BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038745
(881 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 658 ITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK-----YKNFSISD 712
+T +++G A A+ + L+ LGITH+L + + +K Y +D
Sbjct: 32 VTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND 91
Query: 713 NEDTNISSIFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWN 771
++ N+S+ FE A+DFID + Q GRVLVHC EG SRS TLV+AYLM+R+ + A
Sbjct: 92 TQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL- 150
Query: 772 TLKRVHRRAQPNDGFAKILLELDRKLHGE 800
++ R +R PNDGF L +L+ +L E
Sbjct: 151 SIVRQNREIGPNDGFLAQLCQLNDRLAKE 179
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 658 ITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK-----YKNFSISD 712
+T +++G A A+ + L+ LGITH+L + + +K Y +D
Sbjct: 31 VTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND 90
Query: 713 NEDTNISSIFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWN 771
++ N+S+ FE A+DFID + Q GRVLVHC EG SRS TLV+AYLM+R+ + A
Sbjct: 91 TQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL- 149
Query: 772 TLKRVHRRAQPNDGFAKILLELDRKLHGE 800
++ R +R PNDGF L +L+ +L E
Sbjct: 150 SIVRQNREIGPNDGFLAQLCQLNDRLAKE 178
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 658 ITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK-----YKNFSISD 712
+T +++G A A+ + L+ LGITH+L + + +K Y +D
Sbjct: 32 VTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND 91
Query: 713 NEDTNISSIFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWN 771
++ N+S+ FE A+DFID + Q GRVLVH EG SRS TLV+AYLM+R+ + A
Sbjct: 92 TQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSAL- 150
Query: 772 TLKRVHRRAQPNDGFAKILLELDRKLHGE 800
++ R +R PNDGF L +L+ +L E
Sbjct: 151 SIVRQNREIGPNDGFLAQLCQLNDRLAKE 179
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 640 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQF 699
L+R+ + +AA + SLF+G A AAR L LGITH++ A + Q D+
Sbjct: 31 LQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKF-QVDTGA 89
Query: 700 PDL----FKYKNFSISDNEDTNISSIFEEASDFI-DHVEQTGGRVLVHCFEGRSRSATLV 754
+Y DN ++S F + +I + GRVLVHC G SRSATLV
Sbjct: 90 KFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLV 149
Query: 755 LAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 800
LA+LM+ +N TL++A T++ HR PN GF + L LD +L E
Sbjct: 150 LAFLMIYENMTLVEAIQTVQ-AHRNICPNSGFLRQLQVLDNRLGRE 194
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 640 LERITLISEAANTERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQF 699
L+R+ + +AA + SLF+G A AAR L LGITH++ A + Q D+
Sbjct: 31 LQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKF-QVDTGA 89
Query: 700 PDL----FKYKNFSISDNEDTNISSIFEEASDFI-DHVEQTGGRVLVHCFEGRSRSATLV 754
+Y DN ++S F + +I + GRVLVHC G SRSATLV
Sbjct: 90 KFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLV 149
Query: 755 LAYLMLRKNFTLLQAWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 800
LA+LM+ +N TL++A T++ HR PN GF + L LD +L E
Sbjct: 150 LAFLMICENMTLVEAIQTVQ-AHRNICPNSGFLRQLQVLDNRLGRE 194
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNE 714
P I LF+G + + L+ GIT +L N + F LF+YK+ + DN+
Sbjct: 4 PVEILPYLFLGSCSHSSDLQGLQACGITAVL----NVSASCPNHFEGLFRYKSIPVEDNQ 59
Query: 715 DTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLK 774
IS+ F+EA FID V+ +GGRVLVH G SRSAT+ LAYLM + L +A++ +K
Sbjct: 60 MVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVK 119
Query: 775 RVHRRAQPNDGFAKILLELDRKL 797
+ PN F LL+ + ++
Sbjct: 120 QRRGVISPNFSFMGQLLQFETQV 142
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 662 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISS 720
L++G A + L+ LGITH+L + + + L +Y D+ ++S
Sbjct: 9 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 68
Query: 721 IFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRR 779
F+ A+DFI + Q GG++LVHC G SRSATLVLAYLML + TL++A +K HR
Sbjct: 69 HFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD-HRG 127
Query: 780 AQPNDGFAKILLELDRKL 797
PN GF + LL LDR+L
Sbjct: 128 IIPNRGFLRQLLALDRRL 145
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNED 715
+ ITSSLF+G A + + L+ GIT C+ I + +P F+Y ++D
Sbjct: 27 AQITSSLFLGRGSVASNRHLLQARGIT---CIVNATIEIPNFNWPQ-FEYVKVPLADMPH 82
Query: 716 TNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKR 775
I F+ +D I V + G LVHC G SRSATL +AYLM N LL+A+N +K
Sbjct: 83 APIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKA 142
Query: 776 VHRRAQPNDGFAKILLELDRKLHGEVSMEWQQ 807
+PN GF + L++ +R+L G+ +++ Q
Sbjct: 143 RRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQ 174
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNE 714
P I L++G A A L +L IT +L N ++ YK + D+
Sbjct: 6 PVEILPFLYLGSAYHASKCEFLANLHITALL----NVSRRTSEACMTHLHYKWIPVEDSH 61
Query: 715 DTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLK 774
+ISS F+EA DFID V + GG+VLVH G SRS T+ +AYLM K F L +A++ +K
Sbjct: 62 TADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIK 121
Query: 775 RVHRRAQPNDGFAKILLELDRKL 797
+ PN GF LL+ + ++
Sbjct: 122 QRRSMVSPNFGFMGQLLQYESEI 144
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 662 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL-FKYKNFSISDNEDTNISS 720
L++G A + L+ LGITH+L + + + L +Y D+ ++S
Sbjct: 10 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 69
Query: 721 IFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRR 779
F+ A+DFI + Q GG++LVH G SRSATLVLAYLML + TL++A +K HR
Sbjct: 70 HFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD-HRG 128
Query: 780 AQPNDGFAKILLELDRKL 797
PN GF + LL LDR+L
Sbjct: 129 IIPNRGFLRQLLALDRRL 146
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNE 714
P I L++G A A L LGIT +L N + F ++YK + DN
Sbjct: 4 PVEILPFLYLGSAYHAARRDMLDALGITALL----NVSSDCPNHFEGHYQYKCIPVEDNH 59
Query: 715 DTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLK 774
+ISS F EA ++ID V+ GRVLVH G SRSAT+ LAYLM++K L +A+ +K
Sbjct: 60 KADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVK 119
Query: 775 RVHRRAQPNDGFAKILLELDRKL 797
+ PN F LL+ + ++
Sbjct: 120 QRRSIISPNFSFMGQLLQFESQV 142
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK------YKNF 708
P I +L++G A + ++ +L LGI +IL + N P+ F+ YK
Sbjct: 3 PVQILPNLYLGSARDSANLESLAKLGIRYILNVTPN--------LPNFFEKNGDFHYKQI 54
Query: 709 SISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQ 768
ISD+ N+S F EA +FID VLVHC G SRS T+ +AYLM + + +L
Sbjct: 55 PISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLND 114
Query: 769 AWNTLKRVHRRAQPNDGFAKILLELDRKLHGE 800
A++ +KR PN F LL+ +R L E
Sbjct: 115 AYDLVKRKKSNISPNFNFMGQLLDFERSLRLE 146
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 662 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK-----YKNFSISDNEDT 716
L+IG A Y L+ G TH+L A+ D+ PD ++ Y D
Sbjct: 61 LYIGDEATALDRYRLQKAGFTHVLN-AAHGRWNVDTG-PDYYRDMDIQYHGVEADDLPTF 118
Query: 717 NISSIFEEASDFIDH-VEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKR 775
++S F A+ FID + ++LVHC GRSRSATLVLAYLM+ K+ TL+ A + +
Sbjct: 119 DLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAK 178
Query: 776 VHRRAQPNDGFAKILLELDRKL 797
+R PN GF K L ELD++L
Sbjct: 179 -NRCVLPNRGFLKQLRELDKQL 199
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFK------YKNF 708
P I +L++G A + ++ +L LGI +IL + N P+ F+ YK
Sbjct: 6 PVQILPNLYLGSARDSANLESLAKLGIRYILNVTPN--------LPNFFEKNGDFHYKQI 57
Query: 709 SISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQ 768
ISD+ N+S F EA +FID VLVH G SRS T+ +AYLM + + +L
Sbjct: 58 PISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLND 117
Query: 769 AWNTLKRVHRRAQPNDGFAKILLELDRKL 797
A++ +KR PN F LL+ +R L
Sbjct: 118 AYDLVKRKKSNISPNFNFMGQLLDFERSL 146
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLF------KYKNF 708
P I L++G A + ++ L+ GI +IL + N P+LF KYK
Sbjct: 4 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPN--------LPNLFENAGEFKYKQI 55
Query: 709 SISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQ 768
ISD+ N+S F EA FID VLVH G SRS T+ +AYLM + N ++
Sbjct: 56 PISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMND 115
Query: 769 AWNTLKRVHRRAQPNDGFAKILLELDRKL 797
A++ +K PN F LL+ +R L
Sbjct: 116 AYDIVKMKKSNISPNFNFMGQLLDFERTL 144
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNED 715
S IT SL+I +AA + L IT ++ + + ++ + D+ +Y ++D+ +
Sbjct: 21 SQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVV---NTLYEDI-QYMQVPVADSPN 76
Query: 716 TNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKR 775
+ + F+ +D I VE GR L+HC G SRSA L LAYLM +LL A K
Sbjct: 77 SRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKS 136
Query: 776 VHRRAQPNDGFAKILLELDRKLHGE 800
+PN GF + L+ + +L G+
Sbjct: 137 CRPIIRPNSGFWEQLIHYEFQLFGK 161
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 655 PSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNE 714
P+ I +F+G A ++ L++ G+ +IL N + D+ FP +F+Y N + D E
Sbjct: 4 PTQIFEHVFLGSEWNASNLEDLQNRGVRYIL----NVTREIDNFFPGVFEYHNIRVYDEE 59
Query: 715 DTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLK 774
T++ + + + FI ++ G + LVH G SRSA+ V+AY M + L +A++ +K
Sbjct: 60 ATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVK 119
Query: 775 RVHRRAQPNDGFAKILLE 792
+PN F + L E
Sbjct: 120 ERRTVTKPNPSFMRQLEE 137
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 658 ITSSLFIG---GALAARSVYTLKHLGITHILCLCAN-EIGQSDSQFPDLFKYKNFSISDN 713
I LF+G A+ ++ KH GITHI+C+ N E F LF+Y I+DN
Sbjct: 9 ILPGLFLGPYSSAMKSKLPVLQKH-GITHIICIRQNIEANFIKPNFQQLFRYLVLDIADN 67
Query: 714 EDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTL 773
NI F +FID Q GG+VLVH G SRSA V+AY+M A+ +
Sbjct: 68 PVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYV 127
Query: 774 KRVHRRAQPNDGFAKILLELD 794
+ PN GF L E +
Sbjct: 128 QERRFCINPNAGFVHQLQEYE 148
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDL--FKYKNFSISDN 713
+ I L+IG AR L +THIL + DS P L KY +D+
Sbjct: 8 NKILPGLYIGNFKDARDAEQLSKNKVTHILSV-------HDSARPMLEGVKYLCIPAADS 60
Query: 714 EDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTL 773
N++ F+E+ FI G LVHC G SRS TLV+AY+M +F A +T+
Sbjct: 61 PSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTV 120
Query: 774 KRVHRRAQPNDGFAKILLELDR 795
+ A PN GF + L E ++
Sbjct: 121 RAGRSCANPNVGFQRQLQEFEK 142
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 662 LFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNEDTNISSI 721
L +G AA + TLK +THIL N ++ F F YK+ SI D +TNI S
Sbjct: 11 LLLGSQDAAHDLDTLKKNKVTHIL----NVAYGVENAFLSDFTYKSISILDLPETNILSY 66
Query: 722 FEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRVHRRAQ 781
F E +FI+ ++ G VLVH G SR+A +V+ +LM + + A++ +K
Sbjct: 67 FPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSIC 126
Query: 782 PNDGFAKIL 790
PN GF + L
Sbjct: 127 PNSGFMEQL 135
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNED 715
+ + L++G + A+ + L ITHI+ I +S Y ++D +
Sbjct: 9 TKVLPGLYLGNFIDAKDLDQLGRNKITHII-----SIHESPQPLLQDITYLRIPVADTPE 63
Query: 716 TNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKR 775
I F+E +FI GG LVH F G SRS T+V AY+M +K
Sbjct: 64 VPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKA 123
Query: 776 VHRRAQPNDGFAKILLEL 793
A PN GF + L E
Sbjct: 124 TRPIANPNPGFRQQLEEF 141
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCAN------EIGQSDSQFPDLFKYKNFS 709
+ I LF+G A+ + T++ L I +++ + + E G LF YK
Sbjct: 5 TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKG--------LFNYKRLP 56
Query: 710 ISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQA 769
+D+ N+ FEEA +FI+ Q G +L+HC G SRSAT+V+AYLM T+ A
Sbjct: 57 ATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDA 116
Query: 770 WNTLKRVHRRAQPNDGFAKILLELDRKLHGEVS 802
+ +K PN F LLE + L+ V+
Sbjct: 117 YKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVT 149
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFP------DLFKYKNFS 709
+ I LF+G A+ + T++ L I +++ + P LF YK
Sbjct: 9 TPILPFLFLGNEQDAQDLDTMQRLNIGYVI--------NVTTHLPLYHYEKGLFNYKRLP 60
Query: 710 ISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQA 769
+D+ N+ FEEA +FI+ Q G +L+HC G SRSAT+V+AYLM T+ A
Sbjct: 61 ATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDA 120
Query: 770 WNTLKRVHRRAQPNDGFAKILLELDRKLHGEVS 802
+ +K PN F LLE + L+ V+
Sbjct: 121 YKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVT 153
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 656 SSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYKNFSISDNED 715
+ + +LFIG A AA + L GIT LC N Q + D+
Sbjct: 13 ARVAPALFIGNARAAGATELLVRAGIT----LCVNVSRQQPGPRAPGVAELRVPVFDDPA 68
Query: 716 TNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKR 775
++ + E ++ + GG LV+C GRSRSA + AYLM + +L +A+ +K
Sbjct: 69 EDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKS 128
Query: 776 VHRRAQPNDGFAKILLELDRKLHGE 800
A+PN GF L + ++ L +
Sbjct: 129 ARPVAEPNLGFWAQLQKYEQTLQAQ 153
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 714 EDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTL 773
D+ I+ + I ++L+HC G SRSATL++AY+M N +L +++ L
Sbjct: 95 HDSQIALDLPSLTSIIHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLL 154
Query: 774 KRVHRRAQPNDGFAKILLELDRKLHGE 800
K + P+ G L+E + L+ +
Sbjct: 155 KSRADKINPSIGLIFQLMEWEVALNAK 181
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 712 DNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTL----- 766
D+ T+IS F++ + F+ +Q VLVH G +RS ++LAYLM + +L
Sbjct: 84 DDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYF 143
Query: 767 LQAWNTLKRVHRRAQPNDGFAKILLE 792
L +++++ + N F + ++E
Sbjct: 144 LYVYHSMRDLRGAFVENPSFKRQIIE 169
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 714 EDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTL 773
D+ I+ + I ++L+H G SRSATL++AY+M N +L +++ L
Sbjct: 95 HDSQIALDLPSLTSIIHAATTKREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLL 154
Query: 774 KRVHRRAQPNDGFAKILLELDRKLHGE 800
K + P+ G L+E + L+ +
Sbjct: 155 KSRADKINPSIGLIFQLMEWEVALNAK 181
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 712 DNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYL 758
D+ T+IS F++ + F+ +Q VLVHC G +RS +LAYL
Sbjct: 80 DDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYL 126
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 714 EDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTL 773
D+ I+ + I ++L+H G SRSATL++AY+M N +L +++ L
Sbjct: 95 HDSQIALDLPSLTSIIHAATTKREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLL 154
Query: 774 KRVHRRAQPNDGFAKILLELDRKLHGE 800
K + P+ G L+E + L+ +
Sbjct: 155 KSRADKINPSIGLIFQLMEWEVALNAK 181
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 712 DNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTL 766
D+ T+IS F++ + F+ +Q VLVHC G +RS +LAYL + +L
Sbjct: 101 DDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESL 155
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 722 FEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRV--HRR 779
+ F + G V VHC GRSRSAT+V AYL+ N++ +A + ++ H
Sbjct: 75 LHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHIS 134
Query: 780 AQPNDGFAKILLELDRKLHGEVS 802
+P+ LE+ ++ H E++
Sbjct: 135 IRPSQ------LEVLKEFHKEIT 151
>pdb|1CJA|A Chain A, Actin-Fragmin Kinase, Catalytic Domain From Physarum
Polycephalum
pdb|1CJA|B Chain B, Actin-Fragmin Kinase, Catalytic Domain From Physarum
Polycephalum
Length = 342
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 249 LFLMSYVHGSPLLESSSAFESRETAEKTAAALGRVLMLDLVIRNEDRLPCRQLRW--RGN 306
+ LM V G L + ++ + T LG ++ LD+++ N DRLP + W GN
Sbjct: 158 ILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLP---IAWTNEGN 214
Query: 307 PANLLLADKMASA 319
N++L+++ A+
Sbjct: 215 LDNIMLSERGATV 227
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 736 GGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQAWNTLKRV--HRRAQPNDGFAKILLEL 793
G V VH GRSRSAT+V AYL+ N++ +A + ++ H +P+ LE+
Sbjct: 90 GQCVYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQ------LEV 143
Query: 794 DRKLHGEVS 802
++ H E++
Sbjct: 144 LKEFHKEIT 152
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 725 ASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQ--AWNTLKR 775
+F+D E G + VHC G R+ TL+ Y+M T + AW + R
Sbjct: 258 VKEFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICR 310
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 33.9 bits (76), Expect = 0.46, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 652 TERPSSITSSLFIGGALAARSVYTLKHLGITHILCLCANEIGQSDSQFPDLFKYK----N 707
T P+ I + +G L A +V + + I+ IL L E+ P LFK +
Sbjct: 7 TLSPTQIIQYIHLGSFLNAHNVDYIHNNNISSIL-LVGIEV-------PSLFKDQCDILR 58
Query: 708 FSISDNEDTNISSIFEEASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLL 767
I E + A FI Q VL+ G +++ +V+A+LM + + +
Sbjct: 59 LDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFI 118
Query: 768 QAWNTLKRVHRRAQPNDGFAKILLELDRKL 797
A+N ++ ++ GF L ++KL
Sbjct: 119 NAFNKVQGLYPLIDIESGFILQLKLFEKKL 148
>pdb|4EME|A Chain A, X-Ray Crystal Structure And Specificity Of The Plasmodium
Falciparum Malaria Aminopeptidase
pdb|4EME|B Chain B, X-Ray Crystal Structure And Specificity Of The Plasmodium
Falciparum Malaria Aminopeptidase
pdb|4EME|C Chain C, X-Ray Crystal Structure And Specificity Of The Plasmodium
Falciparum Malaria Aminopeptidase
pdb|4EME|D Chain D, X-Ray Crystal Structure And Specificity Of The Plasmodium
Falciparum Malaria Aminopeptidase
Length = 571
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 594 ELEQWNEMLRNDAVKLCQENNFNTGFFEGSDGVVDAYELKVRLEHI 639
E E WN + +N+ LC+EN GFF G + +D + + + HI
Sbjct: 44 EGETWN-LNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHI 88
>pdb|2H1J|A Chain A, 3.1 A X-Ray Structure Of Putative Oligoendopeptidase F:
Crystals Grown By Microfluidic Seeding
pdb|2H1J|B Chain B, 3.1 A X-Ray Structure Of Putative Oligoendopeptidase F:
Crystals Grown By Microfluidic Seeding
pdb|2H1N|A Chain A, 3.0 A X-Ray Structure Of Putative Oligoendopeptidase F:
Crystals Grown By Vapor Diffusion Technique
pdb|2H1N|B Chain B, 3.0 A X-Ray Structure Of Putative Oligoendopeptidase F:
Crystals Grown By Vapor Diffusion Technique
Length = 567
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 329 DSAIKKYRPRVIRALQKERRTASVDSRVIPHSAGLVSEGSD-----LSDIIESPKSSELS 383
++ +K Y P ++ LQKE + AS +++I SA + EG + L +ESP +
Sbjct: 120 ETQLKTYAPVIVEDLQKENKLASEYTKLIA-SAKIXFEGEERTLAQLQPFVESPDRAXRQ 178
Query: 384 RRSQ 387
R S+
Sbjct: 179 RASE 182
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 725 ASDFIDHVEQTGGRVLVHCFEGRSRSATLVLAYLMLRKNFTLLQ--AWNTLKR 775
+F+D E G + VH G R+ TL+ Y+M T + AW + R
Sbjct: 258 VKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICR 310
>pdb|3IVZ|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3IVZ|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3IW3|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3IW3|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3KI8|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3KI8|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3KLC|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase
pdb|3KLC|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase
Length = 262
Score = 29.3 bits (64), Expect = 9.7, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 332 IKKYRPRV--IRALQKERRTASVDSRVIPHSAGLVSEGSDLSDIIESPKSSELSRRSQTS 389
+ Y PR IRAL+ + T + D + GL G L I SPK+ LS S+T
Sbjct: 173 VMPYAPRAMPIRALENKVYTVTADR--VGEERGLKFIGKSL---IASPKAEVLSMASETE 227
Query: 390 DESTVSDFHIVAIDSGVPRRPPAGKRAND 418
+E V++ ID + R KR ND
Sbjct: 228 EEVGVAE-----IDLSLVR----NKRIND 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,975,566
Number of Sequences: 62578
Number of extensions: 934987
Number of successful extensions: 2732
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2667
Number of HSP's gapped (non-prelim): 42
length of query: 881
length of database: 14,973,337
effective HSP length: 107
effective length of query: 774
effective length of database: 8,277,491
effective search space: 6406778034
effective search space used: 6406778034
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)