999999999999999994 99999999999999999999999999998764432 122
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...++..|+|||.+.+..++.++|+||||+++|||++|+.||....... .. .... +.+.......+.
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~-~~~~--------~~~~~~~~~~~~ 217 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----ME-IYND--------ILKGNGKLEFPN 217 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HH-HHHH--------HhccCCCCCCCc
Confidence 3457889999999988889999999999999999999999996443210 00 0111 111011111222
Q ss_pred HHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPS-----MGEVVK 775 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt-----~~~v~~ 775 (839)
.....+.+++..||+.+|++||+ +.|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 22456888999999999999999 555544
No 303
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=3.7e-32 Score=290.33 Aligned_cols=262 Identities=23% Similarity=0.293 Sum_probs=192.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+...+.||.|+||.||+|+. .+++.||||++.... ......+.+|++++.+++||||+++++++.+....++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 34567899999999999976 468999999986432 222356889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
. ++|.+++... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~-~~l~~~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 82 H-QDLKKFMDAS---PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred c-cCHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 6 6888888432 345688999999999999999999985 99999999999999999999999999987654322
Q ss_pred ceeEEeeccccceeCcccccCCC-CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc-chh-------hhhh---hhcc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRP-ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF-YPG-------WAFK---EMTN 729 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~-~~~-------~~~~---~~~~ 729 (839)
.. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.......... ... ..+. .+.+
T Consensus 155 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 155 RT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred cc-cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 11 22234678899999887644 6889999999999999999999996443211000 000 0000 0000
Q ss_pred --CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 --GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 --~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..........+.. ........+.+++.+|++.+|.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 234 YKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000000 00111234668899999999999999999975
No 304
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=4.8e-32 Score=290.36 Aligned_cols=241 Identities=25% Similarity=0.329 Sum_probs=194.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++++.++...++||||
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY 82 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence 566789999999999999764 68999999986432 12345688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++. ....++...+..++.||+.||.|||+ .+++|+||+|+|||++.++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~~~-----~~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 83 VPGGELFSHLR-----KSGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred CCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 99999999984 33578899999999999999999999 49999999999999999999999999999876443
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.....+++.|+|||.+.+...+.++||||||+++|||++|+.||...... ...+....+..
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-------- 215 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-------QIYEKILEGKV-------- 215 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCc--------
Confidence 22345889999999998888999999999999999999999998643311 01111111110
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVV 774 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~ 774 (839)
..+......+.+++.+||+.+|.+|| ++++++
T Consensus 216 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 216 --RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 11112235667888899999999999 555554
No 305
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.6e-32 Score=314.54 Aligned_cols=204 Identities=19% Similarity=0.255 Sum_probs=158.8
Q ss_pred HHHhhccccccccCCCceEEEEEeCC--CcEEEEEEe--------------cc---cCCcchHHHHHHHHHhhccccCCc
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLGD--GTLVAVKKL--------------DR---VLPHGEKEFVTEVNTIGSMHHMNL 561 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l--------------~~---~~~~~~~~~~~E~~~l~~l~h~ni 561 (839)
....|.+.+.||+|+||+||++.... +...++|.+ .+ ........+.+|+.++.+++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34568888999999999999986532 222222211 00 011223457899999999999999
Q ss_pred ccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC
Q 038743 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD 641 (839)
Q Consensus 562 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~ 641 (839)
+++++++...+..++|+|++. ++|.+++..................++.||+.||+|||+. +|+||||||+||||+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 5677766433211122233556778999999999999995 999999999999999
Q ss_pred CCCceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCC
Q 038743 642 ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNL 708 (839)
Q Consensus 642 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~ 708 (839)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999877544333333456999999999999999999999999999999999988543
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=3.8e-32 Score=291.93 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=191.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhcc-ccCCcccccceeecCCc-----eE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN-----RL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~-----~~ 575 (839)
+.+.+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++..+ +||||+++++++..... .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 55678999999999999976 4689999998854322 2235688899999999 56999999999877665 89
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcc
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLA 654 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla 654 (839)
+||||+++ +|.+++..........+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccc
Confidence 99999985 888887543222245689999999999999999999985 9999999999999998 899999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC---
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG--- 730 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 730 (839)
+.+...... .....+++.|+|||++.+ ..++.++||||||+++|||++|..||.......... -....+...
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 234 (295)
T cd07837 159 RAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL---HIFKLLGTPTEQ 234 (295)
T ss_pred eecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH---HHHHHhCCCChh
Confidence 865332211 112246788999998865 467999999999999999999999996543211000 000000000
Q ss_pred cccc---ccc----cccc----CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TPLK---VAD----RRLE----GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~~~---~~~----~~l~----~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.... ..+ +... ....+.....+.+++.+|++.+|.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 000 0000 0000123455778899999999999999999875
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=5.2e-32 Score=289.46 Aligned_cols=249 Identities=25% Similarity=0.332 Sum_probs=197.9
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.+.+.||+|+||.||+|... +++.|++|++..... ....+.+|++.+.+++|+|++++++.+......++|+||+++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 455678999999999999876 688999999975433 456789999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++... ...+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 100 ~~L~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 100 GSLTDIITQN----FVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 9999999432 1378999999999999999999998 4999999999999999999999999999875543221
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+........ .............
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~------- 237 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-------LFLITTKGIPPLK------- 237 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhcCCCCCc-------
Confidence 12233478899999999988899999999999999999999999863322110 0000000000000
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
........+.+++.+|++.+|.+||++.+|++.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 011123457788999999999999999999863
No 308
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=6.2e-32 Score=286.80 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=195.6
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCC------ce
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGS------NR 574 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~------~~ 574 (839)
..+.+.+.||+|+||.||+|... +++.+++|++.... ....++.+|+.++.++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 34667789999999999999874 57899999986542 3346789999999999 7999999999996644 48
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+++++|.+++.... .....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLR-KKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccc
Confidence 99999999999999884321 1245788999999999999999999985 9999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
........ ......|+..|+|||.+.. ..++.++||||||++++||++|+.||........ ......
T Consensus 161 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~ 232 (275)
T cd06608 161 AQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-------LFKIPR 232 (275)
T ss_pred eecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-------HHHhhc
Confidence 76543222 2233458889999998753 3467899999999999999999999963321110 001111
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
... +.+ .........+.+++.+|+..+|++|||+.+|++
T Consensus 233 ~~~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 NPP-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCC-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 011 111223456788999999999999999999976
No 309
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=8.2e-32 Score=281.65 Aligned_cols=248 Identities=25% Similarity=0.408 Sum_probs=199.7
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+...+.||+|++|.||++... +++.+++|++.........++.+|++.+++++|+|++++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 345678999999999999875 6889999999765444567899999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++... ...+++..+..++.|++.+|+|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 82 ~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 82 GSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 9999998432 25789999999999999999999994 999999999999999999999999999987654332
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
.....++..|+|||.+....++.++||||||++++||++|+.|+......... .......... +..
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~-----~~~- 219 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-------FKIATNGPPG-----LRN- 219 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-------HHHHhcCCCC-----cCc-
Confidence 23445888999999999888999999999999999999999998643211100 0000000000 000
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.......+.+++.+|++.+|++||++.++++
T Consensus 220 -~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 -PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111356788889999999999999999975
No 310
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-32 Score=297.09 Aligned_cols=202 Identities=29% Similarity=0.464 Sum_probs=173.0
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecC------CceEEE
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNRLLV 577 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~lv 577 (839)
.-.+.||+|+||.||+|+. ..|+.||||.+.+... ...+...+|++++++++|+|||++++.-.+. +..++|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 3457899999999999984 6799999999976543 3345688999999999999999999886543 467899
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC--C--CCceeecccCc
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD--E--NFCPKVSDFGL 653 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~--~--~~~~kl~DfGl 653 (839)
||||.+|||...|... .....|++.+.+.++.+++.||.|||+ ++|+||||||.||++- + .-.-||+|||.
T Consensus 96 mEyC~gGsL~~~L~~P--EN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSP--ENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EeecCCCcHHHHhcCc--ccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999654 355789999999999999999999998 5999999999999982 3 33579999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCC
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDA 714 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~ 714 (839)
|+.+.... ......||..|++||+... +.|+..+|.|||||++||.+||..||......
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 99875443 5667789999999999984 88999999999999999999999999766544
No 311
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=5.4e-32 Score=290.41 Aligned_cols=263 Identities=19% Similarity=0.232 Sum_probs=194.1
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecC--CceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~ 578 (839)
.+.+.+.||.|+||.||+|... +++.+|+|.++..... ....+.+|+.++.+++||||+++++++... ...++|+
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 4666789999999999999875 5889999998643222 223567899999999999999999998777 8999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++ +|.+++.. ....+++..+..++.||+.||+|||+. +++|+||||+|||++.++.+||+|||++..+.
T Consensus 86 e~~~~-~L~~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 86 EYVEH-DLKSLMET----MKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred hhcCc-CHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 99974 89888742 223689999999999999999999985 99999999999999999999999999998765
Q ss_pred CCCceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc-c-------hhhhhhhh--
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF-Y-------PGWAFKEM-- 727 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~-~-------~~~~~~~~-- 727 (839)
.... ......++..|+|||.+.+. .++.++|+||||+++|||++|+.||.......... + ....+..+
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 158 SPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred CCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 4321 12233468889999988764 46899999999999999999999996543211000 0 00000000
Q ss_pred ----ccCcccccccccccCCCCHH-HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 728 ----TNGTPLKVADRRLEGAVEEE-ELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 728 ----~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
............+...++.. ....+.+++..|++.+|++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000001111111111111 2455778888999999999999999975
No 312
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=5.2e-32 Score=284.51 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=196.7
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||+|... +|..+|+|.+.... ....+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 456788999999999999774 57899999985431 233456889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-ceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-CPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 660 (839)
++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++ .+||+|||.+......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 82 DGGDLMKRINRQ---RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999988432 234578999999999999999999985 999999999999999875 4699999999876433
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.. ......|++.|+|||++.+..++.++||||||++++||++|+.||...... ....... .+. ..
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~----~~--- 220 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLKIC-QGY----FA--- 220 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHh-ccc----CC---
Confidence 22 223345889999999998888999999999999999999999998633211 1111111 111 00
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.........+.+++.+|++.+|++||++.+|++.
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111223457788899999999999999999763
No 313
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=6.6e-32 Score=287.40 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=184.8
Q ss_pred ccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHh---hccccCCcccccceeecCCceEEEEeecc
Q 038743 510 LLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTI---GSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.||+|+||.||++.. .+++.+|+|.+.+... .....+.+|..++ ...+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999976 4689999999864321 1122344444333 33479999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~-----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 81 GGDLHYHLS-----QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred CCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 999999884 334689999999999999999999995 89999999999999999999999999997653322
Q ss_pred eeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.....|+..|+|||.+.. ..++.++||||||++++||++|+.||.......... . .... ....
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~-~~~~---------~~~~ 215 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----I-DRMT---------LTVN 215 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----H-HHHh---------hcCC
Confidence 122458999999998864 568999999999999999999999996443221100 0 0000 0011
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~~ 776 (839)
...+......+.+++..|++.+|.+|| +++++++.
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 112223345677888899999999999 58888774
No 314
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=7.5e-32 Score=288.83 Aligned_cols=244 Identities=24% Similarity=0.348 Sum_probs=194.1
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChh
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
.+||+|+||.||++.. .+++.||||++..........+.+|+.++..++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 6799999999999977 578999999986544445567899999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEe
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTM 667 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 667 (839)
+++. ...+++.....++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++........ ....
T Consensus 106 ~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~ 175 (292)
T cd06657 106 DIVT------HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKS 175 (292)
T ss_pred HHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccc
Confidence 9873 23578899999999999999999995 999999999999999999999999999876543221 1233
Q ss_pred eccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHH
Q 038743 668 VRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEE 747 (839)
Q Consensus 668 ~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 747 (839)
..|++.|+|||.+.+..++.++||||||+++|||++|+.||........ ....... ..+.+.. ...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-------~~~~~~~-----~~~~~~~--~~~ 241 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-------MKMIRDN-----LPPKLKN--LHK 241 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhh-----CCcccCC--ccc
Confidence 4588999999999888899999999999999999999999864322110 0001000 0000000 011
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 748 ELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 748 ~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+.+++.+||+.+|.+||++.+|++.
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 23346678888999999999999999873
No 315
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=4e-32 Score=289.84 Aligned_cols=261 Identities=25% Similarity=0.301 Sum_probs=192.5
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.||.|++|.||+|.. .+|+.||+|++.... ......+.+|++++++++|||++++++++.++...+++|||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 4567899999999999976 479999999986432 2223568899999999999999999999999999999999995
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
++|.+++... ....+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++..+.....
T Consensus 82 -~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 82 -LDLKKYMDSS---PLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred -cCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 6899988432 224689999999999999999999984 999999999999999999999999999976543221
Q ss_pred eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-cch-------hhhhhhhccC-c-
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-FYP-------GWAFKEMTNG-T- 731 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-~~~-------~~~~~~~~~~-~- 731 (839)
. .....++..|+|||++.+. .++.++||||||+++|||++|+.||....+.... ... ...+...... .
T Consensus 155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 1 1223468899999987664 5789999999999999999999999644321100 000 0000000000 0
Q ss_pred ---ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 732 ---PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 732 ---~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
......... ..........+.+++.+|++.+|.+||+++++++
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000 0001112346778999999999999999999975
No 316
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=9.4e-32 Score=289.87 Aligned_cols=266 Identities=23% Similarity=0.250 Sum_probs=193.3
Q ss_pred HHHhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC-----
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS----- 572 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----- 572 (839)
....+.+.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++.+++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 3455677889999999999999874 58899999986432 222346788999999999999999999987655
Q ss_pred -----ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCcee
Q 038743 573 -----NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647 (839)
Q Consensus 573 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~k 647 (839)
..++|+||+++ +|..++.. ....+++..+..++.||+.||+|||+. +|+|+||||+||++++++.+|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLES----GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 66666632 234689999999999999999999995 999999999999999999999
Q ss_pred ecccCcceecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh----
Q 038743 648 VSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW---- 722 (839)
Q Consensus 648 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~---- 722 (839)
|+|||++...............++..|+|||.+.+ ..++.++||||||++++||++|+.||..............
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 99999998765433222222345778999998765 4578999999999999999999999964332110000000
Q ss_pred ----hhhhhccCcc------cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 723 ----AFKEMTNGTP------LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 723 ----~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.+..+.+... ............ ......+.+++..||+.+|.+||++.+|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000000 000000000000 012345788889999999999999999975
No 317
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=3.5e-32 Score=297.73 Aligned_cols=260 Identities=23% Similarity=0.314 Sum_probs=191.5
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecC-----CceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG-----SNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~l 576 (839)
.+.+.++||+|+||.||+|.. .+++.||||++.... ......+.+|+.++.+++||||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 466778999999999999965 578999999986432 22345678899999999999999999987654 35799
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
|+||+.+ +|..++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 86 v~e~~~~-~l~~~~------~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 86 VQELMET-DLYKLI------KTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred Eehhccc-CHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 9999975 777766 234689999999999999999999995 999999999999999999999999999987
Q ss_pred cCCCCcee--EEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC---
Q 038743 657 MGREHSQV--VTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG--- 730 (839)
Q Consensus 657 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 730 (839)
........ .....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ......+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~---~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL---NLILGVLGTPSQE 232 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCCHH
Confidence 54322211 123457899999998755 56899999999999999999999999643211100 0000000000
Q ss_pred ccccccccc-------c--cCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 731 TPLKVADRR-------L--EGAVE-----EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 731 ~~~~~~~~~-------l--~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+.+.. . ....+ ......+.+++.+||+.+|++||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0 00000 1123457889999999999999999999987
No 318
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=6.6e-32 Score=289.46 Aligned_cols=263 Identities=20% Similarity=0.235 Sum_probs=190.1
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++..++|+||+++.+++..+...++|+||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 355678999999999999975 4688999999865432 22346789999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
. ++|.+++.. ....+.+..+..++.||+.||+|||+. +|+|+||||+|||++.++.+||+|||+++......
T Consensus 86 ~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 86 H-TDLAQYMIQ----HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred c-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 6 677776632 224567888889999999999999985 89999999999999999999999999997643222
Q ss_pred ceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhh---------hhhhc--c
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWA---------FKEMT--N 729 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~---------~~~~~--~ 729 (839)
.. .....++..|+|||++.+. .++.++||||||+++|||++|+.||+...+........|. +..+. .
T Consensus 158 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 158 QT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 11 1223468899999998764 5788999999999999999999999754321100000000 00000 0
Q ss_pred CcccccccccccCCC-----CHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 730 GTPLKVADRRLEGAV-----EEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~-----~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
............... .......+.+++.+|++.+|.+|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000 0011345667889999999999999999864
No 319
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1.4e-31 Score=281.11 Aligned_cols=248 Identities=27% Similarity=0.386 Sum_probs=200.3
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecC--CceEEEEee
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLVYEF 580 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e~ 580 (839)
...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+.+. ...++++||
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 82 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82 (260)
T ss_pred eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence 45678999999999999875 689999999865432 3456789999999999999999999999888 889999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 83 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 83 VSGGSLSSLLKK-----FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred cCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999842 23889999999999999999999994 9999999999999999999999999999876544
Q ss_pred Cce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
... ......++..|+|||.+.....+.++||||||++++||++|+.||....... ..... . ....
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~-~--------~~~~ 220 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-----AALYK-I--------GSSG 220 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHHh-c--------cccC
Confidence 321 1233458889999999998889999999999999999999999997544110 00000 0 0001
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.....+......+.+++.+|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111122233567888899999999999999999975
No 320
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-33 Score=321.13 Aligned_cols=245 Identities=28% Similarity=0.435 Sum_probs=195.3
Q ss_pred ccccccCCCceEEEEE-eCCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 508 AQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
...||.|.||.||-+. .++|+..|+|-+.-.. ....+...+|+.++..|+|||+|+++|+-.+.+..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 3589999999999995 5679999999874322 334456889999999999999999999999999999999999999
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|.+.+ ..++.+++.....+..|++.|++|||++ +||||||||.||||+.+|.+|++|||.|..+.......
T Consensus 1320 sLa~ll-----~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1320 SLASLL-----EHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred cHHHHH-----HhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 999998 3556777777788899999999999997 99999999999999999999999999999775542111
Q ss_pred ---EEeeccccceeCcccccCC---CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh-hhhccCccccccc
Q 038743 665 ---VTMVRGTRGYLAPEWVSNR---PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-KEMTNGTPLKVAD 737 (839)
Q Consensus 665 ---~~~~~gt~~y~aPE~~~~~---~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 737 (839)
.....||+.|||||++.+. ....++||||+|||++||+||++||...+.. |+. -++..|.
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh------ 1458 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGH------ 1458 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccC------
Confidence 2345799999999999763 4567899999999999999999999643321 211 1111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 738 RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 738 ~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.++++......-.+++.+|++.||++|-++.|+++.
T Consensus 1459 ---~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 ---KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ---CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 122333344555678888999999999888777654
No 321
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=6.1e-32 Score=295.92 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=192.9
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC-----CceE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG-----SNRL 575 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~ 575 (839)
.|.+.+.||+|+||+||++.. .+++.||||.+.... ......+.+|+.++..++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 355677999999999999975 568999999986532 23345678899999999999999999988654 3579
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+|+||+. ++|.+++. ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 86 lv~e~~~-~~L~~~~~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 86 IVYELMD-TDLHQIIR-----SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEeCCC-CCHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 9999996 68888873 335688999999999999999999984 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhh--------hhh
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWA--------FKE 726 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~--------~~~ 726 (839)
...... .......++..|+|||.+.. ..++.++||||||+++|||++|+.||............... ...
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 664322 22233457889999998765 56899999999999999999999999643211100000000 000
Q ss_pred hccCcccccc-------cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKVA-------DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.........+ +.... .........+.+++.+|++.+|++||+++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000000 00000 0011234567889999999999999999999877
No 322
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=5.7e-32 Score=296.31 Aligned_cols=264 Identities=23% Similarity=0.296 Sum_probs=193.5
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhcc-ccCCcccccceeecC--CceEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEG--SNRLL 576 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~--~~~~l 576 (839)
..+.+.+.||+|+||.||+|... +++.+|||++.... ......+.+|+.++.++ +||||+++++++... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 45667789999999999999764 68899999985432 23345677899999999 999999999988643 46899
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
||||++ ++|.+++. ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 87 v~e~~~-~~L~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 87 VFEYME-TDLHAVIR------ANILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred Eecccc-cCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 999997 58988873 2277889999999999999999998 4999999999999999999999999999986
Q ss_pred cCCCCc----eeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--------h
Q 038743 657 MGREHS----QVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--------A 723 (839)
Q Consensus 657 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~ 723 (839)
...... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.............. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643322 12233458899999998765 5678999999999999999999999964332111000000 0
Q ss_pred hhhhccCccccccc----ccc--cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 724 FKEMTNGTPLKVAD----RRL--EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 724 ~~~~~~~~~~~~~~----~~l--~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+.......+++ ... ...........+.+++.+|++.+|++||++.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000110 000 000011134567889999999999999999999875
No 323
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=9.7e-32 Score=288.36 Aligned_cols=259 Identities=19% Similarity=0.226 Sum_probs=180.1
Q ss_pred HHHHhhccccccccCCCceEEEEEeCC----CcEEEEEEecccCCcch-----------HHHHHHHHHhhccccCCcccc
Q 038743 500 LQIRTSNFAQLLGTGGFGSVYKGSLGD----GTLVAVKKLDRVLPHGE-----------KEFVTEVNTIGSMHHMNLVRL 564 (839)
Q Consensus 500 l~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l 564 (839)
+....+.+.++||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|+|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 334567788999999999999998754 34566665432211110 112233345566789999999
Q ss_pred cceeecCC----ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 565 CGYCSEGS----NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 565 ~g~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
++++.... ..++++|++.. ++.+.+. .....++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLVE-NTKEIFK-----RIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred EEeeeEecCCceEEEEEEehhcc-CHHHHHH-----hhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 99765543 34667776543 5555542 122356778889999999999999985 99999999999999
Q ss_pred CCCCceeecccCcceecCCCCce------eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCC
Q 038743 641 DENFCPKVSDFGLAKLMGREHSQ------VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDA 714 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~ 714 (839)
+.++.+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||+++||++|+.||......
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 99999999999999876432211 122346999999999999999999999999999999999999999755322
Q ss_pred CCccc-hhh-hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 715 EDFFY-PGW-AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 715 ~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
..... ... ....+.. ..+.... ....+.+++..|++.+|++||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 240 GNLIHAAKCDFIKRLHE--------GKIKIKN---ANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHhHHHHHHHhhh--------hhhccCC---CCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 11100 000 0011111 1111111 1344667777799999999999999998874
No 324
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-34 Score=274.59 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=192.4
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhc-cccCCcccccceeecCCceEEEEeeccCCC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGS-MHHMNLVRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
..||.|+||+|+|-.+ +.|+.+|||+++.... .+.++++.|.+...+ -++||||+++|.+..+...++.||.|. -|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-IS 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hh
Confidence 4799999999999966 5699999999976543 456678889886554 589999999999999999999999995 47
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeE
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV 665 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 665 (839)
|+.+....+......+++..+-+|...++.||.||.+. ..|||||+||+|||||..|.+||||||++..+.... ..
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si--Ak 224 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI--AK 224 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHH--Hh
Confidence 77664332233556788888889999999999999986 689999999999999999999999999997654322 23
Q ss_pred EeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 666 TMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
+.-.|...|||||.+.. ..|+.++||||||+.|+|+.||+.|+..-... ......+..+....+..+ .
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv------feql~~Vv~gdpp~l~~~----~ 294 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV------FEQLCQVVIGDPPILLFD----K 294 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH------HHHHHHHHcCCCCeecCc----c
Confidence 34468889999999864 35899999999999999999999998632210 000111112221111111 1
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
-..+....+.+++..|+..+..+||...++.++
T Consensus 295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 122345667888888999999999999998764
No 325
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.2e-32 Score=286.71 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=196.0
Q ss_pred HHhhccccccccCCCceEEEEEeCCCcEEEEEEeccc--CCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 578 (839)
...|.+.++||+||.+.||++...+.+.+|+|++... ..+....|..|+..|.+| .|.+||+|++|-..+..+||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4456677899999999999999988899999987433 234456799999999999 5999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||- .-+|..+|... .....+| .+..+..|++.++.++|++ +|||.||||.|+|+- .|.+||+|||+|..+.
T Consensus 440 E~G-d~DL~kiL~k~---~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKK---KSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred ecc-cccHHHHHHhc---cCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 985 45899988432 2233445 6777899999999999997 999999999999985 4689999999999887
Q ss_pred CCCceeE-EeeccccceeCcccccCC-----------CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhh
Q 038743 659 REHSQVV-TMVRGTRGYLAPEWVSNR-----------PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKE 726 (839)
Q Consensus 659 ~~~~~~~-~~~~gt~~y~aPE~~~~~-----------~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 726 (839)
.+..... ....||+.||+||.+... ..+.++||||+|||||+|+.|+.||.... ..|+
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~a--- 580 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQIA--- 580 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHHH---
Confidence 7665553 345799999999988532 25689999999999999999999996211 0111
Q ss_pred hccCcccccccccccCCCCH-HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKVADRRLEGAVEE-EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
++..+.++.-.-+++. ..-..+++++..||+.||++||+..+|++.
T Consensus 581 ----Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 581 ----KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ----HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1233444433222211 111228888999999999999999999763
No 326
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1e-31 Score=285.77 Aligned_cols=241 Identities=25% Similarity=0.351 Sum_probs=187.6
Q ss_pred cccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||+||++.. .+|+.||+|.+.... ......+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999965 468999999986432 12234567899999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+++... ....+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||++...... ....
T Consensus 81 ~~~l~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~ 152 (277)
T cd05577 81 KYHIYNV---GEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIK 152 (277)
T ss_pred HHHHHHc---CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Cccc
Confidence 9998533 224688999999999999999999995 9999999999999999999999999999765431 1122
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...++..|+|||.+.+..++.++||||||++++||++|+.||......... ..+.... .. .....+.
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~----~~--~~~~~~~ 219 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-------EELKRRT----LE--MAVEYPD 219 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-------HHHHhcc----cc--ccccCCc
Confidence 345788999999998888999999999999999999999999644321100 0000000 00 0011112
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGE 772 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~ 772 (839)
.....+.+++..||+.+|.+||+..+
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCc
Confidence 22445778889999999999994444
No 327
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=9e-32 Score=287.00 Aligned_cols=261 Identities=24% Similarity=0.336 Sum_probs=196.5
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.||+|++|.||++... +++.+++|++...... ....+..|+.++++++|+||+++++++..+...++|+||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 34578999999999999774 6889999998654322 34578899999999999999999999999999999999997
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+ +|.+++.. ....+++..+..++.||+.||.|||+. +|+|+||||+||+++.++.+||+|||.+.......
T Consensus 82 ~-~l~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 82 T-DLYKLIKD----RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred C-CHHHHHHh----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 5 88887742 235789999999999999999999995 99999999999999999999999999998775543
Q ss_pred eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch--------hhhhhhhcc---C
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP--------GWAFKEMTN---G 730 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~--------~~~~~~~~~---~ 730 (839)
.......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+..... ...+..+.+ .
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhh
Confidence 122234578889999998876 7899999999999999999999998644321110000 000000000 0
Q ss_pred cccccccccc--cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TPLKVADRRL--EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~~~~~~~~l--~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
......+... ...........+.+++..||+.+|.+||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000000 00111234567889999999999999999999975
No 328
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.3e-32 Score=312.43 Aligned_cols=245 Identities=28% Similarity=0.400 Sum_probs=181.3
Q ss_pred ccccccCCCceEEEEEeC-CCcEEEEEEecccC-CcchHHHHHHHHHhhccccCCcccccceeecC--------------
Q 038743 508 AQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG-------------- 571 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-------------- 571 (839)
.++||+||||.|||++.+ ||+.+|||++.-.. ........+|++.+++|+|||||+++....+.
T Consensus 484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~ 563 (1351)
T KOG1035|consen 484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDS 563 (1351)
T ss_pred HHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccch
Confidence 358999999999999653 89999999996543 22334688999999999999999986542110
Q ss_pred --------------------------------------------------------------------------------
Q 038743 572 -------------------------------------------------------------------------------- 571 (839)
Q Consensus 572 -------------------------------------------------------------------------------- 571 (839)
T Consensus 564 ~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d 643 (1351)
T KOG1035|consen 564 ESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILD 643 (1351)
T ss_pred hhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccC
Confidence
Q ss_pred -------------------------CceEEEEeeccCCChhhhcccCCCCCcccC-ChhhHHHHHHHHHHHhHHhhhccC
Q 038743 572 -------------------------SNRLLVYEFMKNGSLDKWIFPSYHHRDRVL-DWTTRFNIAIATAQGIAYFHEQCR 625 (839)
Q Consensus 572 -------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l-~~~~~~~i~~~ia~~L~yLH~~~~ 625 (839)
..+||-||||+.-.|++++.... .. .....++++.+|+.||+|+|++
T Consensus 644 ~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-----~~~~~d~~wrLFreIlEGLaYIH~~-- 716 (1351)
T KOG1035|consen 644 DTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-----FNSQRDEAWRLFREILEGLAYIHDQ-- 716 (1351)
T ss_pred cchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-----cchhhHHHHHHHHHHHHHHHHHHhC--
Confidence 12367788888888877774321 11 3567789999999999999997
Q ss_pred CeeeecCCCCCcEEECCCCceeecccCcceecC-----------------CCCceeEEeeccccceeCcccccCC---CC
Q 038743 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLMG-----------------REHSQVVTMVRGTRGYLAPEWVSNR---PI 685 (839)
Q Consensus 626 ~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~---~~ 685 (839)
+||||||||.||+||++..+||+|||+|+... .......+...||.-|+|||++.+. +|
T Consensus 717 -giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 717 -GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred -ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 89999999999999999999999999998721 0111123456799999999999764 59
Q ss_pred CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCC
Q 038743 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVF 765 (839)
Q Consensus 686 s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~ 765 (839)
+.|+|+||+||||+||+ .||....+.. .+...++.+.+..- ..+..++...-.+++.|++++||.
T Consensus 796 n~KiDmYSLGIVlFEM~---yPF~TsMERa------~iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEML---YPFGTSMERA------SILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred cchhhhHHHHHHHHHHh---ccCCchHHHH------HHHHhcccCCCCCC------cccccccchHHHHHHHHHhcCCCc
Confidence 99999999999999999 4454322210 11122222221110 223345556667899999999999
Q ss_pred CCCCHHHHHH
Q 038743 766 MRPSMGEVVK 775 (839)
Q Consensus 766 ~RPt~~~v~~ 775 (839)
+|||+.|++.
T Consensus 861 kRPtA~eLL~ 870 (1351)
T KOG1035|consen 861 KRPTATELLN 870 (1351)
T ss_pred cCCCHHHHhh
Confidence 9999999965
No 329
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=7.8e-32 Score=294.72 Aligned_cols=265 Identities=20% Similarity=0.297 Sum_probs=194.7
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec----CCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE----GSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~ 575 (839)
..+.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++.+++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 3456678999999999999975 468999999986542 2334567889999999999999999998753 35689
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+. ++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 85 lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 85 VVMDLME-SDLHHIIH-----SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEehhh-hhHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 9999996 68988883 234589999999999999999999984 99999999999999999999999999998
Q ss_pred ecCCCCcee---EEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhh
Q 038743 656 LMGREHSQV---VTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWA 723 (839)
Q Consensus 656 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~ 723 (839)
......... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... +...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 664322211 223468889999998865 4689999999999999999999999965432110000 0000
Q ss_pred hhhhccCcccccccc-cccCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 724 FKEMTNGTPLKVADR-RLEGAVE-----EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 724 ~~~~~~~~~~~~~~~-~l~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.............+. ....... ......+.+++.+|++.+|.+||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000000 0000111 1234668889999999999999999998874
No 330
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.3e-31 Score=292.58 Aligned_cols=267 Identities=22% Similarity=0.264 Sum_probs=199.7
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC-----ceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-----NRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~l 576 (839)
+.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 456789999999999999875 48999999997653 334467899999999999999999999998775 7899
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
+|||++ ++|.+++. ....+++..+..++.+|+.||+|||+. +|+||||||.|||++.++.++|+|||++..
T Consensus 82 v~e~~~-~~l~~~l~-----~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 82 VTELME-TDLHKVIK-----SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred Eecchh-hhHHHHHh-----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999998 48888883 234789999999999999999999995 999999999999999999999999999987
Q ss_pred cCCCCc--eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchh-----h---hhh
Q 038743 657 MGREHS--QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPG-----W---AFK 725 (839)
Q Consensus 657 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~-----~---~~~ 725 (839)
...... .......++..|+|||.+.+. .++.++||||||++++||++|+.||......+...... . .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 654321 112334578899999999887 88999999999999999999999996544211000000 0 000
Q ss_pred hhccCcccccccc-cccCC-----CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--hcCC
Q 038743 726 EMTNGTPLKVADR-RLEGA-----VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM--LEGS 780 (839)
Q Consensus 726 ~~~~~~~~~~~~~-~l~~~-----~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~--L~~~ 780 (839)
..........+.. ..... ........+.+++.+||+.+|.+||++.++++. +++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 0000000000000 00000 011134567889999999999999999999985 4443
No 331
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=283.78 Aligned_cols=197 Identities=30% Similarity=0.430 Sum_probs=173.6
Q ss_pred cccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.-++||+|+||.||-... .+|+.+|.|++.+.. .+++.-.++|-.++.+++.+.||.+--.+...+.++||+..|.
T Consensus 189 ~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMN 268 (591)
T KOG0986|consen 189 VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMN 268 (591)
T ss_pred eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeec
Confidence 346999999999999965 569999999996543 3445557899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
||+|.-+|.+. ....+++...+-++.+|+.||++||.+ .||.|||||+|||||+.|+++|+|.|||..+...
T Consensus 269 GGDLkfHiyn~---g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g-- 340 (591)
T KOG0986|consen 269 GGDLKFHIYNH---GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG-- 340 (591)
T ss_pred CCceeEEeecc---CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCC--
Confidence 99999999643 457899999999999999999999996 9999999999999999999999999999876443
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
+.....+||.+|||||++.++.|+...|.||+||+||||+.|+.||...
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 2334447999999999999999999999999999999999999999643
No 332
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=3.8e-31 Score=286.87 Aligned_cols=262 Identities=18% Similarity=0.156 Sum_probs=190.0
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEeccc--CCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCC
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRV--LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
.+.+|.|+++.|+++.. +++.||||++... .....+.+..|++++++++|+||+++++++.+....+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455556666666655 7899999998654 23345679999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc---
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS--- 662 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~--- 662 (839)
|.+++... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 86 l~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTH---FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99998532 234578888999999999999999995 999999999999999999999999999875532111
Q ss_pred ---eeEEeeccccceeCcccccC--CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc------cchhhhhh-hh--c
Q 038743 663 ---QVVTMVRGTRGYLAPEWVSN--RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF------FYPGWAFK-EM--T 728 (839)
Q Consensus 663 ---~~~~~~~gt~~y~aPE~~~~--~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~------~~~~~~~~-~~--~ 728 (839)
.......++..|+|||++.. ..++.++||||||+++|||++|+.||......... ..+.+... .. .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 11223457788999999876 45889999999999999999999999754321100 00000000 00 0
Q ss_pred cCcccc----ccccc----ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 729 NGTPLK----VADRR----LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 729 ~~~~~~----~~~~~----l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...... ..++. ............+.+++.+||+.+|++||+++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 00000 0111122334567889999999999999999999764
No 333
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=263.16 Aligned_cols=248 Identities=23% Similarity=0.367 Sum_probs=190.7
Q ss_pred cccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeeccC
Q 038743 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+...||.|..|.|++.++ ..|..+|||.+.+.. ....+++++.++++..-+ +|+||+.+|||.......+.||.|.-
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 345799999999999977 458999999997654 334466778888777664 99999999999999999999998843
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
.++.+|.. -..++.+..+=++...+++||.||.+. .+|||||+||+|||+|+.|++||||||++..+-+. .
T Consensus 176 -C~ekLlkr----ik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--k 246 (391)
T KOG0983|consen 176 -CAEKLLKR----IKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--K 246 (391)
T ss_pred -HHHHHHHH----hcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecc--c
Confidence 45555532 234577888888999999999999985 69999999999999999999999999999876443 3
Q ss_pred eEEeeccccceeCcccccC---CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVSN---RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~---~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
..+...|.+.|||||.+.- ..|+.++||||||+.|+||.||+.||......-. +...+.+..+ +.+
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe------~ltkvln~eP-----P~L 315 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE------VLTKVLNEEP-----PLL 315 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH------HHHHHHhcCC-----CCC
Confidence 3455679999999999864 4688999999999999999999999976543210 1111111111 222
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
... ......+.++...|++.|+.+||...++++.
T Consensus 316 ~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 316 PGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred Ccc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 211 1134557778888999999999999998764
No 334
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.8e-31 Score=294.17 Aligned_cols=261 Identities=22% Similarity=0.255 Sum_probs=192.9
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------Cc
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SN 573 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 573 (839)
..+...+.||+|+||.||++.. .+++.||||.+.... .....++.+|+.++.+++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 4566778999999999999975 478999999986432 22345678899999999999999999987543 35
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
.++||||+. ++|.+.+. ..++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~-~~l~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQ-------MDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred EEEEEeccC-CCHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 799999996 47877762 1278888999999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc---------cchhh--
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF---------FYPGW-- 722 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~---------~~~~~-- 722 (839)
++....... .....++..|+|||.+.+..++.++||||||+++|||++|+.||......... ....+
T Consensus 165 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 165 ARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred ceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 987643221 22335788999999999999999999999999999999999999644311000 00000
Q ss_pred ----hhhhhccCc-------ccccccccc----cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 723 ----AFKEMTNGT-------PLKVADRRL----EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 723 ----~~~~~~~~~-------~~~~~~~~l----~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
......... ..++....+ ...........+.+++.+|++.+|++||++.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000111100 001111335567899999999999999999999865
No 335
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=2e-31 Score=284.57 Aligned_cols=263 Identities=22% Similarity=0.343 Sum_probs=194.7
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.+.||.|++|.||+|+.. +|+.||||.+...... ....+.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 456789999999999999874 6889999998654322 34567889999999999999999999999999999999998
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+ +|.+++... .....+++..+..++.||+.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 82 ~-~l~~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 82 K-DLKKYMDTH--GVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred c-cHHHHHHhc--CCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 5 888887432 1234689999999999999999999985 899999999999999999999999999976533221
Q ss_pred eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch--------hhhhhhhccCcc-
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP--------GWAFKEMTNGTP- 732 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~- 732 (839)
......++..|++||.+.+. .++.++||||||+++|||++|+.||......+..... ...++.+.....
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 11223468899999988664 5789999999999999999999999754322110000 000000000000
Q ss_pred c----ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 L----KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 ~----~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
. ...+... ....+.....+.+++.+|++.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0000000 0011122456778899999999999999999975
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.1e-31 Score=287.20 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=196.9
Q ss_pred hccccccccCCCceEEEEEe----CCCcEEEEEEecccC----CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVL----PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 575 (839)
+.+.+.||+|+||.||++.. .+++.||||.+.+.. ....+.+..|+.++.++ +||||+++++.+......+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 45678899999999999964 357899999986432 12235688999999999 6999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+||||+++|+|.+++. ....+++..+..++.|+++||.|||+ .+++||||||+||+++.++.++|+|||+++
T Consensus 82 lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 82 LILDYVNGGELFTHLY-----QREHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEecCCCCcHHHHHh-----hcCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999999999999884 23468889999999999999999998 499999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccCCC--CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSNRP--ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
.+............|+..|+|||.+.+.. .+.++||||||+++|||++|..||....... ...... +....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~-~~~~~---- 226 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEIS-RRILK---- 226 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHH-HHHHc----
Confidence 76443332233345889999999987654 7889999999999999999999985322110 000110 00000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
... ..+......+.+++.+|++.+|++|||+.+|.+.|+-
T Consensus 227 --~~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 --SKP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --cCC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 001 1111223456788889999999999999999888764
No 337
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=1.4e-31 Score=285.53 Aligned_cols=258 Identities=20% Similarity=0.245 Sum_probs=190.1
Q ss_pred ccccccccCCCceEEEEEe-CCCcEEEEEEecccCC-cchHHHHHHHHHhhccc-cCCcccccceeecC--CceEEEEee
Q 038743 506 NFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEG--SNRLLVYEF 580 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~e~ 580 (839)
.+.+.||+|+||.||+|.. .+++.||+|+++.... .......+|+.++.++. |+||+++++++.+. +..++|+||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 4567899999999999976 4689999999865422 22334567888898885 99999999999887 889999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
++ |+|.+++.. ....+++..+..++.||+.||+|||+. +++||||||+||+++. +.+||+|||+++.....
T Consensus 82 ~~-~~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 82 MD-MNLYELIKG----RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred CC-ccHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 97 578777732 234689999999999999999999995 9999999999999999 99999999999866432
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc---------cchhhhhhhhccC
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF---------FYPGWAFKEMTNG 730 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~---------~~~~~~~~~~~~~ 730 (839)
.. .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+.. ....+ .......
T Consensus 153 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 229 (282)
T cd07831 153 PP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEV-LKKFRKS 229 (282)
T ss_pred CC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHH-HHhhccc
Confidence 22 122347889999997654 56789999999999999999999999654321100 00000 0011100
Q ss_pred cccccccccccC----CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 TPLKVADRRLEG----AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 ~~~~~~~~~l~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.......+.... .........+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000 001123567889999999999999999999976
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=9.3e-32 Score=289.02 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=191.0
Q ss_pred HhhccccccccCCCceEEEEEeCC-CcEEEEEEecccC-CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEe
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL-PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e 579 (839)
..+.+.+.||+|+||.||+|...+ ++.||||.++... .....++..|+.++.+.. ||||+++++++.+....+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 345678899999999999998864 8999999996543 223456777887777764 9999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|++ ++|.+++.. ....+++..+..++.||+.||+|||+. .+|+||||+|+||++++++.+||+|||++..+..
T Consensus 95 ~~~-~~l~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMS-TCLDKLLKR----IQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccC-cCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 985 467666532 234788999999999999999999973 4899999999999999999999999999976543
Q ss_pred CCceeEEeeccccceeCcccccCCC----CCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRP----ITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... ........+...
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~-- 237 (296)
T cd06618 168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF------EVLTKILQEEPP-- 237 (296)
T ss_pred CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH------HHHHHHhcCCCC--
Confidence 222 12234788999999987653 7899999999999999999999986422110 000111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.+.. .......+.+++.+|++.+|++||++.++++.-
T Consensus 238 ---~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 238 ---SLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ---CCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0000 001234578888999999999999999998653
No 339
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.6e-31 Score=289.22 Aligned_cols=261 Identities=19% Similarity=0.231 Sum_probs=189.6
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCC--------
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS-------- 572 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-------- 572 (839)
.+.+.+.||+|+||.||++.. .+++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 92 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG 92 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence 466778999999999999976 4689999999854322 22335678999999999999999999986654
Q ss_pred ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
..++||||+.+ +|.+++.. ....+++.++..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||
T Consensus 93 ~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 93 SFYLVFEFCEH-DLAGLLSN----KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred eEEEEEcCCCc-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 35999999975 78777732 234689999999999999999999995 99999999999999999999999999
Q ss_pred cceecCCCCce---eEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhc
Q 038743 653 LAKLMGREHSQ---VVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMT 728 (839)
Q Consensus 653 la~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 728 (839)
++..+...... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||....................
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99866432221 12234578889999988664 478999999999999999999999865432111000000000000
Q ss_pred -----cC-------------cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 729 -----NG-------------TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 729 -----~~-------------~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. .........+... .....+.+++.+|++.+|.+||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00 0000000011000 11235678999999999999999999975
No 340
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.2e-31 Score=282.54 Aligned_cols=244 Identities=22% Similarity=0.217 Sum_probs=187.9
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCCc---chHHHHHHHHHh-hccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTI-GSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
+.||+|+||.||+|.. .+++.||||.+.+.... ....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999976 46899999998653211 122344555443 445899999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIK-----TLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 99999984 234688899999999999999999995 999999999999999999999999999876432
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
.....++..|+|||.+.+..++.++||||||+++|||++|..||....... .......+... ....
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~------~~~~ 215 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-------VFDNILSRRIN------WPEE 215 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhcccC------CCCc
Confidence 123357889999999988889999999999999999999999996432211 11111111100 0011
Q ss_pred CCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 744 VEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 744 ~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
........+.+++.+|++.+|++||++.++.+.|.
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 11123456788999999999999998877766654
No 341
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=1.6e-31 Score=280.54 Aligned_cols=249 Identities=25% Similarity=0.365 Sum_probs=200.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||++.. .+++.+|+|.+.... .....++..|++++++++|+||+++.+++.+....++|+||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 45678899999999999965 468899999986532 233456788999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++.... .....+++..++.++.|++.||+|||+. +++|+||+|.||++++++.+||+|||+++.....
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 82 PFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred CCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999985421 1235688999999999999999999984 9999999999999999999999999999876543
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||......+ + ......+ ..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~----~~~~~~~---------~~ 218 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---L----RYKVQRG---------KY 218 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H----HHHHhcC---------CC
Confidence 1222457889999999999999999999999999999999999996432110 0 0011111 11
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+......+.+++.+|++.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 12223445668899999999999999999999763
No 342
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.5e-31 Score=290.02 Aligned_cols=262 Identities=22% Similarity=0.265 Sum_probs=191.0
Q ss_pred cccccC--CCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 509 QLLGTG--GFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G--~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
..||+| +||+||++.. .+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..+...++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356766 8999999976 5799999999864322 2235688999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+|++||+.+.........
T Consensus 84 ~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 84 GSANSLLKTY---FPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CCHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 9999988532 22358888999999999999999998 49999999999999999999999999865433211111
Q ss_pred e------EEeeccccceeCcccccCC--CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-------cchhhhh----
Q 038743 664 V------VTMVRGTRGYLAPEWVSNR--PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-------FYPGWAF---- 724 (839)
Q Consensus 664 ~------~~~~~gt~~y~aPE~~~~~--~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-------~~~~~~~---- 724 (839)
. .....++..|+|||++.+. .++.++||||||+++|||++|+.||......... .+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccc
Confidence 0 0112345679999998763 5789999999999999999999999654321100 0000000
Q ss_pred ---hhh----------------ccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 725 ---KEM----------------TNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 725 ---~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
... .......+.+..+...........+.+++.+||+.+|++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 0000001111122222233456778999999999999999999999754
No 343
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.4e-31 Score=289.46 Aligned_cols=265 Identities=20% Similarity=0.249 Sum_probs=191.8
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecC--CceEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLLV 577 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lv 577 (839)
..+.+.+.||+|+||.||+|.. .+|+.||+|.++..... ....+.+|+.++.+++|+||+++++++.+. +..++|
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 3466778999999999999976 46899999998643221 223567899999999999999999998654 568999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|||+.+ +|.+++.. ....+++.++..++.||++||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 87 ~e~~~~-~l~~~l~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 87 MEYCEQ-DLASLLDN----MPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EecCCC-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 999974 78888742 235689999999999999999999995 8999999999999999999999999999876
Q ss_pred CCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch--------hhhhhhhc
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP--------GWAFKEMT 728 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~--------~~~~~~~~ 728 (839)
..... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+..... ...+..+.
T Consensus 159 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 159 GLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 54321 1222335788999998865 56799999999999999999999999644322110000 00000000
Q ss_pred cCcccccc--cccccCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 729 NGTPLKVA--DRRLEGAV---EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 729 ~~~~~~~~--~~~l~~~~---~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
........ ........ .......+.+++.+|++.+|++||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 00000000 00123456778899999999999999999864
No 344
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=2.8e-31 Score=280.35 Aligned_cols=247 Identities=23% Similarity=0.281 Sum_probs=191.0
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEeccc-----CCcchHHHHHHHHHhhccccCCcccccceeecC--CceEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRV-----LPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG--SNRLL 576 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~l 576 (839)
+.+.+.||+|+||.||+|.. .+++.||+|.+... .......+.+|++++++++|+||+++++++.+. ...++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 56678999999999999976 46899999987432 122335688999999999999999999998664 45789
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
++||+++++|.+++. ....+++.....++.||+.||.|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 84 v~e~~~~~~L~~~~~-----~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 84 FVEYMPGGSIKDQLK-----AYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEeCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 999999999999883 223578888999999999999999985 999999999999999999999999999986
Q ss_pred cCCCCc--eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccc
Q 038743 657 MGREHS--QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLK 734 (839)
Q Consensus 657 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (839)
...... .......++..|+|||++.+..++.++||||||++++||++|+.||........ ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~-------- 221 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA------IFKI-------- 221 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH------HHHH--------
Confidence 532111 112234588999999999988899999999999999999999999863321110 0000
Q ss_pred cccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 735 VADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 735 ~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.........+......+.+++..|++ +|..||+..+++.
T Consensus 222 -~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 222 -ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00001112233344557778888999 5799999998765
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.3e-31 Score=287.61 Aligned_cols=264 Identities=23% Similarity=0.273 Sum_probs=190.1
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
.+.+.+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+....++||||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence 3566789999999999999764 688999999854322 2335688999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~~ 659 (839)
++ ++|.+++... ....+++.....++.||+.||+|||+. +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 83 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 83 LD-LDLKKHMDSS---PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred cc-ccHHHHHHhC---CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 96 5787776322 223457788889999999999999984 9999999999999985 56799999999976543
Q ss_pred CCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcc------
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTP------ 732 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 732 (839)
... ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+.............+...
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 156 PVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred Ccc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 211 1122346889999998866 45789999999999999999999999654321110000000000000000
Q ss_pred ccc--ccccccC----CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 LKV--ADRRLEG----AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 ~~~--~~~~l~~----~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
... ..+.... .........+.+++.+|++.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0000000 001122345778999999999999999999986
No 346
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=3.1e-31 Score=278.43 Aligned_cols=251 Identities=24% Similarity=0.388 Sum_probs=201.4
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|+||.||++... +++.||+|++..... ....++.+|+++++.++|||++++++.+......++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 456678999999999999774 588999999865432 44567889999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++.... .....+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 82 DGGDLSQKIKKQK-KEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred CCCcHHHHHHHhh-ccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999985431 1246789999999999999999999995 99999999999999999999999999998765443
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.......|++.|+|||.+....++.++||||||+++++|++|+.||....... ..........
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 220 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-------LALKILKGQY--------- 220 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-------HHHHHhcCCC---------
Confidence 22233468889999999998899999999999999999999999986432110 1111111111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...+......+.+++.+|++.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111233457788889999999999999999763
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=4.2e-31 Score=281.92 Aligned_cols=262 Identities=23% Similarity=0.323 Sum_probs=193.6
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccCC-cchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.||+|+||+||+|... +++.||||++..... .......+|+..+.+++ |+||+++++++.+....++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 46688999999999999875 478999999865432 22334567899999998 999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|.+++... ....+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 EGNLYQLMKDR---KGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 88998888432 234789999999999999999999984 999999999999999999999999999986643221
Q ss_pred eeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc----------chhhhhhhhccCc
Q 038743 663 QVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF----------YPGWAFKEMTNGT 731 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~----------~~~~~~~~~~~~~ 731 (839)
.....++..|+|||.+.. ..++.++||||||++++||++|+.||.......... -..|.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 123457889999998754 567999999999999999999999986443211100 0001000000000
Q ss_pred cccccccccc---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLE---GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~---~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+..... ..........+.+++.+|++.+|++||+++|++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000000000 00001124568899999999999999999999753
No 348
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=8.1e-31 Score=280.25 Aligned_cols=259 Identities=24% Similarity=0.301 Sum_probs=190.5
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc--chHHHHHHHHHhhcc---ccCCcccccceeecCCc-----e
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSM---HHMNLVRLCGYCSEGSN-----R 574 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~-----~ 574 (839)
.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|+.++.++ +|+||+++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 45678999999999999875 4899999999643222 123566777776655 69999999999988776 8
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
+++|||+.+ +|.+++... ....+++..+..++.||++||+|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 82 ~l~~e~~~~-~l~~~l~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 82 TLVFEHVDQ-DLATYLSKC---PKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred EEEehhccc-CHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 999999974 888887432 223689999999999999999999995 8999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhh-------hhh
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAF-------KEM 727 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~-------~~~ 727 (839)
..+..... .....++..|+|||.+.+..++.++||||||+++|||++|+.||......+.. ..... ..+
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 230 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQL--DKIFDVIGLPSEEEW 230 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHH--HHHHHHcCCCChHhc
Confidence 87643321 12234788899999999999999999999999999999999998654322110 00000 000
Q ss_pred ccCcc--ccccccccc---CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 728 TNGTP--LKVADRRLE---GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 728 ~~~~~--~~~~~~~l~---~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..... ......... ..........+.+++.+||+.+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000 000000000 0111223456778999999999999999999974
No 349
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=3.2e-31 Score=284.01 Aligned_cols=250 Identities=22% Similarity=0.282 Sum_probs=192.0
Q ss_pred hccccccccCCCceEEEEEe----CCCcEEEEEEecccCC----cchHHHHHHHHHhhcc-ccCCcccccceeecCCceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL----GDGTLVAVKKLDRVLP----HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 575 (839)
+.+.+.||+|+||.||++.. .+|+.||+|++..... ...+++.+|++++.++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 45678999999999999975 4689999999864321 2235678899999999 6999999999999999999
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+|+||+++++|.+++. ....+.+..+..++.||+.||.|||+. +++||||+|+|||+++++.+||+|||+++
T Consensus 82 lv~e~~~~~~L~~~l~-----~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 82 LILDYINGGELFTHLS-----QRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEecCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 9999999999999984 234678888999999999999999984 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccCC--CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSNR--PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
..............|+..|+|||.+... .++.++||||||+++|||++|+.||........ ..... ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~-~~~~~~--- 227 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEIS-RRILKS--- 227 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHH-HHhhcc---
Confidence 7644333333345588999999998753 468899999999999999999999864322111 00111 000000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVK 775 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~ 775 (839)
.+ ..+......+.+++..|++.+|++|| ++.+++.
T Consensus 228 ---~~----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 ---EP----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---CC----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 00 11122334567888899999999997 5555543
No 350
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.9e-31 Score=278.10 Aligned_cols=246 Identities=25% Similarity=0.386 Sum_probs=198.0
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
+.+.+.||+|++|.||++... +++.|++|.+..... .....+.+|++++.+++|+|++++++++.+....+++|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 456789999999999999764 678999999976543 34467899999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~-----~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 82 ENGSLRQIIK-----KFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCcHHHHHH-----hccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999883 235789999999999999999999984 99999999999999999999999999998765433
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
.. .....++..|+|||.+.+..++.++||||||++++||++|+.|+........ .+ .. .... .
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~----~~--~~-~~~~-----~---- 216 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA----LF--RI-VQDD-----H---- 216 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH----HH--HH-hccC-----C----
Confidence 21 2334578899999999888899999999999999999999999864321100 00 00 0000 0
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
...+......+..++.+|++.+|++||++.+++.
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1111222456778889999999999999999974
No 351
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=4.6e-31 Score=280.79 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=184.3
Q ss_pred ccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHH---HhhccccCCcccccceeecCCceEEEEeecc
Q 038743 510 LLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVN---TIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.||+|+||.||++.. .+++.||+|.+.+... .....+..|.. .+....||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999976 4588999999865321 11223444443 3444579999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|..++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 g~~L~~~l~-----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~ 152 (278)
T cd05606 81 GGDLHYHLS-----QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (278)
T ss_pred CCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence 999998883 334689999999999999999999995 899999999999999999999999999976533221
Q ss_pred eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLE 741 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 741 (839)
....|+..|+|||.+.++ .++.++||||||+++|||++|+.||.......... ...... .....+
T Consensus 153 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~------~~~~~~- 218 (278)
T cd05606 153 ---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TMAVEL- 218 (278)
T ss_pred ---cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhh------ccCCCC-
Confidence 234589999999998754 68999999999999999999999996543211100 000000 001111
Q ss_pred CCCCHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 038743 742 GAVEEEELMRAMKVAFWCIQDEVFMRP-----SMGEVVK 775 (839)
Q Consensus 742 ~~~~~~~~~~~~~l~~~Cl~~~p~~RP-----t~~~v~~ 775 (839)
+......+.+++.+|++.+|.+|| ++.++++
T Consensus 219 ---~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 ---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 112235677888899999999999 8889875
No 352
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=5.3e-31 Score=284.73 Aligned_cols=249 Identities=24% Similarity=0.296 Sum_probs=192.1
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
..+...+.||+|+||.||+|.. .+++.+|+|.+.... .....++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3455567899999999999976 467899999985421 222346788999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+. |+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 95 e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 578776632 234578999999999999999999985 99999999999999999999999999998654
Q ss_pred CCCceeEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (839)
.. ....++..|+|||.+. ...++.++||||||+++|||++|+.|+....... .......+..
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~--- 231 (308)
T cd06634 167 PA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNES--- 231 (308)
T ss_pred Cc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-------HHHHHhhcCC---
Confidence 32 2235788999999875 3567889999999999999999999985322110 0000100000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
+.. ........+.+++.+||+.+|++||++.+|++....
T Consensus 232 --~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 232 --PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred --CCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 000 111233456788899999999999999999887543
No 353
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.4e-31 Score=288.30 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=197.4
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
.+.+.+.||+|.|++|.+|+. .++..||||.+++..-. ....+.+|+++|..++|||||+++.+...+..+++||||
T Consensus 57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ey 136 (596)
T KOG0586|consen 57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEY 136 (596)
T ss_pred ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEe
Confidence 456678999999999999976 46899999999765322 234588999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
..+|.+.++|.+. ..........+..|+..+++|||+. .|+|||||++||||+.++.+||+|||++..+..
T Consensus 137 a~~ge~~~yl~~~-----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~- 207 (596)
T KOG0586|consen 137 ASGGELFDYLVKH-----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY- 207 (596)
T ss_pred ccCchhHHHHHhc-----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc-
Confidence 9999999999532 2334477788999999999999995 999999999999999999999999999998752
Q ss_pred CceeEEeeccccceeCcccccCCCC-CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
........|++.|.|||++.+..+ ..++|+||+|++||-|++|..||++..-.+ +.+. ++...
T Consensus 208 -~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-----------Lr~r----vl~gk 271 (596)
T KOG0586|consen 208 -GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-----------LRPR----VLRGK 271 (596)
T ss_pred -cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-----------ccch----heeee
Confidence 333456779999999999999776 589999999999999999999998654221 1111 11111
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
++- +.-....+-+++.+.+-.+|.+|++++++.+.-
T Consensus 272 ~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 272 YRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred ecc--cceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 111 111122345667778899999999999998763
No 354
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=274.12 Aligned_cols=255 Identities=21% Similarity=0.252 Sum_probs=199.1
Q ss_pred ccccccccCCCceEEEEEe------CCCcEEEEEEecccCC-cchHHHHHHHHHhhccccCCcccccceeec-CCceEEE
Q 038743 506 NFAQLLGTGGFGSVYKGSL------GDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-GSNRLLV 577 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv 577 (839)
.+..++-+|.||.||+|.+ .+.+.|-+|.++.... -....+..|...+..+.|||+.++.+++.+ ....+.+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 3455899999999999944 4456788888865432 234568889999999999999999999865 5678899
Q ss_pred EeeccCCChhhhcccC---CCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 578 YEFMKNGSLDKWIFPS---YHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
|.++.-|+|+.||... .....+.+...+...++.|++.||+|||.+ ++||.||.++|++||+..++||+|=.++
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLS 443 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALS 443 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhc
Confidence 9999999999999622 123446788889999999999999999996 9999999999999999999999999999
Q ss_pred eecCCCCce-eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 655 KLMGREHSQ-VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 655 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
+.+-+.+.+ ....-..+..||+||.+.+..|+.++|||||||+||||+| |+.|+...+..+ ....+++|.
T Consensus 444 RDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m~~ylkdGy- 515 (563)
T KOG1024|consen 444 RDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------MEHYLKDGY- 515 (563)
T ss_pred cccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------HHHHHhccc-
Confidence 865443322 2333446788999999999999999999999999999995 888876433222 111222221
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
++. -+.+++.++..++.-||...|++||++++++.-|.+
T Consensus 516 ------Rla--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 516 ------RLA--QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred ------eec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 121 233455667788888999999999999999998864
No 355
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=263.74 Aligned_cols=264 Identities=23% Similarity=0.345 Sum_probs=198.8
Q ss_pred chHHHHHHhhccccccccCCCceEEEE-EeCCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 496 TYRDLQIRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 496 ~~~~l~~~~~~~~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
+++|+..-| .+.||+|+|+.|--+ .+.+|..+|||++.+..........+|++++.+. .|+||++|+.+++++..
T Consensus 74 ~F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 74 KFEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred hHHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 355554444 357999999999988 4678999999999888777788899999999998 59999999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC---ceeecc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF---CPKVSD 650 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~---~~kl~D 650 (839)
.|||||-|.||+|..+| ++.+.+++.+..++..+||.||.|||. ++|.||||||+|||-..-. -+||+|
T Consensus 151 FYLVfEKm~GGplLshI-----~~~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHI-----QKRKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred EEEEEecccCchHHHHH-----HHhhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeec
Confidence 99999999999999998 356789999999999999999999999 5999999999999985433 489999
Q ss_pred cCcceecCC--C----CceeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc
Q 038743 651 FGLAKLMGR--E----HSQVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY 719 (839)
Q Consensus 651 fGla~~~~~--~----~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~ 719 (839)
|.|..-... + ........+|+..|||||+.. ...|+.+.|.||||||||-|++|..||.+.....-
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--- 299 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--- 299 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC---
Confidence 998864321 1 112234567999999999773 24689999999999999999999999977654321
Q ss_pred hhhhhhhhccCcccc-ccccccc--CCCCHHH----HHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 720 PGWAFKEMTNGTPLK-VADRRLE--GAVEEEE----LMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 720 ~~~~~~~~~~~~~~~-~~~~~l~--~~~~~~~----~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.|...+.-. ...+ ++...-. -+++.++ .....+++...+..++.+|.++.+|+.
T Consensus 300 -GWdrGe~Cr-~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 -GWDRGEVCR-VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred -CccCCCccH-HHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 121110000 0000 1111001 1223222 223344555567799999999999887
No 356
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.3e-31 Score=290.05 Aligned_cols=258 Identities=22% Similarity=0.277 Sum_probs=191.5
Q ss_pred cccccccCCCceEEEEEe-CCCcEEEEEEecccCCcc--------------hHHHHHHHHHhhccccCCcccccceeecC
Q 038743 507 FAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHG--------------EKEFVTEVNTIGSMHHMNLVRLCGYCSEG 571 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 571 (839)
+.+.||.|+||.||+|.. .+++.||||.+....... ...+.+|++++.+++|+||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 456899999999999975 468999999986432211 12477899999999999999999999999
Q ss_pred CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
...++||||+. |+|.+++. ....+++.....++.|++.||+|||+. +++|+||+|+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~-----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVD-----RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred CcEEEEEeccc-cCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCc
Confidence 99999999997 68988883 334688899999999999999999984 9999999999999999999999999
Q ss_pred CcceecCCCC-------------ceeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc
Q 038743 652 GLAKLMGREH-------------SQVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF 717 (839)
Q Consensus 652 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~ 717 (839)
|+++...... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||....+.+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9998764111 1111223467889999998764 4789999999999999999999999754422110
Q ss_pred cchhhhhhhhccCc---cc------------ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 718 FYPGWAFKEMTNGT---PL------------KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 718 ~~~~~~~~~~~~~~---~~------------~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
......+.... .. ....+... .........+.+++..|++.+|++||++.+++..-
T Consensus 244 ---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 244 ---GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred ---HHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 00000000000 00 00000000 00111245577899999999999999999998753
No 357
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=3.8e-31 Score=281.67 Aligned_cols=246 Identities=24% Similarity=0.365 Sum_probs=197.6
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e 579 (839)
|.+.+.||+|+||.||++... +++.||+|++.... ....+.+..|+.++.+++ ||||+++++++......++|||
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE 82 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence 566789999999999999764 68999999986532 223456889999999998 9999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|+++++|.+++. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~l~-----~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 83 YAPNGELLQYIR-----KYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred CCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 999999999984 234799999999999999999999985 999999999999999999999999999987644
Q ss_pred CCc-------------------eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch
Q 038743 660 EHS-------------------QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720 (839)
Q Consensus 660 ~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~ 720 (839)
... .......++..|+|||.+....++.++||||||++++|+++|+.||.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----- 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----- 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-----
Confidence 321 11233457889999999988889999999999999999999999997443111
Q ss_pred hhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCH----HHHHH
Q 038743 721 GWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSM----GEVVK 775 (839)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~----~~v~~ 775 (839)
..+.... .....+......+.+++.+|++.+|.+||++ +++++
T Consensus 230 --~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 --TFQKILK----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --HHHHHHh----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0011100 0111222224567889999999999999999 66653
No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4.4e-31 Score=289.60 Aligned_cols=263 Identities=23% Similarity=0.283 Sum_probs=189.2
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------CceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~ 575 (839)
+.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++.+++||||+++++++... ...+
T Consensus 17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 96 (342)
T cd07879 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFY 96 (342)
T ss_pred eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEE
Confidence 44567999999999999975 568999999986532 22234688999999999999999999998654 3468
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+|+||+.. +|..++ ...+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++
T Consensus 97 lv~e~~~~-~l~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 97 LVMPYMQT-DLQKIM-------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred EEeccccc-CHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 99999864 666554 23578899999999999999999995 89999999999999999999999999997
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--------hhhh
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--------AFKE 726 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~~~~ 726 (839)
...... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............. ..+.
T Consensus 166 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 166 HADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 643221 22346788999999876 4689999999999999999999999975331110000000 0000
Q ss_pred hccCccccccc--ccc-cCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--hcCCCC
Q 038743 727 MTNGTPLKVAD--RRL-EGAV---EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM--LEGSAD 782 (839)
Q Consensus 727 ~~~~~~~~~~~--~~l-~~~~---~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~--L~~~~~ 782 (839)
+.......... +.. .... .......+.+++.+|++.+|.+||++.+++.. ++...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000000000 000 0000 00123457789999999999999999999954 655544
No 359
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.7e-30 Score=274.60 Aligned_cols=239 Identities=21% Similarity=0.292 Sum_probs=181.8
Q ss_pred ccccc--cccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeec
Q 038743 506 NFAQL--LGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 506 ~~~~~--lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+.+. ||+|+||.||++.. .+++.+|+|.+...... +. |+.....+ +||||+++++.+...+..++||||+
T Consensus 17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~ 91 (267)
T PHA03390 17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI 91 (267)
T ss_pred ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC
Confidence 34444 59999999999975 46888999998643211 11 22222222 7999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-ceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-CPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 660 (839)
++++|.+++. ....+++.++..++.||++||.|||+. +++||||||+||+++.++ .++|+|||+++.....
T Consensus 92 ~~~~L~~~l~-----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 92 KDGDLFDLLK-----KEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred CCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 9999999984 223789999999999999999999995 899999999999999988 9999999999865432
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
. ...++..|+|||++.+..++.++||||||++++||++|+.||...... ......+.... . ...
T Consensus 164 ~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~--------~~~ 227 (267)
T PHA03390 164 S-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ--Q--------KKL 227 (267)
T ss_pred c-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh--c--------ccC
Confidence 2 235788999999999989999999999999999999999999733221 11111111000 0 000
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCC-HHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPS-MGEVVK 775 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt-~~~v~~ 775 (839)
.........+.+++..|++.+|.+||+ ++++++
T Consensus 228 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 --PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 111123445778888999999999995 688864
No 360
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=1.5e-30 Score=281.90 Aligned_cols=241 Identities=25% Similarity=0.328 Sum_probs=187.2
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.||+|+||+||+|+. .+++.||+|++..... .....+.+|+++++.++|||++++++++.+....++||||+.
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 104 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL- 104 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence 46799999999999976 4688999999864322 223467889999999999999999999999999999999996
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++.. ....+++.++..++.||+.||.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 105 ~~l~~~l~~----~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 105 GSASDLLEV----HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 577776632 234688999999999999999999985 999999999999999999999999999864322
Q ss_pred eEEeeccccceeCccccc---CCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 664 VVTMVRGTRGYLAPEWVS---NRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~---~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
.....|+..|+|||++. ...++.++||||||+++|||++|+.|+........ ...... ......
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~-~~~~~~----- 240 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQ-NDSPTL----- 240 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHh-cCCCCC-----
Confidence 12345788999999984 45688999999999999999999999864322110 000000 000000
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
........+.+++.+|++.+|.+||++.+++..
T Consensus 241 ---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 ---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122346778889999999999999999864
No 361
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=261.86 Aligned_cols=200 Identities=26% Similarity=0.355 Sum_probs=174.1
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcch---HHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGE---KEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
..+|.++||+|.||.|.+.+- ..++.+|+|++++...... ..-+.|-++|+..+||.+..|--.+...+.+++|||
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMe 248 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVME 248 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEE
Confidence 346788999999999999965 4689999999987643333 345678899999999999999988999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|..||.|.-+| .+.+.+++....-+...|+.||.|||+. +||.||||.+|.|||.+|++||+||||++.--
T Consensus 249 yanGGeLf~HL-----srer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I- 319 (516)
T KOG0690|consen 249 YANGGELFFHL-----SRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI- 319 (516)
T ss_pred EccCceEeeeh-----hhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc-
Confidence 99999999888 4567888877777889999999999995 99999999999999999999999999998532
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
.....+...+||+.|+|||++....|..+.|.|.+|||+|||++|+.||....
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 22334567889999999999999999999999999999999999999996443
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.5e-30 Score=277.44 Aligned_cols=260 Identities=26% Similarity=0.326 Sum_probs=194.5
Q ss_pred ccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 506 NFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.+.+.||+|+||.||+|+.. +++.||+|.+.... ......+..|+.++++++|+||+++++++.+....++|+||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 34578999999999999775 58999999997653 2234568899999999999999999999999999999999998
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
++|.+++... ...+++..+..++.+++.||+|||+. +|+||||+|+||++++++.+||+|||+++.......
T Consensus 82 -~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 82 -MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred -cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 5899998432 24689999999999999999999995 899999999999999999999999999987643322
Q ss_pred eeEEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc--------chhhhhhhhccC---
Q 038743 663 QVVTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF--------YPGWAFKEMTNG--- 730 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~--------~~~~~~~~~~~~--- 730 (839)
......++..|+|||.+.+. .++.++||||||++++||++|+.||......+... .....+..+..-
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 12223356789999998776 88999999999999999999999986543211000 000000000000
Q ss_pred --cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 731 --TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 731 --~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
........... ...+.....+.+++..|++.+|++||++.+|+.
T Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 233 KPTFPKFPPKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccCccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000000 000112456889999999999999999999975
No 363
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.1e-30 Score=282.90 Aligned_cols=264 Identities=23% Similarity=0.293 Sum_probs=189.9
Q ss_pred HhhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCc--chHHHHHHHHHhhccccCCcccccceeecCC-------
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH--GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS------- 572 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------- 572 (839)
..+.+.+.||+|+||.||+|... +++.+|||++...... ....+.+|++++.+++||||+++++++.+..
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 45667889999999999999764 6899999998543222 2345788999999999999999999875433
Q ss_pred -ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeeccc
Q 038743 573 -NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDF 651 (839)
Q Consensus 573 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df 651 (839)
..++|+||+.+ +|...+.. ....+++..+..++.||++||+|||+. +|+|+||||+||++++++.+||+||
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~----~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLEN----PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999875 66666632 234689999999999999999999995 9999999999999999999999999
Q ss_pred CcceecCCCCce----------eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc-
Q 038743 652 GLAKLMGREHSQ----------VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY- 719 (839)
Q Consensus 652 Gla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~- 719 (839)
|+++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999865432211 1123456888999998765 4588999999999999999999999865432110000
Q ss_pred -------hhhhhhhh---ccC---cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 720 -------PGWAFKEM---TNG---TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 720 -------~~~~~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
....+..+ ... .......+.+... .......+.+++.+|++.+|.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEER-FGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHH-cccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000000 000 0000000000000 0112256788999999999999999999875
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=5e-31 Score=289.17 Aligned_cols=263 Identities=21% Similarity=0.246 Sum_probs=190.0
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecC-----------
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG----------- 571 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~----------- 571 (839)
.+.+.+.||.|+||.||+|.. .+++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL 85 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence 456678999999999999976 56899999998665555567789999999999999999999876543
Q ss_pred ---CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC-CCCcee
Q 038743 572 ---SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD-ENFCPK 647 (839)
Q Consensus 572 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~-~~~~~k 647 (839)
...++||||++ ++|.+++. ...+++.....++.||+.||.|||+. +|+||||||+||+++ +++.+|
T Consensus 86 ~~~~~~~lv~e~~~-~~L~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 86 TELNSVYIVQEYME-TDLANVLE------QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccceEEEEeeccc-ccHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 35789999997 58888773 23588899999999999999999985 999999999999997 556789
Q ss_pred ecccCcceecCCCCcee--EEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--
Q 038743 648 VSDFGLAKLMGREHSQV--VTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW-- 722 (839)
Q Consensus 648 l~DfGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~-- 722 (839)
|+|||+++......... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||..............
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 235 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV 235 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 99999998654322111 122357889999997654 5688999999999999999999999964432111000000
Q ss_pred h------hhhhccCcccccccccccCCCC-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 723 A------FKEMTNGTPLKVADRRLEGAVE-----EEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 723 ~------~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
. .....................+ ......+.+++..|++.+|.+||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 0000000000000000000000 1123457789999999999999999999853
No 365
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.3e-31 Score=264.15 Aligned_cols=205 Identities=23% Similarity=0.306 Sum_probs=170.5
Q ss_pred hhccccccccCCCceEEEEEeC---C--CcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeec-CCceE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG---D--GTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-GSNRL 575 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~ 575 (839)
.|+....||+|.||.||+|.-. + ...+|||+++.... .-.....+|+.+++.++||||+.|..++.. +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 3566788999999999999442 2 23799999965422 123457899999999999999999998877 78899
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC----Cceeeccc
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN----FCPKVSDF 651 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~----~~~kl~Df 651 (839)
|++||.+. +|...|+-..+...+.++...+..|+.||+.|+.|||+ +.|+||||||.|||+..+ |.+||+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999877 78787765545566789999999999999999999999 699999999999999766 99999999
Q ss_pred CcceecCCCCcee--EEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 652 GLAKLMGREHSQV--VTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 652 Gla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
|+++++...-... ...++-|..|.|||++.+ ..||.+.|||+.|||+.||++-.+.|....
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 9999986644333 345667999999999887 579999999999999999999988886543
No 366
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.4e-30 Score=274.35 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=192.2
Q ss_pred hccccccccCCCceEEEEEeCC-CcEEEEEEecccC-----CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL-----PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
|.+.+.||+|+||.||++.... +..+++|.++... .....++..|+.++.+++||||+++++++.+....++|+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 5677899999999999997643 4556666654321 223345778999999999999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++++|.+++... ......+++..+..++.|++.||.|||+. +++|+||||+||++++ +.+||+|||+++...
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 82 EYCEGRDLDCKLEEL-KHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EeCCCCCHHHHHHHH-hhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999888532 12345789999999999999999999984 9999999999999975 569999999998764
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
.... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... ...+.
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~------~~~~~-~~~~~------- 221 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL------SVVLR-IVEGP------- 221 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHH-HHcCC-------
Confidence 3221 223345788999999998888999999999999999999999998532211 00111 11110
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
....+......+.+++.+|++.+|++||++.++++
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 --TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11122334456788999999999999999999976
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=9e-31 Score=286.11 Aligned_cols=262 Identities=21% Similarity=0.267 Sum_probs=188.3
Q ss_pred hccccccccCCCceEEEEEeC-C--CcEEEEEEecccCC--cchHHHHHHHHHhhcc-ccCCcccccceeec----CCce
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-D--GTLVAVKKLDRVLP--HGEKEFVTEVNTIGSM-HHMNLVRLCGYCSE----GSNR 574 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~ 574 (839)
+.+.+.||+|+||.||++... . +..||+|++..... ...+.+.+|+.++.++ +||||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 456789999999999999764 3 77999999864322 2245688899999999 59999999987543 2456
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++++||+. ++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~e~~~-~~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 82 YLYEELME-ADLHQIIR-----SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEeccc-CCHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 78888886 68988883 345688999999999999999999985 9999999999999999999999999999
Q ss_pred eecCCCCce---eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc--------chhh
Q 038743 655 KLMGREHSQ---VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF--------YPGW 722 (839)
Q Consensus 655 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~--------~~~~ 722 (839)
+.+...... ......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 865432211 1223468999999998765 568999999999999999999999986543211000 0000
Q ss_pred hhhhhccCccccccc-------ccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 723 AFKEMTNGTPLKVAD-------RRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....+.......... ..+. .........+.+++.+|++.+|.+||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000000 0000 0001123467789999999999999999998643
No 368
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=269.72 Aligned_cols=245 Identities=23% Similarity=0.317 Sum_probs=192.0
Q ss_pred HHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc---chHHHHHHHHHhhcc-ccCCcccccceeecCCc
Q 038743 499 DLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSN 573 (839)
Q Consensus 499 ~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 573 (839)
.+.....+|..+||+|+||.|.++.- .+.+.+|||++++.... +.+--+.|-++|+.. +-|.++++..++..-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 45666778999999999999999955 45789999999765422 222345677788776 67899999999999999
Q ss_pred eEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 574 RLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 574 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
+|+||||+.+|+|--+| ++-..+.+....-+|..||-||-+||+. +||.||||..|||||.+|.+||+|||+
T Consensus 425 LyFVMEyvnGGDLMyhi-----QQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHI-----QQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred eeeEEEEecCchhhhHH-----HHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccc
Confidence 99999999999997777 3445677888888999999999999995 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
++.-- ..........||+.|+|||++..++|...+|.|||||+||||+.|+.||++.++.+.+ +.
T Consensus 497 cKEni-~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF-------~a------- 561 (683)
T KOG0696|consen 497 CKENI-FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF-------QA------- 561 (683)
T ss_pred ccccc-cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------HH-------
Confidence 98421 1223355678999999999999999999999999999999999999999977654322 11
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCC
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPS 769 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt 769 (839)
+.+... .++.....+.+.+...-+...|.+|..
T Consensus 562 -I~ehnv--syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 562 -IMEHNV--SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -HHHccC--cCcccccHHHHHHHHHHhhcCCccccC
Confidence 122211 122223334445555567788888753
No 369
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.7e-30 Score=270.22 Aligned_cols=236 Identities=27% Similarity=0.319 Sum_probs=190.1
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEecccCCc---chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 511 LGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
||+|+||.||++... +++.+|+|.+...... ....+..|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 799999999999774 5899999998654322 345788999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEE
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVT 666 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 666 (839)
.+++. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~-----~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 151 (250)
T cd05123 81 FSHLS-----KEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTN 151 (250)
T ss_pred HHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-Cccc
Confidence 99984 234689999999999999999999994 99999999999999999999999999998764332 1223
Q ss_pred eeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 667 MVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 667 ~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
...++..|+|||.+.+...+.++|+||||+++||+++|+.||....... ....... .. ...+.
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~--------~~--~~~~~ 214 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-------IYEKILK--------DP--LRFPE 214 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHhc--------CC--CCCCC
Confidence 4457889999999988889999999999999999999999996432210 0011110 00 11112
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHH
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGE 772 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~ 772 (839)
.....+.+++.+|++.+|++||++.+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 22456778899999999999999954
No 370
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=276.22 Aligned_cols=237 Identities=28% Similarity=0.441 Sum_probs=189.2
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
.++||.|.||+||-|++ ++|+.||||++.+.. ...+.++++|+.+|++++||.||.+.-.|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 35899999999999976 579999999997643 44567799999999999999999999999999999999999855
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC---CceeecccCcceecCCCC
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN---FCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~---~~~kl~DfGla~~~~~~~ 661 (839)
++.+.|.. .....|++..-.-++.||+.||+|||.. +|+|+||||+||||... -++||||||+|++++...
T Consensus 648 DMLEMILS---sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 648 DMLEMILS---SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hHHHHHHH---hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 55555533 2456788888888999999999999994 99999999999999643 379999999999986543
Q ss_pred ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCC------ccchhhhhhhhccCccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAED------FFYPGWAFKEMTNGTPLKV 735 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 735 (839)
- ...++||+.|+|||+++.+.|...-|+||.|||+|--++|..||+...+..+ +.+|.-.|
T Consensus 722 F--RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW----------- 788 (888)
T KOG4236|consen 722 F--RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPW----------- 788 (888)
T ss_pred h--hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCch-----------
Confidence 2 3456799999999999999999999999999999999999999975443221 11222111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 038743 736 ADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVV 774 (839)
Q Consensus 736 ~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~ 774 (839)
.+.....++++...+|..-.+|-+...-+
T Consensus 789 ----------~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 789 ----------SEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ----------hhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 12233456667777887888887766544
No 371
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.4e-30 Score=285.75 Aligned_cols=258 Identities=24% Similarity=0.278 Sum_probs=189.0
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCC------ce
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGS------NR 574 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~~ 574 (839)
.|.+.+.||+|+||.||++.. .+++.||||++.... ......+.+|+.++.+++||||+++++++.... ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 355678999999999999965 578999999985432 222346889999999999999999999886543 45
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
++||||+ +++|.+++. ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 96 ~lv~e~~-~~~l~~~~~------~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 96 YLVMPFM-GTDLGKLMK------HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred EEEEecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 8999998 779988873 34688999999999999999999985 9999999999999999999999999999
Q ss_pred eecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc--------cchhhhhh
Q 038743 655 KLMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF--------FYPGWAFK 725 (839)
Q Consensus 655 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~--------~~~~~~~~ 725 (839)
....... ....+++.|+|||.+.+ ..++.++||||||++++++++|+.||......... ..+.....
T Consensus 166 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 166 RQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred cccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 8653321 22357889999998876 46889999999999999999999999744321100 00000000
Q ss_pred hhccCccccccc--cccc----CCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 726 EMTNGTPLKVAD--RRLE----GAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 726 ~~~~~~~~~~~~--~~l~----~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.+.......... +... ..........+.+++.+|++.+|++|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000000 0000 0001112335778999999999999999999983
No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=5.9e-30 Score=278.77 Aligned_cols=258 Identities=24% Similarity=0.305 Sum_probs=189.9
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeec-CCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE-GSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~ 580 (839)
|.+.+.||+|+||.||++.. .+++.||||++.... ....+.+..|+.++.+++||||+++.+++.. ....++++||
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence 55678999999999999965 478999999885432 2234568899999999999999999998865 5678999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+ +++|.+++. ...+++.....++.||++||+|||+. +|+||||+|+|||+++++.+||+|||++......
T Consensus 92 ~-~~~L~~~~~------~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 92 L-GTDLHRLLT------SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred h-ccCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 8 568988873 33577888889999999999999995 9999999999999999999999999999754322
Q ss_pred CceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc--------chhhhhhhhccCc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF--------YPGWAFKEMTNGT 731 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~--------~~~~~~~~~~~~~ 731 (839)
. ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .+.-....+..+.
T Consensus 162 ~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd07856 162 M----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN 237 (328)
T ss_pred c----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence 1 22346788999998766 578999999999999999999999996433110000 0000001111111
Q ss_pred ccccccc-cccCCCCH-----HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADR-RLEGAVEE-----EELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~-~l~~~~~~-----~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..++... ......+. .....+.+++.+|++.+|++||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111000 00011111 123567888999999999999999999765
No 373
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=267.45 Aligned_cols=255 Identities=26% Similarity=0.364 Sum_probs=192.7
Q ss_pred HHhhccccccccCCCceEEEE-EeCCCcEEEEEEecccC--Ccch-----HHHHHHHHHhhccccCCcccccceee-cCC
Q 038743 502 IRTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL--PHGE-----KEFVTEVNTIGSMHHMNLVRLCGYCS-EGS 572 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~--~~~~-----~~~~~E~~~l~~l~h~niv~l~g~~~-~~~ 572 (839)
...|-+..+||+|+|+.||++ .+...+.||||+-.-.. .... +...+|.++-+.|.||.||++++++. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 344445678999999999999 56778899999863221 1111 34678999999999999999999985 566
Q ss_pred ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC---CCCceeec
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVS 649 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~---~~~~~kl~ 649 (839)
..+-|+|||+|.+|+.||. ..+.+++.+...|+.||+.||.||.+. +++|||-||||.||||- .-|.+||.
T Consensus 542 sFCTVLEYceGNDLDFYLK-----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK-----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cceeeeeecCCCchhHHHH-----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 7889999999999999993 557889999999999999999999985 57999999999999994 45789999
Q ss_pred ccCcceecCCCCce------eEEeeccccceeCcccccC----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc
Q 038743 650 DFGLAKLMGREHSQ------VVTMVRGTRGYLAPEWVSN----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY 719 (839)
Q Consensus 650 DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~ 719 (839)
||||++++..+... ......||..|++||.+.- ..++.|+||||.|||+|..+.|+.||.......+
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--- 692 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--- 692 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH---
Confidence 99999999765443 2456789999999998753 3578999999999999999999999975432211
Q ss_pred hhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 038743 720 PGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEV 773 (839)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v 773 (839)
.+.+..+...-. +.....+........++.+||+..-++|-...++
T Consensus 693 ------ILqeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 693 ------ILQENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred ------HHhhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 111111111100 1111112223345567888999999998765544
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.8e-30 Score=285.06 Aligned_cols=258 Identities=23% Similarity=0.264 Sum_probs=187.3
Q ss_pred hccccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------CceE
Q 038743 505 SNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNRL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~ 575 (839)
+.+.+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+.++.+++||||+++++++... ...+
T Consensus 19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 98 (345)
T cd07877 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 98 (345)
T ss_pred eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEE
Confidence 44567899999999999965 578999999986532 22245678899999999999999999987543 3467
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
++++++ +++|.+++. ...+++..+..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 99 lv~~~~-~~~L~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 99 LVTHLM-GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred EEehhc-ccCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecccccc
Confidence 777776 789988772 23588999999999999999999995 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhhhhh
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWAFKE 726 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~~~~ 726 (839)
..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... +......
T Consensus 169 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 169 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred ccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 64322 223457889999998876 5688999999999999999999999854332110000 0000000
Q ss_pred hccCccccc---ccccccCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKV---ADRRLEGAV---EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~---~~~~l~~~~---~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+........ +........ .......+.+++.+|++.+|.+||++.+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000 000000000 00123457789999999999999999998865
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=1.6e-30 Score=285.28 Aligned_cols=258 Identities=23% Similarity=0.270 Sum_probs=190.4
Q ss_pred hccccccccCCCceEEEEEeC-CCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCc------eE
Q 038743 505 SNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSN------RL 575 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------~~ 575 (839)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++...+. .+
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY 96 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence 556789999999999999774 58899999986432 2233567789999999999999999998866554 89
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
+|+||+ +++|.+++. ...+++..+..++.||++||.|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 97 lv~e~~-~~~L~~~~~------~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 97 LVTHLM-GADLNNIVK------CQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred EEEecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccc
Confidence 999998 669988883 24689999999999999999999995 99999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccc--------hhhhhhh
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFY--------PGWAFKE 726 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~~~~~ 726 (839)
..... .....++..|+|||.+.+ ..++.++||||||+++||+++|+.||........... +.-....
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 65432 223357888999998865 4678999999999999999999999964332110000 0000000
Q ss_pred hccCcccccccc---cccCCC---CHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 727 MTNGTPLKVADR---RLEGAV---EEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 727 ~~~~~~~~~~~~---~l~~~~---~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
+........+.. ...... .......+.+++.+|++.+|.+|||+.+|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000 000000 01124568899999999999999999999763
No 376
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=281.55 Aligned_cols=238 Identities=23% Similarity=0.263 Sum_probs=189.4
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.+.+...+|.|+|+.|-++.. .+++..+||++.+. ..+-.+|+.++... +||||+++.+.+.++.+.++|||.+
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 456677899999999999965 57899999999765 22344566665555 7999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE-CCCCceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL-DENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill-~~~~~~kl~DfGla~~~~~~ 660 (839)
.++-|.+.++. .+.+. .++..|+.+|+.++.|||++ +++||||||+|||+ ++.++++|+|||.++...++
T Consensus 399 ~g~ell~ri~~-----~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 399 DGGELLRRIRS-----KPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred cccHHHHHHHh-----cchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99988777732 22233 77788999999999999996 99999999999999 69999999999999977654
Q ss_pred CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccc
Q 038743 661 HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRL 740 (839)
Q Consensus 661 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 740 (839)
....+-|..|.|||++....++.++|+||||++||||++|+.||....... .....+ .
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~------ei~~~i------------~ 527 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI------EIHTRI------------Q 527 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH------HHHHhh------------c
Confidence 223356889999999999999999999999999999999999997543320 011111 1
Q ss_pred cCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 741 EGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 741 ~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.+.++........+++.+|||.+|.+||+|.++...
T Consensus 528 ~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 528 MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred CCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 222223444556778888999999999999998653
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.8e-31 Score=253.36 Aligned_cols=283 Identities=20% Similarity=0.300 Sum_probs=200.2
Q ss_pred cccccccCCCceEEEEEeC-CCcEEEEEEec--ccCCcchHHHHHHHHHhhccccCCcccccceeec--------CCceE
Q 038743 507 FAQLLGTGGFGSVYKGSLG-DGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSE--------GSNRL 575 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--------~~~~~ 575 (839)
-..+||+|.||+||+|+.. +|+.||+|+.- +....-.....+|+++|..++|+|++.++..|.. ....+
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 3468999999999999764 57888998752 2111222457899999999999999999999853 23579
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
|||.+|+. +|.-+|. .....++..++.+++.++..||.|+|. +.|+|||+||.|+||+.++.+||+|||+++
T Consensus 101 lVf~~ceh-DLaGlLs----n~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLS----NRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeHHHhhh-hHHHHhc----CccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 99999976 7777772 344678899999999999999999998 499999999999999999999999999998
Q ss_pred ecCCCCce---eEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh--------h
Q 038743 656 LMGREHSQ---VVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW--------A 723 (839)
Q Consensus 656 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~ 723 (839)
.+...... ..+..+-|..|.+||.+.+ +.++.+.|||.-|||+.||++|.+-+.+........++.. +
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 76433222 1344556999999998876 5799999999999999999999988876543321111110 1
Q ss_pred hhhhccCcc-------------cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCCCCCCc-
Q 038743 724 FKEMTNGTP-------------LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADINTPPMP- 789 (839)
Q Consensus 724 ~~~~~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~~p~~p- 789 (839)
|....+-.+ ...+..++..-...+ ..++++...+..||.+|+.+.+++...- +-..|.|
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~---~a~dLle~ll~~DP~kR~~ad~alnh~~----F~kdp~pq 325 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDD---EALDLLEKLLKLDPTKRIDADQALNHDF----FWKDPMPQ 325 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCCh---hHHHHHHHHhccCcccCcchHhhhchhh----hhcCCcch
Confidence 111000000 011111111111112 3455666689999999999999976432 2334555
Q ss_pred hhhHHHhhhchhhHH
Q 038743 790 QTVLELIEEGLDHVY 804 (839)
Q Consensus 790 ~~~~~~~~~~~~~~~ 804 (839)
.++.++++...++..
T Consensus 326 anl~~ml~t~~~s~f 340 (376)
T KOG0669|consen 326 ANLQDMLSTHLQSMF 340 (376)
T ss_pred hhHHHHHHHhHHHHH
Confidence 556666666655544
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-30 Score=253.10 Aligned_cols=243 Identities=23% Similarity=0.218 Sum_probs=188.1
Q ss_pred cccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeec----CCceEEEEeecc
Q 038743 509 QLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSE----GSNRLLVYEFMK 582 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~~lv~e~~~ 582 (839)
++||-|-.|.|..... .+++.+|+|++... ...++|+++--.. .|||||.+++++.+ ...+++|||.|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 5899999999999965 57899999998543 2456777765444 69999999998754 567889999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC---CCCceeecccCcceecCC
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD---ENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~---~~~~~kl~DfGla~~~~~ 659 (839)
||.|...+.+ .....+.+.+.-.|+.||+.|+.|||+. .|.||||||+|+|.. .+..+||+|||+|+.-..
T Consensus 143 GGeLfsriq~---~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~ 216 (400)
T KOG0604|consen 143 GGELFSRIQD---RGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE 216 (400)
T ss_pred chHHHHHHHH---cccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccCC
Confidence 9999998843 3556799999999999999999999996 999999999999995 456799999999986433
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
........-|+.|.|||++....|+...|+||+||++|-|++|.+||-...... ++.-....+..+.
T Consensus 217 --~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---ispgMk~rI~~gq-------- 283 (400)
T KOG0604|consen 217 --PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKRRIRTGQ-------- 283 (400)
T ss_pred --CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---CChhHHhHhhccC--------
Confidence 233445667999999999999999999999999999999999999996443211 1111111111111
Q ss_pred ccCCCCH----HHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 740 LEGAVEE----EELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 740 l~~~~~~----~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
-.++. ...+...+++...|..+|.+|.|+.+++..=
T Consensus 284 --y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 284 --YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred --ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 11221 2344555677778899999999999998753
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=9.6e-30 Score=263.91 Aligned_cols=221 Identities=20% Similarity=0.131 Sum_probs=174.4
Q ss_pred CCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChhhhccc
Q 038743 514 GGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFP 592 (839)
Q Consensus 514 G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~ 592 (839)
|.||.||++.. .+++.+|+|++.... .+..|...+....||||+++++++.+....++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999966 568899999986532 334455555566799999999999999999999999999999998842
Q ss_pred CCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEeecccc
Q 038743 593 SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672 (839)
Q Consensus 593 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~ 672 (839)
...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++...... .....++.
T Consensus 79 -----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~ 146 (237)
T cd05576 79 -----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVEN 146 (237)
T ss_pred -----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCc
Confidence 23588999999999999999999984 9999999999999999999999999988655432 12234567
Q ss_pred ceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHH
Q 038743 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRA 752 (839)
Q Consensus 673 ~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 752 (839)
.|+|||.+....++.++||||+|+++|||++|+.|+........ . .... ..+......+
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~------------~-----~~~~----~~~~~~~~~~ 205 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN------------T-----HTTL----NIPEWVSEEA 205 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc------------c-----cccc----CCcccCCHHH
Confidence 89999999888899999999999999999999988753211100 0 0000 0111223456
Q ss_pred HHHHHhccccCCCCCCCHHH
Q 038743 753 MKVAFWCIQDEVFMRPSMGE 772 (839)
Q Consensus 753 ~~l~~~Cl~~~p~~RPt~~~ 772 (839)
.+++.+|++.+|++||++.+
T Consensus 206 ~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHccCCHHHhcCCCc
Confidence 78889999999999999743
No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=293.86 Aligned_cols=200 Identities=22% Similarity=0.275 Sum_probs=176.7
Q ss_pred HHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEE
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv 577 (839)
...+.+.++||+|+||.|..+++ .+++.+|.|++.+.. .....-|..|-.+|..-+.+-|+++.-.|.+..++|||
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 44566788999999999999987 468899999998742 33445689999999999999999999999999999999
Q ss_pred EeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 578 YEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 578 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
||||+||+|-.+|.. .+ .+++....-++..|+.||.-||+. |+|||||||.|||||..|++||+|||.+-.+
T Consensus 154 MdY~pGGDlltLlSk----~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSK----FD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EecccCchHHHHHhh----cC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 999999999999932 22 678777778888999999999996 9999999999999999999999999999988
Q ss_pred CCCCceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCC
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLD 709 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~ 709 (839)
..+..-.....+|||.|++||++.. +.|...+|.||+||++|||+.|..||.
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 8777777777889999999999852 578999999999999999999999995
No 381
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=1.2e-29 Score=299.59 Aligned_cols=144 Identities=25% Similarity=0.367 Sum_probs=126.9
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCC---cchHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLP---HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.|.+.++||+|+||.||+|... +++.||||++..... .....+..|+.++..++||||+++++++......+||||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE 84 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME 84 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence 4567789999999999999775 689999999864322 123568899999999999999999999999999999999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
|+++++|.+++. ....+++...+.++.||+.||+|||.. +|+||||||+||||+.++.+||+|||+++
T Consensus 85 y~~g~~L~~li~-----~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLH-----IYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999984 234578888999999999999999985 99999999999999999999999999986
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2e-29 Score=280.03 Aligned_cols=252 Identities=26% Similarity=0.367 Sum_probs=203.6
Q ss_pred HhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeec-----CCceE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSE-----GSNRL 575 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-----~~~~~ 575 (839)
.+..|.++||.|.+|.||+++. ++++..|+|++... ....++...|.++++.+ +|||++.++|++.. ++.++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 3456788999999999999965 57899999998654 45566788899999888 79999999999853 57899
Q ss_pred EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 576 LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 576 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
||||||.+||..+++.... +..+.|..+..|+..++.||.+||. +.+||||||-.|||++.++.+||.|||++.
T Consensus 98 LVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred EEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeee
Confidence 9999999999999986653 7889999999999999999999998 599999999999999999999999999998
Q ss_pred ecCCCCceeEEeeccccceeCcccccC-----CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccC
Q 038743 656 LMGREHSQVVTMVRGTRGYLAPEWVSN-----RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNG 730 (839)
Q Consensus 656 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 730 (839)
.+...... .....||+.|||||++.. ..|+..+|+||||++..||--|.+|+.......... .+..
T Consensus 172 QldsT~gr-RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF-------~IpR- 242 (953)
T KOG0587|consen 172 QLDSTVGR-RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF-------LIPR- 242 (953)
T ss_pred eeeccccc-ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc-------cCCC-
Confidence 76543333 234569999999999965 347889999999999999999999986443321110 0000
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 731 TPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 731 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.|...-..+......+.+++..|+..+-.+||++.++++.
T Consensus 243 ------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 243 ------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1111112245667788899999999999999999888653
No 383
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.9e-29 Score=258.80 Aligned_cols=238 Identities=27% Similarity=0.361 Sum_probs=190.8
Q ss_pred CCceEEEEEeC-CCcEEEEEEecccCCcc-hHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChhhhccc
Q 038743 515 GFGSVYKGSLG-DGTLVAVKKLDRVLPHG-EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFP 592 (839)
Q Consensus 515 ~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~ 592 (839)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999875 48999999997654444 67899999999999999999999999999999999999999999999843
Q ss_pred CCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEeecccc
Q 038743 593 SYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTR 672 (839)
Q Consensus 593 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~ 672 (839)
. ..+++..++.++.+++++|.|||+. +++|+||+|+||++++++.++|+|||.+....... ......++.
T Consensus 81 ~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~ 150 (244)
T smart00220 81 R-----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTP 150 (244)
T ss_pred c-----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCc
Confidence 2 2388999999999999999999995 99999999999999999999999999998765432 223345788
Q ss_pred ceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHH
Q 038743 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRA 752 (839)
Q Consensus 673 ~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 752 (839)
.|++||.+....++.++|||+||++++||++|..||....... ...+......... ..........+
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~ 217 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL------ELFKKIGKPKPPF-------PPPEWKISPEA 217 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH------HHHHHHhccCCCC-------ccccccCCHHH
Confidence 9999999998889999999999999999999999986422111 0011111110000 00000033568
Q ss_pred HHHHHhccccCCCCCCCHHHHHH
Q 038743 753 MKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 753 ~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 88999999999999999999986
No 384
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=258.35 Aligned_cols=270 Identities=20% Similarity=0.269 Sum_probs=204.6
Q ss_pred ccchHHHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccc-c-C----Ccccccc
Q 038743 494 NFTYRDLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-H-M----NLVRLCG 566 (839)
Q Consensus 494 ~~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~g 566 (839)
-+...|.....+.+...+|+|.||.|-+.-. ..+..||||+++.... -.+..+-|+++++++. + | .+|++.+
T Consensus 80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred EEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 4566777778888899999999999999944 4589999999976532 2345678999999993 2 2 3788888
Q ss_pred eeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC-----
Q 038743 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD----- 641 (839)
Q Consensus 567 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~----- 641 (839)
++.-..+.++|+|.+ |-|+.+||.+. .-..+....+..|+.|++++++|||+ ++++|-||||+|||+-
T Consensus 159 wFdyrghiCivfell-G~S~~dFlk~N---~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 159 WFDYRGHICIVFELL-GLSTFDFLKEN---NYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred hhhccCceEEEEecc-ChhHHHHhccC---CccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceE
Confidence 899999999999987 55899999532 45678889999999999999999999 5999999999999992
Q ss_pred ---------------CCCceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCC
Q 038743 642 ---------------ENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRR 706 (839)
Q Consensus 642 ---------------~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~ 706 (839)
++..+||+|||.|+.-.... ..++.|..|.|||++.+..++.++||||+||||.|+.+|..
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~ 307 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGET 307 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccce
Confidence 13458999999998644333 45567999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCc--------cchhhhhhhh------ccCcc-----------ccccccc----ccCCCCHHHHHHHHHHHH
Q 038743 707 NLDMSGDAEDF--------FYPGWAFKEM------TNGTP-----------LKVADRR----LEGAVEEEELMRAMKVAF 757 (839)
Q Consensus 707 p~~~~~~~~~~--------~~~~~~~~~~------~~~~~-----------~~~~~~~----l~~~~~~~~~~~~~~l~~ 757 (839)
.|....+.+.. .+|....... ..+++ ..+.++. ........+...+.+++.
T Consensus 308 LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~ 387 (415)
T KOG0671|consen 308 LFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLR 387 (415)
T ss_pred ecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHH
Confidence 99776644321 1222111111 01100 0000000 011223466778999999
Q ss_pred hccccCCCCCCCHHHHHH
Q 038743 758 WCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 758 ~Cl~~~p~~RPt~~~v~~ 775 (839)
.++..||.+|+|+.|.+.
T Consensus 388 ~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 388 RMLEFDPARRITLREALS 405 (415)
T ss_pred HHHccCccccccHHHHhc
Confidence 999999999999999875
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.7e-28 Score=275.09 Aligned_cols=261 Identities=19% Similarity=0.186 Sum_probs=175.7
Q ss_pred HHhhccccccccCCCceEEEEEe-----------------CCCcEEEEEEecccCCcchH--------------HHHHHH
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSL-----------------GDGTLVAVKKLDRVLPHGEK--------------EFVTEV 550 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~l~~~~~~~~~--------------~~~~E~ 550 (839)
...+.+.++||+|+||+||+|.. .+++.||||++........+ .+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 33456778999999999999954 23568999998643222222 234567
Q ss_pred HHhhccccCCc-----ccccceeec--------CCceEEEEeeccCCChhhhcccCCC-------------------CCc
Q 038743 551 NTIGSMHHMNL-----VRLCGYCSE--------GSNRLLVYEFMKNGSLDKWIFPSYH-------------------HRD 598 (839)
Q Consensus 551 ~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~-------------------~~~ 598 (839)
.++.+++|.++ ++++++|.. ....+|||||+++++|.++|+.... ...
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766654 677888753 3568999999999999999864211 011
Q ss_pred ccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEeeccccceeCcc
Q 038743 599 RVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPE 678 (839)
Q Consensus 599 ~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE 678 (839)
..+++..+..++.|++.+|.|||+. +|+||||||+|||++.++.+||+|||+++.+............+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 2456778899999999999999985 8999999999999999999999999999765432222222233578999999
Q ss_pred cccCCC----------------------CCCcccEEehhHHHHHHHhCCC-CCCCCCCCC------Cccchhhhhhhhcc
Q 038743 679 WVSNRP----------------------ITVKADVYSYGMLLLEIVGGRR-NLDMSGDAE------DFFYPGWAFKEMTN 729 (839)
Q Consensus 679 ~~~~~~----------------------~s~~~DV~S~Gvvl~elltG~~-p~~~~~~~~------~~~~~~~~~~~~~~ 729 (839)
.+.... ...+.||||+||+++||++|.. |+....... ......| +....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~--r~~~~ 458 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW--RMYKG 458 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH--Hhhcc
Confidence 875422 1234799999999999999875 654221100 0011111 11111
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCC---CCCCCHHHHHH
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEV---FMRPSMGEVVK 775 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p---~~RPt~~~v~~ 775 (839)
... +- ...........+++.+++..+| .+|+|++|+++
T Consensus 459 ~~~----~~----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QKY----DF----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cCC----Cc----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 110 11 1111223445666777777655 78999999975
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.4e-28 Score=283.38 Aligned_cols=261 Identities=18% Similarity=0.171 Sum_probs=165.9
Q ss_pred HhhccccccccCCCceEEEEEeC-C----CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccce------eecC
Q 038743 503 RTSNFAQLLGTGGFGSVYKGSLG-D----GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGY------CSEG 571 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~------~~~~ 571 (839)
..+.+.++||+|+||.||+|.+. + +..||||++..... .+.+..| .+....+.+++.++.. +..+
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 45667789999999999999874 4 68999998864321 1111111 1122223333332222 2456
Q ss_pred CceEEEEeeccCCChhhhcccCCCC---------------CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCC
Q 038743 572 SNRLLVYEFMKNGSLDKWIFPSYHH---------------RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPE 636 (839)
Q Consensus 572 ~~~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~ 636 (839)
...++||||+++++|.+++...... .........+..++.||+.||+|||+. +|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHH
Confidence 7899999999999999988532100 000112234567999999999999995 9999999999
Q ss_pred cEEECC-CCceeecccCcceecCCCCceeEEeeccccceeCcccccCC----------------------CCCCcccEEe
Q 038743 637 NILLDE-NFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNR----------------------PITVKADVYS 693 (839)
Q Consensus 637 Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~~~DV~S 693 (839)
|||+++ ++.+||+|||+++.+............+++.|||||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 68999999999986644333333455689999999965322 2345679999
Q ss_pred hhHHHHHHHhCCCCCCCCCCC-------CCccchhhhhhhhccCcccccccccccCCC--CHHHHHHHHHHHHhccccCC
Q 038743 694 YGMLLLEIVGGRRNLDMSGDA-------EDFFYPGWAFKEMTNGTPLKVADRRLEGAV--EEEELMRAMKVAFWCIQDEV 764 (839)
Q Consensus 694 ~Gvvl~elltG~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~l~~~Cl~~~p 764 (839)
|||+||||+++..+.+..... ....+..|. ...... ..+.+...+ .........+++.+|++.||
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWR--KLVEPR----ASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHH--Hhhccc----cchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 999999999987665321100 000111110 000000 000000000 00112234578899999999
Q ss_pred CCCCCHHHHHHH
Q 038743 765 FMRPSMGEVVKM 776 (839)
Q Consensus 765 ~~RPt~~~v~~~ 776 (839)
.+|||+.++++.
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999875
No 387
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-29 Score=225.41 Aligned_cols=194 Identities=24% Similarity=0.372 Sum_probs=162.2
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCC
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
.++||+|.||+||+|+. ++++.||+|+++-.. ..-.....+|+-+++.++|.|||++++....+...-+|+|||..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq- 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence 46899999999999975 568999999985332 22345789999999999999999999999999999999999954
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
+|..|.. .-...++......++.|+++||.|+|++ .+.||||||.|.||+.+|+.||+|||+++-++-+-..
T Consensus 86 dlkkyfd----slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrc- 157 (292)
T KOG0662|consen 86 DLKKYFD----SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC- 157 (292)
T ss_pred HHHHHHH----hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEe-
Confidence 7777662 2455788889999999999999999996 8999999999999999999999999999987654322
Q ss_pred EEeeccccceeCcccccCC-CCCCcccEEehhHHHHHHHh-CCCCCCC
Q 038743 665 VTMVRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVG-GRRNLDM 710 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~ellt-G~~p~~~ 710 (839)
.+..+-|..|.+|.++.+. -|+...|+||-|||+.|+.. |++.|-+
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 2334468999999998875 58999999999999999995 4444443
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-29 Score=232.78 Aligned_cols=197 Identities=26% Similarity=0.416 Sum_probs=165.2
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccC-CcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccCC
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL-PHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
...||+|++|.|-+-++ .+|+..|+|++.... .+..+..++|+.+..+. .+|.+|.++|....+...++.||.|.-
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t- 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT- 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-
Confidence 35799999999999876 679999999996544 34456788999887665 899999999999999999999999954
Q ss_pred ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee
Q 038743 585 SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV 664 (839)
Q Consensus 585 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 664 (839)
||+.|-.+.. ..+..+.+..+=+||..+.+||.|||++ ..+||||+||+||||+.+|++||||||++..+.+.-.
T Consensus 130 Sldkfy~~v~-~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA-- 204 (282)
T KOG0984|consen 130 SLDKFYRKVL-KKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA-- 204 (282)
T ss_pred hHHHHHHHHH-hcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhhH--
Confidence 7877654332 3566788888999999999999999997 7899999999999999999999999999987644322
Q ss_pred EEeeccccceeCcccccC----CCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 665 VTMVRGTRGYLAPEWVSN----RPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 665 ~~~~~gt~~y~aPE~~~~----~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
.+...|...|||||.+.. ..|+.|+||||||+.+.||.+++.|++.
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 233457888999998853 4799999999999999999999999863
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1e-29 Score=265.30 Aligned_cols=238 Identities=24% Similarity=0.277 Sum_probs=190.9
Q ss_pred cccccccCCCceEEEEEeCCCc-EEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 507 FAQLLGTGGFGSVYKGSLGDGT-LVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~~-~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
....||-|+||.|-++..+... .+|+|++++.. ...++....|-++|...+.|.||+++-.+.+....||.||-|-
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaCl 503 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACL 503 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhc
Confidence 3458999999999999885443 48999886643 2334568899999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
||.|...|. .+..++..+..-++..+.+|++|||.. +||.|||||+|.+||.+|-+||.|||+|+.++. .
T Consensus 504 GGElWTiLr-----dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--g 573 (732)
T KOG0614|consen 504 GGELWTILR-----DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--G 573 (732)
T ss_pred Cchhhhhhh-----hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc--C
Confidence 999999993 445788888888899999999999994 999999999999999999999999999998754 3
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEG 742 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 742 (839)
..+-..+||+.|.|||++.+...+.++|.||||+++|||++|++||...+.-..+.++- .| +|. -
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL-------kG-----id~---i 638 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL-------KG-----IDK---I 638 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH-------hh-----hhh---h
Confidence 34567889999999999999999999999999999999999999998665433322211 11 010 0
Q ss_pred CCCHHHHHHHHHHHHhccccCCCCCCC
Q 038743 743 AVEEEELMRAMKVAFWCIQDEVFMRPS 769 (839)
Q Consensus 743 ~~~~~~~~~~~~l~~~Cl~~~p~~RPt 769 (839)
.++........+++.+....+|.+|..
T Consensus 639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 112222333455666667789999986
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1e-28 Score=263.52 Aligned_cols=242 Identities=24% Similarity=0.342 Sum_probs=185.9
Q ss_pred chHHHHHHhhc---c--ccccccCCCceEEEEEe-CCCcEEEEEEecccC---CcchHHHHHHHHHhhccccCCcccccc
Q 038743 496 TYRDLQIRTSN---F--AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMHHMNLVRLCG 566 (839)
Q Consensus 496 ~~~~l~~~~~~---~--~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g 566 (839)
.|..|+.+.-+ | .+.||-|+||+|.++.. ++...+|.|.|++.. +........|..||+....+.||+|+-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 45555554432 3 34799999999999954 556789999997643 233456788999999999999999999
Q ss_pred eeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCce
Q 038743 567 YCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCP 646 (839)
Q Consensus 567 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~ 646 (839)
.|.+.+.+|+||+|++||++-.+|. +-..+.+....-++..++.|+++.|.. ++|||||||.|||||.+|.+
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI-----rmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHI 768 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI-----RMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHI 768 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH-----HhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCce
Confidence 9999999999999999999999884 345677777777778899999999996 99999999999999999999
Q ss_pred eecccCcceecC---------C--C---C-----------------------ce----eEEeeccccceeCcccccCCCC
Q 038743 647 KVSDFGLAKLMG---------R--E---H-----------------------SQ----VVTMVRGTRGYLAPEWVSNRPI 685 (839)
Q Consensus 647 kl~DfGla~~~~---------~--~---~-----------------------~~----~~~~~~gt~~y~aPE~~~~~~~ 685 (839)
||.||||+.-+. . . + .+ .....+||+.|+|||++....+
T Consensus 769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~ 848 (1034)
T KOG0608|consen 769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY 848 (1034)
T ss_pred eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence 999999996441 0 0 0 00 0112469999999999999999
Q ss_pred CCcccEEehhHHHHHHHhCCCCCCCCCCCCC-ccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHH
Q 038743 686 TVKADVYSYGMLLLEIVGGRRNLDMSGDAED-FFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKV 755 (839)
Q Consensus 686 s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 755 (839)
+..+|.||.|||||||+.|+.||......+. +.+..| ...++-......+.+....+.++
T Consensus 849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw----------~~~l~~~~~~~ls~e~~~li~kL 909 (1034)
T KOG0608|consen 849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW----------RNFLHIPYQGNLSKEALDLIQKL 909 (1034)
T ss_pred cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh----------hhccccccccccCHHHHHHHHHH
Confidence 9999999999999999999999965443332 112222 22334444455666666666666
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-29 Score=274.99 Aligned_cols=242 Identities=25% Similarity=0.345 Sum_probs=182.5
Q ss_pred cccccCCCce-EEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 509 QLLGTGGFGS-VYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 509 ~~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
+++|.|+-|+ ||+|.+ +|+.||||++-. .-..-..+|+..++.- .|||||++++.-.++...|+..|.|. -+|
T Consensus 515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL 589 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSL 589 (903)
T ss_pred HHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhH
Confidence 4799998875 699999 789999998842 2234567899999888 69999999988889999999999995 499
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-----CCceeecccCcceecCCCC
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-----NFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-----~~~~kl~DfGla~~~~~~~ 661 (839)
++++... ........-...+.+..|++.||++||+. +||||||||.||||+. ..+++|+|||+++.+....
T Consensus 590 ~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 590 QDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 9999653 01111111144567889999999999995 9999999999999965 3579999999999876544
Q ss_pred cee--EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhC-CCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 662 SQV--VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGG-RRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 662 ~~~--~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
... .....||-+|+|||.+....-+.++||||+|||+|+.++| .+||......+. ..+........+.
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--------NIl~~~~~L~~L~- 736 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--------NILTGNYTLVHLE- 736 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--------hhhcCccceeeec-
Confidence 332 4556799999999999998889999999999999999987 899964332110 0000000000011
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
.. .++ ...+++..++.++|..||++.+|+.
T Consensus 737 ---~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 737 ---PL--PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---cC--chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11 111 6678888899999999999999964
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=243.49 Aligned_cols=200 Identities=24% Similarity=0.365 Sum_probs=170.9
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCc---chHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~ 578 (839)
...+.++||+|+|.+|.++++ ++.+.+|+|++++..-. +..-.+.|-.++.+. +||.+|.+..++..+..+++|.
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi 330 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI 330 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence 345678999999999999987 45789999999765322 222356677777665 7999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecC
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~ 658 (839)
||+++|+|--++ ++.+.|++....-+...|.-||.|||+. +||.||||..|||||..|.+||.|||+++.--
T Consensus 331 eyv~ggdlmfhm-----qrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 331 EYVNGGDLMFHM-----QRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEecCcceeeeh-----hhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999997766 4667888888888889999999999996 99999999999999999999999999998643
Q ss_pred CCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
. .....+...||+.|+|||.+++..|....|.|++||+++||+.|+.||+.-.
T Consensus 403 ~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg 455 (593)
T KOG0695|consen 403 G-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG 455 (593)
T ss_pred C-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence 2 2334567889999999999999999999999999999999999999997654
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-28 Score=234.86 Aligned_cols=193 Identities=27% Similarity=0.412 Sum_probs=164.6
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEecccCC--cchHHHHHHHHHhhccccCCcccccceeecC-----CceEEEEe
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG-----SNRLLVYE 579 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~~lv~e 579 (839)
.+.||-|+||.||-.+. .+|+.||+|++.+... ...+.+.+|++++...+|.|++..++...-. .+.|++.|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 46899999999999976 5799999999865432 2346788999999999999999998877543 35677888
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
.|.. +|.+.|. ....|+-..+.-+..||++||+|||+. +|.||||||.|.|++.+..+||+|||+++....
T Consensus 138 LmQS-DLHKIIV-----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 138 LMQS-DLHKIIV-----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHh-hhhheec-----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 8854 8888774 445677777788999999999999995 999999999999999999999999999999877
Q ss_pred CCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLD 709 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~ 709 (839)
+....++..+-|..|.|||.+.+ +.|+.+.||||.|||+.||+..+..|.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 77777777778999999999987 579999999999999999998877664
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=7.3e-26 Score=229.16 Aligned_cols=211 Identities=33% Similarity=0.538 Sum_probs=182.0
Q ss_pred cccCCCceEEEEEeCC-CcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChhh
Q 038743 511 LGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDK 588 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~ 588 (839)
||+|.+|.||++...+ ++.+++|++...... ....+.+|++.+..++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998854 899999999755332 34679999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecCCCCceeEEe
Q 038743 589 WIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGREHSQVVTM 667 (839)
Q Consensus 589 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~ 667 (839)
++... ...+++..+..++.+++++|++||+. +++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (215)
T cd00180 81 LLKEN----EGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT 152 (215)
T ss_pred HHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence 98422 14688999999999999999999995 9999999999999999 89999999999987654321 1223
Q ss_pred eccccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCH
Q 038743 668 VRGTRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEE 746 (839)
Q Consensus 668 ~~gt~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 746 (839)
..+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 4477889999999887 889999999999999998
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 747 EELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 747 ~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
..+.+++..|++.+|++||++.++++.+
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4577888889999999999999998643
No 395
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=99.93 E-value=3.7e-27 Score=210.88 Aligned_cols=98 Identities=47% Similarity=0.717 Sum_probs=70.4
Q ss_pred CCcEEEeeCCCCCCCC---CeEEEEecCCcEEEeCC-CeeEEEe-cCCCCc--eeEEEEeccccEEEecCCCCceeeccc
Q 038743 49 DRTVVWSANRNFPVTK---DAILELDTTGNLVLNDG-DTTIWAS-NSSGAG--VELATMSESGNFILYAPNNQPVWQSFL 121 (839)
Q Consensus 49 ~~tvVW~ANr~~pv~~---~~~l~l~~~G~Lvl~~~-~~~vWst-~~~~~~--~~~a~LldsGNlVl~~~~~~~lWQSFD 121 (839)
++||||+|||+.|+.. ..+|.|+.||+|+|.+. +..||+| ++.+.+ ...|+|+|+|||||++..+.+||||||
T Consensus 1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~ 80 (114)
T PF01453_consen 1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD 80 (114)
T ss_dssp ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence 3799999999999943 37999999999999995 4789999 555443 677999999999999999999999999
Q ss_pred CCCccccCCCCcccce------eeccCCccC
Q 038743 122 HPSDTLLPNQPLSVSL------ELTSPKSLQ 146 (839)
Q Consensus 122 ~PTDTlLpg~~l~~~~------~L~s~~s~~ 146 (839)
|||||+||||+|+.+. .|+||++..
T Consensus 81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~ 111 (114)
T PF01453_consen 81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNT 111 (114)
T ss_dssp SSS-EEEEEET--TSEEEEESTSSEEEESS-
T ss_pred CCccEEEeccCcccCCCccccceEEeECCCC
Confidence 9999999999998632 267776653
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=1.4e-26 Score=219.32 Aligned_cols=194 Identities=18% Similarity=0.337 Sum_probs=163.4
Q ss_pred HhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCcchHHHHHHHHHhhccc-cCCcccccceeecC--CceEEEE
Q 038743 503 RTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEG--SNRLLVY 578 (839)
Q Consensus 503 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~ 578 (839)
..|++.+++|+|.+++||.|. ..+.+.++||+++.. ..+.+.+|+++|..|. ||||++|++...+. ....||+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 346677899999999999995 567899999999744 4567899999999996 99999999998764 4678999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceec
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLM 657 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~ 657 (839)
||+.+.+...+. ..|+...+...+.++++||.|+|+. ||.|||+||.|++||. .-.++|+|+|+|.++
T Consensus 115 E~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 115 EYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhc
Confidence 999998887654 3567778888999999999999996 9999999999999985 457999999999987
Q ss_pred CCCCceeEEeeccccceeCcccccC-CCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 658 GREHSQVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 658 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
.+... ....+.+..|..||++.. ..|+..-|+|||||+|.+|+..+.||-...
T Consensus 184 Hp~~e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~ 237 (338)
T KOG0668|consen 184 HPGKE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 237 (338)
T ss_pred CCCce--eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC
Confidence 55433 233446778999998865 568999999999999999999999995443
No 397
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=99.93 E-value=1.9e-25 Score=202.20 Aligned_cols=110 Identities=35% Similarity=0.603 Sum_probs=96.8
Q ss_pred cCCCeEEeCCCeEEeeeecCCCCCCcEEEEEEeccCCCCCcEEEeeCCCCCCCCCeEEEEecCCcEEEeC-CCeeEEEec
Q 038743 11 SQDQAWISDNGTFAFGFTPIVNIQDRFQLGIWFNELPGDRTVVWSANRNFPVTKDAILELDTTGNLVLND-GDTTIWASN 89 (839)
Q Consensus 11 ~~~~~~vS~~g~F~lGF~~~~~~~~~~~lgIw~~~i~~~~tvVW~ANr~~pv~~~~~l~l~~~G~Lvl~~-~~~~vWst~ 89 (839)
.++++|+|++|.|++|||.+..+. .++++|||.+++ +++||.||++.|....+.|.|+.||+|+|.| ++.+||+|+
T Consensus 5 ~~~~~l~s~~~~f~~G~~~~~~q~-~dgnlv~~~~~~--~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~ 81 (116)
T cd00028 5 SSGQTLVSSGSLFELGFFKLIMQS-RDYNLILYKGSS--RTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSN 81 (116)
T ss_pred CCCCEEEeCCCcEEEecccCCCCC-CeEEEEEEeCCC--CeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEec
Confidence 458999999999999999886532 488999998853 7899999999996667899999999999998 567899999
Q ss_pred CCC-CceeEEEEeccccEEEecCCCCceeecccCC
Q 038743 90 SSG-AGVELATMSESGNFILYAPNNQPVWQSFLHP 123 (839)
Q Consensus 90 ~~~-~~~~~a~LldsGNlVl~~~~~~~lWQSFD~P 123 (839)
+.+ .+..+|+|+|+|||||++.++.++|||||||
T Consensus 82 ~~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P 116 (116)
T cd00028 82 TTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP 116 (116)
T ss_pred ccCCCCceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence 865 5666799999999999999999999999999
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-26 Score=243.95 Aligned_cols=192 Identities=25% Similarity=0.317 Sum_probs=162.4
Q ss_pred cccccccCCCceEEEEEeCC-CcEEEEEEecccCC--------cchHHHHHHHHHhhccc---cCCcccccceeecCCce
Q 038743 507 FAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLP--------HGEKEFVTEVNTIGSMH---HMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~ 574 (839)
..+.+|+|+||.|+.+.++. ...|+||.+.+... ...-..-.|+.+|..++ |+||++++++|++.+..
T Consensus 565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~y 644 (772)
T KOG1152|consen 565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYY 644 (772)
T ss_pred eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCee
Confidence 35689999999999998754 56899999865321 11123557999999997 99999999999999999
Q ss_pred EEEEeec-cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCc
Q 038743 575 LLVYEFM-KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 575 ~lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGl 653 (839)
||++|-. ++-+|.++| .....+++.+...|..||+.|+++||++ +|||||||-+||.++.+|-+||+|||.
T Consensus 645 yl~te~hg~gIDLFd~I-----E~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFI-----EFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred EEEecCCCCCcchhhhh-----hccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccc
Confidence 9999965 456888888 3556789999999999999999999997 999999999999999999999999999
Q ss_pred ceecCCCCceeEEeeccccceeCcccccCCCC-CCcccEEehhHHHHHHHhCCCCCC
Q 038743 654 AKLMGREHSQVVTMVRGTRGYLAPEWVSNRPI-TVKADVYSYGMLLLEIVGGRRNLD 709 (839)
Q Consensus 654 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DV~S~Gvvl~elltG~~p~~ 709 (839)
+..... ......+||.+|.|||++.+.+| ...-|||++|++||.++....||-
T Consensus 717 aa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 876432 23456789999999999999887 567899999999999998887763
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.4e-25 Score=228.38 Aligned_cols=197 Identities=31% Similarity=0.498 Sum_probs=170.6
Q ss_pred ccccccccCCCceEEEEEeCC-CcEEEEEEecccCCc-chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 506 NFAQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPH-GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+.+.||.|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||+++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 456789999999999998865 899999999765444 567889999999999999999999999999999999999999
Q ss_pred CChhhhcccCCCCCccc-CChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 584 GSLDKWIFPSYHHRDRV-LDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
++|.+++... .. +++..+..++.+++.+|.+||+. +++|+||+|.||+++.++.++|+|||++........
T Consensus 82 ~~L~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 82 GDLFDYLRKK-----GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999998432 22 78999999999999999999995 999999999999999999999999999987754431
Q ss_pred eeEEeeccccceeCcccc-cCCCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 663 QVVTMVRGTRGYLAPEWV-SNRPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~-~~~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
.......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334577889999998 667788899999999999999999999964
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-25 Score=217.59 Aligned_cols=251 Identities=19% Similarity=0.304 Sum_probs=185.0
Q ss_pred hhccccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccce-eecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGY-CSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~-~~~~~~~~lv~e~ 580 (839)
.|++.+.||+|.||.+-++++. ..+.+|+|.+... ....++|.+|...--.| .|.||+.-+.. +...+..++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 4678899999999999999874 5788999988765 34567899998875555 69999987765 5666788899999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE-C-CCCceeecccCcceecC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL-D-ENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill-~-~~~~~kl~DfGla~~~~ 658 (839)
+|.|+|..-+ ....+.+..-.+++.|++.||.|+|+ +.++|||||.+|||| + +...+||+|||+.+..+
T Consensus 104 aP~gdL~snv------~~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 104 APRGDLRSNV------EAAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred Cccchhhhhc------CcccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999998877 33456777788899999999999999 599999999999999 3 34589999999987543
Q ss_pred CCCceeEEeeccccceeCcccccCC-----CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccc
Q 038743 659 REHSQVVTMVRGTRGYLAPEWVSNR-----PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPL 733 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (839)
. ......-+..|.+||..... ...+.+|||.||++++.+++|+.||.-.. ....+.|-+..+..+...
T Consensus 175 ~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~---~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 175 T----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS---IMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred c----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh---ccCchHHHHHHHhcccCc
Confidence 2 12223345679999977542 34678999999999999999999997221 122344555555554433
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 038743 734 KVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKML 777 (839)
Q Consensus 734 ~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L 777 (839)
.+ |+.-.. ..++++++..+-+.+++++|--..++.++-
T Consensus 248 ~~--P~~F~~----fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 248 AL--PKKFNP----FSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred cC--chhhcc----cCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 11 111112 233455666667889999996555555543
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-25 Score=222.05 Aligned_cols=254 Identities=23% Similarity=0.249 Sum_probs=183.9
Q ss_pred cccccCCCceEEEE-EeCCCcEEEEEEecccC--CcchHHHHHHHHHhhccccCCcccccceeecC------CceEEEEe
Q 038743 509 QLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEG------SNRLLVYE 579 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~~lv~e 579 (839)
+.+|.|.- .|.-+ ..-.+++||+|++.... ....+...+|...+..++|+||++++.++.-. .+.++|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 46777777 44444 23358899999985442 23346788999999999999999999998643 46799999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
+|. .+|...+. -.++-..+..|..|+..|++|||+. +|+||||||+||++..+..+||.|||+|+.-+.
T Consensus 102 ~m~-~nl~~vi~-------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 102 LMD-ANLCQVIL-------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred hhh-hHHHHHHH-------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCc
Confidence 995 47877773 3466778889999999999999994 999999999999999999999999999986543
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCcc----------------chhhh
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFF----------------YPGWA 723 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~----------------~~~~~ 723 (839)
+ -..+....|..|.|||++.+..+.+.+||||.||++.||++|+..|.+......+. +..-+
T Consensus 171 ~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 171 D--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred c--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 3 34566778999999999999889999999999999999999998886543211110 00000
Q ss_pred hhhhccC-c-----ccccc-cccccC--CCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 724 FKEMTNG-T-----PLKVA-DRRLEG--AVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 724 ~~~~~~~-~-----~~~~~-~~~l~~--~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
....... + ..+++ |..... +.+......+..++.++|-.+|++|-+.+++++.
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000000 0 00000 100000 1112234456678888999999999999999875
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-25 Score=240.62 Aligned_cols=251 Identities=22% Similarity=0.240 Sum_probs=194.1
Q ss_pred hhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeecc
Q 038743 504 TSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
.|++.+.+|.|.+|.|||++. ..++..|||+++-.......-...|+-+++.-+|||||.++|-+...+..+++||||.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence 456778999999999999965 5789999999987656666677889999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|+|++.-+ -...+++.++...+....+||+|||+. +=+|||||-.|||+++.+.+|++|||.+-.+...-.
T Consensus 96 ggslQdiy~-----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 96 GGSLQDIYH-----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred CCcccceee-----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhh
Confidence 999998764 345788999999999999999999996 779999999999999999999999999876644332
Q ss_pred eeEEeeccccceeCcccc---cCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCccccccccc
Q 038743 663 QVVTMVRGTRGYLAPEWV---SNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRR 739 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~---~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (839)
+. ....||+.|||||+. +.+.|..++|||+.|+...|+---+.|...... .+.+.-......-.+.
T Consensus 168 Kr-ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----------mr~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 168 KR-KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----------MRALFLMTKSGFQPPT 236 (829)
T ss_pred hh-hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----------HHHHHHhhccCCCCCc
Confidence 22 234599999999977 357799999999999999999877766532111 1111000000111112
Q ss_pred ccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 740 LEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 740 l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
+... ....+.+-+++..|+..+|++||+++.+++
T Consensus 237 lkDk--~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 237 LKDK--TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccCC--ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2221 122344555666699999999999987654
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-24 Score=225.34 Aligned_cols=143 Identities=26% Similarity=0.371 Sum_probs=116.1
Q ss_pred CCcccchHHHHH-HhhccccccccCCCceEEEE-EeCCCcEEEEEEecccCCcchHHHHHHHHHhhccc-----c---CC
Q 038743 491 APVNFTYRDLQI-RTSNFAQLLGTGGFGSVYKG-SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-----H---MN 560 (839)
Q Consensus 491 ~~~~~~~~~l~~-~~~~~~~~lG~G~fg~Vy~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---~n 560 (839)
+-......|... ..|.+.++||-|.|++||++ ...+.+.||+|+.+.. ..=.+..+.|+++|++++ | ..
T Consensus 65 GYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 65 GYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred CCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 333445566666 78888999999999999999 5567889999998654 222345778999999883 3 36
Q ss_pred cccccceee----cCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCC
Q 038743 561 LVRLCGYCS----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPE 636 (839)
Q Consensus 561 iv~l~g~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~ 636 (839)
||+|+++|. .+.+.+||+|++ |-+|..+|... .-+.+....+..|+.||+.||.|||..| +|||-||||+
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s---~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPE 217 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS---NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPE 217 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHh---CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcc
Confidence 999999985 467999999998 55788887543 4567888999999999999999999985 9999999999
Q ss_pred cEEE
Q 038743 637 NILL 640 (839)
Q Consensus 637 Nill 640 (839)
|||+
T Consensus 218 NvLl 221 (590)
T KOG1290|consen 218 NVLL 221 (590)
T ss_pred eeee
Confidence 9999
No 404
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=99.91 E-value=4.6e-24 Score=192.61 Aligned_cols=108 Identities=35% Similarity=0.638 Sum_probs=95.5
Q ss_pred cCCCeEEeCCCeEEeeeecCCCCCCcEEEEEEeccCCCCCcEEEeeCCCCCCCCCeEEEEecCCcEEEeCC-CeeEEEec
Q 038743 11 SQDQAWISDNGTFAFGFTPIVNIQDRFQLGIWFNELPGDRTVVWSANRNFPVTKDAILELDTTGNLVLNDG-DTTIWASN 89 (839)
Q Consensus 11 ~~~~~~vS~~g~F~lGF~~~~~~~~~~~lgIw~~~i~~~~tvVW~ANr~~pv~~~~~l~l~~~G~Lvl~~~-~~~vWst~ 89 (839)
..+++|+|++|.|++|||.+.. ..++++|||+..+ +++||+||++.|+..++.|.|..||+|+|.+. +.+||+|+
T Consensus 5 ~~~~~l~s~~~~f~~G~~~~~~--q~dgnlV~~~~~~--~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~ 80 (114)
T smart00108 5 SSGQTLVSGNSLFELGFFTLIM--QNDYNLILYKSSS--RTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSN 80 (114)
T ss_pred CCCCEEecCCCcEeeeccccCC--CCCEEEEEEECCC--CcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEec
Confidence 4589999999999999998864 3578999999853 78999999999998778999999999999984 66899999
Q ss_pred CC-CCceeEEEEeccccEEEecCCCCceeecccC
Q 038743 90 SS-GAGVELATMSESGNFILYAPNNQPVWQSFLH 122 (839)
Q Consensus 90 ~~-~~~~~~a~LldsGNlVl~~~~~~~lWQSFD~ 122 (839)
+. +.+..+|+|+|+|||||++..+.++||||||
T Consensus 81 t~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~ 114 (114)
T smart00108 81 TTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114 (114)
T ss_pred ccCCCCceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence 85 5566679999999999999999999999997
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=9.9e-25 Score=228.78 Aligned_cols=214 Identities=22% Similarity=0.254 Sum_probs=178.9
Q ss_pred eeCCCcccchHHHHHHhhccccccccCCCceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccc------cCC
Q 038743 488 VCGAPVNFTYRDLQIRTSNFAQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH------HMN 560 (839)
Q Consensus 488 ~~~~~~~~~~~~l~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~n 560 (839)
-..+-..+.+.|+....|.+.-..|+|-|++|.+|.. ..|+.||||++.+. ....+.=+.|+++|.+|+ ..+
T Consensus 417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhH
Confidence 3445556788899999999999999999999999965 44889999999765 334455678999999994 447
Q ss_pred cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 561 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
.++|+-.|...++++||+|-+ .-+|.++|..- .....|....+..++.|+.-||..|... +|+|.||||.|||+
T Consensus 496 clrl~r~F~hknHLClVFE~L-slNLRevLKKy--G~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLV 569 (752)
T KOG0670|consen 496 CLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKY--GRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILV 569 (752)
T ss_pred HHHHHHHhhhcceeEEEehhh-hchHHHHHHHh--CcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEe
Confidence 899999999999999999987 44888888543 3556788889999999999999999985 99999999999999
Q ss_pred CCC-CceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCC
Q 038743 641 DEN-FCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMS 711 (839)
Q Consensus 641 ~~~-~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~ 711 (839)
++. ..+||||||.|....... .+.+.-+..|.|||++.+.+|+...|+||.||.||||.||+..|-+.
T Consensus 570 NE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 570 NESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 875 568999999998764432 33444567899999999999999999999999999999999888553
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=6.9e-25 Score=265.94 Aligned_cols=196 Identities=18% Similarity=0.276 Sum_probs=140.3
Q ss_pred cccc-CCccccccee-------ecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCC
Q 038743 555 SMHH-MNLVRLCGYC-------SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626 (839)
Q Consensus 555 ~l~h-~niv~l~g~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 626 (839)
.++| .||++++++| .+....++++||+ +++|.++|.. ....+++.+++.++.||++||+|||+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~--- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN----PDRSVDAFECFHVFRQIVEIVNAAHSQ--- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc----ccccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 4556 6888888887 2334667788887 6699999942 245689999999999999999999985
Q ss_pred eeeecCCCCCcEEECC-------------------CCceeecccCcceecCCCCc---------------eeEEeecccc
Q 038743 627 RIIHCDIKPENILLDE-------------------NFCPKVSDFGLAKLMGREHS---------------QVVTMVRGTR 672 (839)
Q Consensus 627 ~iiH~dlk~~Nill~~-------------------~~~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~ 672 (839)
+|+||||||+||||+. ++.+||+|||+++....... .......||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999954 45677777777764321000 0011235888
Q ss_pred ceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHH
Q 038743 673 GYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRA 752 (839)
Q Consensus 673 ~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 752 (839)
.|||||++.+..++.++|||||||+||||++|..|+..... ....+.. ..+.+.. .......
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---------~~~~~~~----~~~~~~~-----~~~~~~~ 241 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---------TMSSLRH----RVLPPQI-----LLNWPKE 241 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---------HHHHHHH----hhcChhh-----hhcCHHH
Confidence 99999999999999999999999999999999887642110 0001100 0111110 1123345
Q ss_pred HHHHHhccccCCCCCCCHHHHHHH
Q 038743 753 MKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 753 ~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
..++.+||+.+|.+||+|.||++.
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 677888999999999999999864
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.1e-24 Score=209.24 Aligned_cols=251 Identities=21% Similarity=0.334 Sum_probs=189.5
Q ss_pred hhccccccccCCCceEEEEEeCCCcEEEEEEec--ccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLD--RVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
..++..+|.+...|+.|+|++.. ..+++|++. .......++|..|.-.++...||||++++|.|....+..++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 34556789999999999999954 456667773 333444567999999999999999999999999999999999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH 661 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 661 (839)
+.|+|...|++. .....+-.+..+++.+||+|++|||+. .+-|..--|.++.|+||++.+++|+- +-+++.-..
T Consensus 270 p~gslynvlhe~---t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kfsfqe- 343 (448)
T KOG0195|consen 270 PFGSLYNVLHEQ---TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQE- 343 (448)
T ss_pred cchHHHHHHhcC---ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccceeeeec-
Confidence 999999999753 566788899999999999999999996 23344456899999999999998852 111111000
Q ss_pred ceeEEeeccccceeCcccccCCCCC---CcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccc
Q 038743 662 SQVVTMVRGTRGYLAPEWVSNRPIT---VKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADR 738 (839)
Q Consensus 662 ~~~~~~~~gt~~y~aPE~~~~~~~s---~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (839)
....-.+.||+||.++..+.+ .++|+|||+++||||.|...||.....-+. + ..+.-+
T Consensus 344 ----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec-------------g--mkiale 404 (448)
T KOG0195|consen 344 ----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC-------------G--MKIALE 404 (448)
T ss_pred ----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh-------------h--hhhhhc
Confidence 111235789999999876654 579999999999999999999964332111 0 112222
Q ss_pred cccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 739 RLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 739 ~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
.++..+++.....+.+++.-|+.+||.+||.+..|+-.|+..
T Consensus 405 glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 405 GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 333444555555667777779999999999999999999864
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.88 E-value=5.4e-23 Score=212.88 Aligned_cols=194 Identities=24% Similarity=0.337 Sum_probs=160.1
Q ss_pred ccccccccCCCceEEEEEeC----CCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEee
Q 038743 506 NFAQLLGTGGFGSVYKGSLG----DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 506 ~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
...++||+|.|++||++.+. ..+.||+|.+.... ......+|+++|..+ -+.||+++.+++..++...+|+||
T Consensus 39 ~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~ 116 (418)
T KOG1167|consen 39 KVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPY 116 (418)
T ss_pred hhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecc
Confidence 34579999999999999653 46789999986542 344688999999998 599999999999999999999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-CCceeecccCcceecCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~~~~ 659 (839)
++.-...+++. .++...+...+..+..||+++|. ++||||||||+|+|.+. .+.-.|.|||+|.....
T Consensus 117 ~~H~~f~~l~~--------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 117 FEHDRFRDLYR--------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred cCccCHHHHHh--------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 99999888873 46688899999999999999999 59999999999999974 45678999999972210
Q ss_pred CC---------------------------------c----------eeEEeeccccceeCcccccC-CCCCCcccEEehh
Q 038743 660 EH---------------------------------S----------QVVTMVRGTRGYLAPEWVSN-RPITVKADVYSYG 695 (839)
Q Consensus 660 ~~---------------------------------~----------~~~~~~~gt~~y~aPE~~~~-~~~s~~~DV~S~G 695 (839)
.. . .......||+||.|||++.. ..-+.+.||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 0 00123469999999998876 4568999999999
Q ss_pred HHHHHHHhCCCCCCCCC
Q 038743 696 MLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 696 vvl~elltG~~p~~~~~ 712 (839)
||++.+++++.||-...
T Consensus 266 VI~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAK 282 (418)
T ss_pred ceeehhhccccccccCc
Confidence 99999999999995443
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=6.5e-23 Score=202.17 Aligned_cols=166 Identities=22% Similarity=0.214 Sum_probs=123.3
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCce
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQ 663 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 663 (839)
|+|.+++.. .+..+++.+++.++.||+.||+|||+. + ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEV----RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc--
Confidence 688888842 245799999999999999999999996 3 999999999999999 99998764422
Q ss_pred eEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCC
Q 038743 664 VVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGA 743 (839)
Q Consensus 664 ~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 743 (839)
..|++.|||||++.+..++.++|||||||++|||++|+.||........ . ...+....... ++.. ..
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-----~-~~~~~~~~~~~--~~~~-~~ 130 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-----I-LEILLNGMPAD--DPRD-RS 130 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-----H-HHHHHHHhccC--Cccc-cc
Confidence 2588999999999999999999999999999999999999864322110 0 00110000000 0000 00
Q ss_pred CCHHHH--HHHHHHHHhccccCCCCCCCHHHHHHHhcC
Q 038743 744 VEEEEL--MRAMKVAFWCIQDEVFMRPSMGEVVKMLEG 779 (839)
Q Consensus 744 ~~~~~~--~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~ 779 (839)
...... ..+.+++.+|++.+|.+||++.++++.+..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 111112 258899999999999999999999998754
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=9.3e-22 Score=211.72 Aligned_cols=163 Identities=18% Similarity=0.186 Sum_probs=126.0
Q ss_pred HHhhccccccccCCCceEEEEEeC--CCcEEEEEEecccC-----CcchHHHHHHHHHhhccccCCcccccceeecCCce
Q 038743 502 IRTSNFAQLLGTGGFGSVYKGSLG--DGTLVAVKKLDRVL-----PHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 502 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 574 (839)
...|.+.+.||+|+||+||+|... +++.||||++.... ......|.+|++++.+++|+|+++.+.. ....
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~ 93 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKD 93 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCc
Confidence 345777889999999999999764 57788999875331 1124568999999999999999853322 2457
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCC-CCCcEEECCCCceeecccCc
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDI-KPENILLDENFCPKVSDFGL 653 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl-k~~Nill~~~~~~kl~DfGl 653 (839)
+|||||+++++|.... .. ....++.+++++|.|||+. +|+|||| ||+|||++.++.+||+|||+
T Consensus 94 ~LVmE~~~G~~L~~~~------~~------~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 94 GLVRGWTEGVPLHLAR------PH------GDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred EEEEEccCCCCHHHhC------cc------chHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 9999999999996321 00 0146788999999999995 9999999 99999999999999999999
Q ss_pred ceecCCCCcee-------EEeeccccceeCcccccC
Q 038743 654 AKLMGREHSQV-------VTMVRGTRGYLAPEWVSN 682 (839)
Q Consensus 654 a~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 682 (839)
++.+....... .....++..|+|||++..
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99875433111 134568889999998864
No 411
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.86 E-value=6.2e-22 Score=216.24 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=195.1
Q ss_pred hhccccCCcccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecC
Q 038743 553 IGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCD 632 (839)
Q Consensus 553 l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~d 632 (839)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+.. ....++|..+..+..+|++||+|||.. +-..|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN----EDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc----cccCccHHHHHHHHHHHHHHHHHHhcC--cceeeee
Confidence 3568899999999999999999999999999999999953 467899999999999999999999995 2339999
Q ss_pred CCCCcEEECCCCceeecccCcceecCCC-CceeEEeeccccceeCcccccCC-------CCCCcccEEehhHHHHHHHhC
Q 038743 633 IKPENILLDENFCPKVSDFGLAKLMGRE-HSQVVTMVRGTRGYLAPEWVSNR-------PITVKADVYSYGMLLLEIVGG 704 (839)
Q Consensus 633 lk~~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~~DV~S~Gvvl~elltG 704 (839)
++++|+++|..+.+||+|||+....... .........-...|.|||.+... ..+.++||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999999876431 11112222345679999998763 257889999999999999999
Q ss_pred CCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCCCCC
Q 038743 705 RRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSADIN 784 (839)
Q Consensus 705 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~~~~ 784 (839)
+.||......... .+ ....+.. .......|.+.... +....++.++..||..+|.+||++++|-..++......
T Consensus 155 ~~~~~~~~~~~~~--~e-ii~~~~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 155 SGPFDLRNLVEDP--DE-IILRVKK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred cCccccccccCCh--HH-HHHHHHh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 9999765433321 01 1111111 11112222222111 33336888999999999999999999999998766543
Q ss_pred --CCCCchhhHHHhhhchhhHHHhhhccCCcccceeecCCc
Q 038743 785 --TPPMPQTVLELIEEGLDHVYKAMKRDFNQFSSFTINSST 823 (839)
Q Consensus 785 --~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~ 823 (839)
....-+.+..+++.+.+.+++.+++.+.+...++.++..
T Consensus 229 ~~~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~e~~k~d~ 269 (484)
T KOG1023|consen 229 SSKGNLMDSLFRMLESYADNLEKLVDERTAELEEEKKKTDT 269 (484)
T ss_pred cccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 235667888999999999999888876666655554444
No 412
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=3.3e-20 Score=200.87 Aligned_cols=258 Identities=20% Similarity=0.249 Sum_probs=187.2
Q ss_pred hhccccccccCCCceEEEEEeCCC--cEEEEEEecccCCcchHHHHHHHHHhhcccc----CCccccccee-ecCCceEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDG--TLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH----MNLVRLCGYC-SEGSNRLL 576 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~-~~~~~~~l 576 (839)
.+.+.+.||+|+||.||++..... ..+|+|............+..|+.++..+.+ +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 566788999999999999976443 5788888765433333368888888888863 5788888888 47778899
Q ss_pred EEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC-----Cceeeccc
Q 038743 577 VYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN-----FCPKVSDF 651 (839)
Q Consensus 577 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~-----~~~kl~Df 651 (839)
||+.+ |.+|.++.... ..+.++..+.+.|+.|++.+|++||+. +++||||||.|+++... ..+.|.||
T Consensus 99 VM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 99876 77998876332 257899999999999999999999995 99999999999999754 46999999
Q ss_pred Ccce--ecCCCCce------e-EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhh
Q 038743 652 GLAK--LMGREHSQ------V-VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 652 Gla~--~~~~~~~~------~-~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 722 (839)
|+++ .+...... . ....+||..|++++.+.+...+.+.|+||++.++.|++.|..||.........
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~----- 246 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK----- 246 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH-----
Confidence 9999 33222211 1 23456999999999999999999999999999999999999998544322110
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCC
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGS 780 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~ 780 (839)
..+........... .....+.+...+.+. +-..+..++|....+...|+..
T Consensus 247 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 247 --SKFEKDPRKLLTDR--FGDLKPEEFAKILEY---IDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred --HHHHHHhhhhcccc--ccCCChHHHHHHHHH---hhccCCcCCCCHHHHHHHHHHH
Confidence 00000000001110 112233344444443 4557889999999998887654
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=5.7e-21 Score=191.01 Aligned_cols=198 Identities=23% Similarity=0.314 Sum_probs=168.6
Q ss_pred hccccccccCCCceEEEEE-eCCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccceeecCCceEEEEeecc
Q 038743 505 SNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
+.+.++||+|.||.++.|+ +-++++||||.-...+ ..-++..|.+..+.| ..++|...+-|-.++.+-.||+|.+
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 5678899999999999994 5689999999764432 233577888888888 5799999998889999999999987
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-----CCceeecccCcceec
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-----NFCPKVSDFGLAKLM 657 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-----~~~~kl~DfGla~~~ 657 (839)
|.||+++. .-.++.++..++..+|.|++.-++|+|+. .+|.|||||+|+||.. ...+.|+|||+|+.+
T Consensus 107 GPSLEDLF----D~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 107 GPSLEDLF----DLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred CcCHHHHH----HHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 77898876 24678999999999999999999999995 9999999999999953 346899999999988
Q ss_pred CCCCcee------EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 658 GREHSQV------VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 658 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
.+..... .....||.+||+-....++.-+.+.|+-|+|.++.+.|.|..||.+..
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 6654433 234569999999999999999999999999999999999999997654
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=3.5e-21 Score=184.26 Aligned_cols=259 Identities=19% Similarity=0.228 Sum_probs=190.5
Q ss_pred HHHhhccccccccCCCceEEEEE-eCCCcEEEEEEecccCCcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEE
Q 038743 501 QIRTSNFAQLLGTGGFGSVYKGS-LGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 501 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ 578 (839)
....+.+.++||.|+||.+|.|. ..+|+.||||.-++...+ -++..|.++...|+ ...|..+..+..++..-.|||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34556788999999999999995 578999999987654333 35778999999996 478899999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC---CCceeecccCcce
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE---NFCPKVSDFGLAK 655 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~---~~~~kl~DfGla~ 655 (839)
+.+ +.+|++++. -..+.++..+.+.++-|++.-++|+|.. ++|||||||+|+|..- ...+.|+|||+|+
T Consensus 91 dLL-GPsLEdLfn----fC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 91 DLL-GPSLEDLFN----FCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred ecc-CccHHHHHH----HHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 987 778988762 3567899999999999999999999995 9999999999999853 3468899999999
Q ss_pred ecCCCCcee------EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhcc
Q 038743 656 LMGREHSQV------VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTN 729 (839)
Q Consensus 656 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 729 (839)
.+.+..... .....||.+|.+-....+..-+.+.|+-|+|.+|.++..|..||.+....... ...+++.+
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~----QKyEkI~E 238 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK----QKYEKISE 238 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH----HHHHHHHH
Confidence 875433322 23456999999988888888899999999999999999999999765432110 01112222
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhc
Q 038743 730 GTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 730 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
.++. ..-..+...++. ++.-.+.-|-..--++-|...-+.+++.
T Consensus 239 kK~s-~~ie~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 239 KKMS-TPIEVLCKGFPA----EFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred hhcC-CCHHHHhCCCcH----HHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 2111 111122222332 2333344477777777777665555543
No 415
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=99.82 E-value=2.3e-20 Score=166.89 Aligned_cols=109 Identities=27% Similarity=0.678 Sum_probs=79.0
Q ss_pred ccccccCCCCCCcccCceEEeeccCCcceeeeccCCCccEEEEecCCCccccccccccccccceeEEEEEecCCcEEEEE
Q 038743 184 ANKSYWSGPDISNVTGDVVAVLDEAGSFGIVYGESSNGAVYVYQNDGDYDGLASATNKSTRLTVLRRLILETNGNLRLYR 263 (839)
Q Consensus 184 ~~~~yW~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~l~~y~ 263 (839)
||++.|+|..+++.+.+... ..+. |.|..+....+.++. ..+.++++|++||++|++|+|.
T Consensus 1 wrsG~WnG~~f~g~p~~~~~-----~~~~-----------~~fv~~~~e~~~t~~---~~~~s~~~r~~ld~~G~l~~~~ 61 (110)
T PF00954_consen 1 WRSGPWNGQRFSGIPEMSSN-----SLYN-----------YSFVSNNEEVYYTYS---LSNSSVLSRLVLDSDGQLQRYI 61 (110)
T ss_pred CCccccCCeEECCccccccc-----ceeE-----------EEEEECCCeEEEEEe---cCCCceEEEEEEeeeeEEEEEE
Confidence 57899999888877754311 1111 222222222112211 1234688999999999999999
Q ss_pred eecCCCCCCCceeeccccCCCCccccccc-ccccccCCCCCCCceeecCCCCcCC
Q 038743 264 WDNDVNGSRQWVPEWAAVSNPCNIAGICG-KGICNLDRSKTKASCTCLPGDSKIG 317 (839)
Q Consensus 264 w~~~~~~~~~W~~~~~~p~d~Cd~yg~CG-~g~C~~~~~~~~~~C~Cl~Gf~~~~ 317 (839)
|+ +..+.|.+.|.+|.|+||+|+.|| +|+|+.+. .|.|+||+||+|++
T Consensus 62 w~---~~~~~W~~~~~~p~d~Cd~y~~CG~~g~C~~~~---~~~C~Cl~GF~P~n 110 (110)
T PF00954_consen 62 WN---ESTQSWSVFWSAPKDQCDVYGFCGPNGICNSNN---SPKCSCLPGFEPKN 110 (110)
T ss_pred Ee---cCCCcEEEEEEecccCCCCccccCCccEeCCCC---CCceECCCCcCCCc
Confidence 95 457789999999999999999999 69998654 67899999999974
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80 E-value=7.8e-19 Score=190.98 Aligned_cols=261 Identities=27% Similarity=0.367 Sum_probs=194.0
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEecccCCc---chHHHHHHHHHhhccccC-CcccccceeecCCceEEEEee
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH---GEKEFVTEVNTIGSMHHM-NLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.+.+.||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 345678999999999999886 88999999665433 256799999999999888 799999999777778999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC-ceeecccCcceecCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF-CPKVSDFGLAKLMGR 659 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGla~~~~~ 659 (839)
+.+++|.+++...... ..+.......++.|++.++.|+|+. +++|||+||+||+++... .++++|||+++.+..
T Consensus 80 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 80 VDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999776322110 3688889999999999999999995 899999999999999988 799999999986654
Q ss_pred CCce-----eEEeeccccceeCcccccC---CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCc
Q 038743 660 EHSQ-----VVTMVRGTRGYLAPEWVSN---RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGT 731 (839)
Q Consensus 660 ~~~~-----~~~~~~gt~~y~aPE~~~~---~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 731 (839)
.... ......|+..|+|||.+.+ .......|+|++|++++++++|..|+....... ........+....
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~ 231 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS---ATSQTLKIILELP 231 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc---cHHHHHHHHHhcC
Confidence 3322 2355679999999999987 678999999999999999999999965433210 0000111111000
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 732 PLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 732 ~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.. .................+.+++..|+..+|..|.++.+....
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred Cc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 000000000002223456777888999999999999987764
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=1.6e-19 Score=179.00 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=108.0
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCc--c-------hHH-----------------HHHHHHHhhccccCCc
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH--G-------EKE-----------------FVTEVNTIGSMHHMNL 561 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni 561 (839)
...||+|+||.||+|...+|+.||||+++..... . ... ...|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999998888999999999643211 1 111 2349999999988877
Q ss_pred ccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHh-hhccCCeeeecCCCCCcEEE
Q 038743 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF-HEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 562 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiH~dlk~~Nill 640 (839)
.....+.. ...+|||||+++++|...+. ....++......++.|++.+|.|| |+ .+|+||||||+|||+
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~-----~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL-----KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh-----hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence 44333222 23489999999987765431 234678889999999999999999 56 489999999999999
Q ss_pred CCCCceeecccCcceecC
Q 038743 641 DENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~~ 658 (839)
+ ++.++|+|||++....
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 4789999999997543
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=1.2e-19 Score=181.44 Aligned_cols=174 Identities=11% Similarity=0.124 Sum_probs=135.2
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHH---------HHHHHHHhhccccCCccccccee
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKE---------FVTEVNTIGSMHHMNLVRLCGYC 568 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~g~~ 568 (839)
.++....+...++||.|+||.||+... ++..+|||.+........+. +.+|++.+.++.|++|..+..++
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 455566777889999999999999766 57789999997554333322 67899999999999999998885
Q ss_pred ecC--------CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 569 SEG--------SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 569 ~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
... ...+|+|||++|.+|.++.. ++. ....+++.+|..||+. +++|||+||+||++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili 168 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV 168 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence 532 35789999999999987641 111 3466999999999995 99999999999999
Q ss_pred CCCCceeecccCcceecCCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHH
Q 038743 641 DENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ell 702 (839)
+.++ ++|+|||.......+... ..++....+..++|+|+||+.+.-+.
T Consensus 169 ~~~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 169 SKNG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred eCCC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9988 999999988754322111 11344556778999999999987664
No 419
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=3.7e-20 Score=212.65 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=182.7
Q ss_pred ccccccCCCceEEEEEe-CCCcEEEEEEeccc--CCcchH----HHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 508 AQLLGTGGFGSVYKGSL-GDGTLVAVKKLDRV--LPHGEK----EFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~----~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
..++|.|++|.|+.... ...+..+.|..... ...... .+..|..+-..++|||++..+..+.+....+-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 56899999997777743 33444444433210 111111 245677777788999999988888887777777999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCC
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
+++ +|..++. ....+...++..+..|+..|++|||+. +|.|||||++|++++.++.+||+|||.+..+.-.
T Consensus 403 ~~~-Dlf~~~~-----~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 403 CPY-DLFSLVM-----SNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred ccH-HHHHHHh-----cccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 999 9999883 224677788889999999999999996 9999999999999999999999999999887554
Q ss_pred Cce---eEEeeccccceeCcccccCCCCCC-cccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccc
Q 038743 661 HSQ---VVTMVRGTRGYLAPEWVSNRPITV-KADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVA 736 (839)
Q Consensus 661 ~~~---~~~~~~gt~~y~aPE~~~~~~~s~-~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (839)
... ......|...|+|||.+.+..|.. ..||||.|+++..|++|+.||.......... . ..... .+.-
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~----~~~~~---~~~~ 545 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-K----TNNYS---DQRN 545 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-h----hhccc---cccc
Confidence 443 345677999999999999988864 6899999999999999999996544322211 0 00000 0000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 737 DRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 737 ~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
...-...+......+...++.++++.+|.+|-||++|++.
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000011122345566778889999999999999999764
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.9e-18 Score=172.14 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=110.6
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcc--------------------------hHHHHHHHHHhhccccCCc
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG--------------------------EKEFVTEVNTIGSMHHMNL 561 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~--------------------------~~~~~~E~~~l~~l~h~ni 561 (839)
...||+|+||.||+|...+|+.||||++....... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35799999999999988789999999986542110 1123578899999999987
Q ss_pred ccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC
Q 038743 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD 641 (839)
Q Consensus 562 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~ 641 (839)
.....+... ..+|||||++++++...+. ....++......++.+++.+|.+||+. .+|+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l-----~~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL-----KDVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh-----hhccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE
Confidence 554444332 3489999999886543321 223567788899999999999999982 3999999999999999
Q ss_pred CCCceeecccCcceecCC
Q 038743 642 ENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 642 ~~~~~kl~DfGla~~~~~ 659 (839)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 78999999999987643
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.75 E-value=5.7e-19 Score=201.10 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=181.7
Q ss_pred hhccccccccCCCceEEEEEeCCCcEEEEEEecccC-CcchHHHHHHHHH--hhccccCCcccccceeecCCceEEEEee
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVL-PHGEKEFVTEVNT--IGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
...+.+.||.+.|=+|.+++.++|. |+||++-+.. ....+.|.++++- ...++|||.+++.-.....+..|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4566789999999999999998888 9999985544 3344555554443 4455899999998887778888999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec--C
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM--G 658 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~--~ 658 (839)
+.+ +|.+.| ..+..|...+..-|+.|++.||..+|.. +|+|||||.+||||+.-.-+.|+||.--+.. .
T Consensus 103 vkh-nLyDRl-----STRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 103 VKH-NLYDRL-----STRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred Hhh-hhhhhh-----ccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 865 787777 3456677888889999999999999995 9999999999999999888999999877532 1
Q ss_pred CCCc----eeEEeeccccceeCcccccC----------CC-CCCcccEEehhHHHHHHHh-CCCCCCCCCCCCCccchhh
Q 038743 659 REHS----QVVTMVRGTRGYLAPEWVSN----------RP-ITVKADVYSYGMLLLEIVG-GRRNLDMSGDAEDFFYPGW 722 (839)
Q Consensus 659 ~~~~----~~~~~~~gt~~y~aPE~~~~----------~~-~s~~~DV~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 722 (839)
.+.. ......+.-..|+|||.+.. .. .+++-||||+||++.||++ |+++|+... .
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ---------L 244 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ---------L 244 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH---------H
Confidence 1111 11333445567999998743 12 5788999999999999996 577775321 0
Q ss_pred hhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhcCCC
Q 038743 723 AFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 723 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~L~~~~ 781 (839)
. ..+.+. ....+.+...++ -..+.++++.|++.||.+|-+++++++.-.+..
T Consensus 245 ~--aYr~~~--~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 245 L--AYRSGN--ADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred H--hHhccC--ccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 0 000010 000000000111 114667888899999999999999999876654
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=6.6e-18 Score=164.95 Aligned_cols=184 Identities=16% Similarity=0.069 Sum_probs=138.0
Q ss_pred cccccccCCCceEEEEEeCCCcEEEEEEecccCCcch----HHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeec
Q 038743 507 FAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGE----KEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~----~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
....|++|+||+||.+.- .+.+++.+.+........ ..+.+|+++|.+|+ |+++++++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 356899999999998766 678888887765432111 24789999999994 5889999886 4569999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCC-CCCcEEECCCCceeecccCcceecCCC
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDI-KPENILLDENFCPKVSDFGLAKLMGRE 660 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl-k~~Nill~~~~~~kl~DfGla~~~~~~ 660 (839)
.|.+|...+. . ....++.|++++|.++|+. +|+|||| ||.|||++.++.++|+|||++......
T Consensus 81 ~G~~L~~~~~-----~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 81 AGAAMYQRPP-----R-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred cCccHHhhhh-----h-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9999865431 0 1235778999999999995 9999999 799999999999999999999865433
Q ss_pred Cce----e--------EEeeccccceeCcccccCC-CCC-CcccEEehhHHHHHHHhCCCCCCC
Q 038743 661 HSQ----V--------VTMVRGTRGYLAPEWVSNR-PIT-VKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 661 ~~~----~--------~~~~~gt~~y~aPE~~~~~-~~s-~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
... . ......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+.-.
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 210 0 0112357778888754332 223 567889999999999999987643
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=3.3e-17 Score=191.34 Aligned_cols=198 Identities=23% Similarity=0.272 Sum_probs=159.9
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccc---cCCcccccceeecCCce
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH---HMNLVRLCGYCSEGSNR 574 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~ 574 (839)
-++....+.+.+.||+|+||.||+|...+|+.||||+-+..... +|.--.+++.+|+ -+-|..+...+.-.+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 34445566778899999999999999888999999987654332 2333334444554 23444555555667888
Q ss_pred EEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC-------CCCcee
Q 038743 575 LLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD-------ENFCPK 647 (839)
Q Consensus 575 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~-------~~~~~k 647 (839)
+||+||.+.|+|.+++. ..+.++|.....++.|+++.++.||.. +|||+||||+|+||. +..-++
T Consensus 770 ~lv~ey~~~Gtlld~~N-----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN-----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred eeeeeccccccHHHhhc-----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 99999999999999994 567899999999999999999999996 999999999999993 344689
Q ss_pred ecccCcceecCCCCc-eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCC
Q 038743 648 VSDFGLAKLMGREHS-QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRR 706 (839)
Q Consensus 648 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~ 706 (839)
|+|||.+-.+.-... .......+|-.+-.+|+..+++++...|-|.|+.+++-||.|+.
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999976543322 34666778999999999999999999999999999999999984
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=4.3e-17 Score=162.95 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=103.2
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcc-----ccCCcccccceeecCC---c-eEEEE
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-----HHMNLVRLCGYCSEGS---N-RLLVY 578 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~---~-~~lv~ 578 (839)
.+.||+|+||.||. ++.....+||++........+++.+|++++..+ .||||++++|++.+.. . ..+|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 35899999999996 443333479988654444567899999999999 5799999999998764 3 23789
Q ss_pred ee--ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHh-HHhhhccCCeeeecCCCCCcEEECC----CCceeeccc
Q 038743 579 EF--MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI-AYFHEQCRNRIIHCDIKPENILLDE----NFCPKVSDF 651 (839)
Q Consensus 579 e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~iiH~dlk~~Nill~~----~~~~kl~Df 651 (839)
|| +++|+|.+++.. ..+++. ..++.+++.++ +|||++ +|+||||||+|||++. +..++|+||
T Consensus 85 e~~G~~~~tL~~~l~~------~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 85 DFDGKPSITLTEFAEQ------CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred cCCCCcchhHHHHHHc------ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 99 668999999932 234444 35677888777 999995 9999999999999974 347999995
Q ss_pred Ccc
Q 038743 652 GLA 654 (839)
Q Consensus 652 Gla 654 (839)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 425
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.70 E-value=2.1e-17 Score=170.28 Aligned_cols=231 Identities=22% Similarity=0.292 Sum_probs=145.6
Q ss_pred cccccccCCCceEEEEEeC-CCcEEEEEEecccC---CcchHHHHHHHHHhhccc----------cCCcccccceee---
Q 038743 507 FAQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVL---PHGEKEFVTEVNTIGSMH----------HMNLVRLCGYCS--- 569 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~l~g~~~--- 569 (839)
..+.||.|+++.||.++.. +++.+|||+..... ....+++.+|.-.+..+. |-.++..++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4568999999999999875 58999999984322 233456777766555532 222222222221
Q ss_pred ------cCC--------ceEEEEeeccCCChhhhcc---cCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecC
Q 038743 570 ------EGS--------NRLLVYEFMKNGSLDKWIF---PSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCD 632 (839)
Q Consensus 570 ------~~~--------~~~lv~e~~~~gsL~~~l~---~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~d 632 (839)
... +.+++|+-+ .++|.+++. ... .....+....++.+..|+++.+++||+. +++|+|
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~-~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRA-QTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHT-TTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcc-cccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 111 235667766 557777642 221 1134556677788889999999999996 999999
Q ss_pred CCCCcEEECCCCceeecccCcceecCCCCceeEEeeccccceeCcccccC--------CCCCCcccEEehhHHHHHHHhC
Q 038743 633 IKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN--------RPITVKADVYSYGMLLLEIVGG 704 (839)
Q Consensus 633 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~~DV~S~Gvvl~elltG 704 (839)
|||+|+|++.+|.++|+||+.....+... .....+..|.+||.... -.++.+.|.|++|+++|.|+||
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRY----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEE----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCcee----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999998877644321 11335577999997644 2478899999999999999999
Q ss_pred CCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCC
Q 038743 705 RRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMR 767 (839)
Q Consensus 705 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~R 767 (839)
+.||+........ .| .+ ..+. +..+.+..++...++.+|.+|
T Consensus 247 ~lPf~~~~~~~~~---~~----------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADP---EW----------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTS---GG----------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccc---cc----------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999754322111 00 11 1222 556667778888999999887
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.7e-16 Score=161.34 Aligned_cols=142 Identities=17% Similarity=0.168 Sum_probs=108.7
Q ss_pred hccccccccCCCceEEEEE--eCCCcEEEEEEecccCCc------------------------chHHHHHHHHHhhcccc
Q 038743 505 SNFAQLLGTGGFGSVYKGS--LGDGTLVAVKKLDRVLPH------------------------GEKEFVTEVNTIGSMHH 558 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~h 558 (839)
+.+.+.||+|+||.||+|. ..+|+.||||++...... ....+..|+..+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999998 578999999998643210 01235689999999975
Q ss_pred CC--cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCe-eeecCCCC
Q 038743 559 MN--LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNR-IIHCDIKP 635 (839)
Q Consensus 559 ~n--iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlk~ 635 (839)
.. +.+++++ ...++||||+++++|..++. ....+...+...++.||+.+|++||+. + |+||||||
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL-----KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCccccccc-----ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 33 3344432 23589999999988876542 123345556778999999999999996 7 99999999
Q ss_pred CcEEECCCCceeecccCcceecCC
Q 038743 636 ENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 636 ~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
+||+++ ++.++|+|||++...+.
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccCC
Confidence 999999 88999999999876443
No 427
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.65 E-value=2.1e-17 Score=180.27 Aligned_cols=186 Identities=26% Similarity=0.319 Sum_probs=154.4
Q ss_pred ccccCCCceEEEEE----eCCCcEEEEEEecccCCcc--hHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeecc
Q 038743 510 LLGTGGFGSVYKGS----LGDGTLVAVKKLDRVLPHG--EKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFMK 582 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~----~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~ 582 (839)
++|+|.||.|++.+ .+.|..+|.|.+.+..... ......|..++...+ ||.+|++.-.+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999873 2457788888886543211 114566788888886 9999999999999999999999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCc
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHS 662 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 662 (839)
+|.|...+. ....+++.........++-+++++|+. +|+|||+|++||+++.+|.+|+.|||+++..-....
T Consensus 81 gg~lft~l~-----~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 81 GGDLFTRLS-----KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cchhhhccc-----cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 999988773 445666666667778889999999994 999999999999999999999999999987543322
Q ss_pred eeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCC
Q 038743 663 QVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDM 710 (839)
Q Consensus 663 ~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~ 710 (839)
. .||..|||||++. .....+|-||||++.+||++|..||..
T Consensus 153 ~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 A-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred c-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 2 6899999999988 678899999999999999999999975
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=6e-16 Score=157.31 Aligned_cols=134 Identities=19% Similarity=0.270 Sum_probs=112.8
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCc--------chHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH--------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
+.||+|++|.||+|.. +|..|+||+....... ....+.+|++++..++|++++....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 7788999986543211 123577899999999999998888787777889999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
+++++|.+++... .. .+..++.+++.+|.+||+. +++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988321 11 7889999999999999995 999999999999999 78899999999864
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.2e-15 Score=153.13 Aligned_cols=137 Identities=17% Similarity=0.134 Sum_probs=107.2
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEecccCCc----------------------chHHHHHHHHHhhccccCC--
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH----------------------GEKEFVTEVNTIGSMHHMN-- 560 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~E~~~l~~l~h~n-- 560 (839)
+.+.+.||+|+||.||++...+|+.||||++...... ....+..|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5567899999999999998888999999987532100 0113567888888888874
Q ss_pred cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 561 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
++..++ ....++||||+++++|..... ......++.+++.++.++|+. +|+||||||.||++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------~~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill 158 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV-----------LEDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILV 158 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc-----------cccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEE
Confidence 444443 234589999999999876541 034457889999999999995 99999999999999
Q ss_pred CCCCceeecccCcceecCC
Q 038743 641 DENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~~~ 659 (839)
++++.++|+|||++.....
T Consensus 159 ~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cCCCcEEEEECCccccCCC
Confidence 9999999999999975543
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=5.4e-16 Score=158.93 Aligned_cols=197 Identities=22% Similarity=0.255 Sum_probs=136.7
Q ss_pred ccCCcccccceeec---------------------------CCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHH
Q 038743 557 HHMNLVRLCGYCSE---------------------------GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNI 609 (839)
Q Consensus 557 ~h~niv~l~g~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 609 (839)
+|||||++.++|.+ ....|+||.-.+. +|.++|. .+..+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~------~~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW------TRHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh------cCCCchHHHHHH
Confidence 79999999887754 2456788876544 8888884 335667778889
Q ss_pred HHHHHHHhHHhhhccCCeeeecCCCCCcEEE--CCCC--ceeecccCcceecCCCC-----ceeEEeeccccceeCcccc
Q 038743 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILL--DENF--CPKVSDFGLAKLMGREH-----SQVVTMVRGTRGYLAPEWV 680 (839)
Q Consensus 610 ~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill--~~~~--~~kl~DfGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~ 680 (839)
+.|+++|+.|||.+ +|.|||+|+.|||| |+|+ .+.|+|||.+---.... ........|...-||||+.
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 99999999999997 99999999999998 4554 46889999875322211 1112234578889999988
Q ss_pred cCCCC------CCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHH
Q 038743 681 SNRPI------TVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMK 754 (839)
Q Consensus 681 ~~~~~------s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 754 (839)
...+- -.|+|.|+.|.+.||++....||...++.. +... ...+-.-+ ..+......+.+
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~---L~~r--------~Yqe~qLP----alp~~vpp~~rq 488 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML---LDTR--------TYQESQLP----ALPSRVPPVARQ 488 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe---echh--------hhhhhhCC----CCcccCChHHHH
Confidence 65331 258999999999999999999996422110 0000 00000111 222333445667
Q ss_pred HHHhccccCCCCCCCHHHHHHHhc
Q 038743 755 VAFWCIQDEVFMRPSMGEVVKMLE 778 (839)
Q Consensus 755 l~~~Cl~~~p~~RPt~~~v~~~L~ 778 (839)
++...++.+|.+||+..-....|.
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHH
Confidence 777789999999999877666653
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=1e-15 Score=177.13 Aligned_cols=133 Identities=17% Similarity=0.263 Sum_probs=108.8
Q ss_pred cccccccCCCceEEEEEeCCCcEEEEEE-ecccCCc-------chHHHHHHHHHhhccccCCcccccceeecCCceEEEE
Q 038743 507 FAQLLGTGGFGSVYKGSLGDGTLVAVKK-LDRVLPH-------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~-l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~ 578 (839)
..+.||+|+||+||+|.+.+.. +++|+ +.+.... ....+.+|++++..++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 4678999999999999885544 44443 3221111 1245889999999999999998888887777889999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
||+++++|.+++. ....++.+++++|.|||+. +++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999998872 3567999999999999995 99999999999999 6778999999999753
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=4.6e-17 Score=174.34 Aligned_cols=123 Identities=24% Similarity=0.444 Sum_probs=107.5
Q ss_pred ceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccC
Q 038743 573 NRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFG 652 (839)
Q Consensus 573 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfG 652 (839)
..++.|++|...+|.+||... ......++...+.++.|++.|+.| ++.+|+|+||.||++..+..+||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr--~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRR--RTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCC--CcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 578999999999999999543 244567788899999999999999 289999999999999999999999999
Q ss_pred cceecCCCC-----ceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHh
Q 038743 653 LAKLMGREH-----SQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVG 703 (839)
Q Consensus 653 la~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ellt 703 (839)
+........ ....+...||..||+||.+.+..|+.|+||||||+||+|++.
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 998765544 233556779999999999999999999999999999999996
No 433
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=9.5e-16 Score=154.28 Aligned_cols=130 Identities=19% Similarity=0.281 Sum_probs=106.6
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEecccC-Cc-------chHHHHHHHHHhhccccCCcccccceeecCCceEEEEeec
Q 038743 510 LLGTGGFGSVYKGSLGDGTLVAVKKLDRVL-PH-------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFM 581 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~ 581 (839)
.||+|+||.||+|.+ ++..|++|...... .. ...++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999986 67889999864322 11 1245778999999999888766666666677789999999
Q ss_pred cCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 582 KNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 582 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
++++|.+++... .. .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~-----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG-----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc-----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999887321 10 7899999999999995 999999999999999 88999999999875
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=2.5e-14 Score=142.44 Aligned_cols=138 Identities=20% Similarity=0.162 Sum_probs=97.4
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcc--hHH----------------------HHHHHHHhhccccCC--c
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG--EKE----------------------FVTEVNTIGSMHHMN--L 561 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 561 (839)
.+.||+|+||.||+|...+++.||||++....... ... ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999986432111 111 124555555554332 3
Q ss_pred ccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEEC
Q 038743 562 VRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLD 641 (839)
Q Consensus 562 v~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~ 641 (839)
.+.+++ ...++||||++++.+....... .... .....++.+++.++.++|.. .+|+|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-----~~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD-----VRLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh-----hhhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE
Confidence 333332 2468999999996543221111 0011 56778999999999999983 3899999999999999
Q ss_pred CCCceeecccCcceecC
Q 038743 642 ENFCPKVSDFGLAKLMG 658 (839)
Q Consensus 642 ~~~~~kl~DfGla~~~~ 658 (839)
++.++|+|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997553
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=5.1e-14 Score=134.53 Aligned_cols=134 Identities=20% Similarity=0.188 Sum_probs=114.1
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcccc--CCcccccceeecCCceEEEEeeccCCC
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH--MNLVRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
.+.||+|.++.||++...+ ..+++|....... ...+..|+.++..++| .++++++++....+..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 3679999999999999854 7899999865432 4578999999999976 589999988888888999999999887
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
+..+ +......++.+++++|++||.....+++|+|++|+||++++.+.+++.|||.++.
T Consensus 80 ~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 7432 4566778899999999999986556899999999999999989999999999874
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=1.2e-13 Score=142.12 Aligned_cols=134 Identities=20% Similarity=0.182 Sum_probs=103.5
Q ss_pred cccc-cCCCceEEEEEeCCCcEEEEEEecccC-------------CcchHHHHHHHHHhhccccCCc--ccccceeecCC
Q 038743 509 QLLG-TGGFGSVYKGSLGDGTLVAVKKLDRVL-------------PHGEKEFVTEVNTIGSMHHMNL--VRLCGYCSEGS 572 (839)
Q Consensus 509 ~~lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~~~ 572 (839)
..|| .|+.|+||++... +..++||++.... ......+.+|++++.+++|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4788 8999999999884 7789999874310 1123457889999999998875 66776654322
Q ss_pred c----eEEEEeeccC-CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCcee
Q 038743 573 N----RLLVYEFMKN-GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPK 647 (839)
Q Consensus 573 ~----~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~k 647 (839)
. .++|+|++++ .+|.+++.. ..++. ..+.+|+.+|.+||+. +|+||||||.|||++.++.++
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~------~~l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE------APLSE----EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc------CCCCH----HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 2599999997 689888732 22332 2467899999999995 999999999999999988999
Q ss_pred ecccCccee
Q 038743 648 VSDFGLAKL 656 (839)
Q Consensus 648 l~DfGla~~ 656 (839)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999875
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.48 E-value=1.3e-14 Score=165.99 Aligned_cols=162 Identities=23% Similarity=0.312 Sum_probs=114.7
Q ss_pred ccccccCCCceEEEEEeC-CCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCCh
Q 038743 508 AQLLGTGGFGSVYKGSLG-DGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSL 586 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL 586 (839)
.+.|..|++|.||..++. ..+++|+|+-++.. +.+- ++.....|.+| |+=
T Consensus 88 IklisngAygavylvrh~~trqrfa~kiNkq~l------ilRn--ilt~a~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKINKQNL------ILRN--ILTFAGNPFVV---------------------GDC 138 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcccccch------hhhc--cccccCCccee---------------------chh
Confidence 468999999999999875 36788885432221 1110 22222333333 232
Q ss_pred hhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCC-----
Q 038743 587 DKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREH----- 661 (839)
Q Consensus 587 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~----- 661 (839)
...+.. -..+. .+++.+++|||+ .+|+|||+||.|.+|+.-|.+|+.|||+.+......
T Consensus 139 ~tllk~-----~g~lP--------vdmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 139 ATLLKN-----IGPLP--------VDMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred hhhccc-----CCCCc--------chhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 222311 11111 223789999999 599999999999999999999999999997542110
Q ss_pred -------cee--EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCC
Q 038743 662 -------SQV--VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDA 714 (839)
Q Consensus 662 -------~~~--~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~ 714 (839)
.+. ...++||+.|+|||++..+.|...+|.|++|+|+||.+-|..||.+....
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 011 23467999999999999999999999999999999999999999866433
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=6.7e-14 Score=161.22 Aligned_cols=254 Identities=23% Similarity=0.276 Sum_probs=181.1
Q ss_pred hhccccccccCCCceEEEEEeC--CCcEEEEEEecccC--CcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEE
Q 038743 504 TSNFAQLLGTGGFGSVYKGSLG--DGTLVAVKKLDRVL--PHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 504 ~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~ 578 (839)
.+.+.+.||+|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++.+++...+.+..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 3556677999999999988653 34566777665432 111223445777767775 999999999999999999999
Q ss_pred eeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhh-hccCCeeeecCCCCCcEEECCCC-ceeecccCccee
Q 038743 579 EFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH-EQCRNRIIHCDIKPENILLDENF-CPKVSDFGLAKL 656 (839)
Q Consensus 579 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiH~dlk~~Nill~~~~-~~kl~DfGla~~ 656 (839)
+|..++++.+.+.. ......+....-....|+..++.|+| + .++.|+||||+|.+++..+ ..+++|||+|..
T Consensus 101 ~~s~g~~~f~~i~~---~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 101 SYSDGGSLFSKISH---PDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred Cccccccccccccc---CCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999887731 11114455566678899999999999 5 5999999999999999999 999999999998
Q ss_pred cCC-C-CceeEEeecc-ccceeCcccccCC-CCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcc
Q 038743 657 MGR-E-HSQVVTMVRG-TRGYLAPEWVSNR-PITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTP 732 (839)
Q Consensus 657 ~~~-~-~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (839)
+.. . .........| ++.|+|||...+. ......|+||.|+++.-+++|..|++........ +..|..... .
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~~---~- 249 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKSNKG---R- 249 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeeccccc---c-
Confidence 766 2 2233455667 9999999998884 4578899999999999999999999765543321 111211110 0
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 038743 733 LKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVK 775 (839)
Q Consensus 733 ~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~ 775 (839)
..............++...++..+|..|.+.+++..
T Consensus 250 -------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 -------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred -------cccCccccCChhhhhcccccccCCchhccccccccc
Confidence 000001112223445556677789999988777643
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=3.1e-12 Score=143.12 Aligned_cols=141 Identities=21% Similarity=0.225 Sum_probs=98.5
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcc----------------------------------------hHHHHH
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG----------------------------------------EKEFVT 548 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~~~~ 548 (839)
+.||.|++|.||+|++.+|+.||||+.+...... +-+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 4799999999999999999999999985432110 012445
Q ss_pred HHHHhhccc----cCCccccccee-ecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHH-HhHHhhh
Q 038743 549 EVNTIGSMH----HMNLVRLCGYC-SEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ-GIAYFHE 622 (839)
Q Consensus 549 E~~~l~~l~----h~niv~l~g~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~yLH~ 622 (839)
|++.+.+++ |.+-+.+-..+ ......+|||||++|++|.+++... ...+ .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~----~~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD----EAGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH----hcCC---CHHHHHHHHHHHHHHHHHh
Confidence 555555542 22222222222 2234679999999999998876321 0111 34567777766 4677887
Q ss_pred ccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 623 ~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
. +++|+|+||.||+++.++.++|+|||++..+..
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 4 999999999999999999999999999987643
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.1e-12 Score=131.92 Aligned_cols=154 Identities=20% Similarity=0.337 Sum_probs=117.3
Q ss_pred HHhhccccCCcccccceeecC-----CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccC
Q 038743 551 NTIGSMHHMNLVRLCGYCSEG-----SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCR 625 (839)
Q Consensus 551 ~~l~~l~h~niv~l~g~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 625 (839)
.-|-++-|.|||++..|..+. ....++.|||..|+|..+|.... .....+......+++.||..||.|||+ |.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~-~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK-KNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH-HhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 345556799999999988653 45689999999999999996542 344567777788999999999999998 57
Q ss_pred CeeeecCCCCCcEEECCCCceeecccCcceec---CCCCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHH
Q 038743 626 NRIIHCDIKPENILLDENFCPKVSDFGLAKLM---GREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIV 702 (839)
Q Consensus 626 ~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~ell 702 (839)
++|+|+++..+-|++..++-+||.--.-...- ............+.++|.|||+-.....+..+|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 89999999999999999998887532211100 000001122334778999999887778889999999999999998
Q ss_pred hCCC
Q 038743 703 GGRR 706 (839)
Q Consensus 703 tG~~ 706 (839)
-+..
T Consensus 277 ilEi 280 (458)
T KOG1266|consen 277 ILEI 280 (458)
T ss_pred Hhee
Confidence 7763
No 441
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=99.27 E-value=7.1e-12 Score=100.11 Aligned_cols=64 Identities=20% Similarity=0.362 Sum_probs=48.9
Q ss_pred CCccceeeeecccccCCccceeccccCCcChHHHHHhhcCCCceeEEEeecCCCCCeEEEeeeccCC
Q 038743 341 SHDYRIASVQQTNYYFPEYSVIANYSDIATVSKCGDACLSNCQCVASVYGLDDEKPYCWVLRSLDFG 407 (839)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~y~~~~~~~~C~~~~~~~~~ 407 (839)
.++++|.+++++++ |++.......+ .++++|+++||+||||+||+|.+..++++|++|.+.+++
T Consensus 2 ~~~d~F~~l~~~~~--p~~~~~~~~~~-~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d 65 (66)
T PF08276_consen 2 GSGDGFLKLPNMKL--PDFDNAIVDSS-VSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD 65 (66)
T ss_pred cCCCEEEEECCeeC--CCCcceeeecC-CCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence 45678999998887 55433222233 589999999999999999999753477999999877664
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=6.5e-11 Score=115.68 Aligned_cols=130 Identities=16% Similarity=0.063 Sum_probs=96.6
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcc-cccceeecCCceEEEEeeccCCChh
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLV-RLCGYCSEGSNRLLVYEFMKNGSLD 587 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lv~e~~~~gsL~ 587 (839)
+.|+.|.++.||+++.. ++.+++|....... ....+..|++++..+.+.+++ +++.+. ....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 46889999999999874 77899998754321 233567899999988665554 444433 33468999999998875
Q ss_pred hhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhcc--CCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 588 KWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQC--RNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 588 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
... .....++.+++++|+.||... ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~-------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED-------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 420 112346788999999999852 23469999999999999 66899999998863
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=7.3e-11 Score=129.77 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=179.7
Q ss_pred HHHHHHhhcccccccc--CCCceEEEEEe---CCCcEEEEEEecccCC--cchHHHHHHHHHhhcc-ccCCcccccceee
Q 038743 498 RDLQIRTSNFAQLLGT--GGFGSVYKGSL---GDGTLVAVKKLDRVLP--HGEKEFVTEVNTIGSM-HHMNLVRLCGYCS 569 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~ 569 (839)
.+.......+.+.+|. |.+|.||.+.. .++..+|+|+-+.... .....=.+|+.....+ .|+|.++......
T Consensus 109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence 4455556677889999 99999999977 4578899998543322 3333445666666666 5999999888888
Q ss_pred cCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHH----HhHHhhhccCCeeeecCCCCCcEEECCC-C
Q 038743 570 EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ----GIAYFHEQCRNRIIHCDIKPENILLDEN-F 644 (839)
Q Consensus 570 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~iiH~dlk~~Nill~~~-~ 644 (839)
..+..++-.|++. .+|..+.+. ....+.....+.+..+... ||..+|.. .++|-|+||.||++..+ .
T Consensus 189 ~~~~lfiqtE~~~-~sl~~~~~~----~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 189 GSGILFIQTELCG-ESLQSYCHT----PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred cCCcceeeecccc-chhHHhhhc----ccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 8889999999875 688777643 3344566667777777777 99999994 99999999999999999 8
Q ss_pred ceeecccCcceecCCCCcee----EEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCccch
Q 038743 645 CPKVSDFGLAKLMGREHSQV----VTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDFFYP 720 (839)
Q Consensus 645 ~~kl~DfGla~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~~~~ 720 (839)
..+++|||+...++...... .....|...|++||... +.++.++|+|++|.+.+|..++.+.....- ..
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~------~~ 333 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGK------NS 333 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCC------CC
Confidence 89999999999886544221 12235788899999754 457889999999999999999887654221 11
Q ss_pred hhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 038743 721 GWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVVKM 776 (839)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~~~ 776 (839)
.|. ++..+- +..++.......+...+..+++.+|..|++.+.++..
T Consensus 334 ~W~--~~r~~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 334 SWS--QLRQGY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred Ccc--cccccc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 221 111111 1111111112223336667899999999988777653
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.12 E-value=7.6e-11 Score=133.24 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=88.4
Q ss_pred cccccCCCceEEEEEeCC-CcEEEEEEecccCCcc----------------------------------h------HHHH
Q 038743 509 QLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVLPHG----------------------------------E------KEFV 547 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~----------------------------------~------~~~~ 547 (839)
+.||.|++|.||+|++.+ |+.||||+++...... . -++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 489999999999999987 9999999996432100 0 1134
Q ss_pred HHHHHhhccc----cCCcccccceeec-CCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHH-hHHhh
Q 038743 548 TEVNTIGSMH----HMNLVRLCGYCSE-GSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQG-IAYFH 621 (839)
Q Consensus 548 ~E~~~l~~l~----h~niv~l~g~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~-L~yLH 621 (839)
+|+..+.+++ +.+.+.+=.++.+ ....+|||||++|+.+.++-.- .....+ +..++...++. +..++
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l----~~~g~d---~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL----RAAGTD---MKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH----HhcCCC---HHHHHHHHHHHHHHHHH
Confidence 4444444442 3222222222222 3467899999999999774210 011111 11222222221 12223
Q ss_pred hccCCeeeecCCCCCcEEECCCC----ceeecccCcceecCC
Q 038743 622 EQCRNRIIHCDIKPENILLDENF----CPKVSDFGLAKLMGR 659 (839)
Q Consensus 622 ~~~~~~iiH~dlk~~Nill~~~~----~~kl~DfGla~~~~~ 659 (839)
. .+++|+|+||.||+++.++ .+++.|||++..+..
T Consensus 278 ~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 4999999999999999888 999999999987754
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.06 E-value=1.5e-09 Score=111.18 Aligned_cols=142 Identities=20% Similarity=0.264 Sum_probs=109.2
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCC-cchHHHHHHHHHhhcccc--CCcccccceeecCC---ceEEEEeecc
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLP-HGEKEFVTEVNTIGSMHH--MNLVRLCGYCSEGS---NRLLVYEFMK 582 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~---~~~lv~e~~~ 582 (839)
+.|+.|..+.||+++..+|+.+++|....... .....+..|++++..+++ .++.+++.+..+.. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999887778999999754322 134578899999999865 44577777766543 5689999999
Q ss_pred CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhc---------------------------------------
Q 038743 583 NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ--------------------------------------- 623 (839)
Q Consensus 583 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------------------- 623 (839)
+.+|.+.+. ...++...+..++.+++++|++||+.
T Consensus 84 G~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLL------RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCC------CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 998876552 12456667777888888888888852
Q ss_pred --------------cCCeeeecCCCCCcEEECC--CCceeecccCccee
Q 038743 624 --------------CRNRIIHCDIKPENILLDE--NFCPKVSDFGLAKL 656 (839)
Q Consensus 624 --------------~~~~iiH~dlk~~Nill~~--~~~~kl~DfGla~~ 656 (839)
....++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1256899999999999998 66789999998864
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.3e-09 Score=101.16 Aligned_cols=131 Identities=20% Similarity=0.283 Sum_probs=101.8
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEe-cccCCcc-------hHHHHHHHHHhhccccCCcccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKL-DRVLPHG-------EKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l-~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~ 580 (839)
..+++|+-+.+|.+.+- |.++++|.- .+..... .....+|++++.+++--.|...+=+..+.....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999773 444666653 3332222 13467899999998766666656667788899999999
Q ss_pred ccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 581 MKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 581 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
.++..|.++|... +..++..+-.-+.-||. .+|+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888321 35678888888899999 4999999999999998765 99999999975
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.01 E-value=2.1e-09 Score=105.56 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=97.0
Q ss_pred cccccCCCceEEEEEeCC-------CcEEEEEEecccC----------C------------cchHHH----HHHHHHhhc
Q 038743 509 QLLGTGGFGSVYKGSLGD-------GTLVAVKKLDRVL----------P------------HGEKEF----VTEVNTIGS 555 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~----------~------------~~~~~~----~~E~~~l~~ 555 (839)
-.||.|--+.||.|.-.+ +..+|||+.+-.. . ...+.+ .+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999997643 4799999874210 0 001122 379999988
Q ss_pred ccc--CCcccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHh-hhccCCeeeecC
Q 038743 556 MHH--MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF-HEQCRNRIIHCD 632 (839)
Q Consensus 556 l~h--~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiH~d 632 (839)
+.. -++.+++++ ...+|||||+.+..+..-.. .+..++..+...+..+++.+|..| |. .+|+|+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L-----kd~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL-----KDAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh-----hccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 853 455566654 56789999998754422110 122344445667889999999999 66 4999999
Q ss_pred CCCCcEEECCCCceeecccCcceecCC
Q 038743 633 IKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 633 lk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
|++.|||++ ++.+.|+|||.+.....
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 999999997 46799999999876543
No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.99 E-value=2.3e-09 Score=119.08 Aligned_cols=231 Identities=15% Similarity=0.169 Sum_probs=146.7
Q ss_pred EeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCC
Q 038743 523 SLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLD 602 (839)
Q Consensus 523 ~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~ 602 (839)
+..++.+|.|...+...........+-++.++.++||||++++.........|||.|-+. .|..++. .+.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk--------~l~ 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLK--------ELG 102 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHH--------HhH
Confidence 445788899988876544233446777889999999999999999999999999999864 3444442 122
Q ss_pred hhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeEEeeccccceeCcccccC
Q 038743 603 WTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSN 682 (839)
Q Consensus 603 ~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 682 (839)
....--.+.||+.||.|||+. .+++|++|.-..|++++.|..||++|.++.......... ....---.|..|+.+..
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~-~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA-KSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc-ccchhhhcccChhhcCc
Confidence 445556788999999999986 589999999999999999999999999886543222100 00011123455554322
Q ss_pred CCCCCcccEEehhHHHHHHHhCCCCCCCCCCCCCc-cchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccc
Q 038743 683 RPITVKADVYSYGMLLLEIVGGRRNLDMSGDAEDF-FYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQ 761 (839)
Q Consensus 683 ~~~s~~~DV~S~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~ 761 (839)
.. -..|.|-||++++|++.|..+- ..+.... ..+. ...++.-+.+. ........ .++.+..|..
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~~~~--~~~~~~~~~ipk---------~~~~~~~k~~~-~~~~~r~n-~~~~~~~~~~ 244 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGSLLT--KTDLSNTGKIPK---------ALIELYCKKLG-ATELKRPN-KLRFILECRL 244 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCcccCc--chhhhccCccch---------hHHHHHHHHhc-cccccccc-hhhHHHHHHh
Confidence 21 3469999999999999983221 1111000 0000 00001100110 00011111 4556666777
Q ss_pred cCCCCCCCHHHHHHHhcCCC
Q 038743 762 DEVFMRPSMGEVVKMLEGSA 781 (839)
Q Consensus 762 ~~p~~RPt~~~v~~~L~~~~ 781 (839)
..+--|=-+-+++..|++..
T Consensus 245 ~~gff~n~fvd~~~fLeel~ 264 (690)
T KOG1243|consen 245 LGGFFRNDFVDTLLFLEELR 264 (690)
T ss_pred ccccccchHHHHHHHHHhcc
Confidence 77777777788888887653
No 449
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Probab=98.97 E-value=1.2e-09 Score=92.97 Aligned_cols=71 Identities=20% Similarity=0.377 Sum_probs=52.5
Q ss_pred cceeeeecccccCCccceeccccCCcChHHHHHhhcCCCceeEEEeecCCCCCeEEEeeeccCCCccC--CCCceEEEEe
Q 038743 344 YRIASVQQTNYYFPEYSVIANYSDIATVSKCGDACLSNCQCVASVYGLDDEKPYCWVLRSLDFGGFED--PSSTLFVKIM 421 (839)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~y~~~~~~~~C~~~~~~~~~g~~~--~~~~lylkl~ 421 (839)
+.|..+++++++ ++.... ...++++|+++||+||+|+||+|. +++++|++|...+.+.... ++.++|+|++
T Consensus 12 ~~f~~~~~~~~~--~~~~~~---~~~s~~~C~~~Cl~nCsC~a~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~yiKv~ 84 (84)
T cd01098 12 DGFLKLPDVKLP--DNASAI---TAISLEECREACLSNCSCTAYAYN--NGSGGCLLWNGLLNNLRSLSSGGGTLYLRLA 84 (84)
T ss_pred CEEEEeCCeeCC--Cchhhh---ccCCHHHHHHHHhcCCCcceeeec--CCCCeEEEEeceecceEeecCCCcEEEEEeC
Confidence 578888877774 333211 335899999999999999999997 3468999998877765432 3478999973
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.94 E-value=1e-09 Score=120.79 Aligned_cols=192 Identities=24% Similarity=0.307 Sum_probs=145.8
Q ss_pred hccccccccCCCceEEEEEe--CCCcEEEEEEecccCCcchHH--HHHHHHHhhcc-ccCCcccccceeecCCceEEEEe
Q 038743 505 SNFAQLLGTGGFGSVYKGSL--GDGTLVAVKKLDRVLPHGEKE--FVTEVNTIGSM-HHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e 579 (839)
.++...||.|.|+.|++... .++..+++|.+.+.......+ -..|+-+...+ .|.++++....+..-+..++=-|
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e 346 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE 346 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence 44566899999999999854 467899999886654433322 24555555555 58888888877777788889999
Q ss_pred eccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC-CceeecccCcceecC
Q 038743 580 FMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN-FCPKVSDFGLAKLMG 658 (839)
Q Consensus 580 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~-~~~kl~DfGla~~~~ 658 (839)
|++++++...+ .....++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..++.|||.+..+.
T Consensus 347 ~~~~~s~~l~~-----~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 347 FCEGGSSSLRS-----VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred hhcCcchhhhh-----HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccccc
Confidence 99999987766 234578888999999999999999998 599999999999999876 788999999986421
Q ss_pred CCCceeEEeeccccce-eCcccccCCCCCCcccEEehhHHHHHHHhCCCC
Q 038743 659 REHSQVVTMVRGTRGY-LAPEWVSNRPITVKADVYSYGMLLLEIVGGRRN 707 (839)
Q Consensus 659 ~~~~~~~~~~~gt~~y-~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p 707 (839)
-. .......+..| .+++......+-.+.|++|||.-+.|.+++..-
T Consensus 419 ~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 419 FS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred ee---cccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 11 11111223334 356666677888999999999999999988743
No 451
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.90 E-value=1.1e-08 Score=96.00 Aligned_cols=142 Identities=21% Similarity=0.327 Sum_probs=102.9
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEE-ecccCCc-------chHHHHHHHHHhhccccCCcccccceeecCCceEEEEe
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKK-LDRVLPH-------GEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYE 579 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~-l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e 579 (839)
...|-+|+-+.|+++.+ .|+...||. +.+..+. ..+...+|++.+.+++--.|.-..-++.+...-.|+||
T Consensus 12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 35788999999999998 567666664 3333222 23457889999998865555544456667777789999
Q ss_pred eccC-CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCC---ceeecccCcce
Q 038743 580 FMKN-GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENF---CPKVSDFGLAK 655 (839)
Q Consensus 580 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~---~~kl~DfGla~ 655 (839)
|+++ .++.+++.... ...........++..|-+.+.-||. ++|||+||..+||+|..++ .+.++|||++.
T Consensus 91 ~~~g~~~vk~~i~~~~---~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTM---EDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred eccchhHHHHHHHHHc---cCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchh
Confidence 9987 57888875331 1111222236788899999999998 5999999999999996443 46899999986
Q ss_pred e
Q 038743 656 L 656 (839)
Q Consensus 656 ~ 656 (839)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 452
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=98.79 E-value=6.6e-09 Score=85.70 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=48.0
Q ss_pred CccceeeeecccccCCccceeccccCCcChHHHHHhhcC---CCceeEEEeecCCCCCeEEEeeecc-CCC--ccCCCCc
Q 038743 342 HDYRIASVQQTNYYFPEYSVIANYSDIATVSKCGDACLS---NCQCVASVYGLDDEKPYCWVLRSLD-FGG--FEDPSST 415 (839)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~---nCsC~A~~y~~~~~~~~C~~~~~~~-~~g--~~~~~~~ 415 (839)
....|..+.+++ .|+... .+++||+++|++ ||||+||+|... +.+|++|...+ .+. +.+.+.+
T Consensus 7 ~~g~fl~~~~~k--lpd~~~-------~s~~eC~~~Cl~~~~nCsC~Aya~~~~--~~gC~~W~~~l~~d~~~~~~~g~~ 75 (80)
T cd00129 7 SAGTTLIKIALK--IKTTKA-------NTADECANRCEKNGLPFSCKAFVFAKA--RKQCLWFPFNSMSGVRKEFSHGFD 75 (80)
T ss_pred cCCeEEEeeccc--CCcccc-------cCHHHHHHHHhcCCCCCCceeeeccCC--CCCeEEecCcchhhHHhccCCCce
Confidence 344566555555 466543 488999999999 999999999732 35798887776 543 3444678
Q ss_pred eEEE
Q 038743 416 LFVK 419 (839)
Q Consensus 416 lylk 419 (839)
+|+|
T Consensus 76 Ly~r 79 (80)
T cd00129 76 LYEN 79 (80)
T ss_pred eEeE
Confidence 9987
No 453
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.77 E-value=6.7e-08 Score=104.05 Aligned_cols=171 Identities=16% Similarity=0.230 Sum_probs=130.8
Q ss_pred CceEEEEEe-CCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCcccccceee----cCCceEEEEeeccC-CChhhh
Q 038743 516 FGSVYKGSL-GDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCS----EGSNRLLVYEFMKN-GSLDKW 589 (839)
Q Consensus 516 fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----~~~~~~lv~e~~~~-gsL~~~ 589 (839)
-.+.||+.. -||..+++|++.....+.......-++.++++.|.|+|++..++. ....+++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357888854 589999999995443333333455678899999999999998876 34578999999986 678776
Q ss_pred cccCCCC----------CcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 590 IFPSYHH----------RDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 590 l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
-+..... ....+.+..+|.++.|++.||.++|+. |+.-+-|.+++||++.+.+++|+..|+..+...
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 6543222 234567889999999999999999996 888899999999999999999999888876654
Q ss_pred CCceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCC
Q 038743 660 EHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRN 707 (839)
Q Consensus 660 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p 707 (839)
+.. |-+. --.+-|.=.||.+++.|.||...
T Consensus 446 d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 331 1111 12466888899999999999754
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.72 E-value=1.1e-07 Score=93.26 Aligned_cols=126 Identities=22% Similarity=0.241 Sum_probs=82.9
Q ss_pred eEEEEEeCCCcEEEEEEecccC--------------C-------cc-----hHHHHHHHHHhhccccC--Ccccccceee
Q 038743 518 SVYKGSLGDGTLVAVKKLDRVL--------------P-------HG-----EKEFVTEVNTIGSMHHM--NLVRLCGYCS 569 (839)
Q Consensus 518 ~Vy~~~~~~~~~vavK~l~~~~--------------~-------~~-----~~~~~~E~~~l~~l~h~--niv~l~g~~~ 569 (839)
.||.|..++|..+|||..+... . .. .....+|.+.|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 3899999999999999874210 0 00 12357899999999755 45666544
Q ss_pred cCCceEEEEeecc--CCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHh-hhccCCeeeecCCCCCcEEECCCCce
Q 038743 570 EGSNRLLVYEFMK--NGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYF-HEQCRNRIIHCDIKPENILLDENFCP 646 (839)
Q Consensus 570 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiH~dlk~~Nill~~~~~~ 646 (839)
....|||||++ +..+..+. ...++......++.+++..+..+ |. .+|+|+||.+.|||++++ .+
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~-------~~~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLK-------DVDLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHH-------HCGGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CE
T ss_pred --eCCEEEEEecCCCccchhhHH-------hccccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eE
Confidence 24579999998 55554432 11222445667888888866664 56 599999999999999988 89
Q ss_pred eecccCcceecC
Q 038743 647 KVSDFGLAKLMG 658 (839)
Q Consensus 647 kl~DfGla~~~~ 658 (839)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999987654
No 455
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.66 E-value=7.9e-09 Score=119.54 Aligned_cols=197 Identities=21% Similarity=0.247 Sum_probs=136.6
Q ss_pred ccccccCCCceEEEEEeC-CCcEEEEEEecc---cCCcchHHHHHHHHHhhccccCCcccccceeecCCceEEEEeeccC
Q 038743 508 AQLLGTGGFGSVYKGSLG-DGTLVAVKKLDR---VLPHGEKEFVTEVNTIGSMHHMNLVRLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.+-+-+|.++.++.++-. .|...++|.... ......+....+-.++-..+||-+++..--+.-.....|+++|..+
T Consensus 809 ~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~ 888 (1205)
T KOG0606|consen 809 TKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNG 888 (1205)
T ss_pred cccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhcc
Confidence 346777888888776432 232233333221 1111122233333333334567777665555667888999999999
Q ss_pred CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCC----
Q 038743 584 GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR---- 659 (839)
Q Consensus 584 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~---- 659 (839)
++|...|+.. ..++.......+..+.+.+.|||.. .+.|+|++|.|+|+..++..+++|||.....+-
T Consensus 889 ~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 889 GDLPSKLHNS-----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred CCchhhhhcC-----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 9999888543 2444444455666788899999984 589999999999999999999999984432210
Q ss_pred -----------------C---------CceeEEeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCCCCC
Q 038743 660 -----------------E---------HSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSG 712 (839)
Q Consensus 660 -----------------~---------~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~~~~ 712 (839)
. .........||+.|.+||.+.+......+|.|++|++++|.++|..||+...
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 0011223569999999999999999999999999999999999999997543
No 456
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.65 E-value=1.8e-07 Score=97.38 Aligned_cols=139 Identities=14% Similarity=0.019 Sum_probs=98.7
Q ss_pred cccCCCceEEEEEeCCCcEEEEEEecccCC-----------cchHHHHHHHHHhhccccCCcc--cccceeec-----CC
Q 038743 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVLP-----------HGEKEFVTEVNTIGSMHHMNLV--RLCGYCSE-----GS 572 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~h~niv--~l~g~~~~-----~~ 572 (839)
+-.-....|++..+ +|+.+.||+...... .....+.+|.+.+.++...+|. +++++... ..
T Consensus 30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 33333345777777 678899997743221 1112478999999888544443 44555543 23
Q ss_pred ceEEEEeeccCC-ChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECC-------CC
Q 038743 573 NRLLVYEFMKNG-SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDE-------NF 644 (839)
Q Consensus 573 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~-------~~ 644 (839)
..+||+|++++. +|.+++... .....+...+..++.+++..++-||+. +|+|+|++++|||++. +.
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~---~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADW---ATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 568999999986 898887321 123345567778999999999999995 9999999999999975 56
Q ss_pred ceeecccCccee
Q 038743 645 CPKVSDFGLAKL 656 (839)
Q Consensus 645 ~~kl~DfGla~~ 656 (839)
.+.|+||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 899999998863
No 457
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.53 E-value=3.3e-06 Score=88.94 Aligned_cols=196 Identities=14% Similarity=0.148 Sum_probs=127.6
Q ss_pred cccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcc-ccCCcccccce----e--ecC-CceEEEE
Q 038743 507 FAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM-HHMNLVRLCGY----C--SEG-SNRLLVY 578 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~----~--~~~-~~~~lv~ 578 (839)
....||+|+-+.+|-.--- +. -+-|+..........+. +..|... .||-+..-+.+ . -++ ...-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 4578999999999954221 12 23466654433222222 2233333 45543321111 0 111 2245666
Q ss_pred eeccCC-ChhhhcccC-CCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 579 EFMKNG-SLDKWIFPS-YHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 579 e~~~~g-sL~~~l~~~-~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
..+.+- ....++... .++.-...+|...++.+..+|.+.+-||++ +.+-+|+.++|+|+.+++.+.|.|-..-.+
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 666553 233333221 222334678999999999999999999996 889999999999999999999988554333
Q ss_pred cCCCCceeEEeeccccceeCccccc-----CCCCCCcccEEehhHHHHHHHhC-CCCCCCCC
Q 038743 657 MGREHSQVVTMVRGTRGYLAPEWVS-----NRPITVKADVYSYGMLLLEIVGG-RRNLDMSG 712 (839)
Q Consensus 657 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DV~S~Gvvl~elltG-~~p~~~~~ 712 (839)
- .........+|...|.+||.-. +..-+...|.|.||+++++++.| ++||.+..
T Consensus 167 ~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~ 226 (637)
T COG4248 167 N--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP 226 (637)
T ss_pred c--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence 2 2233445567899999999654 33456789999999999999987 99997653
No 458
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.49 E-value=1.1e-06 Score=88.40 Aligned_cols=136 Identities=19% Similarity=0.140 Sum_probs=94.8
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEecccC----------------------CcchHHHHHHHHHhhccccC--C
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVL----------------------PHGEKEFVTEVNTIGSMHHM--N 560 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~----------------------~~~~~~~~~E~~~l~~l~h~--n 560 (839)
+.+.++||.|--+.||.|..+.|.++|||.-+--. -.......+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34678999999999999999999999999642100 00112367888999888644 5
Q ss_pred cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 561 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
+.+.+++ +.-.+||||.++-.|... .++....-.|+..|+.-+.-+-. .+|||+|+.+-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~----------r~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRL----------RLDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecc----------cCcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 6665543 456899999998666331 11223333344444444443333 499999999999999
Q ss_pred CCCCceeecccCcceec
Q 038743 641 DENFCPKVSDFGLAKLM 657 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~~ 657 (839)
+++|.+.++||-.+...
T Consensus 236 ~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 236 TEDGDIVVIDWPQAVPI 252 (304)
T ss_pred ecCCCEEEEeCcccccC
Confidence 99999999999876543
No 459
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.41 E-value=7.5e-08 Score=107.67 Aligned_cols=152 Identities=19% Similarity=0.341 Sum_probs=100.8
Q ss_pred HHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCcee--------EEeeccccceeCccccc
Q 038743 610 AIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQV--------VTMVRGTRGYLAPEWVS 681 (839)
Q Consensus 610 ~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--------~~~~~gt~~y~aPE~~~ 681 (839)
+.+++.||.|+|.+ .++||++|.|++|.++..+..||+.|+.+.......... .........|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 44566999999987 799999999999999999999999999886543311111 11123456799999999
Q ss_pred CCCCCCcccEEehhHHHHHHH-hCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhcc
Q 038743 682 NRPITVKADVYSYGMLLLEIV-GGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCI 760 (839)
Q Consensus 682 ~~~~s~~~DV~S~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl 760 (839)
....+.++|+||+|+++|-+. .|+.-++.......+.+.. . ..+.-.......++. ++.+-+.+.+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-----~----~~~~~~~~~s~~~p~----el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-----N----LLNAGAFGYSNNLPS----ELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-----c----ccccccccccccCcH----HHHHHHHHHh
Confidence 988999999999999999999 5555554433222111100 0 000000111122333 3444444568
Q ss_pred ccCCCCCCCHHHHHHH
Q 038743 761 QDEVFMRPSMGEVVKM 776 (839)
Q Consensus 761 ~~~p~~RPt~~~v~~~ 776 (839)
..++..||++.++...
T Consensus 250 ~~~~~~rp~~~~l~~~ 265 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLSI 265 (700)
T ss_pred cCCcccCcchhhhhcc
Confidence 8999999987776543
No 460
>PRK09902 hypothetical protein; Provisional
Probab=98.35 E-value=6.1e-06 Score=81.29 Aligned_cols=138 Identities=19% Similarity=0.189 Sum_probs=102.7
Q ss_pred cccCCCceEEEEEeCCCcEEEEEEecccC------CcchHHHHHHHHHhhccccCC--cccccceeec-----CCceEEE
Q 038743 511 LGTGGFGSVYKGSLGDGTLVAVKKLDRVL------PHGEKEFVTEVNTIGSMHHMN--LVRLCGYCSE-----GSNRLLV 577 (839)
Q Consensus 511 lG~G~fg~Vy~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~-----~~~~~lv 577 (839)
-|+||-+-|++-.+ +|+.+-+|+-.+.. +.+...|.+|...|.++..-+ +.+++ ++.. .-..+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46788889999888 44579999875321 445678999999999985333 44444 3322 1235789
Q ss_pred EeeccC-CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCc--eeecccCcc
Q 038743 578 YEFMKN-GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFC--PKVSDFGLA 654 (839)
Q Consensus 578 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~--~kl~DfGla 654 (839)
+|-+++ -+|.+++.+. .-...+...+..+..+|++.++-||+. ++.|+|+-+.|||++.++. ++++||.-+
T Consensus 104 Te~L~g~~~L~~~l~~~---~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 104 TEDMAGFISIADWYAQH---AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEeCCCCccHHHHHhcC---CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 997764 5888887321 123456777889999999999999995 9999999999999986666 999999877
Q ss_pred ee
Q 038743 655 KL 656 (839)
Q Consensus 655 ~~ 656 (839)
+.
T Consensus 178 r~ 179 (216)
T PRK09902 178 RR 179 (216)
T ss_pred ch
Confidence 63
No 461
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.34 E-value=1.5e-06 Score=87.59 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=82.9
Q ss_pred hHHHHHHHHHhhccccC--CcccccceeecCC----ceEEEEeeccCC-ChhhhcccCCCCCcccCChhhHHHHHHHHHH
Q 038743 543 EKEFVTEVNTIGSMHHM--NLVRLCGYCSEGS----NRLLVYEFMKNG-SLDKWIFPSYHHRDRVLDWTTRFNIAIATAQ 615 (839)
Q Consensus 543 ~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 615 (839)
.....+|...+.++... ..++.+++..... ..++|+|++++. +|.+++... ..++......++.++++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~-----~~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW-----EQLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh-----cccchhhHHHHHHHHHH
Confidence 34678888888887533 3455566655432 358999999984 899988421 12566778889999999
Q ss_pred HhHHhhhccCCeeeecCCCCCcEEECCCC---ceeecccCcceec
Q 038743 616 GIAYFHEQCRNRIIHCDIKPENILLDENF---CPKVSDFGLAKLM 657 (839)
Q Consensus 616 ~L~yLH~~~~~~iiH~dlk~~Nill~~~~---~~kl~DfGla~~~ 657 (839)
.++-||+. +|+|+|+++.|||++.+. .+.++||+.++..
T Consensus 130 ~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 130 LIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999995 999999999999998877 8999999988753
No 462
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.33 E-value=1.6e-06 Score=97.69 Aligned_cols=142 Identities=17% Similarity=0.232 Sum_probs=91.2
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcch------------------------------H----------HHHH
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGE------------------------------K----------EFVT 548 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~------------------------------~----------~~~~ 548 (839)
+.|+.++-|.||+|++++|+.||||+.+....... + ++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 57999999999999999999999999864211100 0 1334
Q ss_pred HHHHhhccc-----cCCcccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhc
Q 038743 549 EVNTIGSMH-----HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQ 623 (839)
Q Consensus 549 E~~~l~~l~-----h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~ 623 (839)
|...+.+++ .+++.-..=|..-.....|+|||++|-.+.+...- +...++. ..++..++++ |+.+-
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l----~~~g~d~---k~ia~~~~~~--f~~q~ 281 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL----KSAGIDR---KELAELLVRA--FLRQL 281 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH----HhcCCCH---HHHHHHHHHH--HHHHH
Confidence 444444431 23322111122234678999999999988887421 1223342 2334333332 11111
Q ss_pred cCCeeeecCCCCCcEEECCCCceeecccCcceecCC
Q 038743 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 624 ~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~ 659 (839)
.+.++.|.|.+|.||+++.++.+.+.|||+...+.+
T Consensus 282 ~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 282 LRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 113899999999999999999999999999987654
No 463
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.21 E-value=1.2e-05 Score=82.14 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=84.9
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCC--cccccceeecCCceEEEEeeccCCC-
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN--LVRLCGYCSEGSNRLLVYEFMKNGS- 585 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~~gs- 585 (839)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 47899999999984 24567788875432 3445788999998886443 4667777777777789999999963
Q ss_pred hhhhcccC-----------------CCCCc-ccCChhhHH-HHHH----------HHHH-HhHHhhhc-cCCeeeecCCC
Q 038743 586 LDKWIFPS-----------------YHHRD-RVLDWTTRF-NIAI----------ATAQ-GIAYFHEQ-CRNRIIHCDIK 634 (839)
Q Consensus 586 L~~~l~~~-----------------~~~~~-~~l~~~~~~-~i~~----------~ia~-~L~yLH~~-~~~~iiH~dlk 634 (839)
+...+... .|.-. .......+. .+.. .+.+ ...+|... ....++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 22111100 01000 000000000 0000 0001 11222211 12457899999
Q ss_pred CCcEEECCCCceeecccCccee
Q 038743 635 PENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 635 ~~Nill~~~~~~kl~DfGla~~ 656 (839)
|.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999998753
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.11 E-value=9.8e-06 Score=91.04 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=90.3
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcc-------------------------------------hHHHHHHHH
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHG-------------------------------------EKEFVTEVN 551 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-------------------------------------~~~~~~E~~ 551 (839)
+.||.-+.|.||+|++++|+.||||+-+...... +-+|..|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 5899999999999999999999999875432111 012444554
Q ss_pred Hhhcc----ccCC------cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhh
Q 038743 552 TIGSM----HHMN------LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621 (839)
Q Consensus 552 ~l~~l----~h~n------iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 621 (839)
-..+. .|-+ |.+++- .-...+.|+||||+|..+.+.-. -....++-.. |+..+.++ |++
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~----i~~~gi~~~~---i~~~l~~~--~~~ 315 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDA----IDKRGISPHD---ILNKLVEA--YLE 315 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHH----HHHcCCCHHH---HHHHHHHH--HHH
Confidence 33332 3444 333322 22357899999999988877531 1223344443 33333332 222
Q ss_pred hccCCeeeecCCCCCcEEECC----CCceeecccCcceecCC
Q 038743 622 EQCRNRIIHCDIKPENILLDE----NFCPKVSDFGLAKLMGR 659 (839)
Q Consensus 622 ~~~~~~iiH~dlk~~Nill~~----~~~~kl~DfGla~~~~~ 659 (839)
.-...|++|+|=+|.||+++. ++.+.+.|||+......
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 211238999999999999983 67899999999986644
No 465
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.06 E-value=3.9e-05 Score=76.63 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=91.2
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEecccCCc-------------------chHH-----HHHHHHHhhccc--cCCccc
Q 038743 510 LLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPH-------------------GEKE-----FVTEVNTIGSMH--HMNLVR 563 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-------------------~~~~-----~~~E~~~l~~l~--h~niv~ 563 (839)
.|..|--+.||+|.-.++..+|||+....... ..++ ..+|..-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 57788889999998888999999998532211 0111 235666666652 334444
Q ss_pred ccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC
Q 038743 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN 643 (839)
Q Consensus 564 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~ 643 (839)
.+++. +-.|||||+....+. .....+..+...+...+..++++.+.-|-.. .++||+||..-|||+. +
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~p-----AP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLP-----APRLKDVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-D 202 (268)
T ss_pred ceeec----CCeEEEEeccCCCCC-----CCCcccCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-C
Confidence 44432 447999998654211 0111222222224566677777777777663 4899999999999999 8
Q ss_pred CceeecccCcceecCC
Q 038743 644 FCPKVSDFGLAKLMGR 659 (839)
Q Consensus 644 ~~~kl~DfGla~~~~~ 659 (839)
+.+.|+|++.|.....
T Consensus 203 ~~p~iID~~QaV~~~h 218 (268)
T COG1718 203 GEPYIIDVSQAVTIDH 218 (268)
T ss_pred CeEEEEECccccccCC
Confidence 8899999999876543
No 466
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.03 E-value=4.1e-05 Score=75.76 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=91.7
Q ss_pred HHHHHHhhccccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHH---------HHHHHHhhccccC---Cccccc
Q 038743 498 RDLQIRTSNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEF---------VTEVNTIGSMHHM---NLVRLC 565 (839)
Q Consensus 498 ~~l~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~---------~~E~~~l~~l~h~---niv~l~ 565 (839)
+++....+...+++-......|.+-.. +|+.+++|.........++.| .+++..+.+++.. ..+.++
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 344455555666777777777877777 678899998765433333222 2334434444322 222222
Q ss_pred ceee-----cCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 566 GYCS-----EGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 566 g~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
.+.. -....+|+|||++|-.|.++. .++. .++..|+++|.-||+. |+.|+|.+|.|+++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~---------~i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv 168 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIE---------DIDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLV 168 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccch---------hcCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEE
Confidence 2222 224557899999998886643 1111 3556788889999996 99999999999999
Q ss_pred CCCCceeecccCccee
Q 038743 641 DENFCPKVSDFGLAKL 656 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~ 656 (839)
++++ +++.||+..+.
T Consensus 169 ~~~~-i~iID~~~k~~ 183 (229)
T PF06176_consen 169 SNNG-IRIIDTQGKRM 183 (229)
T ss_pred ECCc-EEEEECccccc
Confidence 9665 99999987654
No 467
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=98.00 E-value=9e-05 Score=66.49 Aligned_cols=102 Identities=25% Similarity=0.396 Sum_probs=67.8
Q ss_pred cCCCeEEeCCCeEEeeeecCCCCCCcEEEEEEeccCCCCCcEEEee-CCCCCCCCCeEEEEecCCcEEEeC-CCeeEEEe
Q 038743 11 SQDQAWISDNGTFAFGFTPIVNIQDRFQLGIWFNELPGDRTVVWSA-NRNFPVTKDAILELDTTGNLVLND-GDTTIWAS 88 (839)
Q Consensus 11 ~~~~~~vS~~g~F~lGF~~~~~~~~~~~lgIw~~~i~~~~tvVW~A-Nr~~pv~~~~~l~l~~~G~Lvl~~-~~~~vWst 88 (839)
+.++++.+.+|.+.|-|...++ |-| |+. ..++||.. +........+.+.|..+|||||.| .+.+||+|
T Consensus 9 n~~~p~~~~s~~~~L~l~~dGn------Lvl-~~~---~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~S 78 (114)
T PF01453_consen 9 NRNSPLTSSSGNYTLILQSDGN------LVL-YDS---NGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQS 78 (114)
T ss_dssp -TTEEEEECETTEEEEEETTSE------EEE-EET---TTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEES
T ss_pred ccccccccccccccceECCCCe------EEE-EcC---CCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEee
Confidence 4567787766999999976552 444 333 35679999 434443356799999999999998 67789999
Q ss_pred cCCCCceeEEEEec--cccEEEecCCCCceeecccCCC
Q 038743 89 NSSGAGVELATMSE--SGNFILYAPNNQPVWQSFLHPS 124 (839)
Q Consensus 89 ~~~~~~~~~a~Lld--sGNlVl~~~~~~~lWQSFD~PT 124 (839)
.. ....+...+++ .||++ ......+.|.|=+.|+
T Consensus 79 f~-~ptdt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 79 FD-YPTDTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS 114 (114)
T ss_dssp TT-SSS-EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred cC-CCccEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence 43 33445566666 88888 7666788999877663
No 468
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.94 E-value=7.5e-05 Score=77.58 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=85.6
Q ss_pred cccCCC-ceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccc-cCCcccccceeecCCceEEEEeeccCCChhh
Q 038743 511 LGTGGF-GSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMH-HMNLVRLCGYCSEGSNRLLVYEFMKNGSLDK 588 (839)
Q Consensus 511 lG~G~f-g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~gsL~~ 588 (839)
|-.|.. ..||+.... +..+.||+..... ..+..+|++++..+. +--+.+++++....+..++|||+++|.+|..
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 344444 889999774 4788889875432 345778888888873 4445677777766667899999999987764
Q ss_pred hccc---------------CCCC---CcccCCh--hhHHHHHH--------------------HHHHHhHHhhh----cc
Q 038743 589 WIFP---------------SYHH---RDRVLDW--TTRFNIAI--------------------ATAQGIAYFHE----QC 624 (839)
Q Consensus 589 ~l~~---------------~~~~---~~~~l~~--~~~~~i~~--------------------~ia~~L~yLH~----~~ 624 (839)
.... ..+. ....+.. ..++.... .+...+..|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 3210 0000 0001110 00000000 01111122211 11
Q ss_pred CCeeeecCCCCCcEEECCCCceeecccCccee
Q 038743 625 RNRIIHCDIKPENILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 625 ~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~ 656 (839)
...++|+|+.|.|||++++....|+||+.+..
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 35689999999999999987788999997753
No 469
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.94 E-value=6.1e-05 Score=77.49 Aligned_cols=144 Identities=16% Similarity=0.123 Sum_probs=84.9
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccC--Ccccccceeec---CCceEEEEeeccC
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHM--NLVRLCGYCSE---GSNRLLVYEFMKN 583 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~---~~~~~lv~e~~~~ 583 (839)
+.|+.|..+.||+....+ ..+++|..... .....+..|..++..+... .+.+++.+... ....+++|+++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 468899999999999977 68999987543 3456788898888888533 34566664432 3346899999999
Q ss_pred CChhh----------------hc---ccCCCCCcccCChhh---------HHH------------HHHHHHH-HhHHhhh
Q 038743 584 GSLDK----------------WI---FPSYHHRDRVLDWTT---------RFN------------IAIATAQ-GIAYFHE 622 (839)
Q Consensus 584 gsL~~----------------~l---~~~~~~~~~~l~~~~---------~~~------------i~~~ia~-~L~yLH~ 622 (839)
..+.. .| +... .....+.+.. ... ....+.+ .+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVP-PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSH-TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhccccc-ccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 88877 11 1110 0001111100 000 0112222 3334443
Q ss_pred c----cCCeeeecCCCCCcEEEC-CCCceeecccCccee
Q 038743 623 Q----CRNRIIHCDIKPENILLD-ENFCPKVSDFGLAKL 656 (839)
Q Consensus 623 ~----~~~~iiH~dlk~~Nill~-~~~~~kl~DfGla~~ 656 (839)
. ....++|+|+.|.|||++ +++.+.|.||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1 246799999999999999 666668999998753
No 470
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.93 E-value=3.6e-06 Score=93.27 Aligned_cols=183 Identities=17% Similarity=0.100 Sum_probs=133.2
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCC-cccccceeecCCceEEEEeeccCC-C
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN-LVRLCGYCSEGSNRLLVYEFMKNG-S 585 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lv~e~~~~g-s 585 (839)
-+-+++|++++++|.+-...+.+.++.+.. ..+..-++++|.+.+||| .++.++-+..+....++++++..+ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 356788999999988764444444554432 245677889999999999 777777778888889999999877 3
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCCCceeecccCcceecCCCCceeE
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSQVV 665 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 665 (839)
-...+. .....+...+...+...-+++|+|||+. .=+|+| ||+..+ ...|..||+....+.+.. ..
T Consensus 322 ~~~~~~----~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~ 387 (829)
T KOG0576|consen 322 SALEMT----VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KP 387 (829)
T ss_pred ccccCC----hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc--cc
Confidence 222111 1223444455556667778899999984 348888 777665 678999999988765543 23
Q ss_pred EeeccccceeCcccccCCCCCCcccEEehhHHHHHHHhCCCCCC
Q 038743 666 TMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLD 709 (839)
Q Consensus 666 ~~~~gt~~y~aPE~~~~~~~s~~~DV~S~Gvvl~elltG~~p~~ 709 (839)
....+++.++|||......+..+.|+|++|+-..++--|-+|-.
T Consensus 388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 44568999999999999999999999999987777776666643
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.90 E-value=3.3e-05 Score=76.15 Aligned_cols=104 Identities=20% Similarity=0.263 Sum_probs=81.1
Q ss_pred HHHHHhhcccc-CCcccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCC
Q 038743 548 TEVNTIGSMHH-MNLVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRN 626 (839)
Q Consensus 548 ~E~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 626 (839)
.|.-+++.+++ +++++++|+|- .++|.||...+++...-.. -..-...+|..|.+||.++++.+.+|++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~--l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP--LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc--cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57778888865 69999999993 4789999987765321000 00112468999999999999999999985545
Q ss_pred eeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 627 RIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 627 ~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
.+.-.|++++|+-+++++.+|+.|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6788999999999999999999999877543
No 472
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=97.88 E-value=1.6e-05 Score=71.59 Aligned_cols=53 Identities=28% Similarity=0.561 Sum_probs=42.3
Q ss_pred EEEEecCCcEEEeCCC--eeEEEecCCCC--ceeEEEEeccccEEEecCCCCceeec
Q 038743 67 ILELDTTGNLVLNDGD--TTIWASNSSGA--GVELATMSESGNFILYAPNNQPVWQS 119 (839)
Q Consensus 67 ~l~l~~~G~Lvl~~~~--~~vWst~~~~~--~~~~a~LldsGNlVl~~~~~~~lWQS 119 (839)
.+.+..+|+||+.+.. .+||++++... ....+.|.++|||||++.++.++|||
T Consensus 23 ~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S 79 (114)
T smart00108 23 TLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSS 79 (114)
T ss_pred ccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEe
Confidence 3455688999999853 68999997422 22568999999999999989999998
No 473
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=97.84 E-value=1.9e-05 Score=71.42 Aligned_cols=53 Identities=28% Similarity=0.564 Sum_probs=42.0
Q ss_pred EEEec-CCcEEEeCC--CeeEEEecCCC--CceeEEEEeccccEEEecCCCCceeecc
Q 038743 68 LELDT-TGNLVLNDG--DTTIWASNSSG--AGVELATMSESGNFILYAPNNQPVWQSF 120 (839)
Q Consensus 68 l~l~~-~G~Lvl~~~--~~~vWst~~~~--~~~~~a~LldsGNlVl~~~~~~~lWQSF 120 (839)
+.+.. +|+||+.+. ..+||++|+.. .....+.|.++|||||++.++.++|||=
T Consensus 24 ~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~ 81 (116)
T cd00028 24 LIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSN 81 (116)
T ss_pred CCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEec
Confidence 34455 899999874 36899999743 3444689999999999999999999974
No 474
>PLN02876 acyl-CoA dehydrogenase
Probab=97.72 E-value=0.0003 Score=86.05 Aligned_cols=79 Identities=11% Similarity=0.300 Sum_probs=58.0
Q ss_pred ccccccCCCceEEEEEeCCC---cEEEEEEecccC-CcchHHHHHHHHHhhccc-cCCc--ccccceeecC---CceEEE
Q 038743 508 AQLLGTGGFGSVYKGSLGDG---TLVAVKKLDRVL-PHGEKEFVTEVNTIGSMH-HMNL--VRLCGYCSEG---SNRLLV 577 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~g~~~~~---~~~~lv 577 (839)
.+.|+.|.+..+|+....++ ..+++|+..... ......+.+|.+++..+. |.++ .+++++|.+. ...++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35789999999999887654 467788764321 223456889999999995 6665 7778888764 467899
Q ss_pred EeeccCCCh
Q 038743 578 YEFMKNGSL 586 (839)
Q Consensus 578 ~e~~~~gsL 586 (839)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999998654
No 475
>smart00473 PAN_AP divergent subfamily of APPLE domains. Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.
Probab=97.59 E-value=0.00021 Score=59.25 Aligned_cols=58 Identities=22% Similarity=0.424 Sum_probs=39.6
Q ss_pred ceeeeecccccCCccceeccccCCcChHHHHHhhcC-CCceeEEEeecCCCCCeEEEee-eccCCC
Q 038743 345 RIASVQQTNYYFPEYSVIANYSDIATVSKCGDACLS-NCQCVASVYGLDDEKPYCWVLR-SLDFGG 408 (839)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~-nCsC~A~~y~~~~~~~~C~~~~-~~~~~g 408 (839)
.|..++++.++ +..... ....++++|++.|++ +|+|.||+|.. ++..|++|. ..+.+.
T Consensus 5 ~f~~~~~~~l~--~~~~~~--~~~~s~~~C~~~C~~~~~~C~s~~y~~--~~~~C~l~~~~~~~~~ 64 (78)
T smart00473 5 CFVRLPNTKLP--GFSRIV--ISVASLEECASKCLNSNCSCRSFTYNN--GTKGCLLWSESSLGDA 64 (78)
T ss_pred eeEEecCccCC--CCccee--EcCCCHHHHHHHhCCCCCceEEEEEcC--CCCEEEEeeCCccccc
Confidence 45566666654 222111 123589999999999 99999999973 678999887 444333
No 476
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.55 E-value=0.0008 Score=66.62 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=88.8
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccC----------------CcchHHHHHHHHHhhccc------cCCcccccc
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVL----------------PHGEKEFVTEVNTIGSMH------HMNLVRLCG 566 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l~g 566 (839)
..||+|+.-.|| .++++....||++.... ....++..+|+.....+. +..|.+++|
T Consensus 7 ~~i~~G~~R~cy--~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 7 DLIAQGGERDCY--QHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred cccccCCCceEE--ECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 579999999988 45667778889886543 122456777777666665 889999999
Q ss_pred eeecCCceEEEEeeccC------CChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 567 YCSEGSNRLLVYEFMKN------GSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 567 ~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
+.......-+|+|.+.+ -+|.+++. ...++. . +...+-+-..||-+ ..|+.+|++|.||++
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~------~~~~~~-~---~~~~L~~f~~~l~~---~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLK------EGGLTE-E---LRQALDEFKRYLLD---HHIVIRDLNPHNIVV 151 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHH------cCCccH-H---HHHHHHHHHHHHHH---cCCeecCCCcccEEE
Confidence 99999999999998753 35666662 223333 2 23333344456665 389999999999999
Q ss_pred CCC---C-ceeecc
Q 038743 641 DEN---F-CPKVSD 650 (839)
Q Consensus 641 ~~~---~-~~kl~D 650 (839)
..+ . .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 532 2 467777
No 477
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.55 E-value=0.00058 Score=70.43 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=45.0
Q ss_pred cccccCCCc-eEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccC---CcccccceeecC---CceEEEEeec
Q 038743 509 QLLGTGGFG-SVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHM---NLVRLCGYCSEG---SNRLLVYEFM 581 (839)
Q Consensus 509 ~~lG~G~fg-~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~---~~~~lv~e~~ 581 (839)
+.|+.|+.. .||+. +..+++|..+. ......+.+|.+++..+... -+.++++..... ...+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 356766665 58875 23467776543 22345788899988877421 234444433322 2348899999
Q ss_pred cCCChhh
Q 038743 582 KNGSLDK 588 (839)
Q Consensus 582 ~~gsL~~ 588 (839)
+|.++.+
T Consensus 77 ~G~~l~~ 83 (235)
T cd05155 77 EGETATA 83 (235)
T ss_pred cCCCCCc
Confidence 9977754
No 478
>PRK10593 hypothetical protein; Provisional
Probab=97.52 E-value=0.0013 Score=70.28 Aligned_cols=76 Identities=8% Similarity=0.095 Sum_probs=56.2
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcccc---CCcccccceeecC---CceEEEEeec
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHH---MNLVRLCGYCSEG---SNRLLVYEFM 581 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~---~~~~lv~e~~ 581 (839)
.+.||.|..+.||+....+++ +++|..+.. .....+..|.+.++.+.. ..+.+++++|..+ +..+||||++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i 95 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL 95 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence 457999999999999876664 666764321 123478899999888842 4677888877543 5689999999
Q ss_pred cCCCh
Q 038743 582 KNGSL 586 (839)
Q Consensus 582 ~~gsL 586 (839)
+++++
T Consensus 96 ~G~~~ 100 (297)
T PRK10593 96 RGVSV 100 (297)
T ss_pred CCEec
Confidence 98765
No 479
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.52 E-value=0.00065 Score=71.08 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=79.7
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCc-ccccceeecCCceEEEEeeccCCChhh
Q 038743 510 LLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNL-VRLCGYCSEGSNRLLVYEFMKNGSLDK 588 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~gsL~~ 588 (839)
.+..|-...+|+... +++.+++|........-.....+|.+++..+....+ .++++... ..+||||++|..+..
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 456788889999884 567888887643322211235778888888854433 33443332 368999999877643
Q ss_pred h-----------------cccCCCCCcccCChhhHH-HHHHH---------HHHHhHHhhhc-----cCCeeeecCCCCC
Q 038743 589 W-----------------IFPSYHHRDRVLDWTTRF-NIAIA---------TAQGIAYFHEQ-----CRNRIIHCDIKPE 636 (839)
Q Consensus 589 ~-----------------l~~~~~~~~~~l~~~~~~-~i~~~---------ia~~L~yLH~~-----~~~~iiH~dlk~~ 636 (839)
- |+.. ......++...+. ....+ +...+..+... ....++|+|+.|.
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQ-PRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 2 1111 0011122221111 11101 11112222111 1246899999999
Q ss_pred cEEECCCCceeecccCccee
Q 038743 637 NILLDENFCPKVSDFGLAKL 656 (839)
Q Consensus 637 Nill~~~~~~kl~DfGla~~ 656 (839)
||++++++ ++|+||..+..
T Consensus 157 Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cEEEeCCC-CEEEeccccCc
Confidence 99999877 78999998754
No 480
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.50 E-value=0.00095 Score=73.33 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=53.3
Q ss_pred cccccCCCceEEEEEeCCC-cEEEEEEecccC-------CcchHHHHHHHHHhhccc---cCCcccccceeecCCceEEE
Q 038743 509 QLLGTGGFGSVYKGSLGDG-TLVAVKKLDRVL-------PHGEKEFVTEVNTIGSMH---HMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~-~~vavK~l~~~~-------~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv 577 (839)
+.||.|.+..||++...+| +.|+||.-.... +.....+..|.+.|..+. ...+++++.+ +....++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5799999999999998877 589999853211 123456677888777762 2356666655 44668899
Q ss_pred EeeccCCC
Q 038743 578 YEFMKNGS 585 (839)
Q Consensus 578 ~e~~~~gs 585 (839)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 481
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.45 E-value=0.00091 Score=68.94 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=48.6
Q ss_pred cccccCCCceEEEEEeCC--CcEEEEEEecccCCcchHHHHHHHHHhhccccCCc-ccccceeecCCceEEEEeeccCCC
Q 038743 509 QLLGTGGFGSVYKGSLGD--GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNL-VRLCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~~~~gs 585 (839)
+.|..|-...+|+....+ ++.+++|+..... .......+|+.++..+...++ +++++... ..++|||+++.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-ELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-cceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 457788888999998764 6789999765432 112234578888888854444 34443332 247999999877
Q ss_pred hh
Q 038743 586 LD 587 (839)
Q Consensus 586 L~ 587 (839)
+.
T Consensus 79 l~ 80 (235)
T cd05157 79 LE 80 (235)
T ss_pred CC
Confidence 64
No 482
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.45 E-value=0.001 Score=65.25 Aligned_cols=125 Identities=25% Similarity=0.382 Sum_probs=88.5
Q ss_pred HhhccccccccCCC-ceEEEEEeCCCcEEEEEEecccC-----------C----------cchHHHHHHHHHhhccc---
Q 038743 503 RTSNFAQLLGTGGF-GSVYKGSLGDGTLVAVKKLDRVL-----------P----------HGEKEFVTEVNTIGSMH--- 557 (839)
Q Consensus 503 ~~~~~~~~lG~G~f-g~Vy~~~~~~~~~vavK~l~~~~-----------~----------~~~~~~~~E~~~l~~l~--- 557 (839)
+..+|.+.||.|.- |.||++++ +|+.+|+|.+.... . .-...|..|.+.+++|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 66788899999999 99999999 67899999942110 0 01124889999999884
Q ss_pred cCCc--ccccceeecC------------------CceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHh
Q 038743 558 HMNL--VRLCGYCSEG------------------SNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGI 617 (839)
Q Consensus 558 h~ni--v~l~g~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L 617 (839)
+..+ |+.+||..-. ..+.||.||++... ....+-+.+|.+-|
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------------~~~~~~~~~~~~dl 177 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------------PLQIRDIPQMLRDL 177 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------------ccchhHHHHHHHHH
Confidence 4456 8888887211 12356777665422 11223456677778
Q ss_pred HHhhhccCCeeeecCCCCCcEEECCCCceeecccCcc
Q 038743 618 AYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLA 654 (839)
Q Consensus 618 ~yLH~~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla 654 (839)
..+|.. +|+-+|+++.|.. .-||+|||.+
T Consensus 178 ~~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 178 KILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 888884 9999999999986 4589999854
No 483
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.42 E-value=0.00071 Score=64.05 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=84.6
Q ss_pred cccccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCCccc-ccceeecCCceEEEEeeccCCC
Q 038743 507 FAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLVR-LCGYCSEGSNRLLVYEFMKNGS 585 (839)
Q Consensus 507 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~g~~~~~~~~~lv~e~~~~gs 585 (839)
..+.|++|.+|.||+|.+ .|..+|+|+-... .....+..|++++..+.-.++.+ ++.| +.-.+.|||..|-.
T Consensus 26 v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~ 98 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhhcccccEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcc
Confidence 356899999999999999 4558899987543 33567899999999887665543 3333 22244599999888
Q ss_pred hhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCC-CCcEEECCCCceeecccCcceec
Q 038743 586 LDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIK-PENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 586 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk-~~Nill~~~~~~kl~DfGla~~~ 657 (839)
|.+.-.. .+- +-...+++. +|.-+. .+|-|+.|. |...+|-.+..+.|+||.-|+.-
T Consensus 99 L~~~~~~--------~~r----k~l~~vlE~-a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 99 LGKLEIG--------GDR----KHLLRVLEK-AYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hhhhhhc--------ccH----HHHHHHHHH-HHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 8664411 011 223344444 343332 488888876 44444444448999999998743
No 484
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.14 E-value=0.0026 Score=68.18 Aligned_cols=143 Identities=15% Similarity=0.153 Sum_probs=85.3
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCC--ccccccee------ecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN--LVRLCGYC------SEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~------~~~~~~~lv~e~ 580 (839)
+.|..|....+|+....+ ..+++|+... ....+...|++++..+.+.. +++++... ...+..++|++|
T Consensus 20 ~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 20 EGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred ecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 467778888999987644 4688898754 23445667888777774332 44444321 223456899999
Q ss_pred ccCCChhhh--------------cccCC---CC---CcccCChhhHH----------HHHHHHHHHhHHhhh----ccCC
Q 038743 581 MKNGSLDKW--------------IFPSY---HH---RDRVLDWTTRF----------NIAIATAQGIAYFHE----QCRN 626 (839)
Q Consensus 581 ~~~gsL~~~--------------l~~~~---~~---~~~~l~~~~~~----------~i~~~ia~~L~yLH~----~~~~ 626 (839)
++|..+... |+... .. ......|.... .....+..++.++.. ....
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 999776431 11100 00 00111222211 011123334444443 1234
Q ss_pred eeeecCCCCCcEEECCCCceeecccCcce
Q 038743 627 RIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 627 ~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
.++|+|+.|.|||++++..+.|.||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 69999999999999998778899999875
No 485
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=97.01 E-value=0.00087 Score=54.84 Aligned_cols=34 Identities=24% Similarity=0.590 Sum_probs=28.7
Q ss_pred cChHHHHHhhcCCCceeEEEeecCCCCCeEEEeeec
Q 038743 369 ATVSKCGDACLSNCQCVASVYGLDDEKPYCWVLRSL 404 (839)
Q Consensus 369 ~~~~~C~~~Cl~nCsC~A~~y~~~~~~~~C~~~~~~ 404 (839)
.+.++|++.|+.||+|.||.|. .....|+++...
T Consensus 25 ~s~~~Cq~~C~~~~~C~afT~~--~~~~~C~lk~~~ 58 (73)
T cd01100 25 SSAEQCQAACTADPGCLAFTYN--TKSKKCFLKSSE 58 (73)
T ss_pred CCHHHHHHHcCCCCCceEEEEE--CCCCeEEcccCC
Confidence 4789999999999999999997 446889976553
No 486
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.00 E-value=0.0069 Score=65.21 Aligned_cols=144 Identities=15% Similarity=0.177 Sum_probs=82.5
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccC--Cccccccee------ecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHM--NLVRLCGYC------SEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~------~~~~~~~lv~e~ 580 (839)
+.++.|....+|+....++ .+++|+.... ....+...|++++..|... .+.+++... ...+..++++||
T Consensus 28 ~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVG-RYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred cccCCccccceEEEEeCCC-cEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 4677787789999876555 5778876542 1234455667777666322 234444322 123456899999
Q ss_pred ccCCChhhh--------------cccCCC---CC----cccCChhhHH------------HHHHHHHHHhHHhhh----c
Q 038743 581 MKNGSLDKW--------------IFPSYH---HR----DRVLDWTTRF------------NIAIATAQGIAYFHE----Q 623 (839)
Q Consensus 581 ~~~gsL~~~--------------l~~~~~---~~----~~~l~~~~~~------------~i~~~ia~~L~yLH~----~ 623 (839)
++|..+... |+.... .. ...-.|.... .....+.+.+++|.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 998654311 111000 00 0011121111 011123344555542 2
Q ss_pred cCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 624 CRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 624 ~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
...+++|+|+++.||+++.++...|.||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 34689999999999999988877899999874
No 487
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.99 E-value=0.004 Score=66.93 Aligned_cols=143 Identities=20% Similarity=0.182 Sum_probs=83.5
Q ss_pred cccccCCCceEEEEEeCC-------CcEEEEEEecccCCcchHHHHHHHHHhhccccCCc-ccccceeecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGD-------GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNL-VRLCGYCSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lv~e~ 580 (839)
+.|..|-...+|+....+ ++.+++|+..... .......+|.+++..+....+ .++++++.. .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 345667777899988765 5789999875432 223456778888887753333 345555432 358999
Q ss_pred ccCCChhhh-c----------------ccCCCCC-cc---cCC--hhhHHH--------------------------HHH
Q 038743 581 MKNGSLDKW-I----------------FPSYHHR-DR---VLD--WTTRFN--------------------------IAI 611 (839)
Q Consensus 581 ~~~gsL~~~-l----------------~~~~~~~-~~---~l~--~~~~~~--------------------------i~~ 611 (839)
++|..+... + +...... .. ... |..+.. +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 998776542 1 1111110 00 000 111100 111
Q ss_pred HHHHHhHHhhh------ccCCeeeecCCCCCcEEECCC----CceeecccCccee
Q 038743 612 ATAQGIAYFHE------QCRNRIIHCDIKPENILLDEN----FCPKVSDFGLAKL 656 (839)
Q Consensus 612 ~ia~~L~yLH~------~~~~~iiH~dlk~~Nill~~~----~~~kl~DfGla~~ 656 (839)
.+.+.+..|.. .....++|+|+.+.|||++++ +.++|+||..+..
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 22223334432 134578999999999999985 7899999998753
No 488
>PRK05231 homoserine kinase; Provisional
Probab=96.90 E-value=0.0083 Score=64.98 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=77.3
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCC--cccccce------eecCCceEEEEee
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN--LVRLCGY------CSEGSNRLLVYEF 580 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~------~~~~~~~~lv~e~ 580 (839)
+.|+.|....+|+.+..+| .+++|+... ....+...|+.++..|...+ +.+.+.. ....+..++++||
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 3567788889999987555 688898752 12233444555555553222 2233321 1224457899999
Q ss_pred ccCCChhhh--------------cccCCCC------CcccCCh-hhHHHH------------H-HHHHHHhHHhhh----
Q 038743 581 MKNGSLDKW--------------IFPSYHH------RDRVLDW-TTRFNI------------A-IATAQGIAYFHE---- 622 (839)
Q Consensus 581 ~~~gsL~~~--------------l~~~~~~------~~~~l~~-~~~~~i------------~-~~ia~~L~yLH~---- 622 (839)
++|..+... |+..... ....+.| .....- . ..+...+..+..
T Consensus 104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 183 (319)
T PRK05231 104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP 183 (319)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence 998754321 1111000 0011111 111111 1 111112233321
Q ss_pred ccCCeeeecCCCCCcEEECCCCceeecccCcce
Q 038743 623 QCRNRIIHCDIKPENILLDENFCPKVSDFGLAK 655 (839)
Q Consensus 623 ~~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~ 655 (839)
....++||+|++|.|||++.+...-|+||+.+.
T Consensus 184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 124589999999999999977666899999875
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.69 E-value=0.012 Score=62.16 Aligned_cols=72 Identities=18% Similarity=0.352 Sum_probs=47.0
Q ss_pred cccccCCCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhcc---ccCCcccccceeecCCceEEEEeeccCC
Q 038743 509 QLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSM---HHMNLVRLCGYCSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 509 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~g 584 (839)
+.|+.|....+|+.+ .+++.+.||.-.. .....|..|..-|+.| .--.+++++++....+..+||+||++.+
T Consensus 23 ~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 23 EPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred EecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 478889999999988 5788899998752 2334578888877777 3446778888887777789999999876
No 490
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.46 E-value=0.029 Score=59.20 Aligned_cols=31 Identities=32% Similarity=0.561 Sum_probs=26.0
Q ss_pred CeeeecCCCCCcEEECCCCc-eeecccCccee
Q 038743 626 NRIIHCDIKPENILLDENFC-PKVSDFGLAKL 656 (839)
Q Consensus 626 ~~iiH~dlk~~Nill~~~~~-~kl~DfGla~~ 656 (839)
..++|+|+++.|||+++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997555 46999998865
No 491
>PLN02236 choline kinase
Probab=96.39 E-value=0.024 Score=61.83 Aligned_cols=142 Identities=20% Similarity=0.181 Sum_probs=80.3
Q ss_pred ccccCCCceEEEEEeCC-----CcEEEEEEecccCCcchHHHHHHHHHhhccccCCcc-cccceeecCCceEEEEeeccC
Q 038743 510 LLGTGGFGSVYKGSLGD-----GTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMNLV-RLCGYCSEGSNRLLVYEFMKN 583 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lv~e~~~~ 583 (839)
.|-.|-.-.+|+....+ ++.|++|+...... ..-.-..|..++..+...++. ++++.+..+ .|.||+++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~-~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g 117 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE-LFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA 117 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC-eeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence 44457778899987543 36789998755432 222346788888888554443 455655433 58999987
Q ss_pred CChhhh-----------------cccCCCCCcc-cCChhhHHHHHHH-----------------HHHHhHHh----hh-c
Q 038743 584 GSLDKW-----------------IFPSYHHRDR-VLDWTTRFNIAIA-----------------TAQGIAYF----HE-Q 623 (839)
Q Consensus 584 gsL~~~-----------------l~~~~~~~~~-~l~~~~~~~i~~~-----------------ia~~L~yL----H~-~ 623 (839)
.+|... +|+....... ..-|.++.++..+ +...+..| .. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 776422 1111000001 1112222222111 11112222 21 2
Q ss_pred cCCeeeecCCCCCcEEECC-CCceeecccCccee
Q 038743 624 CRNRIIHCDIKPENILLDE-NFCPKVSDFGLAKL 656 (839)
Q Consensus 624 ~~~~iiH~dlk~~Nill~~-~~~~kl~DfGla~~ 656 (839)
....++|+|+++.|||+++ ++.++|+||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 2347899999999999986 47899999988753
No 492
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.34 E-value=0.0042 Score=74.43 Aligned_cols=197 Identities=18% Similarity=0.173 Sum_probs=127.9
Q ss_pred HHHHHHHhhccccCCcccccceeecCCceE----EEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhh
Q 038743 546 FVTEVNTIGSMHHMNLVRLCGYCSEGSNRL----LVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFH 621 (839)
Q Consensus 546 ~~~E~~~l~~l~h~niv~l~g~~~~~~~~~----lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 621 (839)
...|+..+..+.|+|++.++.|..+....- +..|++..-++...+ ..-..++..+.+.+..++..||+|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~-----q~v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL-----QSVGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH-----hhccccCHHHHHHHHHHHhhhHHHHH
Confidence 345777788889999999999876654433 234667776776666 23456777888889999999999999
Q ss_pred hccCCeeeecCCCCC---cEEECCCCceeec--ccCcceecCCCCceeEEeeccccceeCcccccCCCCC--CcccEEeh
Q 038743 622 EQCRNRIIHCDIKPE---NILLDENFCPKVS--DFGLAKLMGREHSQVVTMVRGTRGYLAPEWVSNRPIT--VKADVYSY 694 (839)
Q Consensus 622 ~~~~~~iiH~dlk~~---Nill~~~~~~kl~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s--~~~DV~S~ 694 (839)
+. ...|.-|..+ +...+.++...++ ||+..+.+........ ..-+..+.+||......+. ...|+|.+
T Consensus 304 ~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~--~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 304 SL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS--DLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred Hh---ccceeEEecccccccccCccceeecchhhhcccccCCCcccchh--hcCccccccccccccccchhhhhhHHHHH
Confidence 95 4444444444 4444566667776 8888876543222211 1123456788877665544 44799999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCccchhhhhhhhccCcccccccccccCCCCHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 038743 695 GMLLLEIVGGRRNLDMSGDAEDFFYPGWAFKEMTNGTPLKVADRRLEGAVEEEELMRAMKVAFWCIQDEVFMRPSMGEVV 774 (839)
Q Consensus 695 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~Cl~~~p~~RPt~~~v~ 774 (839)
|..+..+..|..+-..... +..+++. .... .+......|+..++++|++..+++
T Consensus 379 gll~~~~~~~~~i~~~~~~------------------~~~~l~~-----~~~~---~~~d~~~~~~~~~~~~Rl~~~~ll 432 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSAV------------------PVSLLDV-----LSTS---ELLDALPKCLDEDSEERLSALELL 432 (1351)
T ss_pred HHHHhhhhhcCcccccccc------------------hhhhhcc-----ccch---hhhhhhhhhcchhhhhccchhhhh
Confidence 9999999988754321110 0011111 1111 344555669999999999999998
Q ss_pred HHhc
Q 038743 775 KMLE 778 (839)
Q Consensus 775 ~~L~ 778 (839)
...-
T Consensus 433 ~~~f 436 (1351)
T KOG1035|consen 433 THPF 436 (1351)
T ss_pred hchh
Confidence 7653
No 493
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.34 E-value=0.0056 Score=63.51 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=89.1
Q ss_pred hccccccccCCCceEEEEEeCCCcEEEEEEeccc--C-------C-------------cchHHHHHHHHHhhccc-cC-C
Q 038743 505 SNFAQLLGTGGFGSVYKGSLGDGTLVAVKKLDRV--L-------P-------------HGEKEFVTEVNTIGSMH-HM-N 560 (839)
Q Consensus 505 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~-------~-------------~~~~~~~~E~~~l~~l~-h~-n 560 (839)
+.+.++||-|--+.||.+...+|++.++|.-.-- + + -..-...+|...|..|. |- -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999853210 0 0 01123456777887774 22 2
Q ss_pred cccccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEE
Q 038743 561 LVRLCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILL 640 (839)
Q Consensus 561 iv~l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill 640 (839)
+.+.+++ ...++|||++.+-.|...- ...+..++..-+ ..-+.-|.. .++||+|..--||++
T Consensus 174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~--------~v~d~~~ly~~l---m~~Iv~la~---~GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 174 VPKPIDH----NRHCVVMELVDGYPLRQVR--------HVEDPPTLYDDL---MGLIVRLAN---HGLIHGDFNEFNIMV 235 (465)
T ss_pred CCCcccc----cceeeHHHhhcccceeeee--------ecCChHHHHHHH---HHHHHHHHH---cCceecccchheeEE
Confidence 3344433 4558899999888875432 122333333322 223334444 499999999999999
Q ss_pred CCCCceeecccCccee
Q 038743 641 DENFCPKVSDFGLAKL 656 (839)
Q Consensus 641 ~~~~~~kl~DfGla~~ 656 (839)
+++..++++||-....
T Consensus 236 ~dd~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQMVS 251 (465)
T ss_pred ecCCCEEEeechHhhc
Confidence 9999999999975543
No 494
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.28 E-value=0.046 Score=58.12 Aligned_cols=143 Identities=17% Similarity=0.259 Sum_probs=79.8
Q ss_pred cCCCceEEEEEeCCCcEEEEEEecc--cCCcchHHHHHHHHHhhcccc--CCcccccceeecCC--ceEEEEeeccCCCh
Q 038743 513 TGGFGSVYKGSLGDGTLVAVKKLDR--VLPHGEKEFVTEVNTIGSMHH--MNLVRLCGYCSEGS--NRLLVYEFMKNGSL 586 (839)
Q Consensus 513 ~G~fg~Vy~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~--~~~lv~e~~~~gsL 586 (839)
.|..-.+|+.... +++++++ ... ..........+|.++|+.+.- .-+.+.++.|.++. ..+.||+|++|..+
T Consensus 35 ~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~ 112 (321)
T COG3173 35 GGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV 112 (321)
T ss_pred CCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence 3433344444432 7778888 321 112233455677777777632 33455677787766 77999999998544
Q ss_pred hhhcccCCCC---------------------------------CcccCChhhHHHHHH--------HHHHHhHHhhhc--
Q 038743 587 DKWIFPSYHH---------------------------------RDRVLDWTTRFNIAI--------ATAQGIAYFHEQ-- 623 (839)
Q Consensus 587 ~~~l~~~~~~---------------------------------~~~~l~~~~~~~i~~--------~ia~~L~yLH~~-- 623 (839)
.+.+...... .++.-.|...++.+. ....-..+|++.
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p 192 (321)
T COG3173 113 WSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRP 192 (321)
T ss_pred cCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCC
Confidence 4333211000 000011111111000 011223344432
Q ss_pred ---cCCeeeecCCCCCcEEECCCCceeecccCcceec
Q 038743 624 ---CRNRIIHCDIKPENILLDENFCPKVSDFGLAKLM 657 (839)
Q Consensus 624 ---~~~~iiH~dlk~~Nill~~~~~~kl~DfGla~~~ 657 (839)
....++|+|+++.|++|+...-+-|.||+++.+-
T Consensus 193 ~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 193 PWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred CcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 1356999999999999998888999999999764
No 495
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.94 E-value=0.075 Score=58.40 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=53.1
Q ss_pred ccccccCCCceEEEEEeCCCcEEEEEEecccCC-------cchHHHHHHHHHhhccc---cCCcccccceeecCCceEEE
Q 038743 508 AQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLP-------HGEKEFVTEVNTIGSMH---HMNLVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lv 577 (839)
.+.||-|....||+...+ +..++||+-..... .....-..|.+.|..+. ...+++++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 357899999999998864 56799998642111 13334445566665553 347778888777 456889
Q ss_pred EeeccC--CChhhhc
Q 038743 578 YEFMKN--GSLDKWI 590 (839)
Q Consensus 578 ~e~~~~--gsL~~~l 590 (839)
|||+++ ..|.+-|
T Consensus 114 ME~L~~~~~ilr~~L 128 (418)
T PLN02756 114 MRYLEPPHIILRKGL 128 (418)
T ss_pred EeecCCcceehhhhh
Confidence 999977 3455544
No 496
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.77 E-value=0.058 Score=58.18 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=50.1
Q ss_pred ccccCCCceEEEEEeCCC-cEEEEEEecccC-------CcchHHHHHHHHHhhccc--cCC-cccccceeecCCceEEEE
Q 038743 510 LLGTGGFGSVYKGSLGDG-TLVAVKKLDRVL-------PHGEKEFVTEVNTIGSMH--HMN-LVRLCGYCSEGSNRLLVY 578 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~~-~~vavK~l~~~~-------~~~~~~~~~E~~~l~~l~--h~n-iv~l~g~~~~~~~~~lv~ 578 (839)
.||-|....||++..++| +.|+||.-.... +-...+..-|.+.|.... .|. +++++ +.+.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence 579999999999998765 589999763211 223345556777766552 343 34443 34556677999
Q ss_pred eeccC-CChhhhc
Q 038743 579 EFMKN-GSLDKWI 590 (839)
Q Consensus 579 e~~~~-gsL~~~l 590 (839)
|+++. ..|++.|
T Consensus 80 EdL~~~~ilR~~L 92 (370)
T TIGR01767 80 EDLSHHKIARKGL 92 (370)
T ss_pred hhCccchHHHHHH
Confidence 99855 3344444
No 497
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.54 E-value=0.083 Score=56.09 Aligned_cols=139 Identities=18% Similarity=0.231 Sum_probs=94.6
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEecccC---------Ccch------------H-----HHHHHHHHhhccccCCccc
Q 038743 510 LLGTGGFGSVYKGSLGDGTLVAVKKLDRVL---------PHGE------------K-----EFVTEVNTIGSMHHMNLVR 563 (839)
Q Consensus 510 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~---------~~~~------------~-----~~~~E~~~l~~l~h~niv~ 563 (839)
.|..|--+.||.+.-.+|..+|||+.+... -.++ + -...|++-|.+|+.-.|..
T Consensus 151 CiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~ 230 (520)
T KOG2270|consen 151 CISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC 230 (520)
T ss_pred ccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 688899999999999999999999874211 0000 0 1345777777775544432
Q ss_pred ccceeecCCceEEEEeeccCCChhhhcccCCCCCcccCChhhHHHHHHHHHHHhHHhhhccCCeeeecCCCCCcEEECCC
Q 038743 564 LCGYCSEGSNRLLVYEFMKNGSLDKWIFPSYHHRDRVLDWTTRFNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDEN 643 (839)
Q Consensus 564 l~g~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk~~Nill~~~ 643 (839)
.--.. -..-.|||+|+..-... ........++......+-.+++.-|.-|-+.| ++||.||.--|+|+.+
T Consensus 231 PePIl--Lk~hVLVM~FlGrdgw~-----aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyhd- 300 (520)
T KOG2270|consen 231 PEPIL--LKNHVLVMEFLGRDGWA-----APKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYHD- 300 (520)
T ss_pred CCcee--eecceEeeeeccCCCCc-----CcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEEC-
Confidence 11111 13457999998643321 11224456677778888888999999888875 7899999999999864
Q ss_pred CceeecccCcceecC
Q 038743 644 FCPKVSDFGLAKLMG 658 (839)
Q Consensus 644 ~~~kl~DfGla~~~~ 658 (839)
|.+.|+|.+.+-...
T Consensus 301 G~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 301 GKLYIIDVSQSVEHD 315 (520)
T ss_pred CEEEEEEccccccCC
Confidence 579999988775443
No 498
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.54 E-value=0.051 Score=54.88 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=22.1
Q ss_pred CeeeecCCCCCcEEE-CCCCceeecccCccee
Q 038743 626 NRIIHCDIKPENILL-DENFCPKVSDFGLAKL 656 (839)
Q Consensus 626 ~~iiH~dlk~~Nill-~~~~~~kl~DfGla~~ 656 (839)
..++|.|+.+.|||+ +.++.++|+||..+..
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 468999999999999 8899999999998864
No 499
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.33 E-value=0.18 Score=54.33 Aligned_cols=138 Identities=20% Similarity=0.263 Sum_probs=82.5
Q ss_pred CCceEEEEEeCCCcEEEEEEecccCCcchHHHHHHHHHhhccccCC------cccccce----eecCCceEEEEeeccCC
Q 038743 515 GFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFVTEVNTIGSMHHMN------LVRLCGY----CSEGSNRLLVYEFMKNG 584 (839)
Q Consensus 515 ~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~----~~~~~~~~lv~e~~~~g 584 (839)
.-..+|+....+|+. ++|..... ....+...|+..+..|.-.. |..+-|- ...+...+-+++|++|.
T Consensus 37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence 456789998877777 88887654 34556777777777763222 2222221 22223778899999998
Q ss_pred Chhh-hc--------------ccC----C--C-CCcccCChh-------------hHHHHHHHHHHHhHHhhh----ccC
Q 038743 585 SLDK-WI--------------FPS----Y--H-HRDRVLDWT-------------TRFNIAIATAQGIAYFHE----QCR 625 (839)
Q Consensus 585 sL~~-~l--------------~~~----~--~-~~~~~l~~~-------------~~~~i~~~ia~~L~yLH~----~~~ 625 (839)
.+.. .. +.. . + .....+.|. .-.....++...+..+++ ...
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 8873 11 100 0 0 011123333 111233344444444443 222
Q ss_pred Ce---eeecCCCCCcEEECCCCc-eeecccCcce
Q 038743 626 NR---IIHCDIKPENILLDENFC-PKVSDFGLAK 655 (839)
Q Consensus 626 ~~---iiH~dlk~~Nill~~~~~-~kl~DfGla~ 655 (839)
.. +||+|+.|.||+++.+.. +.+.||+-+.
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 23 999999999999998875 8999999875
No 500
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.01 E-value=0.067 Score=58.43 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=52.0
Q ss_pred ccccccCCCceEEEEEeCC-CcEEEEEEecccC------CcchHHHHHHHHHhhccc--cCC-cccccceeecCCceEEE
Q 038743 508 AQLLGTGGFGSVYKGSLGD-GTLVAVKKLDRVL------PHGEKEFVTEVNTIGSMH--HMN-LVRLCGYCSEGSNRLLV 577 (839)
Q Consensus 508 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~--h~n-iv~l~g~~~~~~~~~lv 577 (839)
.+.||-|.-..||++..++ ++.|+||.-.... +-...+..-|.+.|+... .|. +++++ +.+.....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy--~~D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVY--LFDSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEE--EECcHHhhHH
Confidence 3578999999999998753 5689999763221 223455666777776652 443 44454 3455677889
Q ss_pred EeeccC-CChhhhc
Q 038743 578 YEFMKN-GSLDKWI 590 (839)
Q Consensus 578 ~e~~~~-gsL~~~l 590 (839)
||+++. ..|++.|
T Consensus 112 MEdL~~~~ilR~~L 125 (409)
T PRK12396 112 MEDLSDHTILRTAL 125 (409)
T ss_pred HHhCcccHHHHHHH
Confidence 999854 2344443
Done!