Query 038747
Match_columns 401
No_of_seqs 246 out of 1852
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:05:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.7E-11 1.3E-15 79.7 3.6 46 6-51 5-50 (53)
2 2e31_A FBS1, F-box only protei 99.1 3.3E-11 1.1E-15 108.5 4.4 51 7-57 48-99 (297)
3 1zgk_A Kelch-like ECH-associat 99.0 1.2E-07 4.2E-12 87.0 24.9 196 119-340 91-296 (308)
4 3ii7_A Kelch-like protein 7; p 99.0 8E-08 2.7E-12 88.1 22.0 210 106-340 52-281 (306)
5 2vpj_A Kelch-like protein 12; 99.0 1.7E-07 5.7E-12 85.7 23.0 209 106-340 59-287 (301)
6 4asc_A Kelch repeat and BTB do 99.0 2.1E-07 7.1E-12 85.8 23.4 198 119-339 68-285 (315)
7 2xn4_A Kelch-like protein 2; s 99.0 4.3E-07 1.5E-11 83.0 25.3 206 107-338 59-283 (302)
8 2woz_A Kelch repeat and BTB do 98.9 4E-07 1.4E-11 84.0 24.7 194 120-337 80-293 (318)
9 2vpj_A Kelch-like protein 12; 98.9 1E-06 3.4E-11 80.5 25.8 219 118-364 31-262 (301)
10 3ii7_A Kelch-like protein 7; p 98.8 1E-06 3.4E-11 80.7 23.7 219 117-364 23-256 (306)
11 1zgk_A Kelch-like ECH-associat 98.8 6.3E-07 2.2E-11 82.3 21.4 223 118-364 39-271 (308)
12 2xn4_A Kelch-like protein 2; s 98.8 1.8E-06 6E-11 78.9 24.0 219 118-364 30-260 (302)
13 2uvk_A YJHT; unknown function, 98.7 1.3E-06 4.4E-11 81.9 21.0 239 107-364 17-325 (357)
14 4asc_A Kelch repeat and BTB do 98.7 5.3E-06 1.8E-10 76.2 24.7 230 111-362 6-250 (315)
15 2woz_A Kelch repeat and BTB do 98.7 6.9E-06 2.4E-10 75.6 23.8 234 109-364 15-262 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.5 1E-05 3.5E-10 77.9 21.8 49 7-55 16-64 (445)
17 3v7d_B Cell division control p 98.5 0.00014 4.7E-09 70.1 29.9 42 8-49 13-55 (464)
18 2uvk_A YJHT; unknown function, 98.4 2.2E-05 7.4E-10 73.4 19.0 153 182-340 168-351 (357)
19 2zwa_A Leucine carboxyl methyl 98.3 1.8E-05 6.1E-10 81.0 18.5 213 108-340 396-644 (695)
20 1p22_A F-BOX/WD-repeat protein 98.3 3.3E-05 1.1E-09 74.1 19.4 48 6-53 7-58 (435)
21 3l2o_B F-box only protein 4; s 98.0 2.4E-06 8.1E-11 76.1 2.3 50 9-58 4-53 (312)
22 1k3i_A Galactose oxidase precu 97.6 0.0012 4E-08 67.1 15.9 196 119-338 220-448 (656)
23 2ast_B S-phase kinase-associat 97.6 2E-05 6.7E-10 73.0 2.5 44 6-49 5-48 (336)
24 2zwa_A Leucine carboxyl methyl 97.4 0.0035 1.2E-07 64.1 15.7 178 181-364 411-616 (695)
25 1k3i_A Galactose oxidase precu 97.1 0.0073 2.5E-07 61.2 15.3 198 119-336 167-383 (656)
26 2p1m_B Transport inhibitor res 97.1 0.00016 5.4E-09 72.4 2.7 37 7-43 3-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.0013 4.4E-08 65.7 2.4 33 11-43 14-47 (592)
28 2z2n_A Virginiamycin B lyase; 93.2 3.8 0.00013 35.5 19.1 191 104-335 104-299 (299)
29 4gga_A P55CDC, cell division c 93.1 4.5 0.00015 37.6 17.1 197 107-337 114-316 (420)
30 3jrp_A Fusion protein of prote 91.8 6.8 0.00023 35.1 18.8 65 267-333 172-242 (379)
31 4aez_A CDC20, WD repeat-contai 91.4 8.6 0.00029 35.3 18.3 190 108-335 103-297 (401)
32 3dsm_A Uncharacterized protein 88.6 13 0.00044 33.2 23.3 141 181-339 63-221 (328)
33 3jro_A Fusion protein of prote 88.5 13 0.00044 37.8 16.4 58 276-333 177-240 (753)
34 3q7m_A Lipoprotein YFGL, BAMB; 87.0 9.7 0.00033 34.6 13.2 111 213-337 48-168 (376)
35 1q7f_A NHL, brain tumor CG1071 86.7 15 0.0005 31.7 20.9 204 104-340 35-247 (286)
36 1q7f_A NHL, brain tumor CG1071 83.3 21 0.00072 30.6 22.3 188 107-331 86-280 (286)
37 3ei3_B DNA damage-binding prot 81.6 29 0.001 31.1 17.1 184 116-334 94-285 (383)
38 3hrp_A Uncharacterized protein 79.9 19 0.00064 33.5 12.0 109 218-337 141-255 (409)
39 3hfq_A Uncharacterized protein 79.6 22 0.00077 31.5 12.2 103 234-337 18-124 (347)
40 3scy_A Hypothetical bacterial 78.9 35 0.0012 30.4 14.7 103 234-338 233-346 (361)
41 3e5z_A Putative gluconolactona 78.5 32 0.0011 29.7 20.1 190 117-340 49-255 (296)
42 2qc5_A Streptogramin B lactona 78.3 31 0.0011 29.4 13.5 108 218-338 30-140 (300)
43 3v65_B Low-density lipoprotein 78.2 41 0.0014 30.8 18.7 188 109-338 87-284 (386)
44 1k8k_C P40, ARP2/3 complex 41 76.9 39 0.0013 29.9 13.5 97 234-333 30-129 (372)
45 3q7m_A Lipoprotein YFGL, BAMB; 76.6 39 0.0013 30.4 13.0 109 213-337 98-213 (376)
46 3v9f_A Two-component system se 74.2 78 0.0027 32.0 17.1 195 109-340 417-620 (781)
47 1pjx_A Dfpase, DIISOPROPYLFLUO 73.8 43 0.0015 28.9 17.2 194 117-338 45-264 (314)
48 3g4e_A Regucalcin; six bladed 73.2 46 0.0016 28.9 17.9 196 107-340 22-239 (297)
49 1kv9_A Type II quinohemoprotei 71.9 67 0.0023 32.0 14.3 111 212-337 60-193 (668)
50 3hfq_A Uncharacterized protein 70.8 55 0.0019 28.8 15.1 73 266-340 250-328 (347)
51 1k8k_C P40, ARP2/3 complex 41 70.6 42 0.0014 29.7 11.6 70 266-337 19-89 (372)
52 2ad6_A Methanol dehydrogenase 69.4 74 0.0025 31.0 13.7 112 212-337 56-191 (571)
53 1rwi_B Serine/threonine-protei 69.1 50 0.0017 27.7 18.3 184 107-333 75-266 (270)
54 4e54_B DNA damage-binding prot 68.7 72 0.0025 29.3 17.7 57 277-335 376-434 (435)
55 3g4e_A Regucalcin; six bladed 68.6 57 0.002 28.2 11.8 101 218-331 24-139 (297)
56 3mmy_A MRNA export factor; mRN 68.3 61 0.0021 28.3 16.9 60 276-335 235-308 (368)
57 2z2n_A Virginiamycin B lyase; 67.0 58 0.002 27.6 22.0 194 104-340 62-263 (299)
58 2hqs_A Protein TOLB; TOLB, PAL 66.4 80 0.0027 29.0 17.7 185 118-340 203-396 (415)
59 2qc5_A Streptogramin B lactona 66.3 60 0.0021 27.5 19.8 192 104-339 25-225 (300)
60 1gxr_A ESG1, transducin-like e 66.3 64 0.0022 27.8 12.5 61 276-336 116-177 (337)
61 1kb0_A Quinohemoprotein alcoho 66.0 54 0.0018 32.8 12.1 114 212-337 71-205 (677)
62 4e54_B DNA damage-binding prot 65.9 34 0.0011 31.7 10.1 191 111-334 134-330 (435)
63 1yfq_A Cell cycle arrest prote 65.4 68 0.0023 27.8 16.0 98 234-335 170-286 (342)
64 3bws_A Protein LP49; two-domai 64.9 82 0.0028 28.6 16.5 192 107-337 178-396 (433)
65 3mbr_X Glutamine cyclotransfer 64.5 68 0.0023 27.5 15.4 112 216-339 28-142 (243)
66 2dg1_A DRP35, lactonase; beta 64.5 35 0.0012 29.9 9.6 112 218-337 55-177 (333)
67 3e5z_A Putative gluconolactona 63.3 69 0.0024 27.4 11.2 108 218-337 38-167 (296)
68 1yiq_A Quinohemoprotein alcoho 62.9 97 0.0033 31.0 13.4 114 212-337 64-198 (689)
69 3vgz_A Uncharacterized protein 61.8 81 0.0028 27.5 23.8 202 107-336 98-308 (353)
70 3dsm_A Uncharacterized protein 61.5 85 0.0029 27.6 14.1 114 222-340 5-124 (328)
71 3k26_A Polycomb protein EED; W 59.8 88 0.003 27.2 17.6 63 267-331 299-366 (366)
72 1ri6_A Putative isomerase YBHE 59.6 86 0.0029 27.1 16.0 102 234-339 151-272 (343)
73 1rwi_B Serine/threonine-protei 58.9 79 0.0027 26.4 15.7 191 104-337 29-228 (270)
74 3dwl_C Actin-related protein 2 58.4 84 0.0029 27.8 11.1 61 276-336 224-286 (377)
75 3fm0_A Protein CIAO1; WDR39,SG 58.2 99 0.0034 27.3 15.0 54 276-329 169-223 (345)
76 1npe_A Nidogen, entactin; glyc 58.1 85 0.0029 26.5 21.9 194 106-339 44-247 (267)
77 2fp8_A Strictosidine synthase; 57.9 79 0.0027 27.7 10.7 110 218-337 29-180 (322)
78 3fvz_A Peptidyl-glycine alpha- 56.6 1E+02 0.0035 27.0 16.2 109 213-330 199-321 (329)
79 3jrp_A Fusion protein of prote 55.3 1.1E+02 0.0037 26.8 14.3 65 267-333 69-136 (379)
80 2ghs_A AGR_C_1268P; regucalcin 54.7 1.1E+02 0.0038 26.8 12.4 104 218-337 60-174 (326)
81 3nok_A Glutaminyl cyclase; bet 54.3 1.1E+02 0.0037 26.6 12.1 109 217-340 63-174 (268)
82 3jro_A Fusion protein of prote 54.0 1.8E+02 0.0063 29.1 13.8 95 235-333 32-134 (753)
83 1ijq_A LDL receptor, low-densi 54.0 1.1E+02 0.0039 26.7 18.5 185 111-338 3-202 (316)
84 3tc9_A Hypothetical hydrolase; 53.8 1.4E+02 0.0048 27.7 14.4 115 213-337 140-263 (430)
85 3vgz_A Uncharacterized protein 53.2 1.1E+02 0.0039 26.5 19.9 99 234-336 164-267 (353)
86 1evh_A WH1 domain, protein (ME 52.7 18 0.00062 26.9 4.4 41 119-168 12-52 (112)
87 3zwl_B Eukaryotic translation 52.1 1.2E+02 0.0041 26.4 18.9 60 276-337 194-255 (369)
88 4aow_A Guanine nucleotide-bind 52.0 1.2E+02 0.0039 26.2 16.2 27 307-333 312-339 (340)
89 3mmy_A MRNA export factor; mRN 51.4 70 0.0024 27.9 9.3 64 276-339 61-125 (368)
90 3no2_A Uncharacterized protein 51.3 94 0.0032 26.7 9.8 112 214-336 83-200 (276)
91 3u4y_A Uncharacterized protein 51.2 1.2E+02 0.0041 26.1 18.7 180 117-334 19-210 (331)
92 4ggc_A P55CDC, cell division c 50.6 1.2E+02 0.004 25.8 18.8 67 107-193 34-100 (318)
93 2pm9_A Protein WEB1, protein t 50.5 1.4E+02 0.0047 26.7 14.2 64 266-333 274-339 (416)
94 1r5m_A SIR4-interacting protei 50.2 1.4E+02 0.0047 26.6 15.3 92 234-330 310-424 (425)
95 1pjx_A Dfpase, DIISOPROPYLFLUO 49.9 1E+02 0.0034 26.4 9.9 110 218-337 28-167 (314)
96 2iwa_A Glutamine cyclotransfer 49.8 1.3E+02 0.0043 26.1 14.0 111 219-340 32-145 (266)
97 1jmx_B Amine dehydrogenase; ox 49.4 1.3E+02 0.0044 26.0 11.3 107 218-333 10-136 (349)
98 1n7d_A LDL receptor, low-densi 49.3 83 0.0028 31.6 10.2 109 218-336 507-619 (699)
99 4a11_B DNA excision repair pro 48.6 1.4E+02 0.0049 26.3 18.7 56 277-334 312-368 (408)
100 3i2n_A WD repeat-containing pr 48.6 1.3E+02 0.0046 25.9 15.3 95 234-333 139-245 (357)
101 1ddw_A GLGF-domain protein hom 48.6 30 0.001 26.1 5.1 40 118-168 11-51 (120)
102 1l0q_A Surface layer protein; 48.2 1.5E+02 0.005 26.3 15.8 177 117-337 11-195 (391)
103 1npe_A Nidogen, entactin; glyc 48.2 1.2E+02 0.0042 25.4 17.6 192 112-337 4-204 (267)
104 2dg1_A DRP35, lactonase; beta 47.8 1.4E+02 0.0047 25.9 16.9 206 107-340 53-272 (333)
105 2ojh_A Uncharacterized protein 47.6 1.2E+02 0.0041 25.1 17.7 194 111-338 55-265 (297)
106 3f3f_A Nucleoporin SEH1; struc 47.1 1.3E+02 0.0046 25.5 12.7 65 267-333 71-145 (351)
107 2ovr_B FBW7, F-BOX/WD repeat p 46.8 1.7E+02 0.0058 26.7 20.2 96 234-332 339-443 (445)
108 2hz6_A Endoplasmic reticulum t 46.0 8.6 0.00029 35.3 2.1 108 213-335 4-115 (369)
109 1flg_A Protein (quinoprotein e 45.9 2.2E+02 0.0075 27.7 12.5 115 212-337 62-199 (582)
110 1gxr_A ESG1, transducin-like e 45.7 1.4E+02 0.0048 25.4 18.6 94 234-336 205-301 (337)
111 4aez_A CDC20, WD repeat-contai 45.7 1.7E+02 0.0058 26.3 22.3 98 234-335 284-384 (401)
112 3dr2_A Exported gluconolactona 45.7 1.1E+02 0.0038 26.4 9.5 109 218-338 55-185 (305)
113 3nol_A Glutamine cyclotransfer 45.6 1.5E+02 0.0051 25.6 14.1 112 216-339 50-164 (262)
114 3mkq_A Coatomer beta'-subunit; 45.4 2.4E+02 0.0083 28.0 21.7 97 234-336 163-264 (814)
115 3k26_A Polycomb protein EED; W 45.3 1.5E+02 0.0052 25.6 16.2 65 267-333 241-320 (366)
116 2hqs_A Protein TOLB; TOLB, PAL 44.8 1.8E+02 0.0063 26.5 18.3 184 118-339 159-352 (415)
117 2oiz_A Aromatic amine dehydrog 44.6 93 0.0032 27.9 9.0 57 281-339 286-342 (361)
118 2pm9_A Protein WEB1, protein t 44.5 1.7E+02 0.0058 26.0 13.4 26 307-332 389-415 (416)
119 3m0c_C LDL receptor, low-densi 44.4 2.7E+02 0.0093 28.3 19.8 155 150-334 473-635 (791)
120 3fm0_A Protein CIAO1; WDR39,SG 44.2 1.7E+02 0.0056 25.7 13.7 69 266-336 116-186 (345)
121 1w6s_A Methanol dehydrogenase 44.0 2.4E+02 0.0082 27.6 12.4 112 212-337 56-197 (599)
122 2kwv_A RAD30 homolog B, DNA po 43.3 14 0.00049 22.3 2.0 21 6-26 17-37 (48)
123 2aq5_A Coronin-1A; WD40 repeat 42.9 1.8E+02 0.0063 25.9 20.7 105 234-340 198-310 (402)
124 3lrv_A PRE-mRNA-splicing facto 42.3 1.7E+02 0.0059 25.5 10.9 95 235-333 150-246 (343)
125 2mad_H Methylamine dehydrogena 42.0 2E+02 0.0067 26.0 14.3 56 281-337 298-356 (373)
126 2p4o_A Hypothetical protein; p 42.0 1.7E+02 0.0058 25.3 11.1 104 218-333 42-149 (306)
127 1egx_A VAsp, vasodilator-stimu 40.8 43 0.0015 25.0 4.9 42 119-168 12-53 (115)
128 3bws_A Protein LP49; two-domai 40.7 2E+02 0.0069 25.8 11.8 110 218-336 133-248 (433)
129 4a2l_A BT_4663, two-component 39.8 3E+02 0.01 27.6 19.1 197 103-338 92-298 (795)
130 2z3z_A Dipeptidyl aminopeptida 39.4 2.8E+02 0.0096 27.1 18.0 207 107-338 189-442 (706)
131 1i2h_A PSD-ZIP45(homer-1C/VESL 39.1 48 0.0016 26.6 5.1 39 119-168 17-56 (168)
132 3odt_A Protein DOA1; ubiquitin 38.6 1.8E+02 0.006 24.5 15.8 183 111-334 117-299 (313)
133 4gqb_B Methylosome protein 50; 38.0 2.1E+02 0.0071 25.3 10.2 60 277-336 101-163 (344)
134 3p5b_L Low density lipoprotein 37.6 2.4E+02 0.0082 25.7 18.8 188 110-339 84-285 (400)
135 3sjl_D Methylamine dehydrogena 36.1 2.6E+02 0.0088 25.7 12.5 120 218-346 237-377 (386)
136 3v65_B Low-density lipoprotein 35.8 2.5E+02 0.0085 25.4 16.7 192 106-338 124-326 (386)
137 3m0c_C LDL receptor, low-densi 35.8 3.7E+02 0.013 27.4 21.2 114 213-339 474-597 (791)
138 3vl1_A 26S proteasome regulato 34.0 2.5E+02 0.0086 24.9 17.0 94 234-331 313-419 (420)
139 1n7d_A LDL receptor, low-densi 33.1 3.3E+02 0.011 27.2 11.6 55 213-273 543-601 (699)
140 4gga_A P55CDC, cell division c 32.9 2.8E+02 0.0094 25.0 13.1 87 246-336 94-183 (420)
141 3u4y_A Uncharacterized protein 32.7 2.3E+02 0.008 24.1 12.5 95 234-336 20-122 (331)
142 4g56_B MGC81050 protein; prote 32.6 2.6E+02 0.0089 24.6 16.3 53 277-332 290-344 (357)
143 1pby_B Quinohemoprotein amine 32.5 2.3E+02 0.0079 24.0 9.5 98 235-340 220-320 (337)
144 3s3x_D Psalmotoxin-1; acid-sen 32.4 25 0.00084 19.2 1.6 22 106-127 15-36 (37)
145 3ow8_A WD repeat-containing pr 32.3 2.3E+02 0.0078 24.5 9.4 59 276-334 55-114 (321)
146 3bg1_A Protein SEC13 homolog; 32.2 2.4E+02 0.0083 24.2 16.4 56 276-331 186-247 (316)
147 3v64_C Agrin; beta propeller, 31.6 2.8E+02 0.0094 24.6 21.1 187 109-337 44-240 (349)
148 2xzh_A Clathrin heavy chain 1; 31.3 1.6E+02 0.0055 26.7 7.8 33 305-337 261-296 (365)
149 1l0q_A Surface layer protein; 31.2 2.7E+02 0.0093 24.4 17.7 176 116-335 52-237 (391)
150 1erj_A Transcriptional repress 30.8 2.9E+02 0.0099 24.6 18.3 192 107-335 132-345 (393)
151 3i2n_A WD repeat-containing pr 30.7 2.6E+02 0.0087 24.0 18.3 58 276-333 279-355 (357)
152 3f3f_A Nucleoporin SEH1; struc 30.7 2.4E+02 0.0084 23.8 12.3 58 276-333 30-92 (351)
153 1yfq_A Cell cycle arrest prote 30.6 1.9E+02 0.0065 24.8 8.6 64 276-339 30-97 (342)
154 2be1_A Serine/threonine-protei 30.6 1.2E+02 0.0041 27.3 7.1 30 311-340 110-139 (339)
155 3dwl_C Actin-related protein 2 30.5 34 0.0012 30.5 3.5 58 276-333 30-88 (377)
156 3fvz_A Peptidyl-glycine alpha- 30.4 2.7E+02 0.0092 24.1 21.3 190 119-337 70-283 (329)
157 3frx_A Guanine nucleotide-bind 30.3 2.1E+02 0.0072 24.6 8.8 59 276-334 37-99 (319)
158 3sov_A LRP-6, low-density lipo 30.0 2.8E+02 0.0097 24.3 18.0 109 217-338 89-204 (318)
159 3lrv_A PRE-mRNA-splicing facto 29.8 2.8E+02 0.0094 24.1 12.3 59 276-335 146-205 (343)
160 2hes_X YDR267CP; beta-propelle 29.5 2.8E+02 0.0095 24.0 10.4 63 276-338 126-191 (330)
161 4hw6_A Hypothetical protein, I 28.6 3.5E+02 0.012 24.9 13.7 112 213-334 142-262 (433)
162 2dk7_A Transcription elongatio 28.2 50 0.0017 22.3 3.0 21 314-334 22-42 (73)
163 4h5i_A Guanine nucleotide-exch 28.1 3.1E+02 0.011 24.2 16.1 119 235-356 198-322 (365)
164 3o4h_A Acylamino-acid-releasin 27.3 4E+02 0.014 25.2 12.9 185 110-337 123-320 (582)
165 1got_B GT-beta; complex (GTP-b 27.2 3.1E+02 0.011 23.8 12.3 60 276-335 116-177 (340)
166 1ri6_A Putative isomerase YBHE 26.6 3E+02 0.01 23.4 16.8 104 234-340 200-319 (343)
167 2pm7_B Protein transport prote 26.0 3E+02 0.01 23.3 19.0 57 276-332 177-239 (297)
168 2pm7_B Protein transport prote 25.7 3E+02 0.01 23.2 11.4 64 267-332 67-133 (297)
169 4g56_B MGC81050 protein; prote 25.0 3.5E+02 0.012 23.7 15.4 59 276-336 246-306 (357)
170 2pbi_B Guanine nucleotide-bind 24.7 3.5E+02 0.012 23.6 17.7 89 235-328 263-354 (354)
171 3mkq_A Coatomer beta'-subunit; 24.5 5.2E+02 0.018 25.5 17.4 92 234-332 208-303 (814)
172 3v7d_B Cell division control p 24.2 4E+02 0.014 24.1 16.3 94 235-337 333-427 (464)
173 1r5m_A SIR4-interacting protei 24.2 3.6E+02 0.012 23.6 18.2 97 234-337 227-325 (425)
174 1ugj_A Riken cDNA 2310057J16 p 23.5 1.1E+02 0.0039 23.6 4.7 77 109-198 55-135 (141)
175 3kvp_A Uncharacterized protein 23.3 1.5E+02 0.0051 19.6 4.4 17 323-339 41-57 (72)
176 2ojh_A Uncharacterized protein 23.3 3.1E+02 0.011 22.4 17.7 184 118-338 22-213 (297)
177 1nir_A Nitrite reductase; hemo 23.2 4.9E+02 0.017 24.7 12.4 101 234-335 346-462 (543)
178 3hrp_A Uncharacterized protein 23.2 4.2E+02 0.014 24.0 12.7 200 104-339 136-362 (409)
179 3v64_C Agrin; beta propeller, 23.1 3.9E+02 0.013 23.6 18.7 193 106-338 81-283 (349)
180 3iz6_a 40S ribosomal protein R 23.1 3.9E+02 0.013 23.6 15.7 203 111-336 123-334 (380)
181 4a11_B DNA excision repair pro 23.1 3.8E+02 0.013 23.4 15.2 25 312-336 304-328 (408)
182 3vl1_A 26S proteasome regulato 23.0 3.9E+02 0.013 23.6 22.2 70 266-339 258-332 (420)
183 3dr2_A Exported gluconolactona 22.7 3.6E+02 0.012 22.9 16.6 100 234-340 169-276 (305)
184 1pgu_A Actin interacting prote 22.4 4.9E+02 0.017 24.4 18.3 93 234-332 510-615 (615)
185 3no2_A Uncharacterized protein 21.5 3.7E+02 0.013 22.7 11.1 111 218-339 47-163 (276)
186 3o4h_A Acylamino-acid-releasin 21.3 5.2E+02 0.018 24.4 11.3 109 214-335 116-231 (582)
187 4ery_A WD repeat-containing pr 21.0 3.7E+02 0.013 22.6 19.3 193 111-337 80-274 (312)
188 2aq5_A Coronin-1A; WD40 repeat 20.7 4.4E+02 0.015 23.3 21.8 95 234-333 154-256 (402)
189 4a2l_A BT_4663, two-component 20.5 6.4E+02 0.022 25.1 20.9 203 107-338 271-487 (795)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.11 E-value=3.7e-11 Score=79.73 Aligned_cols=46 Identities=28% Similarity=0.492 Sum_probs=39.2
Q ss_pred cCCccCCCCHHHHHHHHhcCChhhhhhhhccchhhhcccCChhhHH
Q 038747 6 DVDSSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFIS 51 (401)
Q Consensus 6 ~~~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~~~F~~ 51 (401)
....+..||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3456889999999999999999999999999999999999988743
No 2
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.11 E-value=3.3e-11 Score=108.50 Aligned_cols=51 Identities=25% Similarity=0.468 Sum_probs=47.7
Q ss_pred CCccCCCCHHHHHHHHhcCChhhhh-hhhccchhhhcccCChhhHHhhhhcC
Q 038747 7 VDSSMLMPEDVRLEILSRLPVKSLM-RLRCVCKSWYALIENPKFISKHLENF 57 (401)
Q Consensus 7 ~~~~~~LP~Dll~~IL~rLP~~sl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 57 (401)
+..+..||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.+..+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4567899999999999999999999 99999999999999999999998776
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.03 E-value=1.2e-07 Score=87.05 Aligned_cols=196 Identities=13% Similarity=0.091 Sum_probs=124.1
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccccC
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVSK 198 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 198 (401)
.++++||.|++|..+|+++..+ ...... .++ . +++.++...... ....+++|+..+++|+.+.
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~--~~~----~-~iyv~GG~~~~~-----~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPR-----NRIGVG--VID----G-HIYAVGGSHGCI-----HHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-----BTCEEE--EET----T-EEEEECCEETTE-----ECCCEEEEETTTTEEEECC
T ss_pred eEEEECCCCCeEeECCCCCcCc-----cccEEE--EEC----C-EEEEEcCCCCCc-----ccccEEEECCCCCeEeECC
Confidence 6899999999999999876531 111111 111 1 466655322211 2457999999999999886
Q ss_pred CCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee-cC
Q 038747 199 GNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF-DK 276 (401)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~-~~ 276 (401)
.. |.. ......+.++|.+|-+...........+..||+.+++|..++ +|... ......+.+++|.++.- ..
T Consensus 154 ~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 154 PM----LTR-RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR--SGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp CC----SSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBCS
T ss_pred CC----Ccc-ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc--ccceEEEECCEEEEEeCCCC
Confidence 43 221 122367788999998865432222467999999999999984 34322 12236777999887762 12
Q ss_pred CCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEEeec
Q 038747 277 SSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 277 ~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~ 340 (401)
....-++|+++- ..|.++..+. .+ ....-++.-+++|++..+ ...+..||+++++|+.+...
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~p-~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 296 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPMK-HR-RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRM 296 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCCS-SC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC
T ss_pred CCccceEEEEeCCCCcEEECCCCC-CC-ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCC
Confidence 222345777765 8999865322 12 122223334778877743 34689999999999998655
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.99 E-value=8e-08 Score=88.13 Aligned_cols=210 Identities=10% Similarity=0.052 Sum_probs=130.6
Q ss_pred ccccceEEEeeC------CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCC
Q 038747 106 GPYDGIFCLCDD------SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPY 179 (401)
Q Consensus 106 ~s~~GLl~~~~~------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (401)
...+|.|.+..+ ..+.++||.|++|..+|+++..+ ...... .+ +=+++.++..... ..
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~--~~-----~~~iyv~GG~~~~----~~ 115 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-----DSLAAC--AA-----EGKIYTSGGSEVG----NS 115 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-----BSCEEE--EE-----TTEEEEECCBBTT----BS
T ss_pred EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-----cceeEE--EE-----CCEEEEECCCCCC----Cc
Confidence 345666655532 47899999999999998876531 111111 11 1245555432111 12
Q ss_pred CcceEEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCC----ccEEEEEEcCCceEeEec-CCCC
Q 038747 180 EHSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDH----SNIMLSFHISDEEFREIE-RPRI 254 (401)
Q Consensus 180 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~----~~~Il~fD~~~e~~~~i~-lP~~ 254 (401)
....+++|+..+++|+.+... |.. ......+.++|.+|.+........ ...+..||+.+++|..++ +|..
T Consensus 116 ~~~~~~~~d~~~~~W~~~~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 190 (306)
T 3ii7_A 116 ALYLFECYDTRTESWHTKPSM----LTQ-RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA 190 (306)
T ss_dssp CCCCEEEEETTTTEEEEECCC----SSC-CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC
T ss_pred EeeeEEEEeCCCCceEeCCCC----cCC-cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch
Confidence 356799999999999988643 221 122366788999999875432211 467999999999999985 3432
Q ss_pred CCCCCceeEEEcCeEEEEee-cCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEE
Q 038747 255 PYSSHESLGLFNNSVSLLHF-DKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLL 325 (401)
Q Consensus 255 ~~~~~~~l~~~~g~L~~~~~-~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~ 325 (401)
. ....+.+.+|+|.++.- ......-++|+++- ..|..+..+ |.+ ....-++.-++.|++..+ ...+.
T Consensus 191 r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 266 (306)
T 3ii7_A 191 R--KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWK-GVTVKCAAVGSIVYVLAGFQGVGRLGHIL 266 (306)
T ss_dssp C--BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCC-BSCCEEEEETTEEEEEECBCSSSBCCEEE
T ss_pred h--hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCC-ccceeEEEECCEEEEEeCcCCCeeeeeEE
Confidence 2 22236777899887651 11112235777765 889986432 222 122222333778877743 24699
Q ss_pred EEECCCCcEEEEeec
Q 038747 326 LYDLIVEEVRDLGRF 340 (401)
Q Consensus 326 ~yd~~t~~~~~v~~~ 340 (401)
.||+++++|+.+...
T Consensus 267 ~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 267 EYNTETDKWVANSKV 281 (306)
T ss_dssp EEETTTTEEEEEEEE
T ss_pred EEcCCCCeEEeCCCc
Confidence 999999999998655
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.96 E-value=1.7e-07 Score=85.73 Aligned_cols=209 Identities=11% Similarity=0.082 Sum_probs=129.3
Q ss_pred ccccceEEEeeC-------CceEEEcccccc---ccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEecccc
Q 038747 106 GPYDGIFCLCDD-------SLIFLWNPATKE---CRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQI 175 (401)
Q Consensus 106 ~s~~GLl~~~~~-------~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 175 (401)
...+|.|.+..+ ..++++||.|++ |..+|+++..+ ...... .+ +. +++.++.....
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r-----~~~~~~--~~----~~-~lyv~GG~~~~-- 124 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR-----GLAGAT--TL----GD-MIYVSGGFDGS-- 124 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC-----BSCEEE--EE----TT-EEEEECCBCSS--
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc-----cceeEE--EE----CC-EEEEEcccCCC--
Confidence 344566655432 378999999999 99998876531 111111 11 12 45555432211
Q ss_pred CCCCCcceEEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCC
Q 038747 176 EAPYEHSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRI 254 (401)
Q Consensus 176 ~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~ 254 (401)
.....+++|+..+++|+.+... |.. ......+.++|.+|.+...........+..||+.+.+|..+. +|..
T Consensus 125 ---~~~~~~~~~d~~~~~W~~~~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 196 (301)
T 2vpj_A 125 ---RRHTSMERYDPNIDQWSMLGDM----QTA-REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK 196 (301)
T ss_dssp ---CBCCEEEEEETTTTEEEEEEEC----SSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred ---cccceEEEEcCCCCeEEECCCC----CCC-cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc
Confidence 1245799999999999987643 221 123467788999998865432223467999999999999984 3443
Q ss_pred CCCCCceeEEEcCeEEEEeec-CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeC------CeEE
Q 038747 255 PYSSHESLGLFNNSVSLLHFD-KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDN------GTLL 325 (401)
Q Consensus 255 ~~~~~~~l~~~~g~L~~~~~~-~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~------~~l~ 325 (401)
.. ...+.+.+++|.++.-. .....-++|+.+- ..|.++..+ |.+ .....++.-++.|++..+. ..+.
T Consensus 197 r~--~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 272 (301)
T 2vpj_A 197 RS--GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTP-RCYVGATVLRGRLYAIAGYDGNSLLSSIE 272 (301)
T ss_dssp CB--SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEECCBCSSSBEEEEE
T ss_pred cc--cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCc-ccceeEEEECCEEEEEcCcCCCcccccEE
Confidence 21 22367789998877521 1111345666665 899987532 222 1222233337788777431 3689
Q ss_pred EEECCCCcEEEEeec
Q 038747 326 LYDLIVEEVRDLGRF 340 (401)
Q Consensus 326 ~yd~~t~~~~~v~~~ 340 (401)
.||+++++|+.+...
T Consensus 273 ~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 273 CYDPIIDSWEVVTSM 287 (301)
T ss_dssp EEETTTTEEEEEEEE
T ss_pred EEcCCCCeEEEcCCC
Confidence 999999999998654
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.95 E-value=2.1e-07 Score=85.78 Aligned_cols=198 Identities=12% Similarity=0.044 Sum_probs=124.7
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccccC
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVSK 198 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 198 (401)
.++++||.|++|..+|+++..+ ....... + +. +++.++...... .......+++|+..+++|+.+.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~--~----~~-~lyv~GG~~~~~--~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR-----CLFGLGE--A----LN-SIYVVGGREIKD--GERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE-----ESCEEEE--E----TT-EEEEECCEESST--TCCBCCCEEEEETTTTEEEECC
T ss_pred ceEEecCCCCeEEECCCCCcch-----hceeEEE--E----CC-EEEEEeCCcCCC--CCcccceEEEECCCCCcEeECC
Confidence 3889999999999998877531 1111111 1 12 566655422100 0123567999999999999886
Q ss_pred CCCcccceeeeCCCceeEECceEEEEEeec-CCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee-c
Q 038747 199 GNVEWIPYDFKSHFKSTNLNGVFYWLVSRD-DGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF-D 275 (401)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~-~ 275 (401)
.. |.. ......+.++|.+|-+.... .......+..||+.+.+|..++ +|... ......+.+|+|.++.- .
T Consensus 134 ~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 134 PL----PYV-VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR--SLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp CC----SSC-CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEEEEEC
T ss_pred CC----CCc-ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch--hceEEEEECCEEEEEeccC
Confidence 43 221 12346788999999887652 1223468999999999999985 44422 12236778999887762 2
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeC---------------CeEEEEECCCCcEEEEe
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDN---------------GTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~---------------~~l~~yd~~t~~~~~v~ 338 (401)
.....-++|+.+- ..|..+..+ |.+ ....-++.-++.|++..+. ..+..||+++++|+.+.
T Consensus 207 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 207 DTGLTSSAEVYSITDNKWAPFEAF-PQE-RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SSSEEEEEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCCccceEEEEECCCCeEEECCCC-CCc-ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 2223446888876 899987532 222 2222233336777776331 24889999999999994
Q ss_pred e
Q 038747 339 R 339 (401)
Q Consensus 339 ~ 339 (401)
.
T Consensus 285 ~ 285 (315)
T 4asc_A 285 R 285 (315)
T ss_dssp S
T ss_pred c
Confidence 3
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.95 E-value=4.3e-07 Score=83.03 Aligned_cols=206 Identities=11% Similarity=0.099 Sum_probs=128.3
Q ss_pred cccceEEEeeC-------CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCC
Q 038747 107 PYDGIFCLCDD-------SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPY 179 (401)
Q Consensus 107 s~~GLl~~~~~-------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (401)
..+|.|.+..+ ..+.++||.|++|..+|+++..+. ..... .+ +. +++.++..... .
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~--~~----~~-~iyv~GG~~~~-----~ 121 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRS-----TLGAA--VL----NG-LLYAVGGFDGS-----T 121 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB-----SCEEE--EE----TT-EEEEEEEECSS-----C
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcccc-----ceEEE--EE----CC-EEEEEcCCCCC-----c
Confidence 44666655532 368999999999999998765321 11111 11 12 45555542211 1
Q ss_pred CcceEEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCC--CccEEEEEEcCCceEeEec-CCCCCC
Q 038747 180 EHSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGD--HSNIMLSFHISDEEFREIE-RPRIPY 256 (401)
Q Consensus 180 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~~~Il~fD~~~e~~~~i~-lP~~~~ 256 (401)
....+++|+..+++|+.+... |.. ......+.++|.+|-+....... ....+..||+.+++|..+. +|...
T Consensus 122 ~~~~~~~~d~~~~~W~~~~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r- 195 (302)
T 2xn4_A 122 GLSSVEAYNIKSNEWFHVAPM----NTR-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR- 195 (302)
T ss_dssp EEEEEEEEETTTTEEEEECCC----SSC-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-
T ss_pred cCceEEEEeCCCCeEeecCCC----CCc-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-
Confidence 245799999999999988643 221 12236678899999886543111 1357999999999999984 44322
Q ss_pred CCCceeEEEcCeEEEEeec-CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEE
Q 038747 257 SSHESLGLFNNSVSLLHFD-KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLY 327 (401)
Q Consensus 257 ~~~~~l~~~~g~L~~~~~~-~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~y 327 (401)
....+.+.+|+|.++.-. .....-++|+.+- ..|.++..+. .+ ....-.+.-++.|++..+ ...+..|
T Consensus 196 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y 272 (302)
T 2xn4_A 196 -SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MC-RRNAGVCAVNGLLYVVGGDDGSCNLASVEYY 272 (302)
T ss_dssp -BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEE
T ss_pred -ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-Cc-cccCeEEEECCEEEEECCcCCCcccccEEEE
Confidence 122367789998877521 1122235777765 8999865332 12 122223334778877743 2359999
Q ss_pred ECCCCcEEEEe
Q 038747 328 DLIVEEVRDLG 338 (401)
Q Consensus 328 d~~t~~~~~v~ 338 (401)
|+++++|+.+.
T Consensus 273 d~~~~~W~~~~ 283 (302)
T 2xn4_A 273 NPTTDKWTVVS 283 (302)
T ss_dssp ETTTTEEEECS
T ss_pred cCCCCeEEECC
Confidence 99999999986
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.94 E-value=4e-07 Score=83.99 Aligned_cols=194 Identities=12% Similarity=0.117 Sum_probs=122.0
Q ss_pred eEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccccCC
Q 038747 120 IFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVSKG 199 (401)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~ 199 (401)
++++||.|++|..+|+++..+. ..+.... +. +++.++...... ......+++|+..+++|+.+..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~--------~~~~~~~---~~-~iyv~GG~~~~~---~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARC--------LFGLGEV---DD-KIYVVAGKDLQT---EASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBC--------SCEEEEE---TT-EEEEEEEEBTTT---CCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCcccc--------ccceEEE---CC-EEEEEcCccCCC---CcccceEEEEeCCCCCEeECCC
Confidence 7899999999999988775321 1111111 12 455555432111 1124579999999999998864
Q ss_pred CCcccceeeeCCCceeEECceEEEEEeecC-CCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee-cC
Q 038747 200 NVEWIPYDFKSHFKSTNLNGVFYWLVSRDD-GDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF-DK 276 (401)
Q Consensus 200 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~-~~ 276 (401)
. |... .....+.++|.+|.+..... ......+..||+.+.+|..++ +|... ....+.+.+|+|.++.- ..
T Consensus 145 ~----p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~ 217 (318)
T 2woz_A 145 L----PIKV-YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTE 217 (318)
T ss_dssp C----SSCE-ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEET
T ss_pred C----CCcc-cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc--ccceEEEECCEEEEEcCcCC
Confidence 3 2211 22366779999998875421 122457999999999999985 34322 12236778999887762 12
Q ss_pred CCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee---------------CCeEEEEECCCCcEEEE
Q 038747 277 SSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD---------------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 277 ~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~---------------~~~l~~yd~~t~~~~~v 337 (401)
....-++|+.+- ..|.++..+ |.+ ....-++.-++.|++..+ ...+..||+++++|+++
T Consensus 218 ~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 218 DGLSASVEAFDLKTNKWEVMTEF-PQE-RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp TEEEEEEEEEETTTCCEEECCCC-SSC-CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCccceEEEEECCCCeEEECCCC-CCc-ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 223346777775 889986542 222 122223334678877632 24589999999999998
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.90 E-value=1e-06 Score=80.48 Aligned_cols=219 Identities=12% Similarity=0.093 Sum_probs=134.4
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCC---c
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDS---W 194 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~---W 194 (401)
..++++||.|++|..+|.++..+ ...... ..+ . +++.++..... .....+++|+..+++ |
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~--~~~----~-~l~v~GG~~~~-----~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKR-----RYVASV--SLH----D-RIYVIGGYDGR-----SRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC-----BSCEEE--EET----T-EEEEECCBCSS-----CBCCCEEEEETTCCTTCCC
T ss_pred eEEEEEcCCCCeEEeCCCCChhh-----ccccEE--EEC----C-EEEEEcCCCCC-----ccCceEEEEECCCCCCCee
Confidence 37899999999999998766531 111111 111 2 45555432111 134578999999999 9
Q ss_pred cccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEe
Q 038747 195 RVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLH 273 (401)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~ 273 (401)
+.+... |.. ......+.++|.+|.+...........+..||+.+.+|..++ +|... ......+.+|+|.++.
T Consensus 94 ~~~~~~----p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 94 YSVAPM----NVR-RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR--EGAGLVVASGVIYCLG 166 (301)
T ss_dssp EEECCC----SSC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC--BSCEEEEETTEEEEEC
T ss_pred EECCCC----CCC-ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc--ccceEEEECCEEEEEC
Confidence 988643 221 122367788999998865442222458999999999999984 45332 1223667789988775
Q ss_pred e-cCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEEeeccCCC
Q 038747 274 F-DKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDLGRFTRGT 344 (401)
Q Consensus 274 ~-~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~ 344 (401)
- ......-++|+.+- ..|+++..+ |.+ .....++.-++.|++..+ ...+..||+++++|+.+... ..
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~ 242 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPM-ATK-RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM--TT 242 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC--SS
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCC-Ccc-cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC--CC
Confidence 2 12222345677765 899987432 222 222233334778877743 24699999999999998754 22
Q ss_pred CCceEEEEEEecceeeCCCc
Q 038747 345 LGTAILTYCYKESLVRLKRV 364 (401)
Q Consensus 345 ~~~~~~~~~y~eslv~~~~~ 364 (401)
+.....++.+...+.-+.+.
T Consensus 243 ~r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 243 PRCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp CCBSCEEEEETTEEEEECCB
T ss_pred cccceeEEEECCEEEEEcCc
Confidence 22234455555555555543
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.84 E-value=1e-06 Score=80.73 Aligned_cols=219 Identities=9% Similarity=0.038 Sum_probs=134.0
Q ss_pred CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccc
Q 038747 117 DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRV 196 (401)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 196 (401)
...+.++||.+++|..+++++..+ ...... .+ +. +|+.++... . .....+++|+..+++|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~--~~----~~-~lyv~GG~~-~-----~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKR-----RDAACV--FW----DN-VVYILGGSQ-L-----FPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCC-----BSCEEE--EE----TT-EEEEECCBS-S-----SBCCEEEEEETTTTEEEE
T ss_pred CceEEEecCCCCCEecCCCCCccc-----ceeEEE--EE----CC-EEEEEeCCC-C-----CCcceEEEEeCCCCeEEE
Confidence 357899999999999998876531 111111 11 12 355554321 1 135689999999999998
Q ss_pred cCCCCcccceeeeCCCceeEECceEEEEEeec-CCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee
Q 038747 197 SKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRD-DGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF 274 (401)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~ 274 (401)
+... |.. ......+.++|.+|.+.... .......+..||+.+.+|..++ +|... .....++.+|+|.++.-
T Consensus 85 ~~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 85 KLGP----PTP-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR--CSHGMVEANGLIYVCGG 157 (306)
T ss_dssp EECC----SSC-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECC
T ss_pred CCCC----Ccc-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc--ceeEEEEECCEEEEECC
Confidence 8643 221 12236678899999887543 1223467999999999999984 44432 12236778998887651
Q ss_pred -cCCCC----eEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEEeecc
Q 038747 275 -DKSSH----YIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDLGRFT 341 (401)
Q Consensus 275 -~~~~~----~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~ 341 (401)
..... .-++|+.+- ..|.++..+ |.+ .....++.-++.|++..+ ...+..||+++++|+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~- 234 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPM-IEA-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM- 234 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCc-cch-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-
Confidence 11211 345677665 899987532 212 222333334778877632 24699999999999998654
Q ss_pred CCCCCceEEEEEEecceeeCCCc
Q 038747 342 RGTLGTAILTYCYKESLVRLKRV 364 (401)
Q Consensus 342 ~~~~~~~~~~~~y~eslv~~~~~ 364 (401)
..+.....+..+...+.-+++.
T Consensus 235 -p~~r~~~~~~~~~~~i~v~GG~ 256 (306)
T 3ii7_A 235 -PWKGVTVKCAAVGSIVYVLAGF 256 (306)
T ss_dssp -SCCBSCCEEEEETTEEEEEECB
T ss_pred -CCCccceeEEEECCEEEEEeCc
Confidence 2222234455555555555543
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.82 E-value=6.3e-07 Score=82.27 Aligned_cols=223 Identities=11% Similarity=0.079 Sum_probs=132.5
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcccc
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVS 197 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 197 (401)
..+.++||.|++|..+++++..+. ..... .. +. +|+.++...... ........+++|+..+++|+.+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~--~~----~~-~lyv~GG~~~~~-~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRS-----GLAGC--VV----GG-LLYAVGGRNNSP-DGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB-----SCEEE--EE----TT-EEEEECCEEEET-TEEEECCCEEEEETTTTEEEEC
T ss_pred ceEEEEcCCCCeEeECCCCCcccc-----cceEE--EE----CC-EEEEECCCcCCC-CCCeecceEEEECCCCCeEeEC
Confidence 478999999999999987765321 11111 11 12 455554321000 0001245689999999999988
Q ss_pred CCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee-c
Q 038747 198 KGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF-D 275 (401)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~-~ 275 (401)
... |.. ......+.++|.+|.+...........+..||+.+.+|..++ +|.... .....+.+++|.++.- .
T Consensus 106 ~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 106 APM----SVP-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI--GVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp CCC----SSC-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB--SCEEEEETTEEEEECCBC
T ss_pred CCC----CcC-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc--ceEEEEECCEEEEEeCCC
Confidence 643 221 122366788999998865431112357899999999999984 444322 2236677899887752 1
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEEeeccCCCCCc
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDLGRFTRGTLGT 347 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~~~~ 347 (401)
.....-++|+.+- ..|.++..+ |.+ ....-++.-++.|++..+ ...+..||+++++|+.+... ..+..
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~r~ 254 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAM-NTI-RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM--KHRRS 254 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCC-SSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC--SSCCB
T ss_pred CCCcCceEEEEeCCCCeEeeCCCC-CCc-cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC--CCCcc
Confidence 1222335666665 899986432 222 122222333778877743 24699999999999998754 22222
Q ss_pred eEEEEEEecceeeCCCc
Q 038747 348 AILTYCYKESLVRLKRV 364 (401)
Q Consensus 348 ~~~~~~y~eslv~~~~~ 364 (401)
...+..+...+.-+.+.
T Consensus 255 ~~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 255 ALGITVHQGRIYVLGGY 271 (308)
T ss_dssp SCEEEEETTEEEEECCB
T ss_pred ceEEEEECCEEEEEcCc
Confidence 34455555555555543
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.81 E-value=1.8e-06 Score=78.89 Aligned_cols=219 Identities=11% Similarity=0.064 Sum_probs=133.1
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcccc
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVS 197 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 197 (401)
..+.++||.+++|..+++++..+ ...... .+ +=+|+.++..... .....+++|+..+++|+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~--~~-----~~~lyv~GG~~~~-----~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRR-----CRAGMV--YM-----AGLVFAVGGFNGS-----LRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC-----BSCEEE--EE-----TTEEEEESCBCSS-----SBCCCEEEEETTTTEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCccc-----ccceEE--EE-----CCEEEEEeCcCCC-----ccccceEEECCCCCceeeC
Confidence 46889999999999998776531 111111 11 1245555432111 1245789999999999998
Q ss_pred CCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEee-c
Q 038747 198 KGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHF-D 275 (401)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~-~ 275 (401)
... |.. ......+.++|.+|-+...........+..||+.+.+|..++ +|... ......+.+|+|.++.- .
T Consensus 93 ~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 93 ANM----RDR-RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR--SSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp CCC----SSC-CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCEE
T ss_pred CCC----Ccc-ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc--cCceEEEECCEEEEEeCCC
Confidence 753 221 122366788999998876542223357899999999999984 34322 12236778899887651 1
Q ss_pred CCC--CeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEEeeccCCCC
Q 038747 276 KSS--HYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDLGRFTRGTL 345 (401)
Q Consensus 276 ~~~--~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~~ 345 (401)
... ..-++|+.+- ..|.++..+ |.+ ....-++.-++.|++..+ ...+..||+++++|+.+... ..+
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~ 241 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEM-STR-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM--NMC 241 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC--SSC
T ss_pred CCCCccccEEEEEeCCCCcEEECCCC-ccc-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC--CCc
Confidence 111 1234666665 899987432 222 222233334778877743 24699999999999998755 222
Q ss_pred CceEEEEEEecceeeCCCc
Q 038747 346 GTAILTYCYKESLVRLKRV 364 (401)
Q Consensus 346 ~~~~~~~~y~eslv~~~~~ 364 (401)
.....++.+...+.-+.+.
T Consensus 242 r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 242 RRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp CBSCEEEEETTEEEEECCB
T ss_pred cccCeEEEECCEEEEECCc
Confidence 2233455555555555543
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.73 E-value=1.3e-06 Score=81.88 Aligned_cols=239 Identities=11% Similarity=0.075 Sum_probs=133.9
Q ss_pred cccceEEEee---CCceEEEccc--cccccccCCCC-CCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCC
Q 038747 107 PYDGIFCLCD---DSLIFLWNPA--TKECRTLPNYS-NFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYE 180 (401)
Q Consensus 107 s~~GLl~~~~---~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 180 (401)
..+|.|.+.. ...++++||. +++|..+|+++ ..+ ...... .++ . +|+.++............
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R-----~~~~~~--~~~----~-~lyv~GG~~~~~~~~~~~ 84 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR-----DQATSA--FID----G-NLYVFGGIGKNSEGLTQV 84 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC-----BSCEEE--EET----T-EEEEECCEEECTTSCEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC-----ccceEE--EEC----C-EEEEEcCCCCCCCcccee
Confidence 3366665553 3589999998 49999998876 321 111111 121 1 455555431100000112
Q ss_pred cceEEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCC------------------------------
Q 038747 181 HSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDG------------------------------ 230 (401)
Q Consensus 181 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~------------------------------ 230 (401)
...+++|+..+++|+.+...+ |.. ......+.++|.+|.+......
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~---p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHA---PMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCC---SSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred eccEEEEeCCCCcEEECCCCC---Ccc-cccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 457899999999999987542 111 1222456799999988753210
Q ss_pred ----CCccEEEEEEcCCceEeEe-cCCCCCCCCCceeEEEcCeEEEEee--cCCCCeEEEEEEc---C-CcEEEEEEEcC
Q 038747 231 ----DHSNIMLSFHISDEEFREI-ERPRIPYSSHESLGLFNNSVSLLHF--DKSSHYIDIWLMS---D-MNWIQQFAIGP 299 (401)
Q Consensus 231 ----~~~~~Il~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~~~~~--~~~~~~l~IW~l~---~-~~W~~~~~i~~ 299 (401)
.....+..||+.+.+|..+ ++|..... ...+++.+++|.++.- ......-++|.++ + ..|.++..+..
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~ 239 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA-GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS 239 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCCB-SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCcc-cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC
Confidence 0125899999999999998 35543221 1236778888887651 1111234567664 2 88998654321
Q ss_pred CCCcccceEEeeCCEEEEEeeC-----------------------CeEEEEECCCCcEEEEeeccCCCCCceEEEEEEec
Q 038747 300 FLGVMSPRGIWKNNAVLMESDN-----------------------GTLLLYDLIVEEVRDLGRFTRGTLGTAILTYCYKE 356 (401)
Q Consensus 300 ~~~~~~p~~~~~~~~il~~~~~-----------------------~~l~~yd~~t~~~~~v~~~~~~~~~~~~~~~~y~e 356 (401)
........++.-++.|++..+. ..+..||+++++|+.+... ..+.....++.+..
T Consensus 240 ~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 240 PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL--SQGRAYGVSLPWNN 317 (357)
T ss_dssp TTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC--SSCCBSSEEEEETT
T ss_pred CcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC--CCCcccceeEEeCC
Confidence 1111222234447788777431 2478999999999998765 22321234444555
Q ss_pred ceeeCCCc
Q 038747 357 SLVRLKRV 364 (401)
Q Consensus 357 slv~~~~~ 364 (401)
.+.-+++.
T Consensus 318 ~i~v~GG~ 325 (357)
T 2uvk_A 318 SLLIIGGE 325 (357)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeee
Confidence 55555443
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.73 E-value=5.3e-06 Score=76.23 Aligned_cols=230 Identities=9% Similarity=0.125 Sum_probs=131.0
Q ss_pred eEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEecc-ccCCCCCcceEEEEEc
Q 038747 111 IFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNE-QIEAPYEHSLVAIYTS 189 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~-~~~~~~~~~~~~vyss 189 (401)
+|++..+..+.++||.|++|.. ++++...+. ...+... . +. +|+.++..... ..........+.+|+.
T Consensus 6 ~l~~~GG~~~~~yd~~~~~W~~-~~~~~p~~r------~~~~~~~--~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 6 LIFMISEEGAVAYDPAANECYC-ASLSSQVPK------NHVSLVT--K-EN-QVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEETTEEEEEETTTTEEEE-EECCCCSCS------SEEEEEC--T-TC-CEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred EEEEEcCCceEEECCCCCeEec-CCCCCCCCc------cceEEEE--E-CC-EEEEEcCcccCCCCCccccccceEEecC
Confidence 3444445789999999999986 333321111 1111111 1 12 34444432111 0000111234899999
Q ss_pred CCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecC---CCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEE
Q 038747 190 TTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDD---GDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLF 265 (401)
Q Consensus 190 ~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~ 265 (401)
.+++|+.+... |.. ......+.++|.+|.+..... ......+..||+.+.+|..++ +|... .....++.
T Consensus 75 ~~~~W~~~~~~----p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~ 147 (315)
T 4asc_A 75 LDSEWLGMPPL----PSP-RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSH 147 (315)
T ss_dssp TTTEEEECCCB----SSC-EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEE
T ss_pred CCCeEEECCCC----Ccc-hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEE
Confidence 99999987643 221 122367788999999876421 223467999999999999984 45432 22236778
Q ss_pred cCeEEEEeec--CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeC------CeEEEEECCCCcEE
Q 038747 266 NNSVSLLHFD--KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDN------GTLLLYDLIVEEVR 335 (401)
Q Consensus 266 ~g~L~~~~~~--~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~------~~l~~yd~~t~~~~ 335 (401)
+|+|.++.-. .....-++|+.+- ..|.++..+ |.+ ....-++.-++.|++..+. ..+..||+++++|+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 9998877621 2222346777765 889986532 222 2222333347788776431 25899999999999
Q ss_pred EEeeccCCCCCceEEEEEEecceeeCC
Q 038747 336 DLGRFTRGTLGTAILTYCYKESLVRLK 362 (401)
Q Consensus 336 ~v~~~~~~~~~~~~~~~~y~eslv~~~ 362 (401)
.+... ..+.....+..+...|.-+.
T Consensus 226 ~~~~~--p~~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 226 PFEAF--PQERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp EECCC--SSCCBSCEEEEETTEEEEEE
T ss_pred ECCCC--CCcccceeEEEECCEEEEEC
Confidence 98754 22221233444444444443
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.68 E-value=6.9e-06 Score=75.56 Aligned_cols=234 Identities=12% Similarity=0.161 Sum_probs=134.5
Q ss_pred cceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCC-CCCcceEEEE
Q 038747 109 DGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEA-PYEHSLVAIY 187 (401)
Q Consensus 109 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~-~~~~~~~~vy 187 (401)
++.|++..+....++||.|++|...|.+ ...+.. . .+... . +=+|+.++......... ......+++|
T Consensus 15 ~~~i~~~GG~~~~~yd~~~~~W~~~~~~-~~~~r~----~--~~~~~--~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDTAAVAYDPMENECYLTALA-EQIPRN----H--SSIVT--Q--QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSSEEEEEETTTTEEEEEEEC-TTSCSS----E--EEEEC--S--SSCEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhccccceEEECCCCCceecccCC-ccCCcc----c--eEEEE--E--CCEEEEECCcccCccccCCCccccEEEE
Confidence 4566666666789999999999984432 111110 1 11111 1 12344444311000000 0112348999
Q ss_pred EcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecC--CCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEE
Q 038747 188 TSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDD--GDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGL 264 (401)
Q Consensus 188 ss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~ 264 (401)
+..+++|+.+... |.. ......+.++|.+|.+..... ......+..||+.+.+|..+. +|.... ....++
T Consensus 84 d~~~~~W~~~~~~----p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~ 156 (318)
T 2woz_A 84 DNVSSEWVGLPPL----PSA-RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY--GHNVIS 156 (318)
T ss_dssp ETTTTEEEECSCB----SSC-BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE--SCEEEE
T ss_pred eCCCCcEEECCCC----Ccc-ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc--ccEEEE
Confidence 9999999988643 221 122367788999999876541 223367999999999999984 454322 222566
Q ss_pred EcCeEEEEee--cCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcE
Q 038747 265 FNNSVSLLHF--DKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEV 334 (401)
Q Consensus 265 ~~g~L~~~~~--~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~ 334 (401)
.+|+|.++.- ......-++|+.+- ..|.++..+ |.+ ....-++.-++.|++..+ ...+..||+++++|
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTP-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCC-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 8899887652 11222335777766 889987532 222 122222334678877643 13588999999999
Q ss_pred EEEeeccCCCCCceEEEEEEecceeeCCCc
Q 038747 335 RDLGRFTRGTLGTAILTYCYKESLVRLKRV 364 (401)
Q Consensus 335 ~~v~~~~~~~~~~~~~~~~y~eslv~~~~~ 364 (401)
+.+... ..+.....+..+...|.-+.+.
T Consensus 235 ~~~~~~--p~~r~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 235 EVMTEF--PQERSSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp EECCCC--SSCCBSCEEEEETTEEEEECCB
T ss_pred EECCCC--CCcccceEEEEECCEEEEECCe
Confidence 998655 2222234555566666665544
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.55 E-value=1e-05 Score=77.87 Aligned_cols=49 Identities=27% Similarity=0.440 Sum_probs=43.7
Q ss_pred CCccCCCCHHHHHHHHhcCChhhhhhhhccchhhhcccCChhhHHhhhh
Q 038747 7 VDSSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKHLE 55 (401)
Q Consensus 7 ~~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~ 55 (401)
.+....||+|++.+||+.|++++|+++.+|||+|+.++.++.+-+....
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~ 64 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCK 64 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHT
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhee
Confidence 4567789999999999999999999999999999999999887776543
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.54 E-value=0.00014 Score=70.14 Aligned_cols=42 Identities=19% Similarity=0.429 Sum_probs=37.8
Q ss_pred CccCCCCHHHHHHHHhcCChhhhhhhhccchhhhcccCC-hhh
Q 038747 8 DSSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIEN-PKF 49 (401)
Q Consensus 8 ~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~-~~F 49 (401)
+....||+|++.+||+.||+++|+++.+|||+|+.++.+ +..
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~ 55 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSL 55 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345679999999999999999999999999999999987 543
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.39 E-value=2.2e-05 Score=73.40 Aligned_cols=153 Identities=9% Similarity=0.050 Sum_probs=89.6
Q ss_pred ceEEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecC-CCCccEEEEEEc--CCceEeEec-CCCCCCC
Q 038747 182 SLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDD-GDHSNIMLSFHI--SDEEFREIE-RPRIPYS 257 (401)
Q Consensus 182 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~Il~fD~--~~e~~~~i~-lP~~~~~ 257 (401)
..+++|+..+++|+.+... |.........+.++|.+|.+..... +.....+..||+ .+.+|..+. +|.....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~----p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGES----PWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEEC----SSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCC----CCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 5899999999999988532 3211122467888999998864321 112346788887 899999874 3433222
Q ss_pred CCceeEEEcCeEEEEeec-C-----------------CCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEE
Q 038747 258 SHESLGLFNNSVSLLHFD-K-----------------SSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLM 317 (401)
Q Consensus 258 ~~~~l~~~~g~L~~~~~~-~-----------------~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~ 317 (401)
....+.+.+|+|.++.-. . .....++|+.+- ..|.++..+. .+ .....++.-+++|++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~-r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS-QG-RAYGVSLPWNNSLLI 321 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS-SC-CBSSEEEEETTEEEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC-CC-cccceeEEeCCEEEE
Confidence 222367889998876511 0 111245666655 8999976543 22 222334445788877
Q ss_pred EeeC-------CeEEEEECCCCcEEEEeec
Q 038747 318 ESDN-------GTLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 318 ~~~~-------~~l~~yd~~t~~~~~v~~~ 340 (401)
..+. ..+..++++++++.+....
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 6431 2588899999998776443
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.34 E-value=1.8e-05 Score=81.05 Aligned_cols=213 Identities=13% Similarity=0.081 Sum_probs=121.6
Q ss_pred ccceEEEeeC------CceEEEccccccccccC-CCCC-CCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCC
Q 038747 108 YDGIFCLCDD------SLIFLWNPATKECRTLP-NYSN-FLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPY 179 (401)
Q Consensus 108 ~~GLl~~~~~------~~~~V~NP~T~~~~~LP-~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (401)
.+|.|.+..+ ..++++||.|++|..++ +.+. ..+.. .. ..+...... + =+++.++...... .
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~---~hs~~~~~~-~-~~lyv~GG~~~~~----~ 465 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA-RM---CHTFTTISR-N-NQLLLIGGRKAPH----Q 465 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC-CB---SCEEEEETT-T-TEEEEECCBSSTT----C
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc-cc---ceEEEEEcc-C-CEEEEEcCCCCCC----C
Confidence 4555555433 36899999999999998 5221 00110 11 111111110 1 1355554321111 1
Q ss_pred CcceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE-CceEEEEEeecCCCCccEEEEEEcCCceEeEecC----CCC
Q 038747 180 EHSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL-NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIER----PRI 254 (401)
Q Consensus 180 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~l----P~~ 254 (401)
....+++|+..+++|+.+... |.. ......+.+ +|.+|.+.... +.. .+..||+.+.+|..+.. |..
T Consensus 466 ~~~dv~~yd~~t~~W~~~~~~----p~~-R~~h~~~~~~~~~iyv~GG~~-~~~--~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 466 GLSDNWIFDMKTREWSMIKSL----SHT-RFRHSACSLPDGNVLILGGVT-EGP--AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp BCCCCEEEETTTTEEEECCCC----SBC-CBSCEEEECTTSCEEEECCBC-SSC--SEEEEETTTTEEEECCCSSGGGGS
T ss_pred ccccEEEEeCCCCcEEECCCC----CCC-cccceEEEEcCCEEEEECCCC-CCC--CEEEEECCCCceEEccCCCCCCCc
Confidence 245689999999999998643 221 122345554 99999886544 111 79999999999999863 432
Q ss_pred CCCCCceeEEEc---CeEEEEeecC-C--CCeEEEEEEc--CCc------EEEEEEEcCCCCcccceEEeeCCEEEEEee
Q 038747 255 PYSSHESLGLFN---NSVSLLHFDK-S--SHYIDIWLMS--DMN------WIQQFAIGPFLGVMSPRGIWKNNAVLMESD 320 (401)
Q Consensus 255 ~~~~~~~l~~~~---g~L~~~~~~~-~--~~~l~IW~l~--~~~------W~~~~~i~~~~~~~~p~~~~~~~~il~~~~ 320 (401)
.... ..++++ |+|.++.... . ...-++|+.+ ... |.++....+.+.......+.+++.|++..+
T Consensus 538 r~~~--~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 538 SLVS--AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp CCBS--CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred ccce--eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 2211 134545 7787776211 1 1223455554 456 888766322222222334444488887743
Q ss_pred ---------CCeEEEEECCCCcEEEEeec
Q 038747 321 ---------NGTLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 321 ---------~~~l~~yd~~t~~~~~v~~~ 340 (401)
...+..||+++++|+.+.+.
T Consensus 616 ~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 616 TSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp BCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred ccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 24599999999999976554
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.34 E-value=3.3e-05 Score=74.13 Aligned_cols=48 Identities=31% Similarity=0.468 Sum_probs=41.3
Q ss_pred cCCccCCCCHH----HHHHHHhcCChhhhhhhhccchhhhcccCChhhHHhh
Q 038747 6 DVDSSMLMPED----VRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKH 53 (401)
Q Consensus 6 ~~~~~~~LP~D----ll~~IL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~ 53 (401)
..+....||+| |+.+||+.|++++|+++.+|||+|+.++.++.+-+..
T Consensus 7 ~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 58 (435)
T 1p22_A 7 QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKL 58 (435)
T ss_dssp CCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHH
T ss_pred hcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 34556779999 9999999999999999999999999999887655543
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.96 E-value=2.4e-06 Score=76.09 Aligned_cols=50 Identities=26% Similarity=0.301 Sum_probs=45.2
Q ss_pred ccCCCCHHHHHHHHhcCChhhhhhhhccchhhhcccCChhhHHhhhhcCC
Q 038747 9 SSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKHLENFN 58 (401)
Q Consensus 9 ~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~~ 58 (401)
.+..||+|++..||+.|++++|+++.+|||+||.+..++..-+.+..+..
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 46789999999999999999999999999999999999988887766643
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.61 E-value=0.0012 Score=67.11 Aligned_cols=196 Identities=12% Similarity=0.112 Sum_probs=108.7
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccccC
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVSK 198 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 198 (401)
.+.++||.|++|..++.++.... ....+..+.. +=+|+.++. . ....+++|+..++.|+.+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~------~~~~~~~~~~---~g~lyv~GG---~------~~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD------MFCPGISMDG---NGQIVVTGG---N------DAKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC------CSSCEEEECT---TSCEEEECS---S------STTCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCCCC------CccccccCCC---CCCEEEeCC---C------CCCceEEecCcCCceeECC
Confidence 57899999999999987654211 1111122111 124555542 1 1237999999999999886
Q ss_pred CCCcccceeeeCCCceeEE-CceEEEEEeecC-CCCccEEEEEEcCCceEeEec----CCCCCCCCCceeEEEcCeEEEE
Q 038747 199 GNVEWIPYDFKSHFKSTNL-NGVFYWLVSRDD-GDHSNIMLSFHISDEEFREIE----RPRIPYSSHESLGLFNNSVSLL 272 (401)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~-~~~~~~Il~fD~~~e~~~~i~----lP~~~~~~~~~l~~~~g~L~~~ 272 (401)
.. +.. +.....+.+ +|.+|-+..... +.....+-.||+.+.+|..++ .|....... .+...++++.++
T Consensus 282 ~~----~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~ 355 (656)
T 1k3i_A 282 DM----QVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLF 355 (656)
T ss_dssp CC----SSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEE
T ss_pred CC----Ccc-ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEE
Confidence 43 221 122345667 999998876321 122357899999999999973 121111111 122223333322
Q ss_pred ee-------cCCCCeEEEEEEcCCcEEEEEEEcCC-----CCcccceEE---eeCCEEEEEeeC---------C---eEE
Q 038747 273 HF-------DKSSHYIDIWLMSDMNWIQQFAIGPF-----LGVMSPRGI---WKNNAVLMESDN---------G---TLL 325 (401)
Q Consensus 273 ~~-------~~~~~~l~IW~l~~~~W~~~~~i~~~-----~~~~~p~~~---~~~~~il~~~~~---------~---~l~ 325 (401)
.. ......+..|-.+...|.......+. +.-....++ ..+++|++..+. . .+.
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 20 12234555555555777654332221 000111222 137888887541 1 588
Q ss_pred EEECCCCcEEEEe
Q 038747 326 LYDLIVEEVRDLG 338 (401)
Q Consensus 326 ~yd~~t~~~~~v~ 338 (401)
.||+++++|..+.
T Consensus 436 ~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 436 LGEPGTSPNTVFA 448 (656)
T ss_dssp CCSTTSCCEEEEC
T ss_pred cCCCCCCCeeEEc
Confidence 9999999999886
No 23
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.61 E-value=2e-05 Score=73.00 Aligned_cols=44 Identities=30% Similarity=0.526 Sum_probs=38.9
Q ss_pred cCCccCCCCHHHHHHHHhcCChhhhhhhhccchhhhcccCChhh
Q 038747 6 DVDSSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKF 49 (401)
Q Consensus 6 ~~~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~~~F 49 (401)
....|..||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 34568999999999999999999999999999999999877654
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.37 E-value=0.0035 Score=64.05 Aligned_cols=178 Identities=9% Similarity=-0.008 Sum_probs=106.7
Q ss_pred cceEEEEEcCCCCccccC-CCC-cccceeeeCCCceeEE--CceEEEEEeecCCC-CccEEEEEEcCCceEeEec-CCCC
Q 038747 181 HSLVAIYTSTTDSWRVSK-GNV-EWIPYDFKSHFKSTNL--NGVFYWLVSRDDGD-HSNIMLSFHISDEEFREIE-RPRI 254 (401)
Q Consensus 181 ~~~~~vyss~t~~W~~~~-~~~-~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~-~~~~Il~fD~~~e~~~~i~-lP~~ 254 (401)
...+.+|+..+++|+.+. ..+ ..+|.. ......+.+ +|.+|-+....... ....+..||+.+.+|..+. +|..
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVA-RMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCC-CBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCcc-ccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC
Confidence 456899999999999886 311 112221 122367778 99999887654211 2356899999999999984 4432
Q ss_pred CCCCCceeEEE-cCeEEEEeecCCCCeEEEEEEcC--CcEEEEEEEc--CCCCcccceEE-eeC-CEEEEEeeC------
Q 038747 255 PYSSHESLGLF-NNSVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIG--PFLGVMSPRGI-WKN-NAVLMESDN------ 321 (401)
Q Consensus 255 ~~~~~~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~--~~~~~~~p~~~-~~~-~~il~~~~~------ 321 (401)
.. ....++. +|+|.++.-..... ++|+.+- ..|..+.... |.+.......+ ..+ +.|++..+.
T Consensus 490 R~--~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~ 565 (695)
T 2zwa_A 490 RF--RHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT 565 (695)
T ss_dssp CB--SCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC
T ss_pred cc--cceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe
Confidence 21 1224554 88888776222222 7777766 8999865422 21211222122 223 778777432
Q ss_pred --CeEEEEECCCCc------EEEEeeccCCCCCceEEEEEEe-cceeeCCCc
Q 038747 322 --GTLLLYDLIVEE------VRDLGRFTRGTLGTAILTYCYK-ESLVRLKRV 364 (401)
Q Consensus 322 --~~l~~yd~~t~~------~~~v~~~~~~~~~~~~~~~~y~-eslv~~~~~ 364 (401)
..+..||+++++ |+.+...+ ..+.....++.+. ..+.-+++.
T Consensus 566 ~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 566 VSDKAIIFKYDAENATEPITVIKKLQHP-LFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp BCCEEEEEEECTTCSSCCEEEEEEEECG-GGCCBSCEEEEEETTEEEEECCB
T ss_pred eeCcEEEEEccCCccccceEEEEcCCCC-CCCcccceEEEeCCCEEEEECCc
Confidence 459999999999 88876521 1122134556666 566665554
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.15 E-value=0.0073 Score=61.17 Aligned_cols=198 Identities=12% Similarity=0.013 Sum_probs=105.5
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccC-CCCCcceEEEEEcCCCCcccc
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIE-APYEHSLVAIYTSTTDSWRVS 197 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~-~~~~~~~~~vyss~t~~W~~~ 197 (401)
.+...+|.+++|..++++|... . +..+-+. +=||+.++........ .......+.+|+..+++|+.+
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~--------~--~~av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~ 234 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVP--------A--AAAIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR 234 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCC--------S--EEEEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC
T ss_pred ccccCCCCCCeeeeeccCCCCc--------e--eEEEEec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC
Confidence 3455689999999887765420 1 1111221 2255555432111100 011234689999999999987
Q ss_pred CCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEE-cCeEEEEee-
Q 038747 198 KGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLF-NNSVSLLHF- 274 (401)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~-~g~L~~~~~- 274 (401)
...+ .+.........+..+|.+|-..... ...+..||+.+.+|..++ +|.. .......++ +|++.++.-
T Consensus 235 ~~~~--~~~~~~~~~~~~~~~g~lyv~GG~~----~~~v~~yd~~t~~W~~~~~~~~~--R~~~s~~~~~dg~iyv~GG~ 306 (656)
T 1k3i_A 235 TVTV--TKHDMFCPGISMDGNGQIVVTGGND----AKKTSLYDSSSDSWIPGPDMQVA--RGYQSSATMSDGRVFTIGGS 306 (656)
T ss_dssp EEEE--CSCCCSSCEEEECTTSCEEEECSSS----TTCEEEEEGGGTEEEECCCCSSC--CSSCEEEECTTSCEEEECCC
T ss_pred cccC--CCCCCccccccCCCCCCEEEeCCCC----CCceEEecCcCCceeECCCCCcc--ccccceEEecCCeEEEEeCc
Confidence 5321 1111111112334689999876533 137999999999999874 3332 122236677 888887752
Q ss_pred cC---CCCeEEEEEEcCCcEEEEEEE--cCCC-C-c-------ccceEEe-eCCEEEEEeeCCeEEEEECCCCcEEE
Q 038747 275 DK---SSHYIDIWLMSDMNWIQQFAI--GPFL-G-V-------MSPRGIW-KNNAVLMESDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 275 ~~---~~~~l~IW~l~~~~W~~~~~i--~~~~-~-~-------~~p~~~~-~~~~il~~~~~~~l~~yd~~t~~~~~ 336 (401)
.. ....+++|-.+...|..+... .|.. . . .....+. .+|.++.......+..||++++++..
T Consensus 307 ~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 307 WSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp CCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred ccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 11 123455554444889986221 1111 0 0 0011111 13444333334578999999998754
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.13 E-value=0.00016 Score=72.35 Aligned_cols=37 Identities=30% Similarity=0.545 Sum_probs=29.4
Q ss_pred CCccCCCCHHHHHHHHhcCC-hhhhhhhhccchhhhcc
Q 038747 7 VDSSMLMPEDVRLEILSRLP-VKSLMRLRCVCKSWYAL 43 (401)
Q Consensus 7 ~~~~~~LP~Dll~~IL~rLP-~~sl~r~r~VcK~W~~l 43 (401)
.+.+..||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46788999999999999999 99999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.33 E-value=0.0013 Score=65.66 Aligned_cols=33 Identities=18% Similarity=0.463 Sum_probs=31.3
Q ss_pred CCCCHHHHHHHHhcC-Chhhhhhhhccchhhhcc
Q 038747 11 MLMPEDVRLEILSRL-PVKSLMRLRCVCKSWYAL 43 (401)
Q Consensus 11 ~~LP~Dll~~IL~rL-P~~sl~r~r~VcK~W~~l 43 (401)
..||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999887
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.23 E-value=3.8 Score=35.52 Aligned_cols=191 Identities=8% Similarity=-0.003 Sum_probs=92.8
Q ss_pred eeccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCc
Q 038747 104 LLGPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEH 181 (401)
Q Consensus 104 ~~~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (401)
+.-..+|.+.+.. ...++++|| +++...+..+... ....++..|+... +..... ..
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~--------~~~~~i~~~~~g~---l~v~~~----------~~ 161 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG--------SYPSFITLGSDNA---LWFTEN----------QN 161 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT--------CCEEEEEECTTSC---EEEEET----------TT
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC--------CCCceEEEcCCCC---EEEEeC----------CC
Confidence 3334467666654 458899999 7766544322110 1234566666432 222210 12
Q ss_pred ceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCC
Q 038747 182 SLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSH 259 (401)
Q Consensus 182 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~ 259 (401)
..+..|+. ++......... ... ...++.+ +|.+|+..... ..|..||. +.++..+.+|......
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~-~~~-----~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~~~~~~~~~~- 227 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPT-PAS-----GPVGITKGNDDALWFVEIIG-----NKIGRITT-SGEITEFKIPTPNARP- 227 (299)
T ss_dssp TEEEEECT-TCCEEEEECSS-TTC-----CEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEEECSSTTCCE-
T ss_pred CEEEEEcC-CCcEEEeeCCC-CCC-----cceeEEECCCCCEEEEccCC-----ceEEEECC-CCcEEEEECCCCCCCc-
Confidence 35666776 66554331110 000 0123433 47776544322 48999999 7777776666322111
Q ss_pred ceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEE
Q 038747 260 ESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 260 ~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 335 (401)
..+.. -+|.|.+.. .....+.+|-. ++.- ..+.+.........+++ ++|.+++....+.+..||+++++++
T Consensus 228 ~~i~~~~~g~l~v~~--~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 228 HAITAGAGIDLWFTE--WGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp EEEEECSTTCEEEEE--TTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred eeEEECCCCCEEEec--cCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 11333 245654443 33444555443 2221 12222111112233555 7888988876778999999988754
No 29
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.07 E-value=4.5 Score=37.59 Aligned_cols=197 Identities=9% Similarity=0.098 Sum_probs=92.9
Q ss_pred cccceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEE
Q 038747 107 PYDGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAI 186 (401)
Q Consensus 107 s~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (401)
|.+++|.+..+..++|||..|++...+-..... ......+.+.+. +.|-+ .+. ..-.+.+
T Consensus 114 S~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~-------~~~V~sv~fspd-g~~la--sgs----------~Dg~v~i 173 (420)
T 4gga_A 114 SSGNVLAVALDNSVYLWSASSGDILQLLQMEQP-------GEYISSVAWIKE-GNYLA--VGT----------SSAEVQL 173 (420)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCST-------TCCEEEEEECTT-SSEEE--EEE----------TTSCEEE
T ss_pred CCCCEEEEEeCCEEEEEECCCCCEEEEEEecCC-------CCcEEEEEECCC-CCEEE--EEE----------CCCeEEE
Confidence 567788777788999999999987654332211 023445666663 34433 221 1346888
Q ss_pred EEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEc
Q 038747 187 YTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFN 266 (401)
Q Consensus 187 yss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~ 266 (401)
|+..++.--..... +. .....+..+|.+-.....+ ..+..+|..........+...............
T Consensus 174 Wd~~~~~~~~~~~~--h~-----~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~ 241 (420)
T 4gga_A 174 WDVQQQKRLRNMTS--HS-----ARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 241 (420)
T ss_dssp EETTTTEEEEEECC--CS-----SCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEcCCCcEEEEEeC--CC-----CceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeEEecccccceeeeeecCC
Confidence 88877632111000 00 0112333444332222222 366677766544333222211111000011123
Q ss_pred CeEEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEee-CCEEEEE-e--eCCeEEEEECCCCcEEEE
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWK-NNAVLME-S--DNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~-~--~~~~l~~yd~~t~~~~~v 337 (401)
|...+.. .....+.||-... ..+...............+++.+ ++.++.. . .++.+..||+.+++....
T Consensus 242 g~~l~s~--~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 242 GRHLASG--GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp SSEEEEE--ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred CCeeeee--eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 3333222 3556788888765 22222222222121122234444 3344433 2 356788999988875443
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.84 E-value=6.8 Score=35.09 Aligned_cols=65 Identities=9% Similarity=0.149 Sum_probs=43.4
Q ss_pred CeEEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeC---CEEEEE-eeCCeEEEEECCCCc
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKN---NAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~---~~il~~-~~~~~l~~yd~~t~~ 333 (401)
+.+.+.. .....+.||-+.. ..|.....+........-+++.++ +.+++. ..++.+..||+++++
T Consensus 172 ~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 172 SRKFVTG--GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp TCEEEEE--ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCEEEEE--eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 4544443 3556899999976 567777766543333344666777 777665 457789999998863
No 31
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.40 E-value=8.6 Score=35.34 Aligned_cols=190 Identities=9% Similarity=0.074 Sum_probs=94.6
Q ss_pred ccceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEE
Q 038747 108 YDGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIY 187 (401)
Q Consensus 108 ~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vy 187 (401)
.+.++....+..+.|||..+++...+-..... .....+.+.+. +.+ ++... ..-.+.+|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--------~~v~~v~~s~~-~~~--l~~~~----------~dg~i~iw 161 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDES--------TYVASVKWSHD-GSF--LSVGL----------GNGLVDIY 161 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTT--------CCEEEEEECTT-SSE--EEEEE----------TTSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCC--------CCEEEEEECCC-CCE--EEEEC----------CCCeEEEE
Confidence 35566666778999999999887654333211 23445666663 333 22221 13367888
Q ss_pred EcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE-c
Q 038747 188 TSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF-N 266 (401)
Q Consensus 188 ss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~-~ 266 (401)
+..++.-...-.. +. ..-..+..+|.+......+ ..|..+|+....-....+....... ..+... +
T Consensus 162 d~~~~~~~~~~~~--~~-----~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~~ 228 (401)
T 4aez_A 162 DVESQTKLRTMAG--HQ-----ARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQGHSSEV-CGLAWRSD 228 (401)
T ss_dssp ETTTCCEEEEECC--CS-----SCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSSCE-EEEEECTT
T ss_pred ECcCCeEEEEecC--CC-----CceEEEEECCCEEEEEcCC-----CCEEEEecccCcceeeEEcCCCCCe-eEEEEcCC
Confidence 8877642211100 00 0112334455443333332 4888899874332221111111100 002221 3
Q ss_pred CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCC-EEEEEe---eCCeEEEEECCCCcEE
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNN-AVLMES---DNGTLLLYDLIVEEVR 335 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~-~il~~~---~~~~l~~yd~~t~~~~ 335 (401)
|.+.+.. .....+.||-+.... ....+.........+++.+++ .++... .++.+..||+.+++..
T Consensus 229 ~~~l~s~--~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 229 GLQLASG--GNDNVVQIWDARSSI--PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SSEEEEE--ETTSCEEEEETTCSS--EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCEEEEE--eCCCeEEEccCCCCC--ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 4443333 355679999887621 222333222223345666644 455544 3778999999887643
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.62 E-value=13 Score=33.22 Aligned_cols=141 Identities=15% Similarity=0.045 Sum_probs=80.2
Q ss_pred cceEEEEEcCCCCc-cccCCCCcccceeeeCCCceeE--ECceEEEEEeecCCCCccEEEEEEcCCceEe-EecCCCCCC
Q 038747 181 HSLVAIYTSTTDSW-RVSKGNVEWIPYDFKSHFKSTN--LNGVFYWLVSRDDGDHSNIMLSFHISDEEFR-EIERPRIPY 256 (401)
Q Consensus 181 ~~~~~vyss~t~~W-~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~-~i~lP~~~~ 256 (401)
.-.+.+++..|++- +.+... ..| ..+. -+|.+|...... ..|..+|+.+.+.. .++++....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~--~~p-------~~i~~~~~g~lyv~~~~~-----~~v~~iD~~t~~~~~~i~~g~~~~ 128 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGF--TSP-------RYIHFLSDEKAYVTQIWD-----YRIFIINPKTYEITGYIECPDMDM 128 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECC--SSE-------EEEEEEETTEEEEEEBSC-----SEEEEEETTTTEEEEEEECTTCCT
T ss_pred CCEEEEEECcccEEEEEcCCC--CCC-------cEEEEeCCCeEEEEECCC-----CeEEEEECCCCeEEEEEEcCCccc
Confidence 34788899888754 222111 112 2222 478887766222 38999999988765 466654111
Q ss_pred C--CCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEeeC-----------Ce
Q 038747 257 S--SHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDN-----------GT 323 (401)
Q Consensus 257 ~--~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~-----------~~ 323 (401)
. ....+...+++|.+... .....+.++-++.....+...+.. ...-+.+.++|++++.... +.
T Consensus 129 ~~~~p~~i~~~~~~lyv~~~-~~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 129 ESGSTEQMVQYGKYVYVNCW-SYQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp TTCBCCCEEEETTEEEEEEC-TTCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred cCCCcceEEEECCEEEEEcC-CCCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 0 11125556777766541 124555555444444443333322 1233677778998877543 57
Q ss_pred EEEEECCCCcEE-EEee
Q 038747 324 LLLYDLIVEEVR-DLGR 339 (401)
Q Consensus 324 l~~yd~~t~~~~-~v~~ 339 (401)
+..+|++++++. .+..
T Consensus 205 v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCeEEEEEec
Confidence 999999998876 4443
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.54 E-value=13 Score=37.79 Aligned_cols=58 Identities=10% Similarity=0.194 Sum_probs=39.9
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeC---CEEEEE-eeCCeEEEEECCCCc
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKN---NAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~---~~il~~-~~~~~l~~yd~~t~~ 333 (401)
.....+.||-+.. ..+.....+........-+++.++ +.+++. ..++.+..||+.+++
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 4567799999987 566766666543333344666677 777766 456789999998863
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.03 E-value=9.7 Score=34.61 Aligned_cols=111 Identities=13% Similarity=0.107 Sum_probs=62.3
Q ss_pred ceeEECceEEEEEeecCCCCccEEEEEEcCCceEe-EecCCCCCC-----C--CCceeEEEcCeEEEEeecCCCCeEEEE
Q 038747 213 KSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFR-EIERPRIPY-----S--SHESLGLFNNSVSLLHFDKSSHYIDIW 284 (401)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~-~i~lP~~~~-----~--~~~~l~~~~g~L~~~~~~~~~~~l~IW 284 (401)
.++..+|.+|.....+ .|.+||..+++.. ..+++.... . ........+|.+.+.. ....+..+
T Consensus 48 ~p~v~~~~v~~~~~~g------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~~g~l~a~ 118 (376)
T 3q7m_A 48 HPALADNVVYAADRAG------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS---EKAQVYAL 118 (376)
T ss_dssp CCEEETTEEEEECTTS------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE---TTSEEEEE
T ss_pred ccEEECCEEEEEcCCC------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc---CCCEEEEE
Confidence 6788999999766544 8999999765432 234433210 0 1112455566665543 22333333
Q ss_pred EEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEEE
Q 038747 285 LMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 285 ~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
-.+. ..|.... .. .....|+. .++.+++...++.++++|.++++..+-
T Consensus 119 d~~tG~~~W~~~~--~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 119 NTSDGTVAWQTKV--AG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp ETTTCCEEEEEEC--SS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEEeC--CC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 3332 4565422 21 11222332 367888877788999999999986554
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=86.69 E-value=15 Score=31.69 Aligned_cols=204 Identities=11% Similarity=0.117 Sum_probs=99.6
Q ss_pred eeccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCc
Q 038747 104 LLGPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEH 181 (401)
Q Consensus 104 ~~~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (401)
+.-+.+|-+.+.+ ...+.++||..+....++...... .......++.+++..+. ++.... . ..
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~----~~~~~p~~i~~~~~~g~--l~v~~~--~-------~~ 99 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD----SQLLYPNRVAVVRNSGD--IIVTER--S-------PT 99 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST----TCBSSEEEEEEETTTTE--EEEEEC--G-------GG
T ss_pred EEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc----ccccCceEEEEEcCCCe--EEEEcC--C-------CC
Confidence 3334456665553 457899998866555555422110 01123345666443332 222210 0 02
Q ss_pred ceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCC
Q 038747 182 SLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSH 259 (401)
Q Consensus 182 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~ 259 (401)
..+.+|+.....-+.........| .++.+ +|.+|...... ..|..||...+....+..+......
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~~~-------~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p- 166 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQHP-------RGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFP- 166 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCSCE-------EEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSE-
T ss_pred CEEEEECCCCcEEEEecCccCCCc-------eEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCc-
Confidence 356777743322121211100111 23333 57766543322 4899999877766666443221111
Q ss_pred ceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccc--eEEeeCCEEEEEee-CC-eEEEEECCCCcE
Q 038747 260 ESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSP--RGIWKNNAVLMESD-NG-TLLLYDLIVEEV 334 (401)
Q Consensus 260 ~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p--~~~~~~~~il~~~~-~~-~l~~yd~~t~~~ 334 (401)
..+... +|.|.+.. .....+.+|-.+ +... ..+........| +++.++|.+++... .+ .+..||.+.+.+
T Consensus 167 ~~i~~~~~g~l~v~~--~~~~~i~~~~~~-g~~~--~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 167 NGVVVNDKQEIFISD--NRAHCVKVFNYE-GQYL--RQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLI 241 (286)
T ss_dssp EEEEECSSSEEEEEE--GGGTEEEEEETT-CCEE--EEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEE
T ss_pred EEEEECCCCCEEEEE--CCCCEEEEEcCC-CCEE--EEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEE
Confidence 113332 46655443 345566666543 2222 223221112234 56666888888764 33 899999887777
Q ss_pred EEEeec
Q 038747 335 RDLGRF 340 (401)
Q Consensus 335 ~~v~~~ 340 (401)
+.+...
T Consensus 242 ~~~~~~ 247 (286)
T 1q7f_A 242 SALESK 247 (286)
T ss_dssp EEEEES
T ss_pred EEEccc
Confidence 776554
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.32 E-value=21 Score=30.63 Aligned_cols=188 Identities=11% Similarity=0.121 Sum_probs=93.1
Q ss_pred cccceEEEee---CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 107 PYDGIFCLCD---DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 107 s~~GLl~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
..+|.+.+.+ ...+.++|+..+....+..... ....++.+|+... ++.... ....
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g~---l~v~~~----------~~~~ 143 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---------QHPRGVTVDNKGR---IIVVEC----------KVMR 143 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---------SCEEEEEECTTSC---EEEEET----------TTTE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---------CCceEEEEeCCCC---EEEEEC----------CCCE
Confidence 4567666665 4688899965444444433211 1234666776432 322210 1335
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCce
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHES 261 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~ 261 (401)
+.+|+.....-+..... .... ...++.+ +|.+|...... ..|..||...+....+..+..... ...
T Consensus 144 i~~~~~~g~~~~~~~~~-~~~~-----~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~g~~~~-p~~ 211 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFGCS-KHLE-----FPNGVVVNDKQEIFISDNRA-----HCVKVFNYEGQYLRQIGGEGITNY-PIG 211 (286)
T ss_dssp EEEECTTSCEEEEEECT-TTCS-----SEEEEEECSSSEEEEEEGGG-----TEEEEEETTCCEEEEESCTTTSCS-EEE
T ss_pred EEEEcCCCCEEEEeCCC-CccC-----CcEEEEECCCCCEEEEECCC-----CEEEEEcCCCCEEEEEccCCccCC-CcE
Confidence 66776543322222110 0000 1133444 47876544322 489999998776666644321111 111
Q ss_pred eEE-EcCeEEEEeecCCCC-eEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCC
Q 038747 262 LGL-FNNSVSLLHFDKSSH-YIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIV 331 (401)
Q Consensus 262 l~~-~~g~L~~~~~~~~~~-~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t 331 (401)
+.. -+|.|.+.. .... .+.+|-.+ +.-..............-+++.++|.+++...++.+..|+...
T Consensus 212 i~~d~~G~l~v~~--~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 212 VGINSNGEILIAD--NHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEECTTCCEEEEE--CSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEECCCCCEEEEe--CCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 333 356665554 3333 67777532 3222222222111112236667789988887677888888754
No 37
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=81.62 E-value=29 Score=31.14 Aligned_cols=184 Identities=7% Similarity=0.037 Sum_probs=90.8
Q ss_pred eCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcc
Q 038747 116 DDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWR 195 (401)
Q Consensus 116 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 195 (401)
.+..+.|||..+++....-..... . .....+.+.|..+.+ ++... ..-.+.+|+..++..+
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h-----~--~~v~~~~~~~~~~~~--l~s~~----------~d~~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGP-----G--DAITGMKFNQFNTNQ--LFVSS----------IRGATTLRDFSGSVIQ 154 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCST-----T--CBEEEEEEETTEEEE--EEEEE----------TTTEEEEEETTSCEEE
T ss_pred CCCeEEEEeCCCcccceeeecCCc-----C--CceeEEEeCCCCCCE--EEEEe----------CCCEEEEEECCCCceE
Confidence 356889999988776644322110 1 234455555532222 22221 1346788888765544
Q ss_pred ccCCCCcc-cceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCce-eEE-EcCe-EEE
Q 038747 196 VSKGNVEW-IPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHES-LGL-FNNS-VSL 271 (401)
Q Consensus 196 ~~~~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~-l~~-~~g~-L~~ 271 (401)
........ .+.. .-...-+|........+ ..|..+|+..+....+..... ... +.. -+|. +.+
T Consensus 155 ~~~~~~~~~~~v~----~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 155 VFAKTDSWDYWYC----CVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEECCCCSSCCEE----EEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEE
T ss_pred EEeccCCCCCCeE----EEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEE
Confidence 33221000 0000 00111134333222222 488889987665555543221 111 222 2333 433
Q ss_pred EeecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEee-CCEEEEE-eeCCeEEEEECCCCcE
Q 038747 272 LHFDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWK-NNAVLME-SDNGTLLLYDLIVEEV 334 (401)
Q Consensus 272 ~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~-~~~~~l~~yd~~t~~~ 334 (401)
.. .....+.||-+.. ..-.....+.. .....-+.+.+ ++..++. ..++.+..||+++++.
T Consensus 222 s~--~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 222 TS--SVDATVKLWDLRNIKDKNSYIAEMPH-EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EE--ETTSEEEEEEGGGCCSTTCEEEEEEC-SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EE--eCCCEEEEEeCCCCCcccceEEEecC-CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 33 4567899999876 11222233322 22233466677 7776665 5578899999987653
No 38
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.85 E-value=19 Score=33.51 Aligned_cols=109 Identities=10% Similarity=0.129 Sum_probs=63.0
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCe-EEEEeecCCCCeEEEEEEcC-CcEE--E
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNS-VSLLHFDKSSHYIDIWLMSD-MNWI--Q 293 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~-L~~~~~~~~~~~l~IW~l~~-~~W~--~ 293 (401)
+|.+||..... ..|..+|+.+.....+...... .. ....-+|. |.+.. .... -.||+++. ..|. .
T Consensus 141 ~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~~~--~~-ia~~~~g~~l~~~d--~~~~-~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 141 NNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGFKG--GK-PAVTKDKQRVYSIG--WEGT-HTVYVYMKASGWAPTR 209 (409)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEEEEETCCB--CB-CEECTTSSEEEEEB--SSTT-CEEEEEEGGGTTCEEE
T ss_pred CCCEEEEecCC-----CcEEEEECCCCEEEEeeccCCC--Cc-eeEecCCCcEEEEe--cCCC-ceEEEEEcCCCceeEE
Confidence 68999886543 4899999998877665322111 11 11122333 33332 2222 16777776 4444 2
Q ss_pred EEEEcC-CCCcccceEEee-CCEEEEEeeCCeEEEEECCCCcEEEE
Q 038747 294 QFAIGP-FLGVMSPRGIWK-NNAVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 294 ~~~i~~-~~~~~~p~~~~~-~~~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
...+.+ ......-+++.+ +|.|++....+.+..||++++....+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 222222 111233477777 78888876677899999998887665
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=79.56 E-value=22 Score=31.46 Aligned_cols=103 Identities=6% Similarity=-0.030 Sum_probs=56.9
Q ss_pred cEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeC
Q 038747 234 NIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKN 312 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~ 312 (401)
-.+..+|..+.++..+.......... .+.. -+|+|.+.........+.+|-++.+.+..+..+........-+++.++
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~-~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPT-YLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCC-CEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcc-eEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence 36778888888877654322111111 1332 267754443223356788888876666665553221112223677788
Q ss_pred CEEEE-Ee-eCCeEEEEECC-CCcEEEE
Q 038747 313 NAVLM-ES-DNGTLLLYDLI-VEEVRDL 337 (401)
Q Consensus 313 ~~il~-~~-~~~~l~~yd~~-t~~~~~v 337 (401)
|+.++ .. .++.+..||+. +++.+.+
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 77544 44 45678999984 4555544
No 40
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=78.90 E-value=35 Score=30.38 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=59.0
Q ss_pred cEEEEEEcCCceEeEec-CCCCCCCCC--ceeEE-EcCeEEEEeecCC-CCeEEEEEEcC--CcEEEEEEEcCCCCcccc
Q 038747 234 NIMLSFHISDEEFREIE-RPRIPYSSH--ESLGL-FNNSVSLLHFDKS-SHYIDIWLMSD--MNWIQQFAIGPFLGVMSP 306 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~-lP~~~~~~~--~~l~~-~~g~L~~~~~~~~-~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p 306 (401)
..|..||+.+.++..+. ++....... ..+.. -+|+..++.. .. ...+.||.++. +.+..+..+.. .....-
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~-~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~ 310 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN-RLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRN 310 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-CSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-CCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCce
Confidence 37889998877765442 221111111 11222 2565432321 44 67899999973 67777666653 222334
Q ss_pred eEEeeCCEEEEE-e-eCCeEEE--EECCCCcEEEEe
Q 038747 307 RGIWKNNAVLME-S-DNGTLLL--YDLIVEEVRDLG 338 (401)
Q Consensus 307 ~~~~~~~~il~~-~-~~~~l~~--yd~~t~~~~~v~ 338 (401)
+++.++|+.++. . ..+.+.. +|.++++++.+.
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 677788875444 3 3455555 688899988775
No 41
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.51 E-value=32 Score=29.68 Aligned_cols=190 Identities=7% Similarity=0.019 Sum_probs=99.8
Q ss_pred CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccc
Q 038747 117 DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRV 196 (401)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 196 (401)
...++++||.++ ...+..+. ....++.+|+... ++.... ....+.+|+..++..+.
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~----------~~~~~l~~~~dg~---l~v~~~----------~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS----------HHQNGHCLNKQGH---LIACSH----------GLRRLERQREPGGEWES 104 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC----------SSEEEEEECTTCC---EEEEET----------TTTEEEEECSTTCCEEE
T ss_pred CCEEEEEECCCC-eEEEECCC----------CCcceeeECCCCc---EEEEec----------CCCeEEEEcCCCCcEEE
Confidence 458899999988 55443321 1234677777433 222210 13467888887777654
Q ss_pred cCCCCcccceeeeCCCceeEE--CceEEEEEee-c-----------CCCCccEEEEEEcCCceEeEecCCCCCCCCCcee
Q 038747 197 SKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSR-D-----------DGDHSNIMLSFHISDEEFREIERPRIPYSSHESL 262 (401)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~-~-----------~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l 262 (401)
........+ . .....+.+ +|.+|..... + .......|..+|.. .++..+.-.. ... ..+
T Consensus 105 ~~~~~~~~~--~-~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~-~gi 177 (296)
T 3e5z_A 105 IADSFEGKK--L-NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKP-NGL 177 (296)
T ss_dssp EECEETTEE--C-CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSE-EEE
T ss_pred EeeccCCCC--C-CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCC-ccE
Confidence 422100000 0 01122332 5777654210 0 00012478899887 5554442111 100 113
Q ss_pred EE-EcCeEEEEeecCCCCeEEEEEEcC-CcE-EEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEEEee
Q 038747 263 GL-FNNSVSLLHFDKSSHYIDIWLMSD-MNW-IQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 263 ~~-~~g~L~~~~~~~~~~~l~IW~l~~-~~W-~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~ 339 (401)
.. -+|++.+.. .....+.+|-++. +.. .....+........-+++.++|.+++.. .+.+..||++.+.++.+..
T Consensus 178 ~~s~dg~~lv~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 178 AFLPSGNLLVSD--TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp EECTTSCEEEEE--TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEe--CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEEC
Confidence 32 245543333 5566788888874 555 3333332111222346777789988877 7789999999777777765
Q ss_pred c
Q 038747 340 F 340 (401)
Q Consensus 340 ~ 340 (401)
.
T Consensus 255 ~ 255 (296)
T 3e5z_A 255 P 255 (296)
T ss_dssp S
T ss_pred C
Confidence 5
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=78.31 E-value=31 Score=29.43 Aligned_cols=108 Identities=10% Similarity=0.033 Sum_probs=58.0
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcC-CcEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSD-MNWIQQF 295 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~ 295 (401)
+|.+|+..... ..|..||.. .++..+.+|...... ..+.. -+|.|.+.. .....+ ++++. +.+. ..
T Consensus 30 ~g~l~v~~~~~-----~~v~~~~~~-~~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~--~~~~~v--~~~d~~g~~~-~~ 97 (300)
T 2qc5_A 30 DGKVWFTQHKA-----NKISSLDQS-GRIKEFEVPTPDAKV-MCLIVSSLGDIWFTE--NGANKI--GKLSKKGGFT-EY 97 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCE-EEEEECTTSCEEEEE--TTTTEE--EEECTTSCEE-EE
T ss_pred CCCEEEEcCCC-----CeEEEECCC-CceEEEECCCCCCcc-eeEEECCCCCEEEEe--cCCCeE--EEECCCCCeE-Ee
Confidence 57877655332 489999998 777777776432111 11333 245555443 233333 33333 4442 22
Q ss_pred EEcCCCCcccceEEeeCCEEEEEee-CCeEEEEECCCCcEEEEe
Q 038747 296 AIGPFLGVMSPRGIWKNNAVLMESD-NGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 296 ~i~~~~~~~~p~~~~~~~~il~~~~-~~~l~~yd~~t~~~~~v~ 338 (401)
.+........-+++.++|.+++... .+.+..||++ +++..+.
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc
Confidence 2221111122244556788888764 5689999998 6666554
No 43
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.23 E-value=41 Score=30.82 Aligned_cols=188 Identities=9% Similarity=-0.032 Sum_probs=95.6
Q ss_pred cceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEE
Q 038747 109 DGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYT 188 (401)
Q Consensus 109 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (401)
.+.|++.....+...++.+++...+-... ....++.+|+..+. |+... . ....+..++
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~----------~~~~gl~~d~~~~~--ly~~D---~-------~~~~I~r~~ 144 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNL----------ENAIALDFHHRREL--VFWSD---V-------TLDRILRAN 144 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSC----------SCEEEEEEETTTTE--EEEEE---T-------TTTEEEEEE
T ss_pred cceeEeecCccceeeccCCCcEEEEecCC----------CccEEEEEecCCCe--EEEEe---C-------CCCcEEEEe
Confidence 56677777677777787766554432211 23567888876552 22221 0 133566666
Q ss_pred cCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE
Q 038747 189 STTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF 265 (401)
Q Consensus 189 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~ 265 (401)
..++..+.+... .+. ...++.+ +|.+||..... ..|..+|+....-..+- ..... ....+.+-
T Consensus 145 ~~g~~~~~~~~~--~~~-----~p~glavd~~~g~lY~~d~~~-----~~I~~~~~dg~~~~~l~-~~~l~-~P~giavd 210 (386)
T 3v65_B 145 LNGSNVEEVVST--GLE-----SPGGLAVDWVHDKLYWTDSGT-----SRIEVANLDGAHRKVLL-WQSLE-KPRAIALH 210 (386)
T ss_dssp TTSCCEEEEECS--SCS-----CCCCEEEETTTTEEEEEETTT-----TEEEECBTTSCSCEEEE-CSSCS-CEEEEEEE
T ss_pred cCCCCcEEEEeC--CCC-----CccEEEEEeCCCeEEEEcCCC-----CeEEEEeCCCCceEEee-cCCCC-CCcEEEEE
Confidence 665544332211 110 1133333 68999986543 48889998765433321 11111 11114443
Q ss_pred --cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEe-eCCEEEEEe-eCCeEEEEECCCCcEEEEe
Q 038747 266 --NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIW-KNNAVLMES-DNGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 266 --~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~-~~~~il~~~-~~~~l~~yd~~t~~~~~v~ 338 (401)
+|.|.+.. ... .-.|++.+- +.-.+.. +. ..+..| +++. .++.|++.. ..+.+..+|+.....+.+-
T Consensus 211 p~~g~ly~td--~~~-~~~I~r~~~dG~~~~~~-~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 211 PMEGTIYWTD--WGN-TPRIEASSMDGSGRRII-AD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 284 (386)
T ss_dssp TTTTEEEEEE--CSS-SCEEEEEETTSCSCEEE-EC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE
T ss_pred cCCCeEEEec--cCC-CCEEEEEeCCCCCcEEE-EE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE
Confidence 56665443 222 234555543 2222211 11 123334 5555 367787764 4567999998766555443
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.92 E-value=39 Score=29.86 Aligned_cols=97 Identities=7% Similarity=0.061 Sum_probs=55.5
Q ss_pred cEEEEEEcCCceEeEec-CCCCCCCCCceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee
Q 038747 234 NIMLSFHISDEEFREIE-RPRIPYSSHESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK 311 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~ 311 (401)
..|..+|+.++++..+. ++...... ..+... +|.+.+.. .....+.||-++...+.....+........-+.+.+
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDSNRIVTC--GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCE-EEEEEETTTTEEEEE--ETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcc-cEEEEeCCCCEEEEE--cCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 37888888877643332 22111110 112222 45544433 356689999998877776665443332333456666
Q ss_pred CCEEEEE-eeCCeEEEEECCCCc
Q 038747 312 NNAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 312 ~~~il~~-~~~~~l~~yd~~t~~ 333 (401)
++..++. ..++.+..||+++++
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCEEEEEeCCCEEEEEEecCCC
Confidence 6765554 556789999988776
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=76.57 E-value=39 Score=30.42 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=59.5
Q ss_pred ceeEECceEEEEEeecCCCCccEEEEEEcCCceEe-EecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEc--C-
Q 038747 213 KSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFR-EIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMS--D- 288 (401)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~-~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~--~- 288 (401)
..+..+|.+|.....+ .|.+||..+++.. ..+++.... ......+|.+.+.. ... .|+.++ .
T Consensus 98 ~~~~~~~~v~v~~~~g------~l~a~d~~tG~~~W~~~~~~~~~---~~p~~~~~~v~v~~---~~g--~l~~~d~~tG 163 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKA------QVYALNTSDGTVAWQTKVAGEAL---SRPVVSDGLVLIHT---SNG--QLQALNEADG 163 (376)
T ss_dssp EEEEETTEEEEEETTS------EEEEEETTTCCEEEEEECSSCCC---SCCEEETTEEEEEC---TTS--EEEEEETTTC
T ss_pred CceEeCCEEEEEcCCC------EEEEEECCCCCEEEEEeCCCceE---cCCEEECCEEEEEc---CCC--eEEEEECCCC
Confidence 4566788888766544 8999999765532 234443221 11344466554332 222 334443 2
Q ss_pred -CcEEEEEEEcCC--CCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEEE
Q 038747 289 -MNWIQQFAIGPF--LGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 289 -~~W~~~~~i~~~--~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
..|.....-... .....|+. .++.+++...++.++++|+++++...-
T Consensus 164 ~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 164 AVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp CEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred cEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 446653321110 01123332 267777767778899999999987654
No 46
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=74.20 E-value=78 Score=32.00 Aligned_cols=195 Identities=12% Similarity=0.066 Sum_probs=92.9
Q ss_pred cceEEEee-CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEE
Q 038747 109 DGIFCLCD-DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIY 187 (401)
Q Consensus 109 ~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vy 187 (401)
+|-|.+.. ...++.+||.|+++..++..... ......+..|+.. + +.+.. ...+..|
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-------~~~v~~i~~d~~g---~-lwigt-----------~~Gl~~~ 474 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKFQIIELEKNE-------LLDVRVFYEDKNK---K-IWIGT-----------HAGVFVI 474 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEEEECCSTTTC-------CCCEEEEEECTTS---E-EEEEE-----------TTEEEEE
T ss_pred CCCEEEEeccCCEEEEcCCCCcEEEeccCCCC-------CCeEEEEEECCCC---C-EEEEE-----------CCceEEE
Confidence 34444433 24677778887777666532110 0122333334321 1 22221 2367788
Q ss_pred EcCCCCccccCCCC-cccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCce-eE
Q 038747 188 TSTTDSWRVSKGNV-EWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHES-LG 263 (401)
Q Consensus 188 ss~t~~W~~~~~~~-~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~-l~ 263 (401)
+..++.|+...... ...+. ..-.++.. +|.+ |++..+ ..|..||..++++..+..+......... +.
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~---~~i~~i~~d~~g~l-Wigt~~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 475 DLASKKVIHHYDTSNSQLLE---NFVRSIAQDSEGRF-WIGTFG-----GGVGIYTPDMQLVRKFNQYEGFCSNTINQIY 545 (781)
T ss_dssp ESSSSSCCEEECTTTSSCSC---SCEEEEEECTTCCE-EEEESS-----SCEEEECTTCCEEEEECTTTTCSCSCEEEEE
T ss_pred eCCCCeEEecccCccccccc---ceeEEEEEcCCCCE-EEEEcC-----CCEEEEeCCCCeEEEccCCCCCCCCeeEEEE
Confidence 88888887654321 00100 01122333 3554 555442 2688999999998887654322111111 22
Q ss_pred E-EcCeEEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCC-CcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEEEee
Q 038747 264 L-FNNSVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFL-GVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 264 ~-~~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~-~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~ 339 (401)
. .+|.|-+.+ . ..+ |...+. ..+.....-..++ ....-+...++|.|++.+..+ +..||+++++++....
T Consensus 546 ~d~~g~lWi~T--~--~Gl-v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G-l~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 546 RSSKGQMWLAT--G--EGL-VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG-ISCYITSKKCFYTYDH 619 (781)
T ss_dssp ECTTSCEEEEE--T--TEE-EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC-EEEEETTTTEEEEECG
T ss_pred ECCCCCEEEEE--C--CCc-eEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc-eEEEECCCCceEEecc
Confidence 2 234443322 1 112 022222 3322211101111 111223334578888887664 9999999999888754
Q ss_pred c
Q 038747 340 F 340 (401)
Q Consensus 340 ~ 340 (401)
.
T Consensus 620 ~ 620 (781)
T 3v9f_A 620 S 620 (781)
T ss_dssp G
T ss_pred c
Confidence 3
No 47
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=73.76 E-value=43 Score=28.85 Aligned_cols=194 Identities=6% Similarity=0.002 Sum_probs=92.8
Q ss_pred CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccc
Q 038747 117 DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRV 196 (401)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 196 (401)
...++++||.+++...+..+... + ......++.+|+..+. +..... ...+.+|+.. +..+.
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~---~--~~~~~~~i~~~~~~g~--l~v~~~-----------~~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVN---G--YGGIPAGCQCDRDANQ--LFVADM-----------RLGLLVVQTD-GTFEE 105 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEET---T--EECCEEEEEECSSSSE--EEEEET-----------TTEEEEEETT-SCEEE
T ss_pred CCEEEEEeCCCCcEEEEEecccC---C--CCCCCceEEEecCCCc--EEEEEC-----------CCCEEEEeCC-CCEEE
Confidence 45799999999887765431100 0 0123456667765232 222210 1256778777 65543
Q ss_pred c-CCCCcccceeeeCCCceeEE--CceEEEEEeec----------CCCCccEEEEEEcCCceEeEecCCCCCCCCCceeE
Q 038747 197 S-KGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRD----------DGDHSNIMLSFHISDEEFREIERPRIPYSSHESLG 263 (401)
Q Consensus 197 ~-~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~----------~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~ 263 (401)
. .......+. .....+.+ +|.+|+..... .......|..+|.. +++..+.-. .. ....+.
T Consensus 106 ~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~-~~~~i~ 178 (314)
T 1pjx_A 106 IAKKDSEGRRM---QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ-FPNGIA 178 (314)
T ss_dssp CCSBCTTSCBC---BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES-SEEEEE
T ss_pred EEeccCCCccc---cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CC-CcceEE
Confidence 3 211001110 11123433 57776554321 00012478899887 555443110 00 001133
Q ss_pred EE-----cC-eEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCC----CcccceEEeeCCEEEEEe-eCCeEEEEECCC
Q 038747 264 LF-----NN-SVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFL----GVMSPRGIWKNNAVLMES-DNGTLLLYDLIV 331 (401)
Q Consensus 264 ~~-----~g-~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~----~~~~p~~~~~~~~il~~~-~~~~l~~yd~~t 331 (401)
.. +| .|.+.. .....+.+|-++. +.......+.... ....-+++.++|.+++.. ..+.+..||+++
T Consensus 179 ~~~~~d~dg~~l~v~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EecccCCCCCEEEEEE--CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 32 33 243433 4456777777653 4443322221111 122235566688888875 466899999985
Q ss_pred Cc-EEEEe
Q 038747 332 EE-VRDLG 338 (401)
Q Consensus 332 ~~-~~~v~ 338 (401)
++ .+.+.
T Consensus 257 g~~~~~~~ 264 (314)
T 1pjx_A 257 GQPKMRIR 264 (314)
T ss_dssp BSCSEEEE
T ss_pred CcEeEEEe
Confidence 54 34443
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=73.22 E-value=46 Score=28.88 Aligned_cols=196 Identities=11% Similarity=0.098 Sum_probs=97.1
Q ss_pred cccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceE
Q 038747 107 PYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLV 184 (401)
Q Consensus 107 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (401)
..+|-|.+.+ ...++.++|.|++...+..+. ...++.+++..+ + ++.. ...+
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~-l-~v~~-------------~~~l 75 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG-Y-VATI-------------GTKF 75 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-----------CEEEEEEBTTSS-E-EEEE-------------TTEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----------ceEEEEECCCCC-E-EEEE-------------CCeE
Confidence 3345555554 458899999998765443221 233566676543 2 2221 2367
Q ss_pred EEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCC------CCccEEEEEEcCCceEeEe---cCCC
Q 038747 185 AIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDG------DHSNIMLSFHISDEEFREI---ERPR 253 (401)
Q Consensus 185 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~------~~~~~Il~fD~~~e~~~~i---~lP~ 253 (401)
.+|+..++.++.+.......+.. . ...+.+ +|.+|.-...... .....|..+|.....-... ..|.
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~--~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn 152 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNN--R-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISN 152 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSE--E-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEE
T ss_pred EEEECCCCcEEEEEecCCCCCCC--C-CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccccc
Confidence 78888888776543221111110 0 122333 5786654432210 1234788888754322211 1111
Q ss_pred CCCCCCceeEEE-cCe-EEEEeecCCCCeEEEEEEc-C-CcEEEEEE---EcCCCCcccceEEeeCCEEEEEee-CCeEE
Q 038747 254 IPYSSHESLGLF-NNS-VSLLHFDKSSHYIDIWLMS-D-MNWIQQFA---IGPFLGVMSPRGIWKNNAVLMESD-NGTLL 325 (401)
Q Consensus 254 ~~~~~~~~l~~~-~g~-L~~~~~~~~~~~l~IW~l~-~-~~W~~~~~---i~~~~~~~~p~~~~~~~~il~~~~-~~~l~ 325 (401)
.+... +|+ |.+.. .....+.+|-++ + +....... +........-+++..+|.|++... .+.+.
T Consensus 153 -------gi~~spdg~~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 153 -------GLDWSLDHKIFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVI 223 (297)
T ss_dssp -------EEEECTTSCEEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEE
T ss_pred -------ceEEcCCCCEEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEE
Confidence 12222 343 43433 344556666654 2 43332211 111111222356666888888754 56799
Q ss_pred EEECCCCcE-EEEeec
Q 038747 326 LYDLIVEEV-RDLGRF 340 (401)
Q Consensus 326 ~yd~~t~~~-~~v~~~ 340 (401)
.||++++++ ..+...
T Consensus 224 ~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EECTTTCCEEEEEECS
T ss_pred EEcCCCceEEEEEECC
Confidence 999997664 555443
No 49
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=71.86 E-value=67 Score=32.02 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=62.0
Q ss_pred CceeEECceEEEEEeecCCCCccEEEEEEcCCc--eEeEecCCCCCC--------CCCceeEEEcCeEEEEeecCCCCeE
Q 038747 212 FKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDE--EFREIERPRIPY--------SSHESLGLFNNSVSLLHFDKSSHYI 281 (401)
Q Consensus 212 ~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e--~~~~i~lP~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~l 281 (401)
..++..+|.+|.....+ .|.++|..++ .|+. +.+.... .....+.+.+|++.+.. ....
T Consensus 60 ~~P~v~~g~vyv~~~~~------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~- 128 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS------RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGT---LDGR- 128 (668)
T ss_dssp CCCEEETTEEEEEEGGG------EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC---TTSE-
T ss_pred cCCEEECCEEEEECCCC------eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEc---CCCE-
Confidence 36788999999887655 8999998655 4554 2222111 00112455667665432 2233
Q ss_pred EEEEEc--C--CcEEEEEEEcCCC---CcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEE
Q 038747 282 DIWLMS--D--MNWIQQFAIGPFL---GVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 282 ~IW~l~--~--~~W~~~~~i~~~~---~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
|..++ . ..|..... .+.. ....|+. .++.|++... .+.+++||.+|++..+-
T Consensus 129 -l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 129 -LIALDAKTGKAIWSQQTT-DPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp -EEEEETTTCCEEEEEECS-CTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred -EEEEECCCCCEeeeeccC-CCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 34444 2 46765431 1111 1123433 2567766543 36899999999987654
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=70.76 E-value=55 Score=28.78 Aligned_cols=73 Identities=10% Similarity=0.073 Sum_probs=46.3
Q ss_pred cCe-EEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEeeCCEEEE-Eee-CCeEEEE--ECCCCcEEEEee
Q 038747 266 NNS-VSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIWKNNAVLM-ESD-NGTLLLY--DLIVEEVRDLGR 339 (401)
Q Consensus 266 ~g~-L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~~~~~il~-~~~-~~~l~~y--d~~t~~~~~v~~ 339 (401)
+|+ |.+.. .....+.||-++. +.+..+..+.........+++.++|+.++ ... .+.+..| |.++++++.+..
T Consensus 250 dG~~l~v~~--~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 250 DGHFLYVSN--RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TSCEEEEEE--ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEEe--CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 455 43433 4567899999986 56666665543222234477778887544 443 3667777 888999988765
Q ss_pred c
Q 038747 340 F 340 (401)
Q Consensus 340 ~ 340 (401)
.
T Consensus 328 ~ 328 (347)
T 3hfq_A 328 D 328 (347)
T ss_dssp E
T ss_pred c
Confidence 4
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=70.62 E-value=42 Score=29.68 Aligned_cols=70 Identities=10% Similarity=0.182 Sum_probs=47.3
Q ss_pred cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEEE
Q 038747 266 NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 266 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v 337 (401)
+|.+.++. .....+.||-++...|.....+........-+++.+++..++. ..++.+..||+++++....
T Consensus 19 ~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAIC--PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEE--CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEE--eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 34443333 4567899999988778777777644333444667777766555 5567899999988875443
No 52
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=69.36 E-value=74 Score=31.00 Aligned_cols=112 Identities=11% Similarity=0.133 Sum_probs=62.0
Q ss_pred CceeEECceEEEEEe-ecCCCCccEEEEEEc-CCc--eEeEecCCCCCC--------CCCceeEEEcCeEEEEeecCCCC
Q 038747 212 FKSTNLNGVFYWLVS-RDDGDHSNIMLSFHI-SDE--EFREIERPRIPY--------SSHESLGLFNNSVSLLHFDKSSH 279 (401)
Q Consensus 212 ~~~v~~~G~lywl~~-~~~~~~~~~Il~fD~-~~e--~~~~i~lP~~~~--------~~~~~l~~~~g~L~~~~~~~~~~ 279 (401)
..++..+|.+|.... .+ .|.++|. .++ .|+. +++.... .....+.+.+|++.+.. ...
T Consensus 56 ~~P~v~~g~vyv~~~~~~------~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg 125 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN------NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ---ANG 125 (571)
T ss_dssp SCCEEETTEEEEECSTTT------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC---TTS
T ss_pred cccEEECCEEEEEeCCCC------EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEe---CCC
Confidence 367889999998765 33 7999998 554 4554 3332110 11112455677665432 222
Q ss_pred eEEEEEEcC----CcEEEEEEEcC--CCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEE
Q 038747 280 YIDIWLMSD----MNWIQQFAIGP--FLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 280 ~l~IW~l~~----~~W~~~~~i~~--~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
.+..++- ..|.....-.. ......|+. .++.|++... .+.+++||.+|++...-
T Consensus 126 --~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 126 --HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp --EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred --EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 2444443 45765321000 011123433 2577777654 57899999999987653
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=69.05 E-value=50 Score=27.66 Aligned_cols=184 Identities=10% Similarity=0.119 Sum_probs=90.6
Q ss_pred cccceEEEee-CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEE
Q 038747 107 PYDGIFCLCD-DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVA 185 (401)
Q Consensus 107 s~~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (401)
..+|-+.+.+ ...++++||.++....++.... ....++.+|+... +..... ....+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g~---l~v~~~----------~~~~i~ 132 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQGA---VYVADR----------GNNRVV 132 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC---------SSEEEEEECTTCC---EEEEEG----------GGTEEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---------CCCcceEECCCCC---EEEEEC----------CCCEEE
Confidence 3356555554 5688999998877665543221 1235677777432 332211 123566
Q ss_pred EEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeE
Q 038747 186 IYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLG 263 (401)
Q Consensus 186 vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~ 263 (401)
+|+.++......... .. ....++.+ +|.+|+..... ..|..||..+.......... . .....+.
T Consensus 133 ~~~~~~~~~~~~~~~--~~-----~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~-~-~~p~~i~ 198 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT--GL-----NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPFTD-I-TAPWGIA 198 (270)
T ss_dssp EECTTCCSCEECCCC--SC-----CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCCSS-C-CSEEEEE
T ss_pred EEECCCceeEeeccc--cC-----CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeecccC-C-CCceEEE
Confidence 666555433222111 10 01133433 58877655433 48999999877654432211 1 1111133
Q ss_pred EE-cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEeeCCEEEEEe-eCCeEEEEECCCCc
Q 038747 264 LF-NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIWKNNAVLMES-DNGTLLLYDLIVEE 333 (401)
Q Consensus 264 ~~-~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~~~~~il~~~-~~~~l~~yd~~t~~ 333 (401)
.. +|.|.+.. .....+.+|-.+. .... + +......| +++.++|.+++.. .++.+..|++..++
T Consensus 199 ~d~~g~l~v~~--~~~~~v~~~~~~~~~~~~----~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 199 VDEAGTVYVTE--HNTNQVVKLLAGSTTSTV----L-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCCEEEEE--TTTSCEEEECTTCSCCEE----C-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ECCCCCEEEEE--CCCCcEEEEcCCCCccee----e-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 32 34554443 3344555554433 1111 1 11222334 4555677777764 45678888876554
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=68.68 E-value=72 Score=29.32 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=32.1
Q ss_pred CCCeEEEEEEcCCcEEEEEEEc-CCC-CcccceEEeeCCEEEEEeeCCeEEEEECCCCcEE
Q 038747 277 SSHYIDIWLMSDMNWIQQFAIG-PFL-GVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 277 ~~~~l~IW~l~~~~W~~~~~i~-~~~-~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 335 (401)
....+.||-...+.-. ..+. +.. .+....++.++|.++....++.+..||+++++.+
T Consensus 376 ~~~~i~iwd~~~g~~~--~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 376 ELRTIDVFDGNSGKMM--CQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CCCCEEEECSSSCCEE--EEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred CCCEEEEEECCCCcEE--EEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 3456888876653322 2221 221 1222235677888888777888999999988765
No 55
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=68.65 E-value=57 Score=28.23 Aligned_cols=101 Identities=4% Similarity=-0.106 Sum_probs=55.4
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFA 296 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~ 296 (401)
+|.+||..... ..|..+|..+.....+..|.... .+.. -+|.|.+.. ...+.+|-.+.+.+.....
T Consensus 24 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~~~~~----~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 24 SNSLLFVDIPA-----KKVCRWDSFTKQVQRVTMDAPVS----SVALRQSGGYVATI----GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEECSSCEE----EEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEeCCCceE----EEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEe
Confidence 47999986543 48999999988877766654221 1222 245543322 2334444333355544443
Q ss_pred EcCCCCcc--cceEEeeCCEEEEEee------------CCeEEEEECCC
Q 038747 297 IGPFLGVM--SPRGIWKNNAVLMESD------------NGTLLLYDLIV 331 (401)
Q Consensus 297 i~~~~~~~--~p~~~~~~~~il~~~~------------~~~l~~yd~~t 331 (401)
........ .-+.+.++|.+++... .+.++.+|...
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 32211122 2255666888877642 23688888763
No 56
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=68.33 E-value=61 Score=28.33 Aligned_cols=60 Identities=8% Similarity=0.066 Sum_probs=34.2
Q ss_pred CCCCeEEEEEEcC-CcEEEEEEEcCCCC------------cccceEEeeCCEEEEE-eeCCeEEEEECCCCcEE
Q 038747 276 KSSHYIDIWLMSD-MNWIQQFAIGPFLG------------VMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 276 ~~~~~l~IW~l~~-~~W~~~~~i~~~~~------------~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~ 335 (401)
.....+.||-++. ..-.....+..... ...-+++.+++.+++. ..++.+..||+++++..
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 4667899999876 11011111111100 1223556667766555 56778999999987653
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=66.96 E-value=58 Score=27.59 Aligned_cols=194 Identities=9% Similarity=-0.029 Sum_probs=94.6
Q ss_pred eeccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCc
Q 038747 104 LLGPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEH 181 (401)
Q Consensus 104 ~~~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (401)
+.-..+|-+.+.. ...++++||. ++...+..+... ....++.+|+.. . +..... ..
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~--------~~~~~i~~~~~g-~--l~v~~~----------~~ 119 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPD--------SAPYGITEGPNG-D--IWFTEM----------NG 119 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--------CCEEEEEECTTS-C--EEEEET----------TT
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcC--------CCceeeEECCCC-C--EEEEec----------CC
Confidence 3333466665554 3578899986 444433321110 233456667632 2 222210 12
Q ss_pred ceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCC
Q 038747 182 SLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSH 259 (401)
Q Consensus 182 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~ 259 (401)
..+.+|+. ++......... ... ...++.+ +|.+|...... ..|..+|. ++++..+.+|......
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~-~~~-----~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~~~~~~~~~~- 185 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPN-KGS-----YPSFITLGSDNALWFTENQN-----NAIGRITE-SGDITEFKIPTPASGP- 185 (299)
T ss_dssp TEEEEECT-TCCEEEEECSS-TTC-----CEEEEEECTTSCEEEEETTT-----TEEEEECT-TCCEEEEECSSTTCCE-
T ss_pred ceEEEECC-CCCEEEecCCC-CCC-----CCceEEEcCCCCEEEEeCCC-----CEEEEEcC-CCcEEEeeCCCCCCcc-
Confidence 35566665 44433221110 000 0123333 57776654322 38999999 7777776665432111
Q ss_pred ceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccc--eEEeeCCEEEEEe-eCCeEEEEECCCCcEE
Q 038747 260 ESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSP--RGIWKNNAVLMES-DNGTLLLYDLIVEEVR 335 (401)
Q Consensus 260 ~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p--~~~~~~~~il~~~-~~~~l~~yd~~t~~~~ 335 (401)
..+... +|.|.+.. .....+.+|-. ++.... ..+ + .....| +++.++|.+++.. ..+.+..||+ +++++
T Consensus 186 ~~i~~~~~g~l~v~~--~~~~~i~~~~~-~g~~~~-~~~-~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 258 (299)
T 2z2n_A 186 VGITKGNDDALWFVE--IIGNKIGRITT-SGEITE-FKI-P-TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIE 258 (299)
T ss_dssp EEEEECTTSSEEEEE--TTTTEEEEECT-TCCEEE-EEC-S-STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEE
T ss_pred eeEEECCCCCEEEEc--cCCceEEEECC-CCcEEE-EEC-C-CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceE
Confidence 113332 45655443 33444554444 333322 222 1 112234 4555678887776 4578999999 56666
Q ss_pred EEeec
Q 038747 336 DLGRF 340 (401)
Q Consensus 336 ~v~~~ 340 (401)
.+...
T Consensus 259 ~~~~~ 263 (299)
T 2z2n_A 259 EYPIQ 263 (299)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 66543
No 58
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=66.36 E-value=80 Score=28.99 Aligned_cols=185 Identities=8% Similarity=0.034 Sum_probs=92.3
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcccc
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVS 197 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 197 (401)
..+++||..|++...+...+. ....+.+.|.. .+ ++.... . .....+.+++..++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----------~~~~~~~spdg-~~-la~~~~---~-----~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----------HNGAPAFSPDG-SK-LAFALS---K-----TGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----------CEEEEEECTTS-SE-EEEEEC---T-----TSSCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC----------cccCEEEcCCC-CE-EEEEEe---c-----CCCceEEEEECCCCCEEeC
Confidence 389999999988776543221 23345555542 22 332221 1 1245688889888766544
Q ss_pred CCCCcccceeeeCCCceeE--ECce-EEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeE-EEcCeEE-EE
Q 038747 198 KGNVEWIPYDFKSHFKSTN--LNGV-FYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLG-LFNNSVS-LL 272 (401)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~-~~ 272 (401)
.... ... ..+. -+|. ++...... ....|..+|+.+.+...+..... ....+. .-+|+.. +.
T Consensus 263 ~~~~--~~~------~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 263 TDGR--SNN------TEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMV 328 (415)
T ss_dssp CCCS--SCE------EEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEE
T ss_pred cCCC--Ccc------cceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEE
Confidence 3211 010 1111 1454 44444222 12378888998876544332211 000111 2245533 33
Q ss_pred eecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEE-EEeeCC---eEEEEECCCCcEEEEeec
Q 038747 273 HFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVL-MESDNG---TLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 273 ~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il-~~~~~~---~l~~yd~~t~~~~~v~~~ 340 (401)
..+.....+.+|-++.+.... +.... ....+++.++|..+ +....+ .+..+|+.++..+.+...
T Consensus 329 ~~~~g~~~i~~~d~~~~~~~~---l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 329 SSNGGQQHIAKQDLATGGVQV---LSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EECSSCEEEEEEETTTCCEEE---CCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCS
T ss_pred ECcCCceEEEEEECCCCCEEE---ecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCC
Confidence 322223455555555544322 22211 22335667777644 444333 799999998888777544
No 59
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=66.33 E-value=60 Score=27.52 Aligned_cols=192 Identities=9% Similarity=0.031 Sum_probs=94.9
Q ss_pred eeccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCc
Q 038747 104 LLGPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEH 181 (401)
Q Consensus 104 ~~~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (401)
+....+|-+.+.. ...+.++||. ++...++.+... ....++..|+... +.... . ..
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~--------~~~~~i~~~~~g~---l~v~~---~-------~~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPD--------AKVMCLIVSSLGD---IWFTE---N-------GA 82 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--------CCEEEEEECTTSC---EEEEE---T-------TT
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCC--------CcceeEEECCCCC---EEEEe---c-------CC
Confidence 4444456666554 3578999998 766654432110 2234566665432 22221 0 12
Q ss_pred ceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCC
Q 038747 182 SLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSH 259 (401)
Q Consensus 182 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~ 259 (401)
..+..|+.. +.++...... .. ....++.+ +|.+|...... ..|..+|.. ++...+.+|......
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~-~~-----~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~~~~~~~- 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ-PD-----SGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYDLPNKGSYP- 148 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS-TT-----CCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCE-
T ss_pred CeEEEECCC-CCeEEecCCC-CC-----CCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEccCCCCCCCc-
Confidence 356667766 5554332110 00 01123333 57776554322 389999998 666666665422111
Q ss_pred ceeEE-EcCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEeeCCEEEEEee-CCeEEEEECCCCcE
Q 038747 260 ESLGL-FNNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIWKNNAVLMESD-NGTLLLYDLIVEEV 334 (401)
Q Consensus 260 ~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~~~~~il~~~~-~~~l~~yd~~t~~~ 334 (401)
..+.. -+|.|.+.. ..... |++++. +.... ... +.. ...| +++.++|.+++... .+.+..||+ ++++
T Consensus 149 ~~i~~d~~g~l~v~~--~~~~~--i~~~~~~g~~~~-~~~-~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 149 AFITLGSDNALWFTE--NQNNS--IGRITNTGKLEE-YPL-PTN-AAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp EEEEECTTSSEEEEE--TTTTE--EEEECTTCCEEE-EEC-SST-TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred eeEEECCCCCEEEEe--cCCCe--EEEECCCCcEEE-eeC-CCC-CCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE
Confidence 11332 245655443 22333 344433 33332 222 111 2234 44555788887764 457999998 6666
Q ss_pred EEEee
Q 038747 335 RDLGR 339 (401)
Q Consensus 335 ~~v~~ 339 (401)
..+..
T Consensus 221 ~~~~~ 225 (300)
T 2qc5_A 221 SEYDI 225 (300)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66543
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=66.28 E-value=64 Score=27.80 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=37.4
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
.....+.+|-++.........+........-+++.+++..++. ..++.+..||+++++...
T Consensus 116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 3556899998887555444444432222334566666665554 567789999998876543
No 61
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=66.00 E-value=54 Score=32.80 Aligned_cols=114 Identities=13% Similarity=0.120 Sum_probs=62.3
Q ss_pred CceeEECceEEEEEeecCCCCccEEEEEEcCCce--EeEecCCCCCC--------CCCceeEEEcCeEEEEeecCCCCeE
Q 038747 212 FKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEE--FREIERPRIPY--------SSHESLGLFNNSVSLLHFDKSSHYI 281 (401)
Q Consensus 212 ~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~--~~~i~lP~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~l 281 (401)
..++..+|.+|.....+ .|.++|..+++ |+. +.+.... .....+...+|.+.+.. ....+
T Consensus 71 ~~P~v~~g~vyv~~~~~------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~---~dg~l 140 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS------VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA---WDGRL 140 (677)
T ss_dssp CCCEEETTEEEEECGGG------CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC---TTSEE
T ss_pred eCCEEECCEEEEECCCC------eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEc---CCCEE
Confidence 35788999999876554 89999987654 543 3322110 11112555666665432 23333
Q ss_pred EEEEEcC--CcEEEEEEEcC---CCCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEE
Q 038747 282 DIWLMSD--MNWIQQFAIGP---FLGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 282 ~IW~l~~--~~W~~~~~i~~---~~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
..+-.+. ..|......+. ......|+. .++.+++... ++.+.+||.+|++...-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 3333323 45765321011 011123433 2567766543 57899999999987653
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=65.92 E-value=34 Score=31.69 Aligned_cols=191 Identities=10% Similarity=0.038 Sum_probs=85.2
Q ss_pred eEEEe-eCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEc
Q 038747 111 IFCLC-DDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTS 189 (401)
Q Consensus 111 Ll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (401)
+|... .++.+.|||..+++...+-.... +. .....+.+.|..+.+- +... ..-.+.+++.
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H~--~~V~~l~f~p~~~~~l-~s~s-----------~D~~v~iwd~ 194 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----AG--GSITGLKFNPLNTNQF-YASS-----------MEGTTRLQDF 194 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCS-----SS--CCCCEEEECSSCTTEE-EEEC-----------SSSCEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccC-----CC--CCEEEEEEeCCCCCEE-EEEe-----------CCCEEEEeec
Confidence 44333 34689999998887543322111 11 2345566776554442 2221 1335778887
Q ss_pred CCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCce-eEEE-cC
Q 038747 190 TTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHES-LGLF-NN 267 (401)
Q Consensus 190 ~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~-l~~~-~g 267 (401)
+++.-+...... ..... ...-...-+|.+......+ ..|..+|+..+....+.... .... +... .+
T Consensus 195 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~~~~~~~h~----~~v~~v~~~p~~ 262 (435)
T 4e54_B 195 KGNILRVFASSD-TINIW--FCSLDVSASSRMVVTGDNV-----GNVILLNMDGKELWNLRMHK----KKVTHVALNPCC 262 (435)
T ss_dssp TSCEEEEEECCS-SCSCC--CCCEEEETTTTEEEEECSS-----SBEEEEESSSCBCCCSBCCS----SCEEEEEECTTC
T ss_pred cCCceeEEeccC-CCCcc--EEEEEECCCCCEEEEEeCC-----CcEeeeccCcceeEEEeccc----ceEEeeeecCCC
Confidence 765443322110 00000 0000111234333332222 36778888765433322111 0011 1111 23
Q ss_pred e-EEEEeecCCCCeEEEEEEcCCcEEEEEE-EcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcE
Q 038747 268 S-VSLLHFDKSSHYIDIWLMSDMNWIQQFA-IGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEV 334 (401)
Q Consensus 268 ~-L~~~~~~~~~~~l~IW~l~~~~W~~~~~-i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 334 (401)
. +.+.. .....+.||-+....-..... .........-+++.++|..++. ..++.+..||+++++.
T Consensus 263 ~~~~~s~--s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 263 DWFLATA--SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp SSEEEEE--ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred ceEEEEe--cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 2 33322 355678889776511000000 0000111122445567766665 5577899999987654
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=65.41 E-value=68 Score=27.82 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=52.1
Q ss_pred cEEEEEEcCC-ce--EeEecCCCCCCCCCceeEEE--cCeEEEEeecCCCCeEEEEEEcCC--c--EEEEEEEcCCCC--
Q 038747 234 NIMLSFHISD-EE--FREIERPRIPYSSHESLGLF--NNSVSLLHFDKSSHYIDIWLMSDM--N--WIQQFAIGPFLG-- 302 (401)
Q Consensus 234 ~~Il~fD~~~-e~--~~~i~lP~~~~~~~~~l~~~--~g~L~~~~~~~~~~~l~IW~l~~~--~--W~~~~~i~~~~~-- 302 (401)
..|..+|+.+ .. ......+.... -..+... +|.+.+.. .....+.||-++.. . ......+.....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~--i~~i~~~~~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQ--IRDVALLPKEQEGYACS--SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSC--EEEEEECSGGGCEEEEE--ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred CeEEEEECCccccccceeeecCCCCc--eeEEEECCCCCCEEEEE--ecCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 3888999987 32 33333222110 0112332 35544443 35678999988652 1 122222222111
Q ss_pred -------cccceEEeeCCEEEEE-eeCCeEEEEECCCCcEE
Q 038747 303 -------VMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 303 -------~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~ 335 (401)
...-+++.+++.+++. ..++.+..||+++++..
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 2223566667766555 55778999999988753
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=64.89 E-value=82 Score=28.57 Aligned_cols=192 Identities=10% Similarity=0.108 Sum_probs=95.3
Q ss_pred cccceEEEee--CCceEEEccccccccc-cCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 107 PYDGIFCLCD--DSLIFLWNPATKECRT-LPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 107 s~~GLl~~~~--~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
+.+|-+++.. +..+.+||+.+++... ++... ....++.+++..+ + ++.... ..-.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~-l~~~~~----------~~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKILLYDPIRD-L-VYCSNW----------ISED 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEEEEETTTT-E-EEEEET----------TTTE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEEEEcCCCC-E-EEEEec----------CCCc
Confidence 4456555553 4588999998866542 33211 1234556666433 2 222210 1346
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCC-C--CccEEEEEEcCCceEeEe-cCCCCCCC
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDG-D--HSNIMLSFHISDEEFREI-ERPRIPYS 257 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~-~--~~~~Il~fD~~~e~~~~i-~lP~~~~~ 257 (401)
+.+|+.+++.....-... ..+ ..+.+ +|...+.+....+ . ....|..+|+.+.+.... ..+...
T Consensus 236 i~~~d~~~~~~~~~~~~~-~~~-------~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-- 305 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKI-GLP-------RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK-- 305 (433)
T ss_dssp EEEEETTTTEEEEECCCC-SEE-------EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE--
T ss_pred EEEEECCCCcEEEEecCC-CCc-------eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc--
Confidence 888998876543221110 001 12222 4544444432100 0 124788999987754433 111110
Q ss_pred CCceeEE-EcC-eEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-ee--------------
Q 038747 258 SHESLGL-FNN-SVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SD-------------- 320 (401)
Q Consensus 258 ~~~~l~~-~~g-~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~-------------- 320 (401)
..+.. -+| .|.+.. .....+.+|-++... ....+.... ....+++.++|..++. ..
T Consensus 306 --~~~~~~~~g~~l~~~~--~~~~~v~v~d~~~~~--~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 306 --RHIVSGNTENKIYVSD--MCCSKIEVYDLKEKK--VQKSIPVFD-KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp --EEEEECSSTTEEEEEE--TTTTEEEEEETTTTE--EEEEEECSS-SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred --ceEEECCCCCEEEEEe--cCCCEEEEEECCCCc--EEEEecCCC-CCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 11222 234 344433 566788899887632 222333211 2234666777765444 33
Q ss_pred -CCeEEEEECCCCcEEEE
Q 038747 321 -NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 321 -~~~l~~yd~~t~~~~~v 337 (401)
++.+..||+++++....
T Consensus 379 ~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 379 VLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp SCCEEEEEETTTTEEEEE
T ss_pred cceEEEEEECCCCcEEEE
Confidence 24899999998876543
No 65
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=64.54 E-value=68 Score=27.47 Aligned_cols=112 Identities=8% Similarity=0.051 Sum_probs=69.6
Q ss_pred EECceEEEEEeecCCCCccEEEEEEcCCceE-eEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEE
Q 038747 216 NLNGVFYWLVSRDDGDHSNIMLSFHISDEEF-REIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQ 294 (401)
Q Consensus 216 ~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 294 (401)
+.+|.||--+... ....|..+|+.+++- ..+++|...- ...+...+++|.+.. .... .+|+.+-..-.++
T Consensus 28 ~~~~~LyestG~~---g~S~v~~vD~~tgkv~~~~~l~~~~f--geGi~~~~~~ly~lt--w~~~--~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 28 YLRGHLYESTGET---GRSSVRKVDLETGRILQRAEVPPPYF--GAGIVAWRDRLIQLT--WRNH--EGFVYDLATLTPR 98 (243)
T ss_dssp EETTEEEEEECCT---TSCEEEEEETTTCCEEEEEECCTTCC--EEEEEEETTEEEEEE--SSSS--EEEEEETTTTEEE
T ss_pred EECCEEEEECCCC---CCceEEEEECCCCCEEEEEeCCCCcc--eeEEEEeCCEEEEEE--eeCC--EEEEEECCcCcEE
Confidence 4456777655432 235899999987765 5567776431 122667788887665 3333 4556555444455
Q ss_pred EEEcCCCCcccceEEeeC-CEEEEEeeCCeEEEEECCCCcE-EEEee
Q 038747 295 FAIGPFLGVMSPRGIWKN-NAVLMESDNGTLLLYDLIVEEV-RDLGR 339 (401)
Q Consensus 295 ~~i~~~~~~~~p~~~~~~-~~il~~~~~~~l~~yd~~t~~~-~~v~~ 339 (401)
.+|.... .+.++..+ +.+++.....++..+|++|.+. +.|..
T Consensus 99 ~ti~~~~---~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 99 ARFRYPG---EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEECSS---CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEeCCC---CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 5554321 35666664 4677777788999999998664 44554
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=64.52 E-value=35 Score=29.92 Aligned_cols=112 Identities=7% Similarity=0.011 Sum_probs=57.5
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcC-CcEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSD-MNWIQQF 295 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~ 295 (401)
+|.+||..... ..|..+|..+.++..+..+.. ..-..+.. -+|+|.+.........-.|++++. ..... .
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~ 126 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-D 126 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-E
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-E
Confidence 67887765433 379999998888776532211 00011332 256665544211011123444443 21111 1
Q ss_pred EEc-CCC-CcccceEEeeCCEEEEEee-------CCeEEEEECCCCcEEEE
Q 038747 296 AIG-PFL-GVMSPRGIWKNNAVLMESD-------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 296 ~i~-~~~-~~~~p~~~~~~~~il~~~~-------~~~l~~yd~~t~~~~~v 337 (401)
.+. ... .....+.+.++|.+++... .+.++.+|+++++++.+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111 111 1122356666888888754 35799999988777655
No 67
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=63.34 E-value=69 Score=27.44 Aligned_cols=108 Identities=5% Similarity=-0.092 Sum_probs=60.7
Q ss_pred Cce-EEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEE
Q 038747 218 NGV-FYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQF 295 (401)
Q Consensus 218 ~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 295 (401)
+|. +||..... ..|..+|..++ +..+..|.... ..+.. -+|.|.+.. .....+.+|-.+++......
T Consensus 38 ~g~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~~~~~~---~~l~~~~dg~l~v~~--~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 38 ARSAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMHPSHHQ---NGHCLNKQGHLIACS--HGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp GGTEEEEEEGGG-----TEEEEEETTSC-EEEEESSCSSE---EEEEECTTCCEEEEE--TTTTEEEEECSTTCCEEEEE
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCC-eEEEECCCCCc---ceeeECCCCcEEEEe--cCCCeEEEEcCCCCcEEEEe
Confidence 464 89987654 48999999988 76665543210 11332 356665443 34455666655444433322
Q ss_pred EEcCCCC--cccceEEeeCCEEEEEee------------------CCeEEEEECCCCcEEEE
Q 038747 296 AIGPFLG--VMSPRGIWKNNAVLMESD------------------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 296 ~i~~~~~--~~~p~~~~~~~~il~~~~------------------~~~l~~yd~~t~~~~~v 337 (401)
....... ...-+++.++|.+++... .+.++.||.+ ++++.+
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 1111110 122367777888888521 3479999987 666554
No 68
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=62.86 E-value=97 Score=30.96 Aligned_cols=114 Identities=11% Similarity=0.095 Sum_probs=62.6
Q ss_pred CceeEECceEEEEEeecCCCCccEEEEEEcCCc--eEeEecCCCCCC--------CCCceeEEEcCeEEEEeecCCCCeE
Q 038747 212 FKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDE--EFREIERPRIPY--------SSHESLGLFNNSVSLLHFDKSSHYI 281 (401)
Q Consensus 212 ~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e--~~~~i~lP~~~~--------~~~~~l~~~~g~L~~~~~~~~~~~l 281 (401)
..++..+|.+|...... .|.++|..++ .|+. +.+.... .....+.+.+|.+.+.. ....+
T Consensus 64 ~~P~v~~g~vyv~~~~~------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~---~dg~l 133 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS------VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV---LDGRL 133 (689)
T ss_dssp CCCEEETTEEEEECGGG------CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC---TTSEE
T ss_pred ecCEEECCEEEEEcCCC------eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEc---cCCEE
Confidence 35688999999876554 8999998654 4654 2222110 01112455667665432 23333
Q ss_pred EEEEEcC--CcEEEEEEEcCCC---CcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEE
Q 038747 282 DIWLMSD--MNWIQQFAIGPFL---GVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 282 ~IW~l~~--~~W~~~~~i~~~~---~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
..+-.+. ..|......++.. ....|+. .++.+++... ++.+++||.+|++...-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 3333333 4577643212111 1123443 2567766542 46899999999987553
No 69
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=61.76 E-value=81 Score=27.46 Aligned_cols=202 Identities=8% Similarity=-0.020 Sum_probs=98.1
Q ss_pred cccceEEEee--CCceEEEcccccccc-ccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 107 PYDGIFCLCD--DSLIFLWNPATKECR-TLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 107 s~~GLl~~~~--~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
..++.+.+.. ...+.++|+.|++.. .++......+.. .......++.+++..+ + ++.... . ....
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-~-l~~~~~---~------~~~~ 165 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEE-VRPLQPRELVADDATN-T-VYISGI---G------KESV 165 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSS-CCCCEEEEEEEETTTT-E-EEEEEE---S------SSCE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccc-cCCCCCceEEECCCCC-E-EEEEec---C------CCce
Confidence 3344454443 358999999998864 344322111100 0112245677777544 2 222210 1 1346
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEe-EecCCCCCCCCCc-e
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFR-EIERPRIPYSSHE-S 261 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~-~i~lP~~~~~~~~-~ 261 (401)
+.+|+..++.=...-......+. .-.+.-+|...+..... ..|..+|+.+.+.. .+..+........ .
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~-----~~~~s~dg~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMST-----GLALDSEGKRLYTTNAD-----GELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCC-----CCEEETTTTEEEEECTT-----SEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred EEEEcCCCCceEEEecCCCCccc-----eEEECCCCCEEEEEcCC-----CeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 78888876532111000000011 11222255433333322 38889999887654 3454332111111 1
Q ss_pred eEEE-cCe-EEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCE-EEEEe-eCCeEEEEECCCCcEEE
Q 038747 262 LGLF-NNS-VSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNA-VLMES-DNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 262 l~~~-~g~-L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~-il~~~-~~~~l~~yd~~t~~~~~ 336 (401)
+... +|+ |.+.. .....+.+|-++...-.....+. . ..-+++.++|+ +++.. .++.+..||.++++...
T Consensus 236 ~~~s~dg~~l~~~~--~~~~~v~~~d~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 236 ISLDTARQRAFITD--SKAAEVLVVDTRNGNILAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEEETTTTEEEEEE--SSSSEEEEEETTTCCEEEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEe--CCCCEEEEEECCCCcEEEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 2322 344 43333 45567777766554333333322 1 12367777776 55554 46789999999887644
No 70
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=61.53 E-value=85 Score=27.63 Aligned_cols=114 Identities=7% Similarity=-0.075 Sum_probs=64.3
Q ss_pred EEEEeecCCCCccEEEEEEcCCceEeEec-C---CCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEE
Q 038747 222 YWLVSRDDGDHSNIMLSFHISDEEFREIE-R---PRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAI 297 (401)
Q Consensus 222 ywl~~~~~~~~~~~Il~fD~~~e~~~~i~-l---P~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i 297 (401)
|-+.....+.....|-.+|.++.++...- . +.........+...+++|.+.. .....+.+|=.+. ...+.+|
T Consensus 5 ~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~--~~~~~v~viD~~t--~~~~~~i 80 (328)
T 3dsm_A 5 FITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVV--NNSHVIFAIDINT--FKEVGRI 80 (328)
T ss_dssp EEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEE--GGGTEEEEEETTT--CCEEEEE
T ss_pred EEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEE--cCCCEEEEEECcc--cEEEEEc
Confidence 44443322223468999999988875421 0 1111111122666788887665 3445555554433 3344444
Q ss_pred cCCCCcccceEEeeCCEEEEEe-eCCeEEEEECCCCcEE-EEeec
Q 038747 298 GPFLGVMSPRGIWKNNAVLMES-DNGTLLLYDLIVEEVR-DLGRF 340 (401)
Q Consensus 298 ~~~~~~~~p~~~~~~~~il~~~-~~~~l~~yd~~t~~~~-~v~~~ 340 (401)
... ....-+++..++.+++.. ..+.+..+|++++++. .+...
T Consensus 81 ~~~-~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 81 TGF-TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp ECC-SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred CCC-CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 321 122335665678888876 6778999999999875 44443
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=59.84 E-value=88 Score=27.25 Aligned_cols=63 Identities=8% Similarity=0.174 Sum_probs=36.8
Q ss_pred CeEEEEeecCCCCeEEEEEEcC-C-cEEEEEEEcCC--CCcccceEEeeCCEEEEE-eeCCeEEEEECCC
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSD-M-NWIQQFAIGPF--LGVMSPRGIWKNNAVLME-SDNGTLLLYDLIV 331 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~-~-~W~~~~~i~~~--~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t 331 (401)
|.+.+.. .....+.||-++. . .......+... .....-+++.+++.+++. ..++.+..||+.+
T Consensus 299 ~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALG--NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEE--CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEE--ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 5544443 4667899999987 2 22233344332 122334666677776665 5677899999864
No 72
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=59.63 E-value=86 Score=27.05 Aligned_cols=102 Identities=11% Similarity=0.083 Sum_probs=56.2
Q ss_pred cEEEEEEcCC-ceEeE-----ecCCCCCCCCCceeEE-EcCe-EEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCC-C
Q 038747 234 NIMLSFHISD-EEFRE-----IERPRIPYSSHESLGL-FNNS-VSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFL-G 302 (401)
Q Consensus 234 ~~Il~fD~~~-e~~~~-----i~lP~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~-~ 302 (401)
..|..+|+.+ .+... +..+.... ...+.. -+|+ |.+.. .....+.+|-++. +.+.....+...+ .
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pdg~~l~~~~--~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAG--PRHMVFHPNEQYAYCVN--ELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCC--EEEEEECTTSSEEEEEE--TTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred CEEEEEEecCCCceeeecccccccCCCCC--cceEEECCCCCEEEEEe--CCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 3799999987 65542 23332111 011222 2444 43333 4667899999965 5555444443221 1
Q ss_pred ---ccc--ceEEeeCCEEEE-Ee-eCCeEEEEECC--CCcEEEEee
Q 038747 303 ---VMS--PRGIWKNNAVLM-ES-DNGTLLLYDLI--VEEVRDLGR 339 (401)
Q Consensus 303 ---~~~--p~~~~~~~~il~-~~-~~~~l~~yd~~--t~~~~~v~~ 339 (401)
... -+++.++|+.++ .. .++.+..||++ +++.+.+..
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 112 266777775544 44 46789999988 566666543
No 73
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=58.94 E-value=79 Score=26.38 Aligned_cols=191 Identities=10% Similarity=0.065 Sum_probs=88.5
Q ss_pred eeccccceEEE-e--eCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCC
Q 038747 104 LLGPYDGIFCL-C--DDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYE 180 (401)
Q Consensus 104 ~~~s~~GLl~~-~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 180 (401)
+.-+.+|-+.+ . ....++++|+.++....++.... ....++.+|+... +.....
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~p~~i~~~~~g~---l~v~~~----------- 85 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---------YQPQGLAVDGAGT---VYVTDF----------- 85 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC---------CSCCCEEECTTCC---EEEEET-----------
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc---------CCcceeEECCCCC---EEEEcC-----------
Confidence 33344566665 4 34588899998877665543322 1223456666432 222210
Q ss_pred cceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCC
Q 038747 181 HSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSS 258 (401)
Q Consensus 181 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~ 258 (401)
...+.+|+..++.-+.........| .++.+ +|.+|+..... ..|..+|..+......... ... .
T Consensus 86 ~~~i~~~d~~~~~~~~~~~~~~~~p-------~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~-~~~-~ 151 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQTVLPFDGLNYP-------EGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFT-GLN-D 151 (270)
T ss_dssp TTEEEEECTTCSCCEECCCCSCSSE-------EEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCC-SCC-S
T ss_pred CCEEEEEeCCCceEeeeecCCcCCC-------cceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccc-cCC-C
Confidence 2256777776654332221100111 23333 57777654332 3788888766544332111 111 1
Q ss_pred CceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccc--eEEeeCCEEEEEee-CCeEEEEECCCCcE
Q 038747 259 HESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSP--RGIWKNNAVLMESD-NGTLLLYDLIVEEV 334 (401)
Q Consensus 259 ~~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p--~~~~~~~~il~~~~-~~~l~~yd~~t~~~ 334 (401)
...+... +|.|.+.. .....+.+|-.+... ... . .......| +++.++|.+++... .+.+..||++++..
T Consensus 152 p~~i~~~~~g~l~v~~--~~~~~i~~~~~~~~~--~~~-~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTD--TDNNRVVKLEAESNN--QVV-L-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCCEEECTTCCEEEEE--GGGTEEEEECTTTCC--EEE-C-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred ceeEEEeCCCCEEEEE--CCCCEEEEEecCCCc--eEe-e-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 1113332 46655443 233445444433311 111 1 11112333 55556778877754 55799999987765
Q ss_pred EEE
Q 038747 335 RDL 337 (401)
Q Consensus 335 ~~v 337 (401)
..+
T Consensus 226 ~~~ 228 (270)
T 1rwi_B 226 TVL 228 (270)
T ss_dssp EEC
T ss_pred eee
Confidence 443
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=58.41 E-value=84 Score=27.83 Aligned_cols=61 Identities=8% Similarity=-0.152 Sum_probs=36.1
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEE
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~ 336 (401)
.....+.||-++. ........+........-+.+.+++.++....++.++.|+...+.++.
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAH 286 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CC
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEE
Confidence 3566899999887 222223333322222334677789998888777788899887655443
No 75
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=58.21 E-value=99 Score=27.29 Aligned_cols=54 Identities=9% Similarity=0.152 Sum_probs=37.8
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEEC
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDL 329 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~ 329 (401)
.....+.||-++...|.....+........-+++.++|..++. ..++.+..||.
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 3566899999988888877776644333344677777776665 45677888885
No 76
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=58.08 E-value=85 Score=26.48 Aligned_cols=194 Identities=11% Similarity=0.085 Sum_probs=94.3
Q ss_pred ccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 106 GPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 106 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
+..+|.|.+.+ ...++++++.++....+-.... ....++.+|+..+. +.... . ....
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---------~~p~~ia~d~~~~~--lyv~d---~-------~~~~ 102 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---------GSPEGIALDHLGRT--IFWTD---S-------QLDR 102 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC---------CCEEEEEEETTTTE--EEEEE---T-------TTTE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC---------CCccEEEEEecCCe--EEEEE---C-------CCCE
Confidence 44566666665 3478888887665433221111 23356777775442 22221 0 1346
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCc
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHE 260 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~ 260 (401)
+.+++..+..-+.+... .. ....++.+ +|.+||..... ....|..+++.......+.. .... ...
T Consensus 103 I~~~~~~g~~~~~~~~~--~~-----~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~-~~~~-~P~ 170 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDT--GL-----VNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQ-DNLG-LPN 170 (267)
T ss_dssp EEEEETTSCSCEEEECS--SC-----SSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEEC-TTCS-CEE
T ss_pred EEEEEcCCCCEEEEEEC--CC-----CCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEE-CCCC-CCc
Confidence 77777754322211110 00 11134444 68999986431 12488899987655443321 1111 111
Q ss_pred eeEEE--cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee-CCEEEEEe-eCCeEEEEECCCCcE-E
Q 038747 261 SLGLF--NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK-NNAVLMES-DNGTLLLYDLIVEEV-R 335 (401)
Q Consensus 261 ~l~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~~-~~~~l~~yd~~t~~~-~ 335 (401)
.+..- ++.|.+.. ..... |++.+-..-.....+. ....|.++.. ++.+++.. ..+.+..+|+++++. +
T Consensus 171 gia~d~~~~~lyv~d--~~~~~--I~~~~~~g~~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 171 GLTFDAFSSQLCWVD--AGTHR--AECLNPAQPGRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEEEETTTTEEEEEE--TTTTE--EEEEETTEEEEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEE--CCCCE--EEEEecCCCceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 14443 35665554 34444 4444431111111122 1234555543 56677765 456899999988764 4
Q ss_pred EEee
Q 038747 336 DLGR 339 (401)
Q Consensus 336 ~v~~ 339 (401)
.+..
T Consensus 244 ~i~~ 247 (267)
T 1npe_A 244 TFHP 247 (267)
T ss_dssp EECC
T ss_pred EEcc
Confidence 5543
No 77
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=57.88 E-value=79 Score=27.66 Aligned_cols=110 Identities=11% Similarity=0.105 Sum_probs=59.3
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCC----------------CCc-eeEEE--cCeEEEEeecCCC
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYS----------------SHE-SLGLF--NNSVSLLHFDKSS 278 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~----------------~~~-~l~~~--~g~L~~~~~~~~~ 278 (401)
+|.++|..... ..|..||..+..+..+..+..... ... .+... +|.|.+.. ..
T Consensus 29 ~g~~l~v~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d--~~- 100 (322)
T 2fp8_A 29 TNKGFYTSVQD-----GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD--CY- 100 (322)
T ss_dssp TCSSEEEECTT-----SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE--TT-
T ss_pred CCCEEEEEcCC-----CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE--CC-
Confidence 57777775433 489999998877776644322100 011 14444 46676554 22
Q ss_pred CeEEEEEEcC--CcEEEEEEEcCCCCc--ccceEEee-CCEEEEEeeC------------------CeEEEEECCCCcEE
Q 038747 279 HYIDIWLMSD--MNWIQQFAIGPFLGV--MSPRGIWK-NNAVLMESDN------------------GTLLLYDLIVEEVR 335 (401)
Q Consensus 279 ~~l~IW~l~~--~~W~~~~~i~~~~~~--~~p~~~~~-~~~il~~~~~------------------~~l~~yd~~t~~~~ 335 (401)
.. |++++. +.............. ..-+++.+ +|.|++.... +.++.||+++++++
T Consensus 101 ~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 101 YH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 22 444443 222221111110111 22366777 8888887532 57999999988876
Q ss_pred EE
Q 038747 336 DL 337 (401)
Q Consensus 336 ~v 337 (401)
.+
T Consensus 179 ~~ 180 (322)
T 2fp8_A 179 LL 180 (322)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 78
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=56.58 E-value=1e+02 Score=27.00 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=55.5
Q ss_pred ceeEE--C-ceEEEEEeecCCCCccEEEEEEcCCceE-eEecCCCCCCCCC------ceeEEEcCeEEEEeecCCCCeEE
Q 038747 213 KSTNL--N-GVFYWLVSRDDGDHSNIMLSFHISDEEF-REIERPRIPYSSH------ESLGLFNNSVSLLHFDKSSHYID 282 (401)
Q Consensus 213 ~~v~~--~-G~lywl~~~~~~~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~------~~l~~~~g~L~~~~~~~~~~~l~ 282 (401)
.++.+ + |.+|...... ..|..||..+.++ ..+..+....... ..+...+|.+.+. +.....+.
T Consensus 199 ~gia~d~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~--~~~~~~v~ 271 (329)
T 3fvz_A 199 HSLALVPHLDQLCVADREN-----GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFG--DQEPVQGF 271 (329)
T ss_dssp EEEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTT--CSCCCCEE
T ss_pred cEEEEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEec--cCCCcEEE
Confidence 45555 3 7888765443 5899999985554 4454443221110 1122333332221 23445677
Q ss_pred EEEEcCCcEEEEEEEcCC-CCcccc--eEEeeCCEEEEEe-eCCeEEEEECC
Q 038747 283 IWLMSDMNWIQQFAIGPF-LGVMSP--RGIWKNNAVLMES-DNGTLLLYDLI 330 (401)
Q Consensus 283 IW~l~~~~W~~~~~i~~~-~~~~~p--~~~~~~~~il~~~-~~~~l~~yd~~ 330 (401)
+|-++.+.... .+.+. .....| +++.++|.+++.. .++.+..|+++
T Consensus 272 ~~~~~~g~~~~--~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 272 VMNFSSGEIID--VFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEETTTCCEEE--EECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEcCCCeEEE--EEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 77666644333 33321 122334 5666677776654 34567777654
No 79
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=55.32 E-value=1.1e+02 Score=26.83 Aligned_cols=65 Identities=11% Similarity=0.145 Sum_probs=43.7
Q ss_pred CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeC--CEEEE-EeeCCeEEEEECCCCc
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKN--NAVLM-ESDNGTLLLYDLIVEE 333 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~--~~il~-~~~~~~l~~yd~~t~~ 333 (401)
|.+.+.. .....+.||-++...|.....+........-+.+.++ +.+++ ...++.+..||++++.
T Consensus 69 ~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASC--SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEE--ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCEEEEe--ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 4544433 3557899999999888887776543333344566665 55544 4667889999998873
No 80
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=54.67 E-value=1.1e+02 Score=26.82 Aligned_cols=104 Identities=10% Similarity=0.112 Sum_probs=57.8
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC--CcEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD--MNWIQQF 295 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~ 295 (401)
+|.+||..... ..|..+|..+++...+..|.... .....-+|++.+.. . .. |+.++. +......
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~~~v~---~i~~~~dg~l~v~~--~--~g--l~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVHALPFMGS---ALAKISDSKQLIAS--D--DG--LFLRDTATGVLTLHA 125 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEEECSSCEE---EEEEEETTEEEEEE--T--TE--EEEEETTTCCEEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEECCCcce---EEEEeCCCeEEEEE--C--CC--EEEEECCCCcEEEEe
Confidence 37899986544 48999999988887776653211 11223466665443 1 22 455443 5444332
Q ss_pred EEcCCCC--cccceEEeeCCEEEEEee-------CCeEEEEECCCCcEEEE
Q 038747 296 AIGPFLG--VMSPRGIWKNNAVLMESD-------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 296 ~i~~~~~--~~~p~~~~~~~~il~~~~-------~~~l~~yd~~t~~~~~v 337 (401)
....... ...-+.+.++|.+++... .+.++.|| +++++.+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 2111111 122355666888877653 25788888 5666654
No 81
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=54.27 E-value=1.1e+02 Score=26.61 Aligned_cols=109 Identities=10% Similarity=-0.038 Sum_probs=64.2
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCceE-eEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEE
Q 038747 217 LNGVFYWLVSRDDGDHSNIMLSFHISDEEF-REIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQF 295 (401)
Q Consensus 217 ~~G~lywl~~~~~~~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 295 (401)
.+|.||--+... ..|..+|+.+++- ..+ +|... ....+...+++|.+.. .... .+|+.+-..-.++.
T Consensus 63 ~~~~Ly~stG~~-----g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~lt--w~~~--~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 63 HQGHFFESTGHQ-----GTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLT--WTEG--LLFTWSGMPPQRER 130 (268)
T ss_dssp ETTEEEEEETTT-----TEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEE--SSSC--EEEEEETTTTEEEE
T ss_pred ECCEEEEEcCCC-----CEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEE--ccCC--EEEEEECCcCcEEE
Confidence 456777655443 2599999987765 334 65422 1122666677776654 3333 45666654444555
Q ss_pred EEcCCCCcccceEEee-CCEEEEEeeCCeEEEEECCCCcE-EEEeec
Q 038747 296 AIGPFLGVMSPRGIWK-NNAVLMESDNGTLLLYDLIVEEV-RDLGRF 340 (401)
Q Consensus 296 ~i~~~~~~~~p~~~~~-~~~il~~~~~~~l~~yd~~t~~~-~~v~~~ 340 (401)
+|.... .+.++.. ++.+++......+..+|++|.+. +.|...
T Consensus 131 ti~~~~---eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 131 TTRYSG---EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp EEECSS---CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEeCCC---ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeC
Confidence 554321 2355555 45666777678899999998664 445543
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=53.97 E-value=1.8e+02 Score=29.11 Aligned_cols=95 Identities=11% Similarity=0.096 Sum_probs=56.1
Q ss_pred EEEEEEcCCceEeEec-CCCCCCCCCce-eEEE-c--CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEE
Q 038747 235 IMLSFHISDEEFREIE-RPRIPYSSHES-LGLF-N--NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGI 309 (401)
Q Consensus 235 ~Il~fD~~~e~~~~i~-lP~~~~~~~~~-l~~~-~--g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~ 309 (401)
.|..+|+.+++...+. +..... ... +... . |.+.+.. .....+.||-++.+.|.....+........-+.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~--~V~~l~~s~~~~~~~l~s~--s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG--PVWRVDWAHPKFGTILASC--SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS--CEEEEEECCTTSCSEEEEE--ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred cEEEEecCCCCCccceeccCCcC--ceEEEEecCCCCCCEEEEE--eCCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 6777777755554442 221111 111 2221 2 4443333 4567899999998888777776543333344566
Q ss_pred eeC--CEEEEE-eeCCeEEEEECCCCc
Q 038747 310 WKN--NAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 310 ~~~--~~il~~-~~~~~l~~yd~~t~~ 333 (401)
.++ +.+++. ..++.+..||++++.
T Consensus 108 sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 108 APHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 665 655554 667889999998873
No 83
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=53.96 E-value=1.1e+02 Score=26.74 Aligned_cols=185 Identities=8% Similarity=-0.040 Sum_probs=90.5
Q ss_pred eEEEeeCCceEEEcccccccccc-CCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEc
Q 038747 111 IFCLCDDSLIFLWNPATKECRTL-PNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTS 189 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (401)
.|++.....+.+.++.+++...+ |.. ....++.+|+..+. |..... ....+..++.
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~-----------~~p~g~~~d~~~~~--ly~~D~----------~~~~I~~~~~ 59 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNL-----------RNVVALDTEVASNR--IYWSDL----------SQRMICSTQL 59 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSC-----------SSEEEEEEETTTTE--EEEEET----------TTTEEEEEEC
T ss_pred EEEEECCCeEEEEECCCcceEehhcCC-----------CceEEEEEEeCCCE--EEEEEC----------CCCcEEEEEC
Confidence 35566666777788877765543 221 23467778876542 222211 1335666666
Q ss_pred CCC---Cc-cccCCCCcccceeeeCCCceeE---ECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCcee
Q 038747 190 TTD---SW-RVSKGNVEWIPYDFKSHFKSTN---LNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESL 262 (401)
Q Consensus 190 ~t~---~W-~~~~~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l 262 (401)
.+. +- +.+... .+ ....++. .+|.+||..... ..|..+|+....-..+- ..... ....+
T Consensus 60 ~g~~~~~~~~~~~~~--~~-----~~p~glavd~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~-~~~~~-~P~~i 125 (316)
T 1ijq_A 60 DRAHGVSSYDTVISR--DI-----QAPDGLAVDWIHSNIYWTDSVL-----GTVSVADTKGVKRKTLF-RENGS-KPRAI 125 (316)
T ss_dssp --------CEEEECS--SC-----SCCCEEEEETTTTEEEEEETTT-----TEEEEEETTSSSEEEEE-ECTTC-CEEEE
T ss_pred CCCCCCcccEEEEeC--CC-----CCcCEEEEeecCCeEEEEECCC-----CEEEEEeCCCCceEEEE-ECCCC-CcceE
Confidence 541 11 111000 00 1113444 368999986443 48999999865443331 11111 11114
Q ss_pred EEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEee-CCEEEEEe-eCCeEEEEECCCCcEE
Q 038747 263 GLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIWK-NNAVLMES-DNGTLLLYDLIVEEVR 335 (401)
Q Consensus 263 ~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~ 335 (401)
.+- +|.|.+.. ... .-.|++.+- ++-.+.. +. ..+..| +++.. ++.|++.. ..+.+..+|+..+..+
T Consensus 126 avdp~~g~ly~~d--~~~-~~~I~~~~~dG~~~~~~-~~--~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 126 VVDPVHGFMYWTD--WGT-PAKIKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199 (316)
T ss_dssp EEETTTTEEEEEE--CSS-SCEEEEEETTSCCEEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred EeCCCCCEEEEEc--cCC-CCeEEEEcCCCCCeEEE-EE--CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence 443 56665443 221 124555543 3222221 11 123344 55553 56777765 3557999999876665
Q ss_pred EEe
Q 038747 336 DLG 338 (401)
Q Consensus 336 ~v~ 338 (401)
.+.
T Consensus 200 ~~~ 202 (316)
T 1ijq_A 200 TIL 202 (316)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 84
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=53.77 E-value=1.4e+02 Score=27.69 Aligned_cols=115 Identities=9% Similarity=0.078 Sum_probs=63.9
Q ss_pred ceeEEC----ceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCe-EEEEeecC-CCCeEEEEE
Q 038747 213 KSTNLN----GVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNS-VSLLHFDK-SSHYIDIWL 285 (401)
Q Consensus 213 ~~v~~~----G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~-L~~~~~~~-~~~~l~IW~ 285 (401)
..+.++ |.||+.... ..|..||+.+.....+.-+. . ....+.. .+|. |.+..... ......+|.
T Consensus 140 ~~lavdp~~~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~~--~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQ------HPTRLIDFEKEYVSTVYSGL--S-KVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CEEEEETTEEEEEEEEEBT------EEEEEEETTTTEEEEEECCC--S-CEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CEEEECCCCCCeEEEEeCC------CcEEEEECCCCEEEEEecCC--C-CcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 445544 888887643 48999999998876653211 1 1111333 2455 55544211 223345566
Q ss_pred EcCCcEEEEEEEcCCCCcccceEEee-CCEEEEEe-eCCeEEEEECCCCcEEEE
Q 038747 286 MSDMNWIQQFAIGPFLGVMSPRGIWK-NNAVLMES-DNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 286 l~~~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~v 337 (401)
..++.|.....+.... ...-+++.+ +|.|++.. ..+++..||+.+++...+
T Consensus 211 ~~~g~~~~~~~l~~~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 211 TRESGFKVITELTKGQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp EGGGTSCSEEEEEECS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eCCCceeeeeeeccCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 6555554222222111 122366777 78888764 467899999998877443
No 85
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=53.18 E-value=1.1e+02 Score=26.46 Aligned_cols=99 Identities=5% Similarity=-0.063 Sum_probs=48.9
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCC--CCcccceEEe
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPF--LGVMSPRGIW 310 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~--~~~~~p~~~~ 310 (401)
..|..+|+.+.+... ++.+.. . .......-+|+..++. .....+.+|-++...=.....+... .....-+++.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~-~-~~~~~~s~dg~~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGK-M-STGLALDSEGKRLYTT--NADGELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCT-T-CCCCEEETTTTEEEEE--CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred ceEEEEcCCCCceEEEecCCCC-c-cceEEECCCCCEEEEE--cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 379999998776543 332211 0 1111122244433333 2345666665554222222222111 1112236677
Q ss_pred eCCE-EEEEee-CCeEEEEECCCCcEEE
Q 038747 311 KNNA-VLMESD-NGTLLLYDLIVEEVRD 336 (401)
Q Consensus 311 ~~~~-il~~~~-~~~l~~yd~~t~~~~~ 336 (401)
++|. +++... .+.+..||+++++...
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 7665 544443 4789999998887643
No 86
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=52.68 E-value=18 Score=26.90 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=29.4
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEE
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFIC 168 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (401)
.+++.+|.|++|. |.... .....+.+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~~-------~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGS-------TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE--EGGGC-------CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCC-------CCceEEEEEEECCCCEEEEEEEE
Confidence 5788999999774 43321 01345778899988999999874
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=52.05 E-value=1.2e+02 Score=26.36 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=36.1
Q ss_pred CCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEEE
Q 038747 276 KSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 276 ~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v 337 (401)
.....+.+|-+.. ..-. ..+........-+.+.+++..++. ..++.+..||+++++....
T Consensus 194 ~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 194 HKDGKISKYDVSNNYEYV--DSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ETTSEEEEEETTTTTEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cCCCEEEEEECCCCcEeE--EEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 3556788888766 3322 233322222333566667766554 5677899999998775443
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=51.98 E-value=1.2e+02 Score=26.19 Aligned_cols=27 Identities=4% Similarity=0.126 Sum_probs=19.5
Q ss_pred eEEeeCCEEEEE-eeCCeEEEEECCCCc
Q 038747 307 RGIWKNNAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 307 ~~~~~~~~il~~-~~~~~l~~yd~~t~~ 333 (401)
+++.++|..++. ..++.+..||++|++
T Consensus 312 l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 566778877776 456789999998875
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=51.44 E-value=70 Score=27.92 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=39.6
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEEEee
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v~~ 339 (401)
.....+.||-++.........+........-+++.+++..++. ..++.+..||+++++...+..
T Consensus 61 ~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 61 SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 3556799999987333332333322222334566667766554 567789999999988766543
No 90
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=51.33 E-value=94 Score=26.71 Aligned_cols=112 Identities=7% Similarity=-0.030 Sum_probs=53.4
Q ss_pred eeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCC--Cce-e-EEEcCeEEEEeecCCCCeEEEEEEcC-
Q 038747 214 STNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSS--HES-L-GLFNNSVSLLHFDKSSHYIDIWLMSD- 288 (401)
Q Consensus 214 ~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~--~~~-l-~~~~g~L~~~~~~~~~~~l~IW~l~~- 288 (401)
.+.-||.++...... ...|++||...+....+.+....... ... + ...+|.+.+.. .....+..|-.+.
T Consensus 83 ~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~--~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 83 RILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL--FATSEVREIAPNGQ 156 (276)
T ss_dssp EECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE--TTTTEEEEECTTSC
T ss_pred EECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe--cCCCEEEEECCCCC
Confidence 344567666554331 14788999876655555543221110 000 1 12234443322 2334444444332
Q ss_pred CcEEEEEEEcCCCCcccceEEeeCCEEEEEe-eCCeEEEEECCCCcEEE
Q 038747 289 MNWIQQFAIGPFLGVMSPRGIWKNNAVLMES-DNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 289 ~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~-~~~~l~~yd~~t~~~~~ 336 (401)
..|.... ...+ . -.....+|.+++.. ..++++.+|++|+++.+
T Consensus 157 ~~w~~~~--~~~~-~--~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 157 LLNSVKL--SGTP-F--SSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EEEEEEC--SSCC-C--EEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred EEEEEEC--CCCc-c--ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 3343221 1111 1 12334567777764 45579999999777644
No 91
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=51.21 E-value=1.2e+02 Score=26.14 Aligned_cols=180 Identities=12% Similarity=0.012 Sum_probs=89.8
Q ss_pred CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccc
Q 038747 117 DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRV 196 (401)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 196 (401)
...+.++|+.|++....-.... ... ++.+++..+ + ++.... ....+.+|+..++.-..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~---------~~~-~~~~s~dg~-~-l~~~~~----------~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGY---------DFV-DTAITSDCS-N-VVVTSD----------FCQTLVQIETQLEPPKV 76 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCC---------CEE-EEEECSSSC-E-EEEEES----------TTCEEEEEECSSSSCEE
T ss_pred CCeEEEEeCcccceeeeEEccC---------Ccc-eEEEcCCCC-E-EEEEeC----------CCCeEEEEECCCCceeE
Confidence 4689999999988754322211 122 667776543 2 332221 13378888888775310
Q ss_pred cCCCCcccceeeeCCCc--eeEECce-EEEEEeecCCCCccEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCe-EE
Q 038747 197 SKGNVEWIPYDFKSHFK--STNLNGV-FYWLVSRDDGDHSNIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNS-VS 270 (401)
Q Consensus 197 ~~~~~~~~~~~~~~~~~--~v~~~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~-L~ 270 (401)
.. ... ...... .+.-+|. +| .. .. ......|..+|+.+.+... ++..... ..+.. -+|+ |.
T Consensus 77 ~~-----~~~-~~~~~~~~~~s~dg~~l~-~~-~~-~~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~~~spdg~~l~ 143 (331)
T 3u4y_A 77 VA-----IQE-GQSSMADVDITPDDQFAV-TV-TG-LNHPFNMQSYSFLKNKFISTIPIPYDA----VGIAISPNGNGLI 143 (331)
T ss_dssp EE-----EEE-CSSCCCCEEECTTSSEEE-EC-CC-SSSSCEEEEEETTTTEEEEEEECCTTE----EEEEECTTSSCEE
T ss_pred Ee-----ccc-CCCCccceEECCCCCEEE-Ee-cC-CCCcccEEEEECCCCCeEEEEECCCCc----cceEECCCCCEEE
Confidence 00 000 001111 1222454 44 32 22 1111279999998776533 3332211 11222 2454 44
Q ss_pred EEeecCCCCe-EEEEEEcC-CcEEEE--EEEcCCCCcccceEEeeCCE-EEEEe-eCCeEEEEECCCCcE
Q 038747 271 LLHFDKSSHY-IDIWLMSD-MNWIQQ--FAIGPFLGVMSPRGIWKNNA-VLMES-DNGTLLLYDLIVEEV 334 (401)
Q Consensus 271 ~~~~~~~~~~-l~IW~l~~-~~W~~~--~~i~~~~~~~~p~~~~~~~~-il~~~-~~~~l~~yd~~t~~~ 334 (401)
+.. ..... +.+|.++. +.-... ..+.. .....-+++.++|+ +++.. ..+.+..||+++++.
T Consensus 144 ~~~--~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 144 LID--RSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEE--ETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EEe--cCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 433 34345 99999887 322111 22221 11233466777886 55554 466899999998874
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=50.55 E-value=1.2e+02 Score=25.83 Aligned_cols=67 Identities=9% Similarity=0.178 Sum_probs=40.1
Q ss_pred cccceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEE
Q 038747 107 PYDGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAI 186 (401)
Q Consensus 107 s~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (401)
|.+|+|....+.++.|||..|++...+-..... ......+.+.+.. .+-+ .+. ..-.+.+
T Consensus 34 S~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~-------~~~V~~v~~~~~~-~~l~--sgs----------~Dg~v~i 93 (318)
T 4ggc_A 34 SSGNVLAVALDNSVYLWSASSGDILQLLQMEQP-------GEYISSVAWIKEG-NYLA--VGT----------SSAEVQL 93 (318)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCST-------TCCEEEEEECTTS-SEEE--EEE----------TTSEEEE
T ss_pred CCCCEEEEEeCCEEEEEECCCCCEEEEEEecCC-------CCeEEEEEECCCC-CEEE--EEE----------CCCcEEE
Confidence 667888777788999999999987654222110 1234455666543 3322 221 1346788
Q ss_pred EEcCCCC
Q 038747 187 YTSTTDS 193 (401)
Q Consensus 187 yss~t~~ 193 (401)
++.+++.
T Consensus 94 w~~~~~~ 100 (318)
T 4ggc_A 94 WDVQQQK 100 (318)
T ss_dssp EETTTTE
T ss_pred eecCCce
Confidence 8887763
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=50.50 E-value=1.4e+02 Score=26.66 Aligned_cols=64 Identities=8% Similarity=-0.042 Sum_probs=38.5
Q ss_pred cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCC-EEEEE-eeCCeEEEEECCCCc
Q 038747 266 NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNN-AVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 266 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~-~il~~-~~~~~l~~yd~~t~~ 333 (401)
+|.+.+.. .....+.||-++... .+..+........-+++.+++ .+++. ..++.+..||+.+.+
T Consensus 274 ~~~~l~s~--~~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSS--GRDNTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEE--ESSSEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEE--eCCCCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 45544433 356679999876632 333333322223346777766 56555 557789999998765
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=50.21 E-value=1.4e+02 Score=26.58 Aligned_cols=92 Identities=2% Similarity=-0.096 Sum_probs=47.7
Q ss_pred cEEEEEEcCCceEeEe-cCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCc------------------EEE
Q 038747 234 NIMLSFHISDEEFREI-ERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMN------------------WIQ 293 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i-~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~------------------W~~ 293 (401)
..|..+|+.+.+.... ...... . ..+.. -+|.+.+.. .....+.||-++... +..
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~~~--i-~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDGVP--I-FAGRISQDGQKYAVA--FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL 384 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTTCC--E-EEEEECTTSSEEEEE--ETTSCEEEEECHHHHC--------------CEECCE
T ss_pred CcEEEEECCCCcEeEecccCCcc--E-EEEEEcCCCCEEEEE--ECCCeEEEEECCCCccceeeeecccccccCcccchh
Confidence 3889999977664332 221110 0 01222 134443333 345679999887611 113
Q ss_pred EEEEcCCCC--cccceEEeeCCEEEE-EeeCCeEEEEECC
Q 038747 294 QFAIGPFLG--VMSPRGIWKNNAVLM-ESDNGTLLLYDLI 330 (401)
Q Consensus 294 ~~~i~~~~~--~~~p~~~~~~~~il~-~~~~~~l~~yd~~ 330 (401)
+..+..... ...-+.+.+++..++ ...++.+..||++
T Consensus 385 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 385 YASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 333433221 233456666776554 4567778899875
No 95
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=49.86 E-value=1e+02 Score=26.40 Aligned_cols=110 Identities=8% Similarity=0.026 Sum_probs=55.6
Q ss_pred CceEEEE-------EeecCCCCccEEEEEEcCCceEeEecCCCCCCC-CCc-eeEE-Ec-CeEEEEeecCCCCeEEEEEE
Q 038747 218 NGVFYWL-------VSRDDGDHSNIMLSFHISDEEFREIERPRIPYS-SHE-SLGL-FN-NSVSLLHFDKSSHYIDIWLM 286 (401)
Q Consensus 218 ~G~lywl-------~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~-~~~-~l~~-~~-g~L~~~~~~~~~~~l~IW~l 286 (401)
+|.+|+. .... ..|..+|..++++..+..|..... ... .+.. -+ |.|.+.. . ...+.+|-.
T Consensus 28 ~g~l~~~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~--~-~~~l~~~d~ 99 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPA-----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD--M-RLGLLVVQT 99 (314)
T ss_dssp TSCEEEEETTCEETTEEC-----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE--T-TTEEEEEET
T ss_pred CCCEEEEEeccccCCCCC-----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE--C-CCCEEEEeC
Confidence 6788887 2222 389999998888877655321100 011 1332 23 5665544 1 223444433
Q ss_pred cCCcEEEE-EEEcCCCCcc--cceEEeeCCEEEEEeeC----------------CeEEEEECCCCcEEEE
Q 038747 287 SDMNWIQQ-FAIGPFLGVM--SPRGIWKNNAVLMESDN----------------GTLLLYDLIVEEVRDL 337 (401)
Q Consensus 287 ~~~~W~~~-~~i~~~~~~~--~p~~~~~~~~il~~~~~----------------~~l~~yd~~t~~~~~v 337 (401)
+ +..... .......... .-+++.++|.+++.... +.++.||++ ++++.+
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 3 332221 1100001112 23556668888887542 479999987 665544
No 96
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=49.84 E-value=1.3e+02 Score=26.07 Aligned_cols=111 Identities=6% Similarity=-0.023 Sum_probs=65.9
Q ss_pred ceEEEEEeecCCCCccEEEEEEcCCceE-eEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEE
Q 038747 219 GVFYWLVSRDDGDHSNIMLSFHISDEEF-REIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAI 297 (401)
Q Consensus 219 G~lywl~~~~~~~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i 297 (401)
|.+|--+... ....|..+|+.+.+- ..+++|.... ...+...++.|.+.. ..... +++.+-..-..+.+|
T Consensus 32 g~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~f--geGi~~~g~~lyv~t--~~~~~--v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 32 DTLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYF--GEGLTLLNEKLYQVV--WLKNI--GFIYDRRTLSNIKNF 102 (266)
T ss_dssp TEEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCC--EEEEEEETTEEEEEE--TTCSE--EEEEETTTTEEEEEE
T ss_pred CeEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcc--eEEEEEeCCEEEEEE--ecCCE--EEEEECCCCcEEEEE
Confidence 6777655321 225899999987764 4566665321 112555677776655 34443 555665444555566
Q ss_pred cCCCCcccceEEeeCC-EEEEEeeCCeEEEEECCCCc-EEEEeec
Q 038747 298 GPFLGVMSPRGIWKNN-AVLMESDNGTLLLYDLIVEE-VRDLGRF 340 (401)
Q Consensus 298 ~~~~~~~~p~~~~~~~-~il~~~~~~~l~~yd~~t~~-~~~v~~~ 340 (401)
... ...+.++..+| .+++....+.+..+|++|.+ .+.|...
T Consensus 103 ~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 103 THQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp ECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred ECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 432 12346666654 56776767789999999966 4555543
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=49.37 E-value=1.3e+02 Score=25.99 Aligned_cols=107 Identities=7% Similarity=-0.049 Sum_probs=55.4
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEe-EecCCCCCCCCCceeEE-EcCe-EEEEeecCCCCeEEEEEEcCCcEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFR-EIERPRIPYSSHESLGL-FNNS-VSLLHFDKSSHYIDIWLMSDMNWIQQ 294 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~-~i~lP~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~l~IW~l~~~~W~~~ 294 (401)
+|.+|...... ..|..+|+.+.+.. .++++.... ...+.. -+|+ +.+.. .....+.+|-++...-...
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~~~v~~--~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFG--PGTAMMAPDNRTAYVLN--NHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCS--SCEEEECTTSSEEEEEE--TTTTEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCC--CceeEECCCCCEEEEEe--CCCCcEEEEeCCCCcEEEE
Confidence 45555444333 48999999887653 456654111 111222 2454 33333 4456677776655433322
Q ss_pred EEEcCC----CCcccceEEeeCCEEEEE-ee------------CCeEEEEECCCCc
Q 038747 295 FAIGPF----LGVMSPRGIWKNNAVLME-SD------------NGTLLLYDLIVEE 333 (401)
Q Consensus 295 ~~i~~~----~~~~~p~~~~~~~~il~~-~~------------~~~l~~yd~~t~~ 333 (401)
..+... ......+++.++|+.++. .. .+.+..||+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 222110 001234677777765444 32 3789999998744
No 98
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=49.27 E-value=83 Score=31.58 Aligned_cols=109 Identities=8% Similarity=0.054 Sum_probs=51.6
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE--cCeEEEEeecCCCCeEEEEEEcCCcEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF--NNSVSLLHFDKSSHYIDIWLMSDMNWIQQF 295 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 295 (401)
+|.|||..... ...|..+++....-..+-. ..... ...|.+- ++.|.+.. .....|.+.-++. .-.+..
T Consensus 507 ~g~ly~td~~~----~~~I~~~~~dG~~~~~l~~-~~l~~-PnGlavd~~~~~LY~aD--~~~~~I~~~d~dG-~~~~~~ 577 (699)
T 1n7d_A 507 HGFMYWTDWGT----PAKIKKGGLNGVDIYSLVT-ENIQW-PNGITLDLLSGRLYWVD--SKLHSISSIDVNG-GNRKTI 577 (699)
T ss_dssp SSCCEECCCSS----SCCEEBCCSSSCCCCEESC-SSCSS-CCCEEECTTTCCEEEEE--TTTTEEEEECSSS-SCCEEE
T ss_pred CCcEEEcccCC----CCeEEEEeCCCCCeeEEEe-CCCCC-ccEEEEeccCCEEEEEe--cCCCeEEEEccCC-CceEEE
Confidence 68999975321 1378888876543333211 11110 1114442 45665544 3444443333322 111111
Q ss_pred EEcCCCCcccceEEee-CCEEEEEe-eCCeEEEEECCCCcEEE
Q 038747 296 AIGPFLGVMSPRGIWK-NNAVLMES-DNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 296 ~i~~~~~~~~p~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~ 336 (401)
+........|.++.- ++.||+.. ..+.|..+|..+++...
T Consensus 578 -~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 578 -LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp -CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred -EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 111112344554443 34666654 45689999988776544
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=48.62 E-value=1.4e+02 Score=26.32 Aligned_cols=56 Identities=13% Similarity=0.009 Sum_probs=33.5
Q ss_pred CCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcE
Q 038747 277 SSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEV 334 (401)
Q Consensus 277 ~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 334 (401)
....+.||-+.... .+..+........-+++.+++.+++. ..++.+..||+++++.
T Consensus 312 ~~~~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 312 YGSTIAVYTVYSGE--QITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp ETTEEEEEETTTCC--EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred cCCEEEEEECcCCc--ceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 34678888776632 33344333223334677777776665 5577899999988764
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=48.60 E-value=1.3e+02 Score=25.94 Aligned_cols=95 Identities=8% Similarity=0.062 Sum_probs=47.4
Q ss_pred cEEEEEEcCCce--EeEecCCCCCCCCCce-eE-----EEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCccc
Q 038747 234 NIMLSFHISDEE--FREIERPRIPYSSHES-LG-----LFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMS 305 (401)
Q Consensus 234 ~~Il~fD~~~e~--~~~i~lP~~~~~~~~~-l~-----~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~ 305 (401)
..|..+|+.+.. ...+..+......... +. ..+|.+.+.. .....+.+|-++...=. ..... .....
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~--~~~~~-~~~v~ 213 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG--YDNGDIKLFDLRNMALR--WETNI-KNGVC 213 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE--ETTSEEEEEETTTTEEE--EEEEC-SSCEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE--ccCCeEEEEECccCcee--eecCC-CCceE
Confidence 378888988764 3444333221111111 11 1345544433 35568999988772211 11111 11223
Q ss_pred ceEEee---CCEEEE-EeeCCeEEEEECCCCc
Q 038747 306 PRGIWK---NNAVLM-ESDNGTLLLYDLIVEE 333 (401)
Q Consensus 306 p~~~~~---~~~il~-~~~~~~l~~yd~~t~~ 333 (401)
-+.+.+ ++..++ ...++.+..||+++++
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 355555 455444 4567788899876543
No 101
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=48.59 E-value=30 Score=26.07 Aligned_cols=40 Identities=20% Similarity=0.325 Sum_probs=28.3
Q ss_pred CceEEEccccc-cccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEE
Q 038747 118 SLIFLWNPATK-ECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFIC 168 (401)
Q Consensus 118 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (401)
-.+++.||.|+ +|. |.... ...+.+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~--p~g~~---------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWV--PTSKH---------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEE--ESCSS---------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceE--eCCCC---------ceEEEEEEcCCCCEEEEEEcc
Confidence 36788999996 895 32221 134567789988899998864
No 102
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=48.19 E-value=1.5e+02 Score=26.31 Aligned_cols=177 Identities=9% Similarity=0.064 Sum_probs=89.5
Q ss_pred CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccc
Q 038747 117 DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRV 196 (401)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 196 (401)
+..+.+||..+++....-... ....++.+.+... + ++.... ....+.+|+..++.-..
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~-~-l~~~~~----------~d~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVG----------SNPMGAVISPDGT-K-VYVANA----------HSNDVSIIDTATNNVIA 68 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTSS-E-EEEEEG----------GGTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCeEEEEeecC----------CCcceEEECCCCC-E-EEEECC----------CCCeEEEEECCCCeEEE
Confidence 458899999988765432211 1124455555432 2 222211 13478888888765322
Q ss_pred cCCCCcccceeeeCCCceeEE--Cce-EEEEEeecCCCCccEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCe-EE
Q 038747 197 SKGNVEWIPYDFKSHFKSTNL--NGV-FYWLVSRDDGDHSNIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNS-VS 270 (401)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~-L~ 270 (401)
.-... . . -..+.+ +|. +|...... ..|..+|+.+.+... +...... ..+.. -+|+ |.
T Consensus 69 ~~~~~-~-~------v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~~~~----~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 69 TVPAG-S-S------PQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTGKSP----LGLALSPDGKKLY 131 (391)
T ss_dssp EEECS-S-S------EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSSSE----EEEEECTTSSEEE
T ss_pred EEECC-C-C------ccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCCCCc----ceEEECCCCCEEE
Confidence 11100 0 0 112222 344 33333221 389999998776543 2322111 11222 2444 33
Q ss_pred EEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEE-EE-eeCCeEEEEECCCCcEEEE
Q 038747 271 LLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVL-ME-SDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 271 ~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il-~~-~~~~~l~~yd~~t~~~~~v 337 (401)
+.. .....+.+|-++........... . ....+++.+++..+ +. ..++.+..||+++++....
T Consensus 132 ~~~--~~~~~v~~~d~~~~~~~~~~~~~--~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 132 VTN--NGDKTVSVINTVTKAVINTVSVG--R-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp EEE--TTTTEEEEEETTTTEEEEEEECC--S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEe--CCCCEEEEEECCCCcEEEEEecC--C-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 333 45678888877664443333221 1 12345666676544 44 3457899999998875443
No 103
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=48.15 E-value=1.2e+02 Score=25.40 Aligned_cols=192 Identities=6% Similarity=-0.067 Sum_probs=89.3
Q ss_pred EEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCC
Q 038747 112 FCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTT 191 (401)
Q Consensus 112 l~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t 191 (401)
|++.+...+..++.-++....+-..+.. ........++.+|+..+. +..... ....+.+|+..+
T Consensus 4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~~~~gi~~d~~~~~--ly~~d~----------~~~~I~~~~~~g 67 (267)
T 1npe_A 4 LLFAQTGKIERLPLERNTMKKTEAKAFL----HIPAKVIIGLAFDCVDKV--VYWTDI----------SEPSIGRASLHG 67 (267)
T ss_dssp EEEEEEEEEEEEEESSSCBCGGGCEEEE----EEEEEEEEEEEEETTTTE--EEEEET----------TTTEEEEEESSS
T ss_pred EEEEcCCeEEEEEecCcccccccceeee----cCCCCcEEEEEEecCCCE--EEEEEC----------CCCEEEEEecCC
Confidence 4444444666777655543322110000 001134567888876542 222210 134677787765
Q ss_pred CCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE--c
Q 038747 192 DSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF--N 266 (401)
Q Consensus 192 ~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~ 266 (401)
+.-+..... .+ ....++.+ +|.+||..... ..|..+|+....-..+ .+.... ....+..- +
T Consensus 68 ~~~~~~~~~--~~-----~~p~~ia~d~~~~~lyv~d~~~-----~~I~~~~~~g~~~~~~-~~~~~~-~P~~i~vd~~~ 133 (267)
T 1npe_A 68 GEPTTIIRQ--DL-----GSPEGIALDHLGRTIFWTDSQL-----DRIEVAKMDGTQRRVL-FDTGLV-NPRGIVTDPVR 133 (267)
T ss_dssp CCCEEEECT--TC-----CCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEE-ECSSCS-SEEEEEEETTT
T ss_pred CCcEEEEEC--CC-----CCccEEEEEecCCeEEEEECCC-----CEEEEEEcCCCCEEEE-EECCCC-CccEEEEeeCC
Confidence 432211100 10 11234444 57999976543 4899999976543333 121111 11114443 4
Q ss_pred CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccc--eEEee-CCEEEEEe-eCCeEEEEECCCCcEEEE
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSP--RGIWK-NNAVLMES-DNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p--~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~v 337 (401)
|.|.+.........+....++. .-.+.. .. .....| +++.+ ++.+++.. ..+.+..+|+.++..+.+
T Consensus 134 g~lyv~~~~~~~~~I~~~~~dg-~~~~~~-~~--~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMDG-TNRRIL-AQ--DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETTS-CCCEEE-EC--TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEecCC-CCcEEE-EE--CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 6666554211133443333333 222211 11 112234 55555 45676664 456899999987655444
No 104
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=47.83 E-value=1.4e+02 Score=25.87 Aligned_cols=206 Identities=11% Similarity=0.022 Sum_probs=99.5
Q ss_pred cccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceE
Q 038747 107 PYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLV 184 (401)
Q Consensus 107 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (401)
+.+|-|.+.+ ...++++||.+++...+..... ....++.+|+.. . ++.... ... .....+
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg-~--l~v~~~--~~~----~~~~~i 114 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---------ANPAAIKIHKDG-R--LFVCYL--GDF----KSTGGI 114 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---------SSEEEEEECTTS-C--EEEEEC--TTS----SSCCEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---------CCcceEEECCCC-c--EEEEeC--CCC----CCCceE
Confidence 3466665543 4589999999988776532111 124456667653 2 222211 000 012367
Q ss_pred EEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecC-CCCccEEEEEEcCCceEeEecCCCCCCCCCce
Q 038747 185 AIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDD-GDHSNIMLSFHISDEEFREIERPRIPYSSHES 261 (401)
Q Consensus 185 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~ 261 (401)
.+|+..++.-+...... . +. .....+.+ +|.+|....... ......|..+|..++++..+.-. .. ....
T Consensus 115 ~~~d~~~~~~~~~~~~~-~-~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~-~~~~ 186 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDL-S-TA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--IS-VANG 186 (333)
T ss_dssp EEECTTSCSCEEEECSS-S-SC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ES-SEEE
T ss_pred EEEeCCCCEEEEEEccC-c-cC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CC-cccc
Confidence 77877776543211100 0 00 00112222 577665443210 01124788999887666554210 00 0011
Q ss_pred eEE-EcCe-EEEEeecCCCCeEEEEEEcC--CcEEEEE-E--EcCCC-CcccceEEeeCCEEEEEee-CCeEEEEECCCC
Q 038747 262 LGL-FNNS-VSLLHFDKSSHYIDIWLMSD--MNWIQQF-A--IGPFL-GVMSPRGIWKNNAVLMESD-NGTLLLYDLIVE 332 (401)
Q Consensus 262 l~~-~~g~-L~~~~~~~~~~~l~IW~l~~--~~W~~~~-~--i~~~~-~~~~p~~~~~~~~il~~~~-~~~l~~yd~~t~ 332 (401)
+.. -+|+ |.+.. .....+.+|-++. ....... . ..... ....-+++.++|.+++... .+.+..||++.+
T Consensus 187 i~~~~dg~~l~v~~--~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 187 IALSTDEKVLWVTE--TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEECTTSSEEEEEE--GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred eEECCCCCEEEEEe--CCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 222 2344 44443 3345677777753 2222111 1 11111 1222366667888888764 468999999877
Q ss_pred cEEEEeec
Q 038747 333 EVRDLGRF 340 (401)
Q Consensus 333 ~~~~v~~~ 340 (401)
.++.+...
T Consensus 265 ~~~~~~~~ 272 (333)
T 2dg1_A 265 PIGQILIP 272 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 77777654
No 105
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=47.56 E-value=1.2e+02 Score=25.14 Aligned_cols=194 Identities=13% Similarity=0.048 Sum_probs=91.0
Q ss_pred eEEEeeCCceEEEcccc-ccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEc
Q 038747 111 IFCLCDDSLIFLWNPAT-KECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTS 189 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (401)
+++......+++||..+ ++...+...... .....+.+.|.. .+ ++.... .. .....+.+++.
T Consensus 55 ~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg-~~-l~~~~~--~~-----~~~~~l~~~~~ 117 (297)
T 2ojh_A 55 YLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPDG-AL-YAISDK--VE-----FGKSAIYLLPS 117 (297)
T ss_dssp EEEEEETTEEEEEESSSCCSCEECCCTTCC--------CBCSCCEECTTS-SE-EEEEEC--TT-----TSSCEEEEEET
T ss_pred EEEEEcCCeEEEEeCCCCCCceEecccccc--------ccccceEECCCC-CE-EEEEEe--CC-----CCcceEEEEEC
Confidence 34444567899999999 877766543211 111223444432 22 222211 01 12456666776
Q ss_pred CCCCccccCCCCcccceeeeCCCceeEECce-EEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcC
Q 038747 190 TTDSWRVSKGNVEWIPYDFKSHFKSTNLNGV-FYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNN 267 (401)
Q Consensus 190 ~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g 267 (401)
.++.-+.+.... .... ....-+|. +++..... ....|..+|+.+.....+..... .. ..+.. -+|
T Consensus 118 ~~~~~~~~~~~~---~~~~----~~~spdg~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~s~dg 184 (297)
T 2ojh_A 118 TGGTPRLMTKNL---PSYW----HGWSPDGKSFTYCGIRD---QVFDIYSMDIDSGVETRLTHGEG--RN-DGPDYSPDG 184 (297)
T ss_dssp TCCCCEECCSSS---SEEE----EEECTTSSEEEEEEEET---TEEEEEEEETTTCCEEECCCSSS--CE-EEEEECTTS
T ss_pred CCCceEEeecCC---Cccc----eEECCCCCEEEEEECCC---CceEEEEEECCCCcceEcccCCC--cc-ccceECCCC
Confidence 666544433211 1100 01111343 44333332 12366677777666554422111 00 11222 245
Q ss_pred eEEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEE-EEeeC-----------CeEEEEECCCCc
Q 038747 268 SVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVL-MESDN-----------GTLLLYDLIVEE 333 (401)
Q Consensus 268 ~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il-~~~~~-----------~~l~~yd~~t~~ 333 (401)
+..++.. .....+.||.++. ... ..+.........+.+.++|+.+ +.... ..+..||+++++
T Consensus 185 ~~l~~~~-~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 185 RWIYFNS-SRTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp SEEEEEE-CTTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CEEEEEe-cCCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 5333331 3355789999874 322 2222222122335566677644 43332 469999999988
Q ss_pred EEEEe
Q 038747 334 VRDLG 338 (401)
Q Consensus 334 ~~~v~ 338 (401)
.+.+.
T Consensus 261 ~~~~~ 265 (297)
T 2ojh_A 261 VETLF 265 (297)
T ss_dssp CEEEE
T ss_pred ceeee
Confidence 76554
No 106
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=47.07 E-value=1.3e+02 Score=25.54 Aligned_cols=65 Identities=14% Similarity=0.229 Sum_probs=42.9
Q ss_pred CeEEEEeecCCCCeEEEEEEcC-------CcEEEEEEEcCCCCcccceEEeeC--CEEEEE-eeCCeEEEEECCCCc
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSD-------MNWIQQFAIGPFLGVMSPRGIWKN--NAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~-------~~W~~~~~i~~~~~~~~p~~~~~~--~~il~~-~~~~~l~~yd~~t~~ 333 (401)
|.+.+.. .....+.||-++. ..|.....+........-+.+.++ +..++. ..++.+..||+++++
T Consensus 71 ~~~l~s~--~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASA--SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEE--ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEE--cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 5544433 3567899999976 457777776544333444666665 665554 667889999988765
No 107
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=46.85 E-value=1.7e+02 Score=26.66 Aligned_cols=96 Identities=17% Similarity=0.224 Sum_probs=51.3
Q ss_pred cEEEEEEcCCceE-eEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcC---CCCcccceEE
Q 038747 234 NIMLSFHISDEEF-REIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGP---FLGVMSPRGI 309 (401)
Q Consensus 234 ~~Il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~---~~~~~~p~~~ 309 (401)
..|..+|+.+.+. ..+..+.... ....-...++.+.+.. .....+.||-++.+.......... ......-+++
T Consensus 339 g~i~vwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQGPNKHQ-SAVTCLQFNKNFVITS--SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA 415 (445)
T ss_dssp SCEEEEETTTCCEEEEECSTTSCS-SCEEEEEECSSEEEEE--ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEccCCCCC-CCEEEEEECCCEEEEE--eCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEe
Confidence 3788999976553 3444433211 1111233355544433 466789999988754444332111 1112233566
Q ss_pred eeCCEEEEEe-eCC----eEEEEECCCC
Q 038747 310 WKNNAVLMES-DNG----TLLLYDLIVE 332 (401)
Q Consensus 310 ~~~~~il~~~-~~~----~l~~yd~~t~ 332 (401)
.+++.++... .++ ++..||.+..
T Consensus 416 s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 416 SNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred cCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 6677776653 334 3888887653
No 108
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=46.00 E-value=8.6 Score=35.26 Aligned_cols=108 Identities=10% Similarity=0.010 Sum_probs=41.3
Q ss_pred ceeEECceEEEEEeecCCCCccEEEEEEcCCce--EeEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC--
Q 038747 213 KSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEE--FREIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD-- 288 (401)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~--~~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~-- 288 (401)
.++..+|.+|.-..++ .|.++|..+++ |+. +. .... ......+|.+.+.. .....+..|-.+.
T Consensus 4 sP~v~~~~v~~gs~dg------~v~a~d~~tG~~~W~~-~~-~~~~---s~p~~~~g~~~v~~--s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG------SLHAVSKRTGSIKWTL-KE-DPVL---QVPTHVEEPAFLPD--PNDGSLYTLGSKNNE 70 (369)
T ss_dssp ----CTTEEEEEETTS------EEEEEETTTCCEEEEE-EC-CCSC---CCC-----CCEEEC--TTTCCEEEC-----C
T ss_pred CCeeeCCEEEEEcCCC------EEEEEECCCCCEEEEe-cC-CCce---ecceEcCCCEEEEe--CCCCEEEEEECCCCc
Confidence 4566788888766554 89999986654 443 32 1111 11122344443332 2334455555433
Q ss_pred CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEE
Q 038747 289 MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 289 ~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 335 (401)
..|........ .....|+. ..++.|++...++.++++|.+|++..
T Consensus 71 ~~w~~~~~~~~-~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~ 115 (369)
T 2hz6_A 71 GLTKLPFTIPE-LVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQ 115 (369)
T ss_dssp CSEECSCCHHH-HHTTCSCC------CCCCEEEEEEEEECCC-----
T ss_pred eeeeeeccCcc-ccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEE
Confidence 34543222110 00112221 12344444445556777777776653
No 109
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=45.91 E-value=2.2e+02 Score=27.68 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=60.4
Q ss_pred CceeEECceEEEEEeecCCCCccEEEEEEcCCc--eEeEe-cCCCCCC----CCCceeEEEcCeEEEEeecCCCCeEEEE
Q 038747 212 FKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDE--EFREI-ERPRIPY----SSHESLGLFNNSVSLLHFDKSSHYIDIW 284 (401)
Q Consensus 212 ~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e--~~~~i-~lP~~~~----~~~~~l~~~~g~L~~~~~~~~~~~l~IW 284 (401)
..++..+|.+|...... .|.++|..++ .|+.- ..|.... .....+.+.+|.+.+.. ... .|.
T Consensus 62 ~~P~v~~g~vyv~~~~~------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t---~dg--~l~ 130 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT---LDA--SVV 130 (582)
T ss_dssp CCCEEETTEEEEEETTT------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE---TTT--EEE
T ss_pred eccEEECCEEEEEcCCC------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe---CCC--EEE
Confidence 35788999999876544 6999998654 46553 2222111 00112455666665433 122 244
Q ss_pred EEcC----CcEEEEEEEcC-C-CCcccceEEee--CC--EEEEEee------CCeEEEEECCCCcEEEE
Q 038747 285 LMSD----MNWIQQFAIGP-F-LGVMSPRGIWK--NN--AVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 285 ~l~~----~~W~~~~~i~~-~-~~~~~p~~~~~--~~--~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
.++- ..|.....-.. . .....|+.... +| .|++... .+.+++||.+|++....
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 4443 45765321100 0 11234554322 23 4444332 57899999999997764
No 110
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=45.73 E-value=1.4e+02 Score=25.43 Aligned_cols=94 Identities=7% Similarity=-0.001 Sum_probs=51.7
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK 311 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~ 311 (401)
..|..+|+.+.+... +..+... ..+.. -+|...++. .....+.+|-++... ...+........-+.+.+
T Consensus 205 g~i~~~d~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~--~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDFTSQI----FSLGYCPTGEWLAVG--MESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAY 275 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSSCE----EEEEECTTSSEEEEE--ETTSCEEEEETTSSC---EEEECCCSSCEEEEEECT
T ss_pred CcEEEEECCCCceEeeecCCCce----EEEEECCCCCEEEEE--cCCCcEEEEECCCCC---eEEEcCCccceeEEEECC
Confidence 378899988765433 2322211 11222 234443333 345678888887722 112222222233456666
Q ss_pred CCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 312 NNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 312 ~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
++..++. ..++.+..||+++++...
T Consensus 276 ~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 276 CGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEecCCCcEEEEECCCCeEEE
Confidence 7766554 567789999999887653
No 111
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=45.67 E-value=1.7e+02 Score=26.28 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=55.2
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK 311 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~ 311 (401)
..|..+|+.+.+... +..+... ..+.. -+|...+.........+.||-+......+...+........-+.+.+
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQV----TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSCE----EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CEEEEEECCCCCEEEEEeCCCcE----EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 377788887655332 3222111 01221 24444333222467789999998876777666544332333466777
Q ss_pred CCEEEEE-eeCCeEEEEECCCCcEE
Q 038747 312 NNAVLME-SDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 312 ~~~il~~-~~~~~l~~yd~~t~~~~ 335 (401)
+|..++. ..++.+..||+.+++..
T Consensus 360 dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 360 DGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp TSSEEEEECTTSEEEEEECCC----
T ss_pred CCCEEEEEeCCCcEEEEECCCCccc
Confidence 7776665 56778999999887643
No 112
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=45.65 E-value=1.1e+02 Score=26.38 Aligned_cols=109 Identities=4% Similarity=-0.098 Sum_probs=55.5
Q ss_pred Cc-eEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEE
Q 038747 218 NG-VFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQF 295 (401)
Q Consensus 218 ~G-~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~ 295 (401)
+| .+||..... ..|..+|.. +....+..|.... ..+.. -+|+|.+.. .....+.+|-.+ +......
T Consensus 55 ~g~~l~~~d~~~-----~~i~~~~~~-g~~~~~~~~~~~~---~gl~~d~dG~l~v~~--~~~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 55 AQRTLVWSDLVG-----RRVLGWRED-GTVDVLLDATAFT---NGNAVDAQQRLVHCE--HGRRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp GGTEEEEEETTT-----TEEEEEETT-SCEEEEEESCSCE---EEEEECTTSCEEEEE--TTTTEEEEECTT-SCEEEEE
T ss_pred CCCEEEEEECCC-----CEEEEEeCC-CCEEEEeCCCCcc---ceeeECCCCCEEEEE--CCCCEEEEECCC-CCEEEEE
Confidence 44 488876443 478899984 4455544333210 01222 245654433 233344444332 3332221
Q ss_pred EEcCCCCc--ccceEEeeCCEEEEEe------------------eCCeEEEEECCCCcEEEEe
Q 038747 296 AIGPFLGV--MSPRGIWKNNAVLMES------------------DNGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 296 ~i~~~~~~--~~p~~~~~~~~il~~~------------------~~~~l~~yd~~t~~~~~v~ 338 (401)
........ ..-+.+.++|.+++.. ..+.++.||+++++++.+.
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 11110001 1236677788988842 1357999999888877654
No 113
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=45.55 E-value=1.5e+02 Score=25.63 Aligned_cols=112 Identities=15% Similarity=0.067 Sum_probs=67.1
Q ss_pred EECceEEEEEeecCCCCccEEEEEEcCCceE-eEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEE
Q 038747 216 NLNGVFYWLVSRDDGDHSNIMLSFHISDEEF-REIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQ 294 (401)
Q Consensus 216 ~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~ 294 (401)
+.+|.||--+... ....|..+|+.+++- ..+++|... ....+...+++|.+.. .... .+|+.+-..-.++
T Consensus 50 ~~~~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~lt--w~~~--~v~v~D~~t~~~~ 120 (262)
T 3nol_A 50 YRNGYFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLT--WKNG--LGFVWNIRNLRQV 120 (262)
T ss_dssp EETTEEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEE--SSSS--EEEEEETTTCCEE
T ss_pred EECCEEEEECCCC---CCceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEE--eeCC--EEEEEECccCcEE
Confidence 3477787766543 235899999987764 556776532 1122677788887655 3333 4555555444444
Q ss_pred EEEcCCCCcccceEEeeCC-EEEEEeeCCeEEEEECCCCcE-EEEee
Q 038747 295 FAIGPFLGVMSPRGIWKNN-AVLMESDNGTLLLYDLIVEEV-RDLGR 339 (401)
Q Consensus 295 ~~i~~~~~~~~p~~~~~~~-~il~~~~~~~l~~yd~~t~~~-~~v~~ 339 (401)
.+|.... .+.++..++ .+++......+..+|++|.+. +.|..
T Consensus 121 ~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 121 RSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 5554321 335555555 455556577899999998654 44444
No 114
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=45.42 E-value=2.4e+02 Score=28.03 Aligned_cols=97 Identities=9% Similarity=0.152 Sum_probs=51.5
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEEE---cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEE
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGLF---NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGI 309 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~~---~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~ 309 (401)
..|..+|+.+..... +..+... .. ..+... +|.+.+.. .....+.+|-+.... ....+.........+.+
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~~~l~~~--~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQER-GV-NYVDYYPLPDKPYMITA--SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVF 236 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTT-CC-CEEEECCSTTCCEEEEE--CTTSEEEEEETTTTE--EEEEEECCSSCEEEEEE
T ss_pred CeEEEEECCCCcceeEEecCCCC-CE-EEEEEEECCCCCEEEEE--eCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEE
Confidence 378888986554322 2221101 00 112221 45544443 456789999876633 22333322222334566
Q ss_pred eeCCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 310 WKNNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 310 ~~~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
.+++.+++. ..++.+..||+.+++...
T Consensus 237 ~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 237 HPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 677766555 456789999999876543
No 115
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=45.28 E-value=1.5e+02 Score=25.63 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=38.3
Q ss_pred CeEEEEeecCCCCeEEEEEEcC-C-----------cEEEEEEEcCCCCcccceEEeeC--CEEEEE-eeCCeEEEEECCC
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSD-M-----------NWIQQFAIGPFLGVMSPRGIWKN--NAVLME-SDNGTLLLYDLIV 331 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~-~-----------~W~~~~~i~~~~~~~~p~~~~~~--~~il~~-~~~~~l~~yd~~t 331 (401)
|.+.+.. .....+.+|-+.. . .......+........-+++.++ +.+++. ..++.+..||+++
T Consensus 241 ~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 GDLILSK--SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TTEEEEE--CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEE--ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 5443333 4677899999876 1 12233333322212233556666 777665 5567899999988
Q ss_pred Cc
Q 038747 332 EE 333 (401)
Q Consensus 332 ~~ 333 (401)
++
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 116
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=44.83 E-value=1.8e+02 Score=26.46 Aligned_cols=184 Identities=9% Similarity=0.001 Sum_probs=90.7
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcccc
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVS 197 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 197 (401)
..+.+||..+++.+.|.... .......+.|... +++.... .. ....+.+++..++.-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----------~~v~~~~~Spdg~--~la~~s~--~~------~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----------QPLMSPAWSPDGS--KLAYVTF--ES------GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----------SCEEEEEECTTSS--EEEEEEC--TT------SSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC----------CcceeeEEcCCCC--EEEEEEe--cC------CCcEEEEEECCCCcEEEe
Confidence 58899998776655543321 1233455555432 2333221 11 135788999988876544
Q ss_pred CCCCcccceeeeCCCceeE--ECce-EEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeE-EEcCeEEEEe
Q 038747 198 KGNVEWIPYDFKSHFKSTN--LNGV-FYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLG-LFNNSVSLLH 273 (401)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~~~~ 273 (401)
.... ... ..+. -+|. +.+..... ....|..+|+.+.+...+.-.. . ....+. .-+|+..++.
T Consensus 219 ~~~~--~~~------~~~~~spdg~~la~~~~~~---g~~~i~~~d~~~~~~~~l~~~~--~-~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 219 ASFP--RHN------GAPAFSPDGSKLAFALSKT---GSLNLYVMDLASGQIRQVTDGR--S-NNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp ECCS--SCE------EEEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEECCCCS--S-CEEEEEECTTSSEEEEE
T ss_pred ecCC--Ccc------cCEEEcCCCCEEEEEEecC---CCceEEEEECCCCCEEeCcCCC--C-cccceEECCCCCEEEEE
Confidence 3210 000 1111 1454 44444322 1247899999887765442211 1 111122 2245533333
Q ss_pred ecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEE-Eee---CCeEEEEECCCCcEEEEee
Q 038747 274 FDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLM-ESD---NGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 274 ~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~-~~~---~~~l~~yd~~t~~~~~v~~ 339 (401)
. .......||+++- +. ...+.........+.+.++|+.++ ... ...+..+|+++++.+.+..
T Consensus 285 s-~~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 285 S-DQAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp E-CTTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC
T ss_pred E-CCCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC
Confidence 2 2234456777664 22 112222111222355667776544 333 2479999999998876543
No 117
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=44.59 E-value=93 Score=27.92 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=37.7
Q ss_pred EEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEEEEee
Q 038747 281 IDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 281 l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~ 339 (401)
-.||+.+-.....+.++.... ..-+++.++|+.++....+.+..||.++++++.+..
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEE
Confidence 467777664455666665322 344677788776665444789999999996566655
No 118
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=44.55 E-value=1.7e+02 Score=26.02 Aligned_cols=26 Identities=4% Similarity=-0.052 Sum_probs=19.0
Q ss_pred eEEeeCCEEEEEe-eCCeEEEEECCCC
Q 038747 307 RGIWKNNAVLMES-DNGTLLLYDLIVE 332 (401)
Q Consensus 307 ~~~~~~~~il~~~-~~~~l~~yd~~t~ 332 (401)
+++.++|+++... .++.+..||+.++
T Consensus 389 ~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 389 AHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred eEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 4677788887764 4667888888775
No 119
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=44.36 E-value=2.7e+02 Score=28.33 Aligned_cols=155 Identities=8% Similarity=0.020 Sum_probs=78.6
Q ss_pred eEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEe
Q 038747 150 NAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVS 226 (401)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~ 226 (401)
..|+.+|...+ +|+... . ....+++++..+..-+.+... .+ ....++.+ +|.|||...
T Consensus 473 P~GLAvD~~~~--~LY~tD---~-------~~~~I~v~~ldG~~~~~l~~~--~l-----~~P~gIaVDp~~g~LYwtD~ 533 (791)
T 3m0c_C 473 PDGLAVDWIHS--NIYWTD---S-------VLGTVSVADTKGVKRKTLFRE--NG-----SKPRAIVVDPVHGFMYWTDW 533 (791)
T ss_dssp CCEEEEETTTT--EEEEEE---T-------TTTEEEEEETTSSSEEEEEEC--TT-----CCEEEEEEETTTTEEEEEEC
T ss_pred cceeeeeecCC--cEEEEe---c-------CCCeEEEEeCCCCeEEEEEeC--CC-----CCcceEEEecCCCCEEEecC
Confidence 45777777654 222221 1 134677777765443322111 01 11245555 589999864
Q ss_pred ecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCc
Q 038747 227 RDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGV 303 (401)
Q Consensus 227 ~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~ 303 (401)
.. ...|..+++....-..+-. .... ....|.+- +|.|.+.. .... .||+.+- +.-.++. +.....+
T Consensus 534 g~----~~~I~~~~~dG~~~~~lv~-~~l~-~P~GLavD~~~~~LYwaD--~~~~--~I~~~d~dG~~~~~v-~~~~~~l 602 (791)
T 3m0c_C 534 GT----PAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVD--SKLH--SISSIDVNGGNRKTI-LEDEKRL 602 (791)
T ss_dssp SS----SCEEEEEETTSCCEEEEEC-SSCS-CEEEEEEETTTTEEEEEE--TTTT--EEEEEETTSCSCEEE-EECTTTT
T ss_pred CC----CCeEEEEecCCCceEEEEe-CCCC-CceEEEEecCCCeEEEEe--CCCC--cEEEEecCCCceEEE-ecCCCcc
Confidence 32 1389999997665444321 1111 11114443 67776654 3444 4555543 2222211 1111224
Q ss_pred ccceEEee-CCEEEEEe-eCCeEEEEECCCCcE
Q 038747 304 MSPRGIWK-NNAVLMES-DNGTLLLYDLIVEEV 334 (401)
Q Consensus 304 ~~p~~~~~-~~~il~~~-~~~~l~~yd~~t~~~ 334 (401)
..|+++.- ++.||+.. ..+.+..+|..+++.
T Consensus 603 ~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 603 AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp SSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred CCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 46766654 55676664 456788999766643
No 120
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=44.15 E-value=1.7e+02 Score=25.75 Aligned_cols=69 Identities=9% Similarity=0.051 Sum_probs=42.6
Q ss_pred cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 266 NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 266 ~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
+|.+.+.. .....+.||-++. ..+.....+........-+.+.+++.+++. ..++.+..||.+++++..
T Consensus 116 ~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 116 SGNLLATC--SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp TSSEEEEE--ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEE--ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 34443333 4567899999987 556555555433322334566667766555 556778899988776543
No 121
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=43.97 E-value=2.4e+02 Score=27.58 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=59.6
Q ss_pred CceeEECceEEEEEe-ecCCCCccEEEEEEc-CCc--eEeEecCCCCCC--------CCCceeEE--EcCe----EEEEe
Q 038747 212 FKSTNLNGVFYWLVS-RDDGDHSNIMLSFHI-SDE--EFREIERPRIPY--------SSHESLGL--FNNS----VSLLH 273 (401)
Q Consensus 212 ~~~v~~~G~lywl~~-~~~~~~~~~Il~fD~-~~e--~~~~i~lP~~~~--------~~~~~l~~--~~g~----L~~~~ 273 (401)
..++..+|.+|.... .. .|.++|. .+. .|+. +++.... .....+.+ .+|. +.+..
T Consensus 56 ~tP~v~~g~vyv~~~~~~------~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN------NTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECSTTT------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCCCC------EEEEEeCCCCCcEEEEE-CCCCCccccccccccccccceEEEecCCcceeEEEEEc
Confidence 467888999998765 33 7999999 554 4554 3322110 00111444 4555 54332
Q ss_pred ecCCCCeEEEEEEcC----CcEEEEEEE-cCC-CCcccceEEeeCCEEEEEee------CCeEEEEECCCCcEEEE
Q 038747 274 FDKSSHYIDIWLMSD----MNWIQQFAI-GPF-LGVMSPRGIWKNNAVLMESD------NGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 274 ~~~~~~~l~IW~l~~----~~W~~~~~i-~~~-~~~~~p~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v 337 (401)
... .+..|+- ..|.....- ... .....|+.. ++.|++... .+.+.+||.+|++...-
T Consensus 129 ---~dg--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 129 ---LDG--NVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp ---TTS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ---CCC--EEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 122 3444442 456653210 000 112234432 567766543 57899999999987653
No 122
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=43.30 E-value=14 Score=22.34 Aligned_cols=21 Identities=33% Similarity=0.431 Sum_probs=15.4
Q ss_pred cCCccCCCCHHHHHHHHhcCC
Q 038747 6 DVDSSMLMPEDVRLEILSRLP 26 (401)
Q Consensus 6 ~~~~~~~LP~Dll~~IL~rLP 26 (401)
+...-..||.|+.+|||+--.
T Consensus 17 D~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 17 DQEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp CGGGTTTSCHHHHHHHTTCCC
T ss_pred CHHHHHHCcHHHHHHHHhcch
Confidence 445567899999999887544
No 123
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=42.93 E-value=1.8e+02 Score=25.94 Aligned_cols=105 Identities=7% Similarity=0.030 Sum_probs=55.8
Q ss_pred cEEEEEEcCCceEeEec-CCCCCCCCCceeE-EEcCeEEEEe-ecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEE
Q 038747 234 NIMLSFHISDEEFREIE-RPRIPYSSHESLG-LFNNSVSLLH-FDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGI 309 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~-~~~g~L~~~~-~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~ 309 (401)
..|..+|+.+.+....- ..... ..-..+. .-+|.+.+.. .......+.||-+.. ..=.....+.... ...-+++
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~ 275 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEG-TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS-GVLLPFF 275 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCS-SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS-SCEEEEE
T ss_pred CcEEEEeCCCCceeeeeccCCCC-CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC-ceeEEEE
Confidence 38899999876643322 22111 1011122 2245544332 114567899998877 3212223332222 1223556
Q ss_pred eeCCEEEE-Ee-eCCeEEEEECCCCc--EEEEeec
Q 038747 310 WKNNAVLM-ES-DNGTLLLYDLIVEE--VRDLGRF 340 (401)
Q Consensus 310 ~~~~~il~-~~-~~~~l~~yd~~t~~--~~~v~~~ 340 (401)
.+++..++ .. .++.+..||+++++ ++.+...
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 66766654 44 47789999999887 6666543
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=42.31 E-value=1.7e+02 Score=25.47 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=53.4
Q ss_pred EEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcC-CCCcccceEEeeC
Q 038747 235 IMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGP-FLGVMSPRGIWKN 312 (401)
Q Consensus 235 ~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~-~~~~~~p~~~~~~ 312 (401)
.|..+|+.+.+...+......... ..+.. -+|.+.+.. .....+.||-+....-. ...+.. ......-+.+.++
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i-~~~~~~pdg~~lasg--~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEY-SSGVLHKDSLLLALY--SPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCC-CEEEECTTSCEEEEE--CTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTT
T ss_pred cEEEEECCCCcEEEEEecCCCCce-EEEEECCCCCEEEEE--cCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCC
Confidence 788899987776443221111111 11222 245554443 56678999988773211 012222 1222334667778
Q ss_pred CEEEEEeeCCeEEEEECCCCc
Q 038747 313 NAVLMESDNGTLLLYDLIVEE 333 (401)
Q Consensus 313 ~~il~~~~~~~l~~yd~~t~~ 333 (401)
|..++...++.+..||+++++
T Consensus 226 g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 226 GYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp SSEEEEEESSBEEEEETTSST
T ss_pred CCEEEEEeCCeEEEEEcCCCC
Confidence 888777666699999998775
No 125
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=42.04 E-value=2e+02 Score=26.01 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=39.0
Q ss_pred EEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCE-EEEE-e-eCCeEEEEECCCCcEEEE
Q 038747 281 IDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNA-VLME-S-DNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 281 l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~-il~~-~-~~~~l~~yd~~t~~~~~v 337 (401)
=+||+.+-.....+.+|.. ......+.+.++|+ +++. . ..+.+..||.++++....
T Consensus 298 ~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 3689988877777777742 22334477778887 5555 3 367899999999886543
No 126
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=41.98 E-value=1.7e+02 Score=25.25 Aligned_cols=104 Identities=9% Similarity=0.028 Sum_probs=56.5
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcC--CcEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSD--MNWIQQ 294 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~ 294 (401)
+|.+||..... ..|..+|...+.-..+..+... ..+.. -+|+|.+.. .......|+.++. +.....
T Consensus 42 ~g~lyv~d~~~-----~~I~~~d~~g~~~~~~~~~~~p----~gia~~~dG~l~vad--~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 42 DGTIFVTNHEV-----GEIVSITPDGNQQIHATVEGKV----SGLAFTSNGDLVATG--WNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCCEEEEEECSSEE----EEEEECTTSCEEEEE--ECTTSCEEEEEECTTSCEEEE
T ss_pred CCCEEEEeCCC-----CeEEEECCCCceEEEEeCCCCc----eeEEEcCCCcEEEEe--ccCCcceEEEEcCCCCeEEEE
Confidence 68898876433 4899999987654444544211 11333 256765443 2222345666543 555444
Q ss_pred EEEcCCCCcccceEEeeCCEEEEEe-eCCeEEEEECCCCc
Q 038747 295 FAIGPFLGVMSPRGIWKNNAVLMES-DNGTLLLYDLIVEE 333 (401)
Q Consensus 295 ~~i~~~~~~~~p~~~~~~~~il~~~-~~~~l~~yd~~t~~ 333 (401)
..+. ......-++.+.++.+++.. ..+.++.+|+.+++
T Consensus 111 ~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 111 LTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 4432 11111123345566666665 46789999988754
No 127
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=40.84 E-value=43 Score=24.97 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=30.0
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEE
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFIC 168 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (401)
.+++++|.|++|. |..... .....+.+.+|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~------~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGP------QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSC------CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcee--ECCCCC------CCccEEEEEEeCCCCEEEEEEEE
Confidence 5788999999975 544210 01345778889999999998875
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=40.70 E-value=2e+02 Score=25.79 Aligned_cols=110 Identities=6% Similarity=-0.040 Sum_probs=58.0
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCce---eEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHES---LGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQ 293 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~---l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~ 293 (401)
+|.++.....+ ..|..+|+.+.+......+......... +.. -+|.+.+.. .....+.+|-++...-..
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~--~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ--MQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE--GGGTEEEEEETTTCCEEE
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE--CCCCEEEEEECCCceEEE
Confidence 45555443322 3688999988776543221111111111 222 245554444 455778899887633222
Q ss_pred EEEEcCCCCcccceEEeeCCEEE-EEe-eCCeEEEEECCCCcEEE
Q 038747 294 QFAIGPFLGVMSPRGIWKNNAVL-MES-DNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 294 ~~~i~~~~~~~~p~~~~~~~~il-~~~-~~~~l~~yd~~t~~~~~ 336 (401)
.+........-+++.+++..+ +.. .++.+..||+++++...
T Consensus 206 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 206 --TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp --EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 222212123345666666554 444 46789999998887543
No 129
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=39.83 E-value=3e+02 Score=27.59 Aligned_cols=197 Identities=7% Similarity=0.023 Sum_probs=95.1
Q ss_pred eeeccccceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcc
Q 038747 103 TLLGPYDGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHS 182 (401)
Q Consensus 103 ~~~~s~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 182 (401)
.+....+|.|.+.....++.+|+.|+++..++..... ... ....+..|+.. ++ .+.. ..
T Consensus 92 ~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~-----~~~-~i~~i~~d~~g---~l-wi~t-----------~~ 150 (795)
T 4a2l_A 92 IVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKNG-----KHL-QVNGIEEISPE---QL-LIST-----------PE 150 (795)
T ss_dssp EEEECTTSCEEEEESSCEEEEETTTTEEEEECCEETT-----EEC-CCCEEEEEETT---EE-EEEE-----------TT
T ss_pred EEEECCCCCEEEEeCCchheeCCCCCeEEeccccccC-----CCc-eEEEEEECCCC---CE-EEEE-----------CC
Confidence 3445567777777667788899988887766543221 000 01122223211 11 1111 23
Q ss_pred eEEEEEcCCCCccccCCCCcccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCc
Q 038747 183 LVAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHE 260 (401)
Q Consensus 183 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~ 260 (401)
.+..|+.+++..+..... .+.. ..-..++. +|.++ +.... ..|..||..++++..+..... ....
T Consensus 151 gl~~~~~~~~~~~~~~~~---~~~~--~~i~~i~~d~~g~lw-igt~~-----~Gl~~~~~~~~~~~~~~~~~~--~~~i 217 (795)
T 4a2l_A 151 GLIMFDIKESKFIDDSFS---TAMH--KTIASTLYRQGDQIY-IGTST-----DGLYTYSITQKTFEKVIPILG--TKQI 217 (795)
T ss_dssp EEEEEETTTTEEECSSSC---HHHH--TCCEEEEEEETTEEE-EEESS-----SCEEEEETTTCCEEECC------CCCE
T ss_pred ceEEEECCCCEEEeccCC---CCCC--cceEEEEECCCCCEE-EEECC-----CCEEEEeCCCCeEEEecCCCC--CCee
Confidence 567778777766544321 1100 00122333 56654 44332 268899999988876531111 1111
Q ss_pred -ee-EEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcC---C---CCcccceEEeeCCEEEEEeeCCeEEEEECCCC
Q 038747 261 -SL-GLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGP---F---LGVMSPRGIWKNNAVLMESDNGTLLLYDLIVE 332 (401)
Q Consensus 261 -~l-~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~---~---~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~ 332 (401)
.+ ...+|.|-+.. ....+-.+-.+...+.... ..+ . .....-+...++|.|++.+.. .+..||++++
T Consensus 218 ~~i~~d~~g~lwigt---~~~Gl~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~ 292 (795)
T 4a2l_A 218 QAILQQSPTRIWVAT---EGAGLFLINPKTKEIKNYL-HSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTD 292 (795)
T ss_dssp EEEEEEETTEEEEEE---BSSCEEEEETTTTEEEEEC-CCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred EEEEEcCCCCEEEEE---CCCCeEEEeCCCCeEEEee-cCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCC
Confidence 12 22345554433 1112322222223343321 111 0 011222334447888887766 6999999999
Q ss_pred cEEEEe
Q 038747 333 EVRDLG 338 (401)
Q Consensus 333 ~~~~v~ 338 (401)
+++.+.
T Consensus 293 ~~~~~~ 298 (795)
T 4a2l_A 293 SFASYS 298 (795)
T ss_dssp EEEEEC
T ss_pred eEEEEe
Confidence 888764
No 130
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=39.44 E-value=2.8e+02 Score=27.08 Aligned_cols=207 Identities=9% Similarity=-0.009 Sum_probs=0.0
Q ss_pred cccceEEEeeC-----------------------------------CceEEEccccccccccCCCCCCCCCcceeeeeeE
Q 038747 107 PYDGIFCLCDD-----------------------------------SLIFLWNPATKECRTLPNYSNFLPTCATFLYENA 151 (401)
Q Consensus 107 s~~GLl~~~~~-----------------------------------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~ 151 (401)
|-+|-.++... ..+++||..+++...+....... ....
T Consensus 189 SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~-------~~~~ 261 (706)
T 2z3z_A 189 SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE-------KFLT 261 (706)
T ss_dssp CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT-------CEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc-------eeEe
Q ss_pred EEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCC-CccccCCCCcccceeeeCCCceeEE----CceEEEEEe
Q 038747 152 IFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTD-SWRVSKGNVEWIPYDFKSHFKSTNL----NGVFYWLVS 226 (401)
Q Consensus 152 ~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~-~W~~~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~ 226 (401)
.+.+.|..+ +++......... ...+.+++..++ ..+.+.. .....+......+.+ +|.+.+...
T Consensus 262 ~~~~spdg~--~l~~~~~~~~~~------~~~v~~~d~~~g~~~~~~~~---~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 262 NLSWSPDEN--ILYVAEVNRAQN------ECKVNAYDAETGRFVRTLFV---ETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp EEEECTTSS--EEEEEEECTTSC------EEEEEEEETTTCCEEEEEEE---EECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred eEEEECCCC--EEEEEEeCCCCC------eeEEEEEECCCCceeeEEEE---ccCCCeECccCCceeecCCCCEEEEEEc
Q ss_pred ecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCCCcc
Q 038747 227 RDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFLGVM 304 (401)
Q Consensus 227 ~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~ 304 (401)
.+ ....|..+|...+....+...............-++.|.+...........||.++- +....+. ...-.
T Consensus 331 ~~---g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~~~~~ 403 (706)
T 2z3z_A 331 RD---GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT----PESGM 403 (706)
T ss_dssp TT---SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC----CSSSE
T ss_pred cC---CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc----CCCce
Q ss_pred cceEEeeCCEEEEEeeC-----CeEEEEECCCCcEEEEe
Q 038747 305 SPRGIWKNNAVLMESDN-----GTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 305 ~p~~~~~~~~il~~~~~-----~~l~~yd~~t~~~~~v~ 338 (401)
..+.+.++|+.++.... ..+..+|+++++.+.+.
T Consensus 404 ~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~ 442 (706)
T 2z3z_A 404 HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLE 442 (706)
T ss_dssp EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEE
T ss_pred EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeecc
No 131
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=39.12 E-value=48 Score=26.59 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=27.5
Q ss_pred ceEEEccccc-cccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEE
Q 038747 119 LIFLWNPATK-ECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFIC 168 (401)
Q Consensus 119 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (401)
.+++.||.|+ +|.. .... ...+.+-+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP--~g~~---------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVP--TSKH---------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEE--SCSS---------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceee--cCCC---------CeEEEEEEcCCCCEEEEEEcc
Confidence 5788999997 8853 2221 124556689988899998864
No 132
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=38.57 E-value=1.8e+02 Score=24.48 Aligned_cols=183 Identities=8% Similarity=-0.034 Sum_probs=0.0
Q ss_pred eEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcC
Q 038747 111 IFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTST 190 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~ 190 (401)
++....+..+.+|| +++....-.... .....+.+.+..+.+-++.-. .-.+.+|+.+
T Consensus 117 l~~~~~d~~i~~~d--~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~------------d~~i~i~d~~ 173 (313)
T 3odt_A 117 VISGSWDKTAKVWK--EGSLVYNLQAHN---------ASVWDAKVVSFSENKFLTASA------------DKTIKLWQND 173 (313)
T ss_dssp EEEEETTSEEEEEE--TTEEEEEEECCS---------SCEEEEEEEETTTTEEEEEET------------TSCEEEEETT
T ss_pred EEEEeCCCCEEEEc--CCcEEEecccCC---------CceeEEEEccCCCCEEEEEEC------------CCCEEEEecC
Q ss_pred CCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCeEE
Q 038747 191 TDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNSVS 270 (401)
Q Consensus 191 t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~ 270 (401)
...-............ -...-+|.+.--..++ .|..+|+.+.+ ....+.............-+|.|.
T Consensus 174 ~~~~~~~~~~~~~i~~------~~~~~~~~~~~~~~dg------~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~l~ 240 (313)
T 3odt_A 174 KVIKTFSGIHNDVVRH------LAVVDDGHFISCSNDG------LIKLVDMHTGD-VLRTYEGHESFVYCIKLLPNGDIV 240 (313)
T ss_dssp EEEEEECSSCSSCEEE------EEEEETTEEEEEETTS------EEEEEETTTCC-EEEEEECCSSCEEEEEECTTSCEE
T ss_pred ceEEEEeccCcccEEE------EEEcCCCeEEEccCCC------eEEEEECCchh-hhhhhhcCCceEEEEEEecCCCEE
Q ss_pred EEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcE
Q 038747 271 LLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEV 334 (401)
Q Consensus 271 ~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~ 334 (401)
... ....+.||-++...-.......... ..-+++.+++.++....++.+..||++++++
T Consensus 241 ~~~---~dg~v~iwd~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 241 SCG---EDRTVRIWSKENGSLKQVITLPAIS--IWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEE---TTSEEEEECTTTCCEEEEEECSSSC--EEEEEECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred EEe---cCCEEEEEECCCCceeEEEeccCce--EEEEEEccCCCEEEEeCCCcEEEEeCCCCce
No 133
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=37.97 E-value=2.1e+02 Score=25.29 Aligned_cols=60 Identities=13% Similarity=0.250 Sum_probs=37.7
Q ss_pred CCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 277 SSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 277 ~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
....+.||-++. .................-+++.++|..++. ..++.+..||+++++...
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 556799999877 223333332222222344677778877666 456779999999887544
No 134
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=37.58 E-value=2.4e+02 Score=25.72 Aligned_cols=188 Identities=6% Similarity=-0.036 Sum_probs=91.8
Q ss_pred ceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEc
Q 038747 110 GIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTS 189 (401)
Q Consensus 110 GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (401)
..|++.....+...++.+++...+-+. .....++.+|+..+. |..... ....+..++.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~----------~~~~~~l~~d~~~~~--lywsD~----------~~~~I~~~~~ 141 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPN----------LRNVVALDTEVASNR--IYWSDL----------SQRMICSTQL 141 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECS----------CSCEEEEEEETTTTE--EEEEET----------TTTEEEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEeccc----------cCcceEEeeeeccCc--eEEEec----------CCCeEEEEEc
Confidence 456666667777777776655544211 124567888876552 222210 1234555555
Q ss_pred CCCC----ccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCcee
Q 038747 190 TTDS----WRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESL 262 (401)
Q Consensus 190 ~t~~----W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l 262 (401)
.+.. ...+... .+ ....++.+ +|.|||..... ..|..+|+....-..+- ..... ....+
T Consensus 142 ~g~~~~~~~~~~~~~--~~-----~~p~glavD~~~~~lY~~d~~~-----~~I~~~~~~g~~~~~l~-~~~~~-~P~~i 207 (400)
T 3p5b_L 142 DRAHGVSSYDTVISR--DI-----QAPDGLAVDWIHSNIYWTDSVL-----GTVSVADTKGVKRKTLF-RENGS-KPRAI 207 (400)
T ss_dssp ------CCCEEEECS--SC-----SCEEEEEEETTTTEEEEEETTT-----TEEEEECTTTCSEEEEE-ECSSC-CEEEE
T ss_pred ccCCCCCcceEEEeC--CC-----CCcccEEEEecCCceEEEECCC-----CeEEEEeCCCCceEEEE-eCCCC-CcceE
Confidence 4311 1111110 01 11134443 68999986543 48999999876544431 11111 01114
Q ss_pred EEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEee-CCEEEEEe-eCCeEEEEECCCCcEE
Q 038747 263 GLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIWK-NNAVLMES-DNGTLLLYDLIVEEVR 335 (401)
Q Consensus 263 ~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~ 335 (401)
.+- +|.|.+... .... .|++.+- +.-.+.. +. ..+..| +++.. ++.|++.. ....+..+|++....+
T Consensus 208 avdp~~g~ly~td~-~~~~--~I~~~~~dG~~~~~~-~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (400)
T 3p5b_L 208 VVDPVHGFMYWTDW-GTPA--KIKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 281 (400)
T ss_dssp EEETTTTEEEEEEC-SSSC--CEEEEETTSCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCE
T ss_pred EEecccCeEEEEeC-CCCC--EEEEEeCCCCccEEE-EE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccE
Confidence 442 566654431 1123 3555543 2222211 11 123445 55553 67777764 4567999999877666
Q ss_pred EEee
Q 038747 336 DLGR 339 (401)
Q Consensus 336 ~v~~ 339 (401)
.+-.
T Consensus 282 ~~~~ 285 (400)
T 3p5b_L 282 TILE 285 (400)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 135
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=36.13 E-value=2.6e+02 Score=25.65 Aligned_cols=120 Identities=12% Similarity=0.080 Sum_probs=68.3
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEe---cC-C-----CCCCCCC-ceeEEE--cCeEEEEee-c----CCCCe
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREI---ER-P-----RIPYSSH-ESLGLF--NNSVSLLHF-D----KSSHY 280 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i---~l-P-----~~~~~~~-~~l~~~--~g~L~~~~~-~----~~~~~ 280 (401)
+|.++|.+..+ .+..+|+.++.-..+ .+ . ....... ..+.+- +++|.+... + .....
T Consensus 237 dG~~~~vs~~g------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 237 AGRLVWPTYTG------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTEEEEEBTTS------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCcEEEEeCCC------EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 78999987655 899999987753322 11 0 0000001 112322 345654331 1 11234
Q ss_pred EEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCE-EEEE-ee-CCeEEEEECCCCcE-EEEeeccCCCCC
Q 038747 281 IDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNA-VLME-SD-NGTLLLYDLIVEEV-RDLGRFTRGTLG 346 (401)
Q Consensus 281 l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~-il~~-~~-~~~l~~yd~~t~~~-~~v~~~~~~~~~ 346 (401)
=+||+++-..+..+.+|.... -..-+++..+++ .++. +. .+.+.+||..++++ +.+... +.+.
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~--~~p~ 377 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL--GHGP 377 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC--CSSC
T ss_pred CEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC--CCCc
Confidence 789999987677777665321 112377777775 5444 33 67899999988875 555555 5544
No 136
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=35.78 E-value=2.5e+02 Score=25.39 Aligned_cols=192 Identities=10% Similarity=0.048 Sum_probs=91.4
Q ss_pred ccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 106 GPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 106 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
+..+|.|...+ ...++.+++.++....+-.... ....|+.+|+..+. ++... . ....
T Consensus 124 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~--lY~~d---~-------~~~~ 182 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDK--LYWTD---S-------GTSR 182 (386)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC---------SCCCCEEEETTTTE--EEEEE---T-------TTTE
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC---------CCccEEEEEeCCCe--EEEEc---C-------CCCe
Confidence 34567666665 3477778887765444322221 12245666765442 22221 0 1335
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCc
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHE 260 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~ 260 (401)
+++++..+..-+.+... .+ ....++.+ +|.|||..... ...|..+|+....-..+-- .... ...
T Consensus 183 I~~~~~dg~~~~~l~~~--~l-----~~P~giavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~-~~~~-~Pn 249 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQ--SL-----EKPRAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIAD-THLF-WPN 249 (386)
T ss_dssp EEECBTTSCSCEEEECS--SC-----SCEEEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEEC-SSCS-CEE
T ss_pred EEEEeCCCCceEEeecC--CC-----CCCcEEEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEE-CCCC-Cee
Confidence 66666554321111110 10 11134444 58999976432 2489999997654433311 1111 011
Q ss_pred eeEEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEe-eCCEEEEEe-eCCeEEEEECCC-CcE
Q 038747 261 SLGLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIW-KNNAVLMES-DNGTLLLYDLIV-EEV 334 (401)
Q Consensus 261 ~l~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~-~~~~il~~~-~~~~l~~yd~~t-~~~ 334 (401)
.|..- ++.|.+.. .... .|++.+- +.-.+.. +. .....|.++. .++.+++.. ..+.+..+|..+ +..
T Consensus 250 Glavd~~~~~lY~aD--~~~~--~I~~~d~dG~~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 250 GLTIDYAGRRMYWVD--AKHH--VIERANLDGSHRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp EEEEEGGGTEEEEEE--TTTT--EEEEECTTSCSCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred eEEEeCCCCEEEEEE--CCCC--EEEEEeCCCCeeEEE-EE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcce
Confidence 14443 66776554 4444 4455443 2111111 11 1134564443 356776664 466899999544 444
Q ss_pred EEEe
Q 038747 335 RDLG 338 (401)
Q Consensus 335 ~~v~ 338 (401)
+.+.
T Consensus 323 ~~i~ 326 (386)
T 3v65_B 323 EIIR 326 (386)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5554
No 137
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=35.76 E-value=3.7e+02 Score=27.35 Aligned_cols=114 Identities=8% Similarity=-0.025 Sum_probs=60.9
Q ss_pred ceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE--EcCeEEEEeecCCCCeEEEEEEc
Q 038747 213 KSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL--FNNSVSLLHFDKSSHYIDIWLMS 287 (401)
Q Consensus 213 ~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~--~~g~L~~~~~~~~~~~l~IW~l~ 287 (401)
.++.+ +|.|||.-... ..|.++|+....-..+-. .... ....|++ .+|.|.+.. ... .-.||+..
T Consensus 474 ~GLAvD~~~~~LY~tD~~~-----~~I~v~~ldG~~~~~l~~-~~l~-~P~gIaVDp~~g~LYwtD--~g~-~~~I~~~~ 543 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVL-----GTVSVADTKGVKRKTLFR-ENGS-KPRAIVVDPVHGFMYWTD--WGT-PAKIKKGG 543 (791)
T ss_dssp CEEEEETTTTEEEEEETTT-----TEEEEEETTSSSEEEEEE-CTTC-CEEEEEEETTTTEEEEEE--CSS-SCEEEEEE
T ss_pred ceeeeeecCCcEEEEecCC-----CeEEEEeCCCCeEEEEEe-CCCC-CcceEEEecCCCCEEEec--CCC-CCeEEEEe
Confidence 44554 47999986543 589999998665444321 1111 0112444 346666544 222 12455554
Q ss_pred C-CcEEEEEEEcCCCCcccceE--Ee-eCCEEEEEe-eCCeEEEEECCCCcEEEEee
Q 038747 288 D-MNWIQQFAIGPFLGVMSPRG--IW-KNNAVLMES-DNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 288 ~-~~W~~~~~i~~~~~~~~p~~--~~-~~~~il~~~-~~~~l~~yd~~t~~~~~v~~ 339 (401)
- +.-.+.. +. ..+..|.+ +. .++.||+.. ....+..+|+..+..+.+..
T Consensus 544 ~dG~~~~~l-v~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~ 597 (791)
T 3m0c_C 544 LNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 597 (791)
T ss_dssp TTSCCEEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred cCCCceEEE-Ee--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec
Confidence 3 2222211 11 22445644 44 367787764 35579999998777666643
No 138
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=33.98 E-value=2.5e+02 Score=24.94 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=49.9
Q ss_pred cEEEEEEcCCce--EeEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC-CcEEEEEE------EcCCCCcc
Q 038747 234 NIMLSFHISDEE--FREIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFA------IGPFLGVM 304 (401)
Q Consensus 234 ~~Il~fD~~~e~--~~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~------i~~~~~~~ 304 (401)
..|..+|+.+.. ...+..... ..-..+...+|.+.+.. .....+.||-+.+ ..-..... +.......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~l~s~--~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v 388 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG--TPINNVYFAAGALFVSS--GFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV 388 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT--SCEEEEEEETTEEEEEE--TTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC
T ss_pred CeEEEEEcCCCcCchhhhhccCC--CCceEEEeCCCCEEEEe--cCCccEEEEeccCCCCCccceeccCccEEccCCcce
Confidence 378889997753 223322111 00011344456654443 5677899999987 11111111 11111122
Q ss_pred cceEEeeCCE----EEEEeeCCeEEEEECCC
Q 038747 305 SPRGIWKNNA----VLMESDNGTLLLYDLIV 331 (401)
Q Consensus 305 ~p~~~~~~~~----il~~~~~~~l~~yd~~t 331 (401)
.-+++.+++. ++.....+.+..|+++.
T Consensus 389 ~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 389 SQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 3356666555 77778888899999865
No 139
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=33.13 E-value=3.3e+02 Score=27.17 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=30.6
Q ss_pred ceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEe-cCCCCCCCCCceeEEEcCeEEEEe
Q 038747 213 KSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREI-ERPRIPYSSHESLGLFNNSVSLLH 273 (401)
Q Consensus 213 ~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~~~~ 273 (401)
.++.+ +|.|||.-... ..|.++|+....-..+ ..+.... ....|.+.++.|.+..
T Consensus 543 nGlavd~~~~~LY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~~-~P~glavd~~~lywtd 601 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLA-HPFSLAVFEDKVFWTD 601 (699)
T ss_dssp CCEEECTTTCCEEEEETTT-----TEEEEECSSSSCCEEECCCSSSCS-SCCCCEEETTEEEEEC
T ss_pred cEEEEeccCCEEEEEecCC-----CeEEEEccCCCceEEEEecCCcCC-CceEeEEECCEEEEEe
Confidence 45665 48999986443 5899999976444333 2221111 1112666677665443
No 140
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=32.86 E-value=2.8e+02 Score=25.02 Aligned_cols=87 Identities=15% Similarity=0.157 Sum_probs=53.1
Q ss_pred EeEecCCCCCCCCCceeEEE--cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCC
Q 038747 246 FREIERPRIPYSSHESLGLF--NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNG 322 (401)
Q Consensus 246 ~~~i~lP~~~~~~~~~l~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~ 322 (401)
++.+..|.-..+.+..++.. ++.|++ . .+..+.||-.+.+.-.+...+........-+++.++|..++. ..++
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAv-g---ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg 169 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAV-A---LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA 169 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEE-E---ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEECCCCcccccceeEEECCCCEEEE-E---eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC
Confidence 45566776555444444433 233433 2 246899998777665555554332223345777788877665 5677
Q ss_pred eEEEEECCCCcEEE
Q 038747 323 TLLLYDLIVEEVRD 336 (401)
Q Consensus 323 ~l~~yd~~t~~~~~ 336 (401)
.+..||+++++...
T Consensus 170 ~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 170 EVQLWDVQQQKRLR 183 (420)
T ss_dssp CEEEEETTTTEEEE
T ss_pred eEEEEEcCCCcEEE
Confidence 89999999887543
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=32.72 E-value=2.3e+02 Score=24.14 Aligned_cols=95 Identities=9% Similarity=-0.070 Sum_probs=51.9
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCe-EEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccc-eEE
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNS-VSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSP-RGI 309 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p-~~~ 309 (401)
..|..+|+.+++... +..+... . .+.. -+|+ |.+.. .....+.+|-++.+.- ....+.... .... +++
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~~--~--~~~~s~dg~~l~~~~--~~~~~i~~~d~~~~~~-~~~~~~~~~-~~~~~~~~ 91 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYDF--V--DTAITSDCSNVVVTS--DFCQTLVQIETQLEPP-KVVAIQEGQ-SSMADVDI 91 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCCE--E--EEEECSSSCEEEEEE--STTCEEEEEECSSSSC-EEEEEEECS-SCCCCEEE
T ss_pred CeEEEEeCcccceeeeEEccCCc--c--eEEEcCCCCEEEEEe--CCCCeEEEEECCCCce-eEEecccCC-CCccceEE
Confidence 489999998877644 3443211 1 2222 2455 43433 3445666666655332 122222211 1223 667
Q ss_pred eeCCEEEEEeeCC----eEEEEECCCCcEEE
Q 038747 310 WKNNAVLMESDNG----TLLLYDLIVEEVRD 336 (401)
Q Consensus 310 ~~~~~il~~~~~~----~l~~yd~~t~~~~~ 336 (401)
.++|..++..... .+..||+++++...
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 7777765554443 79999999887644
No 142
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=32.65 E-value=2.6e+02 Score=24.65 Aligned_cols=53 Identities=6% Similarity=-0.075 Sum_probs=29.9
Q ss_pred CCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee-CCEEEEE-eeCCeEEEEECCCC
Q 038747 277 SSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK-NNAVLME-SDNGTLLLYDLIVE 332 (401)
Q Consensus 277 ~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~-~~~~~l~~yd~~t~ 332 (401)
....+.||-++.+. ....+. ......-+++.+ ++.+|.. ..++.+..||+.++
T Consensus 290 ~D~~i~iwd~~~~~--~~~~~~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 290 EDCTVAVLDADFSE--VFRDLS-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEECTTSCE--EEEECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEECCCCc--EeEECC-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 45678999665532 222222 122233466665 6666665 56788999998654
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=32.51 E-value=2.3e+02 Score=24.03 Aligned_cols=98 Identities=10% Similarity=-0.001 Sum_probs=49.8
Q ss_pred EEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCC
Q 038747 235 IMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNN 313 (401)
Q Consensus 235 ~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~ 313 (401)
.|..+|+.+.+...+.++...... ..+.. -+|+..++. ...+.+|-++... ....+.... ...-+++.++|
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~----~~~v~~~d~~~~~--~~~~~~~~~-~~~~~~~s~dg 291 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFY-FSTAVNPAKTRAFGA----YNVLESFDLEKNA--SIKRVPLPH-SYYSVNVSTDG 291 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCE-EEEEECTTSSEEEEE----ESEEEEEETTTTE--EEEEEECSS-CCCEEEECTTS
T ss_pred ceEEEeCCCCCceEeecCCCCCce-eeEEECCCCCEEEEe----CCeEEEEECCCCc--CcceecCCC-ceeeEEECCCC
Confidence 588999988876544443211100 01221 133332221 2456666555432 222332111 12235667777
Q ss_pred E-EEEEeeCCeEEEEECCCCcE-EEEeec
Q 038747 314 A-VLMESDNGTLLLYDLIVEEV-RDLGRF 340 (401)
Q Consensus 314 ~-il~~~~~~~l~~yd~~t~~~-~~v~~~ 340 (401)
+ ++....++.+..||+++++. ..+...
T Consensus 292 ~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 292 STVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 6 45555677899999988764 444443
No 144
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=32.36 E-value=25 Score=19.21 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=18.6
Q ss_pred ccccceEEEeeCCceEEEcccc
Q 038747 106 GPYDGIFCLCDDSLIFLWNPAT 127 (401)
Q Consensus 106 ~s~~GLl~~~~~~~~~V~NP~T 127 (401)
++|.||-|-.....+-||-|-|
T Consensus 15 dcceglecwkrrrsfevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKRRRSFEVCVPKT 36 (37)
T ss_dssp CBCTTEEEECCSSSCCEEEECC
T ss_pred chhhhHHHHHhccceeeecCCC
Confidence 6899999998888888887765
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=32.30 E-value=2.3e+02 Score=24.54 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=36.1
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcE
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEV 334 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 334 (401)
.....+.||-++.........+.....-..-+.+.+++.++.. ..++.+..||+++++.
T Consensus 55 s~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 55 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 114 (321)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE
Confidence 4567799999887544444444332222223455556666555 4577888999888764
No 146
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=32.22 E-value=2.4e+02 Score=24.20 Aligned_cols=56 Identities=9% Similarity=0.223 Sum_probs=35.9
Q ss_pred CCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEeeCC----EEEEE-eeCCeEEEEECCC
Q 038747 276 KSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIWKNN----AVLME-SDNGTLLLYDLIV 331 (401)
Q Consensus 276 ~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~~~~----~il~~-~~~~~l~~yd~~t 331 (401)
.....+.||-++. ..|.....+........-+++.+++ .++.. ..++.+..||+++
T Consensus 186 s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 186 GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4567899999976 6787766554332223335555543 44444 5677899999876
No 147
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=31.60 E-value=2.8e+02 Score=24.65 Aligned_cols=187 Identities=9% Similarity=-0.025 Sum_probs=94.3
Q ss_pred cceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEE
Q 038747 109 DGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYT 188 (401)
Q Consensus 109 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (401)
.+.|++.....+...++.+.+...+-... ....++.+|+..+. |.... . ....+..++
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~~----------~~~~~l~~d~~~~~--ly~~D---~-------~~~~I~r~~ 101 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNNL----------ENAIALDFHHRREL--VFWSD---V-------TLDRILRAN 101 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECSC----------SCEEEEEEETTTTE--EEEEE---T-------TTTEEEEEE
T ss_pred CceeEeecccceEEEeCCCCeeEEeecCC----------CceEEEEEeccccE--EEEEe---c-------cCCceEEEe
Confidence 56667676667777777665544332211 23567888876552 22221 0 133566666
Q ss_pred cCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE
Q 038747 189 STTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF 265 (401)
Q Consensus 189 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~ 265 (401)
..++.-+.+... .+ ....++.+ +|.+||..... ..|..+|+....-..+. ...... ...+.+-
T Consensus 102 ~~g~~~~~~~~~--~~-----~~p~glavd~~~g~ly~~d~~~-----~~I~~~~~dG~~~~~l~-~~~l~~-P~~iavd 167 (349)
T 3v64_C 102 LNGSNVEEVVST--GL-----ESPGGLAVDWVHDKLYWTDSGT-----SRIEVANLDGAHRKVLL-WQSLEK-PRAIALH 167 (349)
T ss_dssp TTSCSCEEEECS--SC-----SCCCEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEE-CTTCSC-EEEEEEE
T ss_pred cCCCCceEEEeC--CC-----CCccEEEEecCCCeEEEEcCCC-----CeEEEEcCCCCceEEEE-eCCCCC-cceEEEe
Confidence 665543332111 01 11134443 68999986543 48999999766433332 111111 1114443
Q ss_pred --cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCCCcccc--eEEee-CCEEEEEe-eCCeEEEEECCCCcEEEE
Q 038747 266 --NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSP--RGIWK-NNAVLMES-DNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 266 --~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p--~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~v 337 (401)
+|.|.+.. ... .-.|++.+- +.-.+ .+- ...+..| +++.. ++.|++.. ..+.+..+|+.....+.+
T Consensus 168 p~~g~ly~td--~~~-~~~I~r~~~dG~~~~--~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 168 PMEGTIYWTD--WGN-TPRIEASSMDGSGRR--IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTTTEEEEEE--CSS-SCEEEEEETTSCSCE--ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCcCeEEEec--cCC-CCEEEEEeCCCCCcE--EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 56665443 222 234455443 21111 111 1223445 55553 67787764 356799999887655544
No 148
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=31.34 E-value=1.6e+02 Score=26.72 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=25.8
Q ss_pred cceEEe--e-CCEEEEEeeCCeEEEEECCCCcEEEE
Q 038747 305 SPRGIW--K-NNAVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 305 ~p~~~~--~-~~~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
.|+++. + -|.|++.++.|.++.||++|++.-..
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 455554 2 67889999999999999999986444
No 149
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=31.22 E-value=2.7e+02 Score=24.44 Aligned_cols=176 Identities=10% Similarity=0.013 Sum_probs=88.4
Q ss_pred eCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCCcc
Q 038747 116 DDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDSWR 195 (401)
Q Consensus 116 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~ 195 (401)
.+..+.+||+.|++....-... ....++.+++..+ + ++... . ....+.+|+..++.-.
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~----------~~v~~~~~spdg~-~-l~~~~----~------~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAG----------SSPQGVAVSPDGK-Q-VYVTN----M------ASSTLSVIDTTSNTVA 109 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTSS-E-EEEEE----T------TTTEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCeEEEEEECC----------CCccceEECCCCC-E-EEEEE----C------CCCEEEEEECCCCeEE
Confidence 3568999999988765432211 1234556666433 2 22221 1 1346888988876432
Q ss_pred ccCCCCcccceeeeCCCceeEE--Cce-EEEEEeecCCCCccEEEEEEcCCceEeEe-cCCCCCCCCCceeEE-EcCe-E
Q 038747 196 VSKGNVEWIPYDFKSHFKSTNL--NGV-FYWLVSRDDGDHSNIMLSFHISDEEFREI-ERPRIPYSSHESLGL-FNNS-V 269 (401)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~Il~fD~~~e~~~~i-~lP~~~~~~~~~l~~-~~g~-L 269 (401)
..-.. .. ...++.+ +|. +|...... ..|..+|+.+.+.... ...... ..+.. -+|+ |
T Consensus 110 ~~~~~--~~------~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~dg~~l 172 (391)
T 1l0q_A 110 GTVKT--GK------SPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVGRSP----KGIAVTPDGTKV 172 (391)
T ss_dssp EEEEC--SS------SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECCSSE----EEEEECTTSSEE
T ss_pred EEEeC--CC------CcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecCCCc----ceEEECCCCCEE
Confidence 21110 00 0112222 454 33333222 4899999987765433 222111 11222 2343 3
Q ss_pred EEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEE-Ee---eCCeEEEEECCCCcEE
Q 038747 270 SLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLM-ES---DNGTLLLYDLIVEEVR 335 (401)
Q Consensus 270 ~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~-~~---~~~~l~~yd~~t~~~~ 335 (401)
.+.. .....+.+|-+....-. ..+.... ...-+++.++|..++ .. .++.+..||+++++..
T Consensus 173 ~~~~--~~~~~v~~~d~~~~~~~--~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 173 YVAN--FDSMSISVIDTVTNSVI--DTVKVEA-APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEEE--TTTTEEEEEETTTTEEE--EEEECSS-EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred EEEe--CCCCEEEEEECCCCeEE--EEEecCC-CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 3333 45567888877663222 2222211 223356666665544 44 4678999999887653
No 150
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=30.84 E-value=2.9e+02 Score=24.64 Aligned_cols=192 Identities=11% Similarity=0.111 Sum_probs=88.4
Q ss_pred cccceEEEe--eCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceE
Q 038747 107 PYDGIFCLC--DDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLV 184 (401)
Q Consensus 107 s~~GLl~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (401)
+.+|-.++. .+..+.|||..+++....-... . .....+.+.|... + ++... ..-.+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-------~--~~v~~~~~~p~~~-~-l~s~s-----------~d~~v 189 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-------E--QDIYSLDYFPSGD-K-LVSGS-----------GDRTV 189 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------S--SCEEEEEECTTSS-E-EEEEE-----------TTSEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-------C--CCEEEEEEcCCCC-E-EEEec-----------CCCcE
Confidence 445544333 3568999999887754321111 1 1234556665432 2 22221 13468
Q ss_pred EEEEcCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeE-ecCCCCC-CCCC
Q 038747 185 AIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFRE-IERPRIP-YSSH 259 (401)
Q Consensus 185 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~-i~lP~~~-~~~~ 259 (401)
.+|+.+++.-...-.. ... -..+.+ +|.+......+ ..|..+|+.+..... +..+... ....
T Consensus 190 ~iwd~~~~~~~~~~~~--~~~------v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSI--EDG------VTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp EEEETTTTEEEEEEEC--SSC------EEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCS
T ss_pred EEEECCCCeeEEEEEc--CCC------cEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCC
Confidence 8888877643211100 000 011111 34433333222 368888987765432 2222111 1111
Q ss_pred ce---eEE-EcCeEEEEeecCCCCeEEEEEEcCCc----------EEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeE
Q 038747 260 ES---LGL-FNNSVSLLHFDKSSHYIDIWLMSDMN----------WIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTL 324 (401)
Q Consensus 260 ~~---l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~----------W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l 324 (401)
.. +.. -+|.+.+.. .....+.||-+.... ......+........-+++.+++..++. ..++.+
T Consensus 257 ~~v~~v~~~~~g~~l~s~--s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 257 DSVYSVVFTRDGQSVVSG--SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp SCEEEEEECTTSSEEEEE--ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCEEEEEECCCCCEEEEE--eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 11 222 134443333 466789999887510 1111111111112233556666766665 557789
Q ss_pred EEEECCCCcEE
Q 038747 325 LLYDLIVEEVR 335 (401)
Q Consensus 325 ~~yd~~t~~~~ 335 (401)
..||.++++..
T Consensus 335 ~iwd~~~~~~~ 345 (393)
T 1erj_A 335 LFWDKKSGNPL 345 (393)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCeEE
Confidence 99999988753
No 151
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=30.73 E-value=2.6e+02 Score=24.00 Aligned_cols=58 Identities=9% Similarity=-0.094 Sum_probs=36.3
Q ss_pred CCCCeEEEEEEcC-----------------CcEEEEEEEcCCCCcccceEEeeCCEEEE-E-eeCCeEEEEECCCCc
Q 038747 276 KSSHYIDIWLMSD-----------------MNWIQQFAIGPFLGVMSPRGIWKNNAVLM-E-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 276 ~~~~~l~IW~l~~-----------------~~W~~~~~i~~~~~~~~p~~~~~~~~il~-~-~~~~~l~~yd~~t~~ 333 (401)
.....+.||-++. +.+.....+........-+++.+++..++ . ..++.+..||+.+.+
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 4567899999975 14455555554332333466677776655 3 557789999987643
No 152
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=30.70 E-value=2.4e+02 Score=23.76 Aligned_cols=58 Identities=12% Similarity=0.141 Sum_probs=38.3
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEee--CCEEEEE-eeCCeEEEEECCCCc
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWK--NNAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~--~~~il~~-~~~~~l~~yd~~t~~ 333 (401)
.....+.||-++. ..+.....+........-+++.+ ++.+++. ..++.+..||+++++
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 30 SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 3567899999986 66777666654332333456655 3655554 567789999998763
No 153
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=30.59 E-value=1.9e+02 Score=24.77 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=39.2
Q ss_pred CCCCeEEEEEEcC-CcEEEEEEEcCCCCcccceEEeeCCE-EEE-EeeCCeEEEEEC-CCCcEEEEee
Q 038747 276 KSSHYIDIWLMSD-MNWIQQFAIGPFLGVMSPRGIWKNNA-VLM-ESDNGTLLLYDL-IVEEVRDLGR 339 (401)
Q Consensus 276 ~~~~~l~IW~l~~-~~W~~~~~i~~~~~~~~p~~~~~~~~-il~-~~~~~~l~~yd~-~t~~~~~v~~ 339 (401)
.....+.||-++. ........+........-+++.+++. .++ ...++.+..||+ ++++...+..
T Consensus 30 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 30 SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 3567899999987 32222222222222233456667777 544 456788999999 9888766654
No 154
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.57 E-value=1.2e+02 Score=27.33 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=24.2
Q ss_pred eCCEEEEEeeCCeEEEEECCCCcEEEEeec
Q 038747 311 KNNAVLMESDNGTLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 311 ~~~~il~~~~~~~l~~yd~~t~~~~~v~~~ 340 (401)
.+|.++.-..++++++.|++|++..+-...
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 466777778888999999999998876654
No 155
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=30.52 E-value=34 Score=30.52 Aligned_cols=58 Identities=5% Similarity=0.153 Sum_probs=34.7
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCc
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEE 333 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~ 333 (401)
.....+.||-++...|.....+........-+++.+++..++. ..++.+..||+++++
T Consensus 30 ~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 30 TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 4567899999988777766655433322334566677766555 557789999998876
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=30.37 E-value=2.7e+02 Score=24.14 Aligned_cols=190 Identities=8% Similarity=0.050 Sum_probs=90.4
Q ss_pred ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCCCC-c-cc
Q 038747 119 LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTTDS-W-RV 196 (401)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t~~-W-~~ 196 (401)
.++++|+.|++....-.... .....++.+|+... ++.... ....+.+|+..+.. . ..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~--------~~~p~gia~d~~g~---l~v~d~----------~~~~v~~~~~~g~~~~~~~ 128 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL--------FYLPHGLSIDTDGN---YWVTDV----------ALHQVFKLDPHSKEGPLLI 128 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT--------CSSEEEEEECTTSC---EEEEET----------TTTEEEEECTTCSSCCSEE
T ss_pred cEEEEECCCCeEEeccCCCc--------cCCceEEEECCCCC---EEEEEC----------CCCEEEEEeCCCCeEEEEE
Confidence 58999999888653221110 12345677776443 222211 13467777765431 1 11
Q ss_pred cCCCC-cccceeeeCCCceeEE---CceEEEEEe-ecCCCCccEEEEEEcCCceEeEecCCCCC------CCCCce-eEE
Q 038747 197 SKGNV-EWIPYDFKSHFKSTNL---NGVFYWLVS-RDDGDHSNIMLSFHISDEEFREIERPRIP------YSSHES-LGL 264 (401)
Q Consensus 197 ~~~~~-~~~~~~~~~~~~~v~~---~G~lywl~~-~~~~~~~~~Il~fD~~~e~~~~i~lP~~~------~~~~~~-l~~ 264 (401)
+.... ............++.+ +|.+|.... .. ..|..||........+..+... ...... +..
T Consensus 129 ~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~-----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~ 203 (329)
T 3fvz_A 129 LGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN-----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLAL 203 (329)
T ss_dssp ESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC-----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEE
T ss_pred ecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC-----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEE
Confidence 11000 0000000011234444 588887763 22 4899999766655555322211 001111 444
Q ss_pred E-c-CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEe--------eCCeEEEEECCCCcE
Q 038747 265 F-N-NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMES--------DNGTLLLYDLIVEEV 334 (401)
Q Consensus 265 ~-~-g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~--------~~~~l~~yd~~t~~~ 334 (401)
. + |.|.+.. .....+.+|-.+.+.................+++.+ +.++... ....+..||+.++++
T Consensus 204 d~~~g~l~v~d--~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 204 VPHLDQLCVAD--RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp ETTTTEEEEEE--TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred ECCCCEEEEEE--CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 3 3 6776655 667788888877544443332111111111233333 3333322 234688999888876
Q ss_pred EEE
Q 038747 335 RDL 337 (401)
Q Consensus 335 ~~v 337 (401)
...
T Consensus 281 ~~~ 283 (329)
T 3fvz_A 281 IDV 283 (329)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 157
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=30.35 E-value=2.1e+02 Score=24.64 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=37.2
Q ss_pred CCCCeEEEEEEcC--CcE-EEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcE
Q 038747 276 KSSHYIDIWLMSD--MNW-IQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEV 334 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W-~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 334 (401)
.....+.+|-+.. ... ..+..+........-+++.+++..++. ..++.+..||+++++.
T Consensus 37 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 4667899999875 222 223333332223334566677777665 4577899999998874
No 158
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=29.97 E-value=2.8e+02 Score=24.26 Aligned_cols=109 Identities=9% Similarity=-0.062 Sum_probs=57.4
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEE
Q 038747 217 LNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQ 293 (401)
Q Consensus 217 ~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~ 293 (401)
.+|.+||..... ..|..+|+....-..+. ..... ....+.+- +|.|.+.. .. ..-.|++.+- ++-.+
T Consensus 89 ~~g~ly~~d~~~-----~~I~~~~~dG~~~~~l~-~~~~~-~P~giavdp~~g~ly~td--~~-~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 89 LGEKLYWTDSET-----NRIEVSNLDGSLRKVLF-WQELD-QPRAIALDPSSGFMYWTD--WG-EVPKIERAGMDGSSRF 158 (318)
T ss_dssp TTTEEEEEETTT-----TEEEEEETTSCSCEEEE-CSSCS-SEEEEEEEGGGTEEEEEE--CS-SSCEEEEEETTSCSCE
T ss_pred CCCeEEEEECCC-----CEEEEEECCCCcEEEEE-eCCCC-CccEEEEeCCCCEEEEEe--cC-CCCEEEEEEcCCCCeE
Confidence 368999986443 48999999765433331 11111 11114443 46665443 21 1234565543 32222
Q ss_pred EEEEcCCCCcccc--eEEee-CCEEEEEe-eCCeEEEEECCCCcEEEEe
Q 038747 294 QFAIGPFLGVMSP--RGIWK-NNAVLMES-DNGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 294 ~~~i~~~~~~~~p--~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~v~ 338 (401)
.. +. ..+..| +++.. ++.|++.. ..+.+..+|+..+..+.+.
T Consensus 159 ~~-~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 159 II-IN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp EE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EE-EE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 21 11 123344 55654 67787764 4567999998866655553
No 159
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=29.75 E-value=2.8e+02 Score=24.07 Aligned_cols=59 Identities=17% Similarity=0.070 Sum_probs=37.3
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEE
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~ 335 (401)
.....+.||-++.+.-.+.... .......-+++.++|.++.. ..++.+..||+++++..
T Consensus 146 s~dg~i~~wd~~~~~~~~~~~~-~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 146 DNRGTIGFQSYEDDSQYIVHSA-KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ETTCCEEEEESSSSCEEEEECC-CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred eCCCcEEEEECCCCcEEEEEec-CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 3566799999887332222211 11112334677778888776 56788999999988753
No 160
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=29.52 E-value=2.8e+02 Score=24.01 Aligned_cols=63 Identities=10% Similarity=0.054 Sum_probs=38.7
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEEEe
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v~ 338 (401)
.....+.||-+.. ..+.....+........-+.+.+++.+++. ..++.+..||..++..+.+.
T Consensus 126 s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA 191 (330)
T ss_dssp ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE
Confidence 3556788998854 456655555433322334566667776665 45677888998777554443
No 161
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=28.63 E-value=3.5e+02 Score=24.93 Aligned_cols=112 Identities=7% Similarity=0.092 Sum_probs=60.8
Q ss_pred ceeEEC-----ceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeE-EEcCeEEEEeecCCC-CeEEEEE
Q 038747 213 KSTNLN-----GVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLG-LFNNSVSLLHFDKSS-HYIDIWL 285 (401)
Q Consensus 213 ~~v~~~-----G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~~~~~~~~~-~~l~IW~ 285 (401)
.++.++ |.|||.... ..|..+|+.+.....+..+. .. ...+. ..+|.|.+....... ..-.+++
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~g~v~~~~~~~--~~-P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR------DAFRHVDFVNQYVDIKTTNI--GQ-CADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT------SCEEEEETTTTEEEEECCCC--SC-EEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred ceEEEccccCCCEEEEEeCC------CCEEEEECCCCEEEEeecCC--CC-ccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 567776 899987543 38999999888877663211 10 01122 235565544421111 2223333
Q ss_pred EcCCcEEEEEEEcCCCCcccceEEee-CCEEEEEe-eCCeEEEEECCCCcE
Q 038747 286 MSDMNWIQQFAIGPFLGVMSPRGIWK-NNAVLMES-DNGTLLLYDLIVEEV 334 (401)
Q Consensus 286 l~~~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~~-~~~~l~~yd~~t~~~ 334 (401)
..+..|.....+.... ...-+++.+ +|.|++.. ..+.+..||+.++++
T Consensus 213 ~~~~~~~~~~~~~~~~-~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRASGFTERLSLCNAR-GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CGGGTTCCEEEEEECS-SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ECCCCeeccccccccC-CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3333333212221111 122367777 78888765 456799999998877
No 162
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.20 E-value=50 Score=22.34 Aligned_cols=21 Identities=5% Similarity=0.126 Sum_probs=16.7
Q ss_pred EEEEEeeCCeEEEEECCCCcE
Q 038747 314 AVLMESDNGTLLLYDLIVEEV 334 (401)
Q Consensus 314 ~il~~~~~~~l~~yd~~t~~~ 334 (401)
-.+..+.++++++||..|++-
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp CEEEEESSSCEEEEETTTTEE
T ss_pred cEEEECCCCCEEEecCcccce
Confidence 345567889999999999873
No 163
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=28.12 E-value=3.1e+02 Score=24.20 Aligned_cols=119 Identities=8% Similarity=-0.077 Sum_probs=56.8
Q ss_pred EEEEEEcCCceEeEecCCCCCCCCCcee-EEEcCeEEEEeecCCCC--eEEEEEEcCCcEEE--EEEEcCCCCcccceEE
Q 038747 235 IMLSFHISDEEFREIERPRIPYSSHESL-GLFNNSVSLLHFDKSSH--YIDIWLMSDMNWIQ--QFAIGPFLGVMSPRGI 309 (401)
Q Consensus 235 ~Il~fD~~~e~~~~i~lP~~~~~~~~~l-~~~~g~L~~~~~~~~~~--~l~IW~l~~~~W~~--~~~i~~~~~~~~p~~~ 309 (401)
.+..++..+...............-..+ ..-+|...+........ .+.+|-+....+.. ...+.....-..-+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 5667777666544332221111000012 22355544333222333 45555555533322 2333322212234677
Q ss_pred eeCCEEEEE-eeCCeEEEEECCCCcEEEEeeccCCCCCceEEEEEEec
Q 038747 310 WKNNAVLME-SDNGTLLLYDLIVEEVRDLGRFTRGTLGTAILTYCYKE 356 (401)
Q Consensus 310 ~~~~~il~~-~~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~~~~y~e 356 (401)
.++|.++.. ..++.+..||.++++...--.. +... ......|.|
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~--gH~~-~V~~v~fSp 322 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMSKIFKQ--AHSF-AITEVTISP 322 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEETT--SSSS-CEEEEEECT
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEEEEecC--cccC-CEEEEEECC
Confidence 788887765 5567899999998875432222 3333 345555654
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=27.33 E-value=4e+02 Score=25.20 Aligned_cols=185 Identities=8% Similarity=-0.001 Sum_probs=90.9
Q ss_pred ceEEEee-CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEE
Q 038747 110 GIFCLCD-DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYT 188 (401)
Q Consensus 110 GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (401)
++++... .....+||..|++...|...+. ..+.++|. +.+- +...... . ....+.+++
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~------------~~~~~spD-G~~l-a~~~~~~-~------~~~~i~~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG------------FGFVSDIR-GDLI-AGLGFFG-G------GRVSLFTSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS------------CEEEEEEE-TTEE-EEEEEEE-T------TEEEEEEEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC------------ceEEECCC-CCEE-EEEEEcC-C------CCeEEEEEc
Confidence 4555543 3456699999988776653221 23334443 2332 2222111 1 124577888
Q ss_pred cCCCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCcee------
Q 038747 189 STTDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESL------ 262 (401)
Q Consensus 189 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l------ 262 (401)
..++.++.+.... ... ......=||...+..... ....|..+|+.+.+... +...........
T Consensus 182 ~~~g~~~~l~~~~---~~~---~~~~~SpDG~~l~~~~~~---~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 182 LSSGGLRVFDSGE---GSF---SSASISPGMKVTAGLETA---REARLVTVDPRDGSVED--LELPSKDFSSYRPTAITW 250 (582)
T ss_dssp TTTCCCEEECCSS---CEE---EEEEECTTSCEEEEEECS---SCEEEEEECTTTCCEEE--CCCSCSHHHHHCCSEEEE
T ss_pred CCCCCceEeecCC---Ccc---ccceECCCCCEEEEccCC---CeeEEEEEcCCCCcEEE--ccCCCcChhhhhhccccc
Confidence 8888887664321 100 001122256544433222 22479999998887762 222111000001
Q ss_pred --EEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCCEEEEEe-eC---CeEEEEECCCCcEEE
Q 038747 263 --GLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNNAVLMES-DN---GTLLLYDLIVEEVRD 336 (401)
Q Consensus 263 --~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~-~~---~~l~~yd~~t~~~~~ 336 (401)
..-+|.+.+.. .......||.+ . ...+ .+. .....+.+. +|.+++.. .. ..++.+|.++ +.+.
T Consensus 251 ~~~spdg~~~~~~--~~~g~~~l~~~-g-~~~~----~~~-~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~ 319 (582)
T 3o4h_A 251 LGYLPDGRLAVVA--RREGRSAVFID-G-ERVE----APQ-GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLE 319 (582)
T ss_dssp EEECTTSCEEEEE--EETTEEEEEET-T-EEEC----CCS-SEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEEC
T ss_pred eeEcCCCcEEEEE--EcCCcEEEEEE-C-Ceec----cCC-CceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEE
Confidence 23355554333 34457889988 2 2111 121 122335666 78776653 22 4588888775 4444
Q ss_pred E
Q 038747 337 L 337 (401)
Q Consensus 337 v 337 (401)
+
T Consensus 320 l 320 (582)
T 3o4h_A 320 G 320 (582)
T ss_dssp C
T ss_pred E
Confidence 4
No 165
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=27.20 E-value=3.1e+02 Score=23.79 Aligned_cols=60 Identities=15% Similarity=0.151 Sum_probs=37.9
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEEEEEeeCCeEEEEECCCCcEE
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAVLMESDNGTLLLYDLIVEEVR 335 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 335 (401)
.....+.||-++. ........+........-+.+.+++.++....++.+..||+++++..
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred eCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEE
Confidence 3557889998876 33333333333222333355566778776677888999999887653
No 166
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=26.60 E-value=3e+02 Score=23.38 Aligned_cols=104 Identities=8% Similarity=0.096 Sum_probs=58.6
Q ss_pred cEEEEEEcCC--ceEe---Eec-CCCCCCCCC-c-eeEEE-cCe-EEEEeecCCCCeEEEEEEcC--CcEEEEEEEcCCC
Q 038747 234 NIMLSFHISD--EEFR---EIE-RPRIPYSSH-E-SLGLF-NNS-VSLLHFDKSSHYIDIWLMSD--MNWIQQFAIGPFL 301 (401)
Q Consensus 234 ~~Il~fD~~~--e~~~---~i~-lP~~~~~~~-~-~l~~~-~g~-L~~~~~~~~~~~l~IW~l~~--~~W~~~~~i~~~~ 301 (401)
..|..+|+.. .++. .+. +|....... . .+... +|+ |.+.. .....+.+|-++. +.+.....+....
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~--~~~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD--RTASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE--TTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe--cCCCEEEEEEEcCCCCceEEeeeecCCC
Confidence 4788888843 4332 232 343211111 1 12222 344 43333 4667899999984 5677766665322
Q ss_pred CcccceEEeeCCEEEEE-e-eCCeEEEE--ECCCCcEEEEeec
Q 038747 302 GVMSPRGIWKNNAVLME-S-DNGTLLLY--DLIVEEVRDLGRF 340 (401)
Q Consensus 302 ~~~~p~~~~~~~~il~~-~-~~~~l~~y--d~~t~~~~~v~~~ 340 (401)
....+++.++|..++. . .++.+..| |.++++++.+...
T Consensus 278 -~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 278 -QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp -SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred -ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 2344677777775444 4 35677777 7778888777544
No 167
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=25.96 E-value=3e+02 Score=23.26 Aligned_cols=57 Identities=9% Similarity=0.180 Sum_probs=38.3
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeC---CEEEEE-eeCCeEEEEECCCC
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKN---NAVLME-SDNGTLLLYDLIVE 332 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~---~~il~~-~~~~~l~~yd~~t~ 332 (401)
.....+.||-++. ..|.....+........-+++.++ +.++.. ..++.+..||+++.
T Consensus 177 s~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 4567899999877 557777766543333444666665 355555 45778999998764
No 168
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=25.67 E-value=3e+02 Score=23.22 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=39.6
Q ss_pred CeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeC--CEEEEE-eeCCeEEEEECCCC
Q 038747 267 NSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKN--NAVLME-SDNGTLLLYDLIVE 332 (401)
Q Consensus 267 g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~--~~il~~-~~~~~l~~yd~~t~ 332 (401)
|.+.+.. .....+.||-++.+.|.....+........-+++.++ +.+++. ..++.+..||++++
T Consensus 67 g~~l~s~--s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASC--SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEE--ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEE--cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 4443333 4667899999988767665555432222333555553 555444 56778999998765
No 169
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=25.05 E-value=3.5e+02 Score=23.73 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=33.8
Q ss_pred CCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCC-EEEEE-eeCCeEEEEECCCCcEEE
Q 038747 276 KSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNN-AVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 276 ~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~-~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
.....+.||-+.... ....+.....-..-+++.+++ .++.. ..++.+..||+++++...
T Consensus 246 ~~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 246 DETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp ESSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred ecccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 355678999876621 112222222122335666654 55554 456789999999887644
No 170
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=24.65 E-value=3.5e+02 Score=23.64 Aligned_cols=89 Identities=10% Similarity=0.114 Sum_probs=43.8
Q ss_pred EEEEEEcCCceEeEe-cCCCCCCCCCceeE-EEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeC
Q 038747 235 IMLSFHISDEEFREI-ERPRIPYSSHESLG-LFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKN 312 (401)
Q Consensus 235 ~Il~fD~~~e~~~~i-~lP~~~~~~~~~l~-~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~ 312 (401)
.|-.+|+.+..-..+ ......... ..+. ..+|.+.+.. .....+.||-+..+. .+..+........-+++.++
T Consensus 263 ~v~lwd~~~~~~~~~~~~~~~~~~~-~~~~~s~~g~~l~~g--~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 263 TCRLYDLRADREVAIYSKESIIFGA-SSVDFSLSGRLLFAG--YNDYTINVWDVLKGS--RVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCE-EEEEECTTSSEEEEE--ETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTT
T ss_pred eEEEEECCCCcEEEEEcCCCcccce-eEEEEeCCCCEEEEE--ECCCcEEEEECCCCc--eEEEEECCCCcEEEEEECCC
Confidence 688889877643322 211111000 0111 1245544333 356689999876522 22333322222334666777
Q ss_pred CEEEEE-eeCCeEEEEE
Q 038747 313 NAVLME-SDNGTLLLYD 328 (401)
Q Consensus 313 ~~il~~-~~~~~l~~yd 328 (401)
|..+.. ..++.+..||
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 776665 4456666664
No 171
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=24.48 E-value=5.2e+02 Score=25.50 Aligned_cols=92 Identities=7% Similarity=-0.044 Sum_probs=42.4
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEE-EcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGL-FNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK 311 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~ 311 (401)
..|..+|+.+.+... +..... .. ..+.. -+|.+.+.. .....+.||-+... .....+.........+++.+
T Consensus 208 g~i~~~d~~~~~~~~~~~~~~~--~v-~~~~~~~~~~~l~~~--~~dg~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 208 LTIKIWDYQTKSCVATLEGHMS--NV-SFAVFHPTLPIIISG--SEDGTLKIWNSSTY--KVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSS--CE-EEEEECSSSSEEEEE--ETTSCEEEEETTTC--SEEEEECCSSSSEEEEEECT
T ss_pred CEEEEEECCCCcEEEEEcCCCC--CE-EEEEEcCCCCEEEEE--eCCCeEEEEECCCC--cEEEEeecCCCcEEEEEEcc
Confidence 378889987765322 221110 00 01221 234433333 34567889976652 23333332221222344444
Q ss_pred CCE--EEEEeeCCeEEEEECCCC
Q 038747 312 NNA--VLMESDNGTLLLYDLIVE 332 (401)
Q Consensus 312 ~~~--il~~~~~~~l~~yd~~t~ 332 (401)
+|. ++....++.+..+++.++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 281 TGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp TCGGGEEEEEETTEEEEEECSCC
T ss_pred CCCceEEEEEeCCCEEEEEcCCC
Confidence 443 344455556666665543
No 172
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=24.23 E-value=4e+02 Score=24.08 Aligned_cols=94 Identities=10% Similarity=0.192 Sum_probs=54.7
Q ss_pred EEEEEEcCCceEeE-ecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEeeCC
Q 038747 235 IMLSFHISDEEFRE-IERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWKNN 313 (401)
Q Consensus 235 ~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~~~ 313 (401)
.|..+|+.+++... +.... .........+...+.. .....+.||-+.... +...... ......+++..++
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~s~--s~dg~v~vwd~~~~~--~~~~~~~-~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHT----ALVGLLRLSDKFLVSA--AADGSIRGWDANDYS--RKFSYHH-TNLSAITTFYVSD 403 (464)
T ss_dssp CEEEEETTTTEEEEEECCCS----SCEEEEEECSSEEEEE--ETTSEEEEEETTTCC--EEEEEEC-TTCCCEEEEEECS
T ss_pred cEEEEECCCCcEEEEEeCCC----CcEEEEEEcCCEEEEE--eCCCcEEEEECCCCc--eeeeecC-CCCccEEEEEeCC
Confidence 67778887655332 22111 1111233345443333 456789999888732 2222221 1123345677788
Q ss_pred EEEEEeeCCeEEEEECCCCcEEEE
Q 038747 314 AVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 314 ~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
.+++...++.+..||+++++....
T Consensus 404 ~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 404 NILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp SEEEEEETTEEEEEETTTCCEEES
T ss_pred CEEEEecCCeEEEEECCCCcEEeh
Confidence 888887788999999999987653
No 173
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=24.18 E-value=3.6e+02 Score=23.61 Aligned_cols=97 Identities=13% Similarity=0.143 Sum_probs=51.2
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK 311 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~ 311 (401)
..|..+|+.+.+... +.... ... ..+... +|.+.+.. .....+.||-+....-.. .+........-+.+.+
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~--~~i-~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH--GPI-SVLEFNDTNKLLLSA--SDDGTLRIWHGGNGNSQN--CFYGHSQSIVSASWVG 299 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS--SCE-EEEEEETTTTEEEEE--ETTSCEEEECSSSBSCSE--EECCCSSCEEEEEEET
T ss_pred CeEEEEEcCCCceeeeeccCC--Cce-EEEEECCCCCEEEEE--cCCCEEEEEECCCCccce--EecCCCccEEEEEECC
Confidence 378899988764322 22111 000 112222 34433333 355678999877622222 2222222233456666
Q ss_pred CCEEEEEeeCCeEEEEECCCCcEEEE
Q 038747 312 NNAVLMESDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 312 ~~~il~~~~~~~l~~yd~~t~~~~~v 337 (401)
++.++....++.+..||+++++....
T Consensus 300 ~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 300 DDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp TTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 77445556788999999988775443
No 174
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=23.55 E-value=1.1e+02 Score=23.61 Aligned_cols=77 Identities=16% Similarity=0.208 Sum_probs=49.3
Q ss_pred cceEEEeeCC----ceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceE
Q 038747 109 DGIFCLCDDS----LIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLV 184 (401)
Q Consensus 109 ~GLl~~~~~~----~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (401)
+=+||+++.. .+|.+||.+.+...|-.... ..........-+-||.....|+.+--.. -...+
T Consensus 55 hFlILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP---~~i~~~mV~~~~KYdSg~K~F~~i~sk~----------~s~tv 121 (141)
T 1ugj_A 55 HFLILFRDSSCQFRALYTLSGETEELSRLAGYGP---RTVTPAMVEGIYKYNSDRKRFTQIPAKT----------MSMSV 121 (141)
T ss_dssp CEEEEESSSSCSEEEEEEECTTSSCEEEEESSSC---SEECTTTEEEEEEEETTTTEEEECSSSS----------CCTTC
T ss_pred eEEEEEecCCCceEEEEEEeCCCceEEEEECCCc---CcccHHHHHHHhccCCCCceecccCccc----------cceeE
Confidence 4456766543 78999999988776644321 1122335666788999999998765311 13456
Q ss_pred EEEEcCCCCccccC
Q 038747 185 AIYTSTTDSWRVSK 198 (401)
Q Consensus 185 ~vyss~t~~W~~~~ 198 (401)
.-++....-|....
T Consensus 122 DAvtl~~~~w~~k~ 135 (141)
T 1ugj_A 122 DAFTIQGHLWQSKK 135 (141)
T ss_dssp SEEEECSTTTSCSC
T ss_pred EEEEEhhHhhcCCC
Confidence 66777788886543
No 175
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=23.31 E-value=1.5e+02 Score=19.61 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=14.3
Q ss_pred eEEEEECCCCcEEEEee
Q 038747 323 TLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 323 ~l~~yd~~t~~~~~v~~ 339 (401)
+++.||.++++++.+.-
T Consensus 41 KIykyde~tNeI~LkKE 57 (72)
T 3kvp_A 41 KIYEYNESRNEVKLKKE 57 (72)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCCeEEEEEe
Confidence 79999999999877644
No 176
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=23.27 E-value=3.1e+02 Score=22.43 Aligned_cols=184 Identities=10% Similarity=-0.036 Sum_probs=89.3
Q ss_pred CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcCC-CCccc
Q 038747 118 SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTSTT-DSWRV 196 (401)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~t-~~W~~ 196 (401)
..+++||+.+++...+..... ....+.+.|... +-++ . . ...+.+++..+ +....
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~----------~v~~~~~spdg~-~l~~-~-~-----------~~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE----------LFEAPNWSPDGK-YLLL-N-S-----------EGLLYRLSLAGDPSPEK 77 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS----------CCEEEEECTTSS-EEEE-E-E-----------TTEEEEEESSSCCSCEE
T ss_pred eeEEEEeCCCCceeeeccCCc----------ceEeeEECCCCC-EEEE-E-c-----------CCeEEEEeCCCCCCceE
Confidence 478999999988776544321 233455555433 3222 1 1 23688899888 76654
Q ss_pred cCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCeEEEEeec
Q 038747 197 SKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNSVSLLHFD 275 (401)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~~~~~~ 275 (401)
+......... ......-+|......... ......|..+|+.+.....+...... ..+.. -+|+..++..
T Consensus 78 ~~~~~~~~~~----~~~~~spdg~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~spdg~~l~~~~- 147 (297)
T 2ojh_A 78 VDTGFATICN----NDHGISPDGALYAISDKV-EFGKSAIYLLPSTGGTPRLMTKNLPS----YWHGWSPDGKSFTYCG- 147 (297)
T ss_dssp CCCTTCCCBC----SCCEECTTSSEEEEEECT-TTSSCEEEEEETTCCCCEECCSSSSE----EEEEECTTSSEEEEEE-
T ss_pred eccccccccc----cceEECCCCCEEEEEEeC-CCCcceEEEEECCCCceEEeecCCCc----cceEECCCCCEEEEEE-
Confidence 4321100000 001122245433333211 11235888888877765554332211 11222 2454333221
Q ss_pred CCCCeEEEEEEcC--CcEEEEEEEcCCCCcccceEEeeCCEE-EEEee---CCeEEEEECCCCcEEEEe
Q 038747 276 KSSHYIDIWLMSD--MNWIQQFAIGPFLGVMSPRGIWKNNAV-LMESD---NGTLLLYDLIVEEVRDLG 338 (401)
Q Consensus 276 ~~~~~l~IW~l~~--~~W~~~~~i~~~~~~~~p~~~~~~~~i-l~~~~---~~~l~~yd~~t~~~~~v~ 338 (401)
.....+.||.++. .... .+.........+.+.++|.. ++... ...++.+++.+++.+.+.
T Consensus 148 ~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 148 IRDQVFDIYSMDIDSGVET---RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EETTEEEEEEEETTTCCEE---ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred CCCCceEEEEEECCCCcce---EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 2345689999865 3222 22222222233556667764 44432 345777777777776654
No 177
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=23.22 E-value=4.9e+02 Score=24.74 Aligned_cols=101 Identities=10% Similarity=0.065 Sum_probs=60.3
Q ss_pred cEEEEEEcCCceEeE-ecCCCCCCCCCce-eEEEc-CeEEEEeecCCCCeEEEEEEcC-----CcEEEEEEEcCCCCccc
Q 038747 234 NIMLSFHISDEEFRE-IERPRIPYSSHES-LGLFN-NSVSLLHFDKSSHYIDIWLMSD-----MNWIQQFAIGPFLGVMS 305 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~-i~lP~~~~~~~~~-l~~~~-g~L~~~~~~~~~~~l~IW~l~~-----~~W~~~~~i~~~~~~~~ 305 (401)
..|..+|+.+.+... ++.....+..... +..-+ |.+.+.. .....++.||-++. ..|..+.++.....-..
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~-~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~ 424 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS-HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL 424 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEE-BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC
T ss_pred CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEec-cCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCce
Confidence 478889998887544 3432111111111 21122 4443322 23567899998876 34998888874332233
Q ss_pred ceEEeeCCEEEEEee--------CCeEEEEECCCCcEE
Q 038747 306 PRGIWKNNAVLMESD--------NGTLLLYDLIVEEVR 335 (401)
Q Consensus 306 p~~~~~~~~il~~~~--------~~~l~~yd~~t~~~~ 335 (401)
.+.+++++..+.... ...+.+||.++.+..
T Consensus 425 ~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 425 FIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 467778887766643 457999999988753
No 178
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.21 E-value=4.2e+02 Score=24.02 Aligned_cols=200 Identities=9% Similarity=0.023 Sum_probs=96.6
Q ss_pred eeccccceEEEeeC--CceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCc
Q 038747 104 LLGPYDGIFCLCDD--SLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEH 181 (401)
Q Consensus 104 ~~~s~~GLl~~~~~--~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (401)
+.-..+|-|.+.+. ..+.++++.+++...+..... ... +.+++..+ .++... .. ..
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----------~~~-ia~~~~g~--~l~~~d---~~------~~ 193 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----------GGK-PAVTKDKQ--RVYSIG---WE------GT 193 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC----------BCB-CEECTTSS--EEEEEB---SS------TT
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC----------CCc-eeEecCCC--cEEEEe---cC------CC
Confidence 33345676666653 588999999888776543311 111 44555433 222221 00 11
Q ss_pred ceEEEEEcCCCC-ccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEec---CCCC
Q 038747 182 SLVAIYTSTTDS-WRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIE---RPRI 254 (401)
Q Consensus 182 ~~~~vyss~t~~-W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~---lP~~ 254 (401)
..+.+++..++. .+........ . . ....++.+ +|.+|+ +... ..|..+|+.+.....+. ....
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~~~--~-~-~~p~~iav~p~~g~lyv-~d~~-----~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLGST--F-S-GKIGAVALDETEEWLYF-VDSN-----KNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECCTT--S-C-SCCCBCEECTTSSEEEE-ECTT-----CEEEEEETTTCCEEEEEECCCCSC
T ss_pred ceEEEEEcCCCceeEEeeeccch--h-c-CCcEEEEEeCCCCeEEE-EECC-----CcEEEEECCCCCEEEEecccccCC
Confidence 256666665432 1122000000 0 0 11122333 689998 3222 38999999877665551 1111
Q ss_pred CCCCCc-eeEEE--cCeEEEEeecCCCCeEEEEEEcC-CcEEEEEEEcCCC----------Ccccc--eEEeeCCEEEEE
Q 038747 255 PYSSHE-SLGLF--NNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFAIGPFL----------GVMSP--RGIWKNNAVLME 318 (401)
Q Consensus 255 ~~~~~~-~l~~~--~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~i~~~~----------~~~~p--~~~~~~~~il~~ 318 (401)
...... .+... +|.|.+.. ..... |++++. +.-.....-.... .+..| +++.++|.|++.
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d--~~~~~--I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSD--QNLSS--VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEE--TTTTE--EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCCCccccEEEeCCCCEEEEEe--CCCCE--EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 111101 34443 46665544 34444 444443 3211111100000 12335 556668888777
Q ss_pred e--eCCeEEEEECCCCcEEEEee
Q 038747 319 S--DNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 319 ~--~~~~l~~yd~~t~~~~~v~~ 339 (401)
. ...++..+|+.++++..+.-
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEEeC
Confidence 5 46689999988888766644
No 179
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=23.13 E-value=3.9e+02 Score=23.60 Aligned_cols=193 Identities=10% Similarity=0.064 Sum_probs=94.5
Q ss_pred ccccceEEEee--CCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcce
Q 038747 106 GPYDGIFCLCD--DSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSL 183 (401)
Q Consensus 106 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (401)
+..+|.|...+ ...++.+++.++....+..... ....|+.+|+..+. ++... . ....
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~--ly~~d---~-------~~~~ 139 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDK--LYWTD---S-------GTSR 139 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTE--EEEEE---T-------TTTE
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCC---------CCccEEEEecCCCe--EEEEc---C-------CCCe
Confidence 34567777665 3477888887766544432221 12356777765542 22221 0 1346
Q ss_pred EEEEEcCCCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCc
Q 038747 184 VAIYTSTTDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHE 260 (401)
Q Consensus 184 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~ 260 (401)
+++++.....-+.+... .+ ....++.+ +|.+||..... ...|..+|+....-..+ +..... ...
T Consensus 140 I~~~~~dG~~~~~l~~~--~l-----~~P~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~-~~~~~~-~Pn 206 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQ--SL-----EKPRAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRII-ADTHLF-WPN 206 (349)
T ss_dssp EEEEETTSCSCEEEECT--TC-----SCEEEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEES-CCSSCS-CEE
T ss_pred EEEEcCCCCceEEEEeC--CC-----CCcceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEE-EECCCC-Ccc
Confidence 77777654432221110 11 11133443 58999986432 24899999976543332 111111 111
Q ss_pred eeEEE--cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEe-eCCEEEEEe-eCCeEEEEECCCC-cEE
Q 038747 261 SLGLF--NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIW-KNNAVLMES-DNGTLLLYDLIVE-EVR 335 (401)
Q Consensus 261 ~l~~~--~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~-~~~~il~~~-~~~~l~~yd~~t~-~~~ 335 (401)
.+..- ++.|.+.. .....+...-++. .-.+.. +. .....|.++. .++.+++.. ..+.+..+|..++ ..+
T Consensus 207 Gla~d~~~~~lY~aD--~~~~~I~~~~~dG-~~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 207 GLTIDYAGRRMYWVD--AKHHVIERANLDG-SHRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp EEEEETTTTEEEEEE--TTTTEEEEEETTS-CSCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred eEEEeCCCCEEEEEE--CCCCEEEEEeCCC-CceEEE-Ee--CCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccE
Confidence 14443 56676554 4444444443333 111111 11 1133454433 356777764 4567999995444 445
Q ss_pred EEe
Q 038747 336 DLG 338 (401)
Q Consensus 336 ~v~ 338 (401)
.+.
T Consensus 281 ~i~ 283 (349)
T 3v64_C 281 IIR 283 (349)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 180
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=23.10 E-value=3.9e+02 Score=23.58 Aligned_cols=203 Identities=11% Similarity=-0.014 Sum_probs=0.0
Q ss_pred eEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcC
Q 038747 111 IFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTST 190 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~ 190 (401)
+++...+..+.|||..++....-..+......++. .......+.+..+..-+.+-. .-.+.+|+..
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~--~~v~~~~~~~~~~~~l~s~s~------------D~~i~~wd~~ 188 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK--GYASSCQYVPDQETRLITGSG------------DQTCVLWDVT 188 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS--SCCCCCBCCSSSSSCEEEECT------------TSCEEEECTT
T ss_pred EEEeeCCCcEEEEECCCCccccCCccceeeccCCC--cceEEEEEecCCCCEEEEECC------------CCcEEEEEcC
Q ss_pred CCCccccCCCCcccceeeeCCCceeEE---CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcC
Q 038747 191 TDSWRVSKGNVEWIPYDFKSHFKSTNL---NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNN 267 (401)
Q Consensus 191 t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g 267 (401)
++.-...-.. ..+......-..+.+ +|.+......+ ..|-.+|+....-....+.............-+|
T Consensus 189 ~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 189 TGQRISIFGS--EFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp TCCEEEEECC--CSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS
T ss_pred CCcEEEEeec--ccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcceEEECCcCCCeEEEEEecCC
Q ss_pred eEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCc-----ccceEEeeCCEEEEE-eeCCeEEEEECCCCcEEE
Q 038747 268 SVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGV-----MSPRGIWKNNAVLME-SDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 268 ~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~-----~~p~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 336 (401)
...+.. .....+.||-+..+.-...+...+.... ..-+++.++|.+++. ..++.+..||..+++...
T Consensus 262 ~~l~s~--s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 262 QRFGTG--SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp SEEEEE--CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEE
T ss_pred CeEEEE--cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEE
No 181
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=23.06 E-value=3.8e+02 Score=23.38 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=19.1
Q ss_pred CCEEEEEeeCCeEEEEECCCCcEEE
Q 038747 312 NNAVLMESDNGTLLLYDLIVEEVRD 336 (401)
Q Consensus 312 ~~~il~~~~~~~l~~yd~~t~~~~~ 336 (401)
++.+++...++.+..||+.+++...
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEE
T ss_pred CceEEEEecCCEEEEEECcCCccee
Confidence 5567777788899999998877543
No 182
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=23.05 E-value=3.9e+02 Score=23.58 Aligned_cols=70 Identities=20% Similarity=0.175 Sum_probs=39.2
Q ss_pred cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcC-CCCcccceEEeeCCE-EEEE-eeCCeEEEEECCCCc--EEEEee
Q 038747 266 NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGP-FLGVMSPRGIWKNNA-VLME-SDNGTLLLYDLIVEE--VRDLGR 339 (401)
Q Consensus 266 ~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~-~~~~~~p~~~~~~~~-il~~-~~~~~l~~yd~~t~~--~~~v~~ 339 (401)
+|.+.+.. .....+.||-+.... ....+.. ......-+++.+++. +++. ..++.+..||+++++ +..+..
T Consensus 258 ~~~~l~~~--~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAG--HVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TTEEEEEE--ETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred CCCEEEEE--cCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 34443333 355678999886632 2222221 122233456666665 5554 567889999998864 455544
No 183
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=22.69 E-value=3.6e+02 Score=22.95 Aligned_cols=100 Identities=7% Similarity=-0.008 Sum_probs=54.0
Q ss_pred cEEEEEEcCCceEeEecCCCCCCCCCceeEE-EcCe-EEEEeecCC-----CCeEEEEEEcCCcEEEEEEE-cCCCCccc
Q 038747 234 NIMLSFHISDEEFREIERPRIPYSSHESLGL-FNNS-VSLLHFDKS-----SHYIDIWLMSDMNWIQQFAI-GPFLGVMS 305 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~-L~~~~~~~~-----~~~l~IW~l~~~~W~~~~~i-~~~~~~~~ 305 (401)
..|..+|..++++..+. .. ... ..+.. -+|+ |.+.. .. ...+.+|-++.........+ ........
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~--~~p-~gl~~spdg~~lyv~~--~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pd 242 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DL--DHP-NGLAFSPDEQTLYVSQ--TPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPD 242 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EE--SSE-EEEEECTTSSEEEEEE--CCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCC
T ss_pred CeEEEEcCCCCcEEEEe-cC--CCC-cceEEcCCCCEEEEEe--cCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCC
Confidence 57999999877776653 11 110 11232 2444 44443 22 24555555554332222222 11111222
Q ss_pred ceEEeeCCEEEEEeeCCeEEEEECCCCcEEEEeec
Q 038747 306 PRGIWKNNAVLMESDNGTLLLYDLIVEEVRDLGRF 340 (401)
Q Consensus 306 p~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~~ 340 (401)
-+.+..+|.|++.. .+.+..||++.+.+..+...
T Consensus 243 gi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 243 GFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp SEEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred eEEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 36667788877766 45699999988888877765
No 184
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=22.35 E-value=4.9e+02 Score=24.41 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=49.1
Q ss_pred cEEEEEEcCCceEeEecCCCCCCCCCce-eEEE-----------cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEEcCCC
Q 038747 234 NIMLSFHISDEEFREIERPRIPYSSHES-LGLF-----------NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAIGPFL 301 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~lP~~~~~~~~~-l~~~-----------~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~ 301 (401)
..|..+|+.+.+.... +... ...... +... +|.+.+.. .....+.||-++... .....+....
T Consensus 510 g~i~iw~~~~~~~~~~-~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~-~~~~~~~~h~ 584 (615)
T 1pgu_A 510 GKILLYDLQSREVKTS-RWAF-RTSKINAISWKPAEKGANEEEIEEDLVATG--SLDTNIFIYSVKRPM-KIIKALNAHK 584 (615)
T ss_dssp SCEEEEETTTTEEEEC-CSCC-CSSCEEEEEECCCC------CCSCCEEEEE--ETTSCEEEEESSCTT-CCEEETTSST
T ss_pred CeEEEeeCCCCcceeE-eecC-CCCceeEEEEcCccccccccccCCCEEEEE--cCCCcEEEEECCCCc-eechhhhcCc
Confidence 3788899977665332 2110 111111 2221 45554433 456689999998731 1222222222
Q ss_pred CcccceEEeeCCEEEEE-eeCCeEEEEECCCC
Q 038747 302 GVMSPRGIWKNNAVLME-SDNGTLLLYDLIVE 332 (401)
Q Consensus 302 ~~~~p~~~~~~~~il~~-~~~~~l~~yd~~t~ 332 (401)
....-+++.+++. ++. ..++.+..||++++
T Consensus 585 ~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 585 DGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp TCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred cceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 2233467778888 554 56778999998753
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=21.48 E-value=3.7e+02 Score=22.73 Aligned_cols=111 Identities=8% Similarity=-0.086 Sum_probs=56.3
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC-CcEEEEEE
Q 038747 218 NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD-MNWIQQFA 296 (401)
Q Consensus 218 ~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~-~~W~~~~~ 296 (401)
+|.++. +... .|.+||.+.+....+..|...... ..-...+|.+.+... . ..-.|+.++. ++......
T Consensus 47 dG~ilv-s~~~------~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~--~-~~~~v~~vd~~Gk~l~~~~ 115 (276)
T 3no2_A 47 AGEILF-SYSK------GAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWC--G-HPSTILEVNMKGEVLSKTE 115 (276)
T ss_dssp TSCEEE-ECBS------EEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEE--S-TTEEEEEECTTSCEEEEEE
T ss_pred CCCEEE-eCCC------CEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEec--C-CCCEEEEEeCCCCEEEEEe
Confidence 677665 4333 799999965554555655321110 101223455543331 1 1235666654 44333333
Q ss_pred EcCC-C-Cc--ccceEEeeCCEEEEEe-eCCeEEEEECCCCcEEEEee
Q 038747 297 IGPF-L-GV--MSPRGIWKNNAVLMES-DNGTLLLYDLIVEEVRDLGR 339 (401)
Q Consensus 297 i~~~-~-~~--~~p~~~~~~~~il~~~-~~~~l~~yd~~t~~~~~v~~ 339 (401)
+... . .. ..-+....+|.+++.. .++.+..||++.+.+-+...
T Consensus 116 ~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 116 FETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp ECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred ccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 3321 1 01 1224455677777654 56789999999554444444
No 186
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=21.28 E-value=5.2e+02 Score=24.37 Aligned_cols=109 Identities=11% Similarity=-0.014 Sum_probs=58.1
Q ss_pred eeEECc-eEEEEEeecCCCCccEEEEEEcCCceEeEec-CCCCCCCCCceeEEEcCeEEEEeecCCCCeEEEEEEcC--C
Q 038747 214 STNLNG-VFYWLVSRDDGDHSNIMLSFHISDEEFREIE-RPRIPYSSHESLGLFNNSVSLLHFDKSSHYIDIWLMSD--M 289 (401)
Q Consensus 214 ~v~~~G-~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~~~~~~~~~~~l~IW~l~~--~ 289 (401)
++..+| .+++..... ..+..+|+.+++...+. .|. . .....-+|+..++........-.||+++- +
T Consensus 116 ~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~~----~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g 185 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATE-----DRVALYALDGGGLRELARLPG----F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG 185 (582)
T ss_dssp EEEECSSCEEEEEECS-----SCEEEEEEETTEEEEEEEESS----C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred eeCCCCCeEEEEecCC-----CCceEEEccCCcEEEeecCCC----c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC
Confidence 455566 344444333 13447788887766553 222 1 11233456544332112233345777763 5
Q ss_pred cEEEEEEEcCCCCcccceEEeeCCEEEEEe-eCC--eEEEEECCCCcEE
Q 038747 290 NWIQQFAIGPFLGVMSPRGIWKNNAVLMES-DNG--TLLLYDLIVEEVR 335 (401)
Q Consensus 290 ~W~~~~~i~~~~~~~~p~~~~~~~~il~~~-~~~--~l~~yd~~t~~~~ 335 (401)
.+.. +..........++.++|+.+... .++ .++.||+++++.+
T Consensus 186 ~~~~---l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 186 GLRV---FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CCEE---ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CceE---eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 5443 32222233456777788766543 344 7999999999987
No 187
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=21.03 E-value=3.7e+02 Score=22.59 Aligned_cols=193 Identities=10% Similarity=0.024 Sum_probs=0.0
Q ss_pred eEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEEEEcC
Q 038747 111 IFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAIYTST 190 (401)
Q Consensus 111 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~ 190 (401)
|+....+..+.|||..+++....-.... .....+.+.+..+ .++.... .-.+.+|+.+
T Consensus 80 l~s~~~d~~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~--~l~s~~~-----------d~~i~iwd~~ 137 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKCLKTLKGHS---------NYVFCCNFNPQSN--LIVSGSF-----------DESVRIWDVK 137 (312)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCS---------SCEEEEEECSSSS--EEEEEET-----------TSCEEEEETT
T ss_pred EEEECCCCEEEEEECCCCcEEEEEcCCC---------CCEEEEEEcCCCC--EEEEEeC-----------CCcEEEEECC
Q ss_pred CCCccccCCCCcccceeeeCCCceeEECceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCCCCCCCceeEEEcCeEE
Q 038747 191 TDSWRVSKGNVEWIPYDFKSHFKSTNLNGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRIPYSSHESLGLFNNSVS 270 (401)
Q Consensus 191 t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~ 270 (401)
++.-...-......-....... +|.+......+ ..|..+|+.+.+....-..............-+|...
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNR-----DGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECT-----TSSEEEEEETT-----SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEE
T ss_pred CCEEEEEecCCCCcEEEEEEcC-----CCCEEEEEeCC-----CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEE
Q ss_pred EEeecCCCCeEEEEEEcCCcEEEEEEEcCCCCcccceEEee-CCEEEEE-eeCCeEEEEECCCCcEEEE
Q 038747 271 LLHFDKSSHYIDIWLMSDMNWIQQFAIGPFLGVMSPRGIWK-NNAVLME-SDNGTLLLYDLIVEEVRDL 337 (401)
Q Consensus 271 ~~~~~~~~~~l~IW~l~~~~W~~~~~i~~~~~~~~p~~~~~-~~~il~~-~~~~~l~~yd~~t~~~~~v 337 (401)
+.. .....+.||-+....-.+.+.-...........+.. ++.+++. ..++.+..||+++++....
T Consensus 208 ~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 208 LAA--TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp EEE--ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred EEE--cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh
No 188
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=20.72 E-value=4.4e+02 Score=23.28 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=51.4
Q ss_pred cEEEEEEcCCceEeEecC-CCCCCCCCceeEEE-cCeEEEEeecCCCCeEEEEEEcCCcEEEEEEE-cCCCCc-ccceEE
Q 038747 234 NIMLSFHISDEEFREIER-PRIPYSSHESLGLF-NNSVSLLHFDKSSHYIDIWLMSDMNWIQQFAI-GPFLGV-MSPRGI 309 (401)
Q Consensus 234 ~~Il~fD~~~e~~~~i~l-P~~~~~~~~~l~~~-~g~L~~~~~~~~~~~l~IW~l~~~~W~~~~~i-~~~~~~-~~p~~~ 309 (401)
..|..+|+.+.+....-. ....... ..+... +|.+.+.. .....+.||-+....- ...+ ...... ..-+.+
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTI-YSVDWSRDGALICTS--CRDKRVRVIEPRKGTV--VAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCE-EEEEECTTSSCEEEE--ETTSEEEEEETTTTEE--EEEEECSSCSSSCCEEEE
T ss_pred CEEEEEECCCCCccEEEecCCCCCce-EEEEECCCCCEEEEE--ecCCcEEEEeCCCCce--eeeeccCCCCCcceEEEE
Confidence 378889988776543211 1111100 012221 45443333 3567899998876332 2333 221111 233556
Q ss_pred eeCCEEEEEe----eCCeEEEEECCCCc
Q 038747 310 WKNNAVLMES----DNGTLLLYDLIVEE 333 (401)
Q Consensus 310 ~~~~~il~~~----~~~~l~~yd~~t~~ 333 (401)
.+++.++... .++.+..||+++.+
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred cCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 6788887765 57789999998754
No 189
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=20.51 E-value=6.4e+02 Score=25.11 Aligned_cols=203 Identities=6% Similarity=-0.029 Sum_probs=94.1
Q ss_pred cccceEEEeeCCceEEEccccccccccCCCCCCCCCcceeeeeeEEEEEeCCCCCeEEEEEEEEeccccCCCCCcceEEE
Q 038747 107 PYDGIFCLCDDSLIFLWNPATKECRTLPNYSNFLPTCATFLYENAIFGLDHTSGDYKVVFICELWNEQIEAPYEHSLVAI 186 (401)
Q Consensus 107 s~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (401)
..+|-|.+.....++++||.++++..+...+... .+ -.......+..|.... +.++. ..-.+..
T Consensus 271 d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~-~~-l~~~~i~~i~~D~~g~----lWigt----------~~~Gl~~ 334 (795)
T 4a2l_A 271 DSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVEN-GS-LSQRSVRSIFMDSQGG----MWLGT----------YFGGLNY 334 (795)
T ss_dssp CTTSCEEEEESSCEEEEETTTTEEEEECCCTTST-TS-CSSSCEEEEEECTTSC----EEEEE----------SSSCEEE
T ss_pred cCCCCEEEEeCChhheEcCCCCeEEEEecCCCCC-CC-CCCCcEEEEEEeCCcC----EEEEE----------CCCCeEE
Confidence 3455555554447888898888877664432110 00 0112234444454322 22221 1234556
Q ss_pred EEcCCCCccccCCCCc--ccceeeeCCCceeEE--CceEEEEEeecCCCCccEEEEEEcCCceEeEecCCCC-----CCC
Q 038747 187 YTSTTDSWRVSKGNVE--WIPYDFKSHFKSTNL--NGVFYWLVSRDDGDHSNIMLSFHISDEEFREIERPRI-----PYS 257 (401)
Q Consensus 187 yss~t~~W~~~~~~~~--~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~Il~fD~~~e~~~~i~lP~~-----~~~ 257 (401)
|+..++.++....... .++. ..-.+++. +|.+ |+.... ..|..+|..+.+|..+..+.. ...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~---~~V~~i~~d~~g~l-WiGt~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~ 405 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSD---NVVSCIVEDKDKNL-WIGTND-----GGLNLYNPITQRFTSYTLQEDESARGIGS 405 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSC---SSEEEEEECTTSCE-EEEESS-----SCEEEECTTTCCEEEECCC------CCSC
T ss_pred eCCCcccceEEcCCCCCCCCCC---CeeEEEEECCCCCE-EEEECC-----CCeEEEcCCCCcEEEEecCCCCcccCCCC
Confidence 6666665544322100 1110 00122333 3554 454432 278999999999988764331 111
Q ss_pred CCce-eEE-EcCe-EEEEeecCCCCeEEEEEEcCCcEEEEEEEcC-CC-CcccceEEeeCCEEEEEeeCCeEEEEECCCC
Q 038747 258 SHES-LGL-FNNS-VSLLHFDKSSHYIDIWLMSDMNWIQQFAIGP-FL-GVMSPRGIWKNNAVLMESDNGTLLLYDLIVE 332 (401)
Q Consensus 258 ~~~~-l~~-~~g~-L~~~~~~~~~~~l~IW~l~~~~W~~~~~i~~-~~-~~~~p~~~~~~~~il~~~~~~~l~~yd~~t~ 332 (401)
.... +.. .+|. |-+-. ....+..+-.+.+.+.......+ .. .....+...++|.|++.+. ..++.||++++
T Consensus 406 ~~v~~i~~d~~g~~lWigt---~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGT---HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR 481 (795)
T ss_dssp SCEEEEEEETTTTEEEEEE---TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT
T ss_pred ccEEEEEEcCCCCEEEEEe---CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC
Confidence 1111 222 2455 54432 22233333322233322111011 11 1111233334688888776 56999999999
Q ss_pred cEEEEe
Q 038747 333 EVRDLG 338 (401)
Q Consensus 333 ~~~~v~ 338 (401)
+++.+.
T Consensus 482 ~~~~~~ 487 (795)
T 4a2l_A 482 SFTTIE 487 (795)
T ss_dssp EEEECC
T ss_pred eEEEcc
Confidence 887764
Done!