Your job contains 1 sequence.
>038749
MASTSKVDSSVDDEAEEEEFERFDDFTLASSWERFISEIEAICRQWLADGSKNLLEKGAI
QLDSSKNLYKAKSELKYFMKSYCMEYYFEIKKSGEFTVWDCTLHDLQLCFGVKEFLVIAP
QSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIGIQNMGTIFTRRFE
ADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFTMKLTYKTLPYDDDDDMR
GEDVENTEPTDFPGGESGTRTQWDDDCPWSEWYSAEDLVKGFGLVVIWSEKTVEGSFEMA
EIENSSPHEAEKWILFPNICFFSLMHLKMSFEAQFMEDFVSVENPGSDNLKSSMVIPSPT
IIDRVLKDLFHEGVQLPDFAKGQHRSSRSIKGARLESLFAQFCLHSLWFGNCNIRAIAVL
WIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEEFQDCIG
SNDPSPADIKEDGQAVDGSNNLRIPDENFDRNCDSQLTADGLRESGNAIQRYTMKPQDVA
SIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSF
EFSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKE
NWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLL
EQMVCTAFRASADTLNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLR
RLCVVFEHVEKLLTVAASLHRKFLQAPRISEAIFSDFYDFYLPKMGRGSGQEDVQMEFDM
KLQLRNHERQLVSNMFMPPTANQSWRKVLSMGNLLNGHEPILREIIFSSSDHVNGGHYAP
STPRAYQQEIETYRMYICGTSNDLRVALSVTSCD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038749
(934 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171203 - symbol:AT5G58510 "AT5G58510" species... 2852 4.4e-297 1
UNIPROTKB|E1BT09 - symbol:RAB3GAP1 "Uncharacterized prote... 422 2.9e-50 3
UNIPROTKB|A4FUE5 - symbol:RAB3GAP1 "RAB3GAP1 protein" spe... 410 3.1e-49 3
UNIPROTKB|E2RK37 - symbol:RAB3GAP1 "Uncharacterized prote... 417 3.9e-49 4
MGI|MGI:2445001 - symbol:Rab3gap1 "RAB3 GTPase activating... 410 5.6e-48 3
UNIPROTKB|C9J837 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 389 6.5e-47 4
UNIPROTKB|Q15042 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 389 7.3e-47 3
UNIPROTKB|J9NVN6 - symbol:RAB3GAP1 "Uncharacterized prote... 417 5.0e-46 2
ZFIN|ZDB-GENE-061027-53 - symbol:rab3gap1 "RAB3 GTPase ac... 392 5.5e-46 3
UNIPROTKB|F1S0D4 - symbol:RAB3GAP1 "Uncharacterized prote... 413 1.3e-45 2
UNIPROTKB|A6H8Z3 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 389 7.9e-43 3
RGD|1306487 - symbol:RGD1306487 "similar to RAB3 GTPase-a... 416 1.4e-35 1
DICTYBASE|DDB_G0292124 - symbol:DDB_G0292124 "Rab3 GTPase... 292 1.9e-34 5
FB|FBgn0051935 - symbol:CG31935 species:7227 "Drosophila ... 241 2.0e-30 4
TAIR|locus:2161660 - symbol:AT5G55060 "AT5G55060" species... 294 8.9e-30 2
WB|WBGene00004317 - symbol:rbg-1 species:6239 "Caenorhabd... 151 1.1e-18 4
UNIPROTKB|Q93538 - symbol:rbg-1 "Rab3 GTPase-activating p... 151 1.1e-18 4
>TAIR|locus:2171203 [details] [associations]
symbol:AT5G58510 "AT5G58510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] [GO:0006486
"protein glycosylation" evidence=RCA] InterPro:IPR026147
Pfam:PF13890 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005097 GO:GO:0032851 eggNOG:NOG307494 PANTHER:PTHR21422
EMBL:AY091055 EMBL:AY117361 IPI:IPI00528887 RefSeq:NP_200659.2
UniGene:At.29276 PaxDb:Q8RWW8 PRIDE:Q8RWW8
EnsemblPlants:AT5G58510.1 GeneID:835964 KEGG:ath:AT5G58510
TAIR:At5g58510 HOGENOM:HOG000029929 InParanoid:Q8RWW8 OMA:EWYSAED
PhylomeDB:Q8RWW8 ProtClustDB:CLSN2690249 ArrayExpress:Q8RWW8
Genevestigator:Q8RWW8 Uniprot:Q8RWW8
Length = 963
Score = 2852 (1009.0 bits), Expect = 4.4e-297, P = 4.4e-297
Identities = 554/867 (63%), Positives = 665/867 (76%)
Query: 99 WDCTLHDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVH 158
W+ HDLQLCFGVK+FL+IAPQSASGV+LD PE+SKLLSAVAIALSNC SLWPAFVPVH
Sbjct: 103 WNSNSHDLQLCFGVKDFLLIAPQSASGVLLDTPESSKLLSAVAIALSNCGSLWPAFVPVH 162
Query: 159 DPSRNAFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVF 218
DPSR A+IGIQNMGT+FTRRFEADR+ SQVPVKLMHLEGLYELFVSKF YS +DFSMH F
Sbjct: 163 DPSRKAYIGIQNMGTVFTRRFEADRVGSQVPVKLMHLEGLYELFVSKFVYSGVDFSMHTF 222
Query: 219 KVRFTMKLTYKTLPYXXXXX-MRGEDV--ENTEPTDFPGGESGTRTQWDDDCPWSEWYSA 275
+V F M+LTY+T PY + ++V + ++ + G ES + WDDDCPWSEWYSA
Sbjct: 223 RVHFMMRLTYQTFPYDEEDEEIDTDEVMGDKSDTAEHYGSESRNKVLWDDDCPWSEWYSA 282
Query: 276 EDLVKGFGLVVIWSEKTVEGSFEMAEIENSSPHEAEKWILFP-------------NICFF 322
ED ++GF LVV W+++TVE + EMAE+EN+SPH+AEKWIL P I F
Sbjct: 283 EDPLRGFELVVTWADRTVESTLEMAELENASPHDAEKWILHPILSPYLGDPSHGKRIDFA 342
Query: 323 SLM-----HLKMSFEAQFMEDFVSVENPGSDNLKSSMVIPSPTIIDRVLKDLFHEGVQLP 377
S + L SF AQFMEDFVSVENP S+NLK+S+VIP P+++DRV+KDLF EG +LP
Sbjct: 343 SQLLCLVEALDSSFSAQFMEDFVSVENPSSENLKTSVVIPPPSVLDRVIKDLFREGSKLP 402
Query: 378 DFAKGQHRSSRSIKGARLESLFAQFCLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQP 437
DF KG+HR SR++K A LESLF QFCLHSLWFGNCNIRAIA LWIEFVRE+RW WEE+QP
Sbjct: 403 DFTKGEHRLSRALKAAPLESLFTQFCLHSLWFGNCNIRAIAFLWIEFVREVRWCWEETQP 462
Query: 438 LPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPSPADIK-EDGQAV 496
LPKMP++GSIDLS+CLINQKL +LAICIEK RE+NEEF DCIGS+D S A + E+ V
Sbjct: 463 LPKMPIDGSIDLSSCLINQKLHLLAICIEKKREMNEEFLDCIGSDDSSDASVSMEEHHKV 522
Query: 497 DGSNNLRIPDENFDRNCDSQLTADGLRESGNAIQRYTMKPQDVASIDKKPSDFVRRGSAG 556
D N +E R DS + D ++ R+ K + S+++ P+D +RRGSAG
Sbjct: 523 DKRRNTS-SEEELRRKRDSSIAEDTSKQL-----RFERKTERTNSVNQSPTDAIRRGSAG 576
Query: 557 KVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFEFSAQLERDILLSDMS 616
VG+MMLLKS Q +HAPFTQD PLMTEDMHEERL AVEAF +S QLE+DILLSDMS
Sbjct: 577 PVGTMMLLKSRQQLHAPFTQDPPLMTEDMHEERLQAVEAFGDSLNVPGQLEKDILLSDMS 636
Query: 617 AFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEHG 676
AFKAANPDAVFEDFIRWHSPGDW + + K PS P+ E K+ WPP+GRLSQRMS+ G
Sbjct: 637 AFKAANPDAVFEDFIRWHSPGDWESFEPKTTEPSAGPSTEGSKDEWPPRGRLSQRMSDQG 696
Query: 677 NLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMVCTAFRASADTLN 736
NLWRK WN+APA+ A +QKPLLDPNREGEKI+HYLET+RP+ LLEQMVCTAFR SADTLN
Sbjct: 697 NLWRKSWNDAPALPADDQKPLLDPNREGEKIVHYLETVRPHQLLEQMVCTAFRGSADTLN 756
Query: 737 QTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLTVA 796
QT+ G ++QM K++QLY+ M L LQ NNL ++T++DL+RLC+VFE+VEKL+ VA
Sbjct: 757 QTNVGNMRQMTSKLEQLYLIMKFTLGALQRNNLPDKAKTVKDLKRLCMVFENVEKLVAVA 816
Query: 797 ASLHRKFLQAPRISEAIFSDFYDFYLPKMGRGSGQEDVQMEFDMKLQLRN---HERQLVS 853
AS+HRKFL A R+++ IFSDFY Y P MG + E+ + +M++ + ERQ+VS
Sbjct: 817 ASIHRKFLDASRLAQVIFSDFYGVYAPTMGMSANDEENKSRTEMEVSRQEVSLRERQVVS 876
Query: 854 NMFMPPTANQSWRKVLSMGNLLNGHEPILREIIFSSSDHVNGG-HYAPSTPRAYQ----- 907
N+F PP+ANQSWRKVLSMGNLLNGHEPILREIIFS+ D VN G HYA + A
Sbjct: 877 NLFSPPSANQSWRKVLSMGNLLNGHEPILREIIFSTGDDVNNGIHYAAAADVAATSDRKG 936
Query: 908 QEIETYRMYICGTSNDLRVALSVTSCD 934
+EIET+RMY+ GTSNDLRV LSVTSCD
Sbjct: 937 EEIETHRMYVSGTSNDLRVGLSVTSCD 963
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 206/324 (63%), Positives = 245/324 (75%)
Query: 1 MASTSKVDSSVXXXXXXXXXXXXXXXTLASSWERFISEIEAICRQWLADGSKNLLEKGAI 60
MAS SK + TLASSWERFIS+IEA CRQWLADG KNL+EKGA+
Sbjct: 1 MASVSKSNHLEEDDDAEEEVQHFDDFTLASSWERFISDIEATCRQWLADGPKNLVEKGAV 60
Query: 61 QLDSSKNLYKAKSELKYFMKSYCMEYYFEIKKSGEFTV----WDCTLHDLQLCFGVKEFL 116
++ SKNL+ K ELK KSYCME+YF+I +G W+ HDLQLCFGVK+FL
Sbjct: 61 AVEDSKNLFTVKHELKNVAKSYCMEFYFQIDNNGSQQAGIGNWNSNSHDLQLCFGVKDFL 120
Query: 117 VIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIGIQNMGTIFT 176
+IAPQSASGV+LD PE+SKLLSAVAIALSNC SLWPAFVPVHDPSR A+IGIQNMGT+FT
Sbjct: 121 LIAPQSASGVLLDTPESSKLLSAVAIALSNCGSLWPAFVPVHDPSRKAYIGIQNMGTVFT 180
Query: 177 RRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFTMKLTYKTLPYXXX 236
RRFEADR+ SQVPVKLMHLEGLYELFVSKF YS +DFSMH F+V F M+LTY+T PY
Sbjct: 181 RRFEADRVGSQVPVKLMHLEGLYELFVSKFVYSGVDFSMHTFRVHFMMRLTYQTFPYDEE 240
Query: 237 XX-MRGEDV--ENTEPTDFPGGESGTRTQWDDDCPWSEWYSAEDLVKGFGLVVIWSEKTV 293
+ ++V + ++ + G ES + WDDDCPWSEWYSAED ++GF LVV W+++TV
Sbjct: 241 DEEIDTDEVMGDKSDTAEHYGSESRNKVLWDDDCPWSEWYSAEDPLRGFELVVTWADRTV 300
Query: 294 EGSFEMAEIENSSPHEAEKWILFP 317
E + EMAE+EN+SPH+AEKWIL P
Sbjct: 301 ESTLEMAELENASPHDAEKWILHP 324
>UNIPROTKB|E1BT09 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 OMA:LDPIQAP
EMBL:AADN02016954 EMBL:AADN02016953 IPI:IPI00599707
Ensembl:ENSGALT00000019948 Uniprot:E1BT09
Length = 988
Score = 422 (153.6 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 132/429 (30%), Positives = 205/429 (47%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + NG D
Sbjct: 453 KSAPSDSLTYKLALCLCMINFYHGGVKGVAHLWQEFVLEMRYRWENNYLIPGL-ANGPPD 511
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPSPADIKED-GQAVDGS-NNLRIPD 506
L CL++QKLQML CIE+ + +E + +D SP D G+ D S +NL+ D
Sbjct: 512 LRCCLLHQKLQMLNCCIERKKARDEGKKG--NMSDRSPGGSSGDTGKVADHSGDNLKETD 569
Query: 507 ENFDRNCDS---------QLTADGLRESGNAIQRYTMKPQDVASIDKKPSDFVRRGSAGK 557
+ ++ +S + +D GN + K +K+P + G
Sbjct: 570 KEVGKSWESWSDSEEEFFECLSDTEDLKGNGQENG--KKGGTKEGNKEPVNLKPEGRLHP 627
Query: 558 VGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSD 614
G + LL + ++ P TQ+ MTED+ EE+ + S E A+++ LLSD
Sbjct: 628 HGKLTLLHPGEPLYIPITQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSD 687
Query: 615 MSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSE 674
M +FKAANP EDF+RW+SP D++ ++ V D K N +G LS RM
Sbjct: 688 MESFKAANPGCCLEDFVRWYSPRDYIEEE-----------VVDEKGNVVIKGELSARMKI 736
Query: 675 HGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMVCTAFRASADT 734
N+W + W A V A QK L D RE EK+LHYL +P DL ++ A+
Sbjct: 737 PSNMWVEAWETAKPVPARRQKRLFDDTREAEKVLHYLAVQKPADLARHLLPCIIHAAVLK 796
Query: 735 LNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLT 794
+ + K+ + I+ SS K L+ N + + +E++ + + VE ++
Sbjct: 797 VKEEEVLENISSVKKIIKQIISHSS--KVLRFPN--PEDKKLEEI--IAQIMS-VEAIIA 849
Query: 795 VAASLHRKF 803
A SL KF
Sbjct: 850 RARSLKAKF 858
Score = 148 (57.2 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + + VL + + LLS+V+IAL N P FV +H R
Sbjct: 117 HCLVRWYGLREFVVIAPAANNDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHQKWRR 176
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSK 205
++G + G FE + +VP + HL GL ++F SK
Sbjct: 177 MYVG-ECQGPGVRTDFEMVHL-RKVPSQYTHLSGLLDVFKSK 216
Score = 84 (34.6 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 27 TLASSWERFISEIEAICRQWLADG--SKNLLEKGAIQLDSSKNLYKAKS-ELKYFMKSYC 83
T AS WERFIS+IE + W G S LEKG + +++ KS E+ + +
Sbjct: 18 TTASEWERFISKIEEVLNDWKLIGISSGKPLEKGVY----TTGVWEEKSDEISFADFKFS 73
Query: 84 MEYYFEIKKSGE 95
+ +++ +++ G+
Sbjct: 74 VTHHYLVQEPGD 85
Score = 44 (20.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 274 SAEDLVKGFGLVVIWSEKTVEGSFEMAEIENSSPH 308
S + L KG +W EK+ E SF A+ + S H
Sbjct: 44 SGKPLEKGVYTTGVWEEKSDEISF--ADFKFSVTH 76
>UNIPROTKB|A4FUE5 [details] [associations]
symbol:RAB3GAP1 "RAB3GAP1 protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 CTD:22930
HOGENOM:HOG000253924 HOVERGEN:HBG079116 OrthoDB:EOG495ZR7
OMA:LDPIQAP EMBL:DAAA02005002 EMBL:DAAA02005003 EMBL:BC114755
IPI:IPI00692668 RefSeq:NP_001076952.1 UniGene:Bt.6988
Ensembl:ENSBTAT00000017891 GeneID:535393 KEGG:bta:535393
InParanoid:A4FUE5 NextBio:20876729 Uniprot:A4FUE5
Length = 982
Score = 410 (149.4 bits), Expect = 3.1e-49, Sum P(3) = 3.1e-49
Identities = 136/449 (30%), Positives = 212/449 (47%)
Query: 377 PDFAKGQHRSSRSIKGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEE 434
P ++ K A +SL + CL + F + ++ +A LW EFV E+R+ WE
Sbjct: 435 PPLESEEYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWEN 494
Query: 435 SQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEEFQDCIGSN--DPSPADIKED 492
+ +P + +G DL CL++QKLQML CIE+ + +E + N + D +
Sbjct: 495 NFLIPGL-ASGPPDLRCCLLHQKLQMLNCCIERKKARDEGRKTSPSDNVTNTYSGDAGKS 553
Query: 493 GQAVDGSNNLRIPDEN-------FDRNCDSQ-----LTADGLRESGNAIQRYTMK--PQD 538
G + G +NLR D++ +D DS+ +D GN Q K P++
Sbjct: 554 GDQL-GPDNLRETDKDKGEVGKSWDSWSDSEEEFFECLSDTEELKGNG-QESGKKGGPKE 611
Query: 539 VASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSN 598
+AS+ KP G + G + LL + + ++ P TQ+ MTED+ EE+ +
Sbjct: 612 MASL--KPE-----GRLHQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGT 664
Query: 599 SFE---FSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAV 655
S E A+++ LLSDM +FKAANP EDF+RW+SP D++ ++ V
Sbjct: 665 SAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRDYIEEE-----------V 713
Query: 656 EDLKENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLR 715
D K N +G LS RM N+W + W A + A Q+ L D RE EK+LHYL +
Sbjct: 714 VDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAVQK 773
Query: 716 PNDLLEQMV-CTAFRASADTLNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSE 774
P DL ++ C A + + + + Q+ I+ SS K L N D +
Sbjct: 774 PADLARHLLPCVIHAAVLKVKEEESLENISSVKKIIKQI-ISHSS--KVLHFPNPE-DKK 829
Query: 775 TIEDLRRLCVVFEHVEKLLTVAASLHRKF 803
E + ++ +VE ++ A SL KF
Sbjct: 830 LEEIIHQIT----NVEAIIARARSLKAKF 854
Score = 151 (58.2 bits), Expect = 3.1e-49, Sum P(3) = 3.1e-49
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + + VL + + LLS+V+IAL N P FV +H R
Sbjct: 116 HCLVRWYGLREFVVIAPAANNDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 175
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 176 MYVG-ECQGPGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVNIAIRFT 233
Query: 224 MKL 226
L
Sbjct: 234 YVL 236
Score = 84 (34.6 bits), Expect = 3.1e-49, Sum P(3) = 3.1e-49
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKS-ELKYFMKSYC 83
T AS WERFIS++E + W G+ LEKG + ++ KS E+ + +
Sbjct: 18 TTASEWERFISKVEEVLNDWKLIGNSVGKPLEKGIF----TSGTWEEKSDEISFADFKFS 73
Query: 84 MEYYFEIKKSGEFTVWDCTLHDL 106
+ +++ +++S + D L D+
Sbjct: 74 VTHHYLVQESTDKEAKDEVLEDV 96
Score = 45 (20.9 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 554 SAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHE-ERLHAVEAFSNSFE--FSAQ-LERD 609
S K+ ++ S + +H P +D L E +H+ + A+ A + S + F + E++
Sbjct: 804 SVKKIIKQIISHSSKVLHFPNPEDKKL-EEIIHQITNVEAIIARARSLKAKFGTEKCEQE 862
Query: 610 ILLSDMSAFKAA---NPDAVFEDFIRWHSPGDWLND--DGKENGPSGIPAVEDLKENWPP 664
D+ F + P+ + R H+ G ++ + + PA E+LK PP
Sbjct: 863 EEKEDLERFVSCLLEQPEVLVVGAGRGHA-GRIIHKLFVNAQRAATMTPAEEELKRMGPP 921
Query: 665 Q 665
+
Sbjct: 922 E 922
>UNIPROTKB|E2RK37 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] InterPro:IPR026147 Pfam:PF13890
GO:GO:0005097 GO:GO:0032851 GeneTree:ENSGT00390000006705
PANTHER:PTHR21422 OMA:LDPIQAP EMBL:AAEX03011910 EMBL:AAEX03011909
Ensembl:ENSCAFT00000008124 Uniprot:E2RK37
Length = 979
Score = 417 (151.9 bits), Expect = 3.9e-49, Sum P(4) = 3.9e-49
Identities = 136/433 (31%), Positives = 212/433 (48%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + +G D
Sbjct: 443 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-TSGPPD 501
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRIPDE- 507
L CL++QKLQML CIE+ + +E + +++ P D + G + G +NL+ D+
Sbjct: 502 LRCCLLHQKLQMLNCCIERKKARDEGRKT--NTSEIYPGDTGKAGDQL-GPDNLKDMDKE 558
Query: 508 ------NFDRNCDSQ-----LTADGLRESGNAIQRYTMK--PQDVASIDKKPSDFVRRGS 554
++D DS+ +D GN Q K P++VAS+ KP G
Sbjct: 559 KGEIGKSWDSWSDSEEEFFECLSDTEELKGNG-QESGKKGGPKEVASL--KPE-----GR 610
Query: 555 AGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDIL 611
+ G + LL + + ++ P TQ+ MTED+ EE+ + S E A+++ L
Sbjct: 611 LHQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACL 670
Query: 612 LSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQR 671
LSDM +FKAANP EDF+RW+SP D++ ++ V D K N +G LS R
Sbjct: 671 LSDMESFKAANPGCFLEDFVRWYSPRDYIEEE-----------VVDEKGNMVLKGELSAR 719
Query: 672 MSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRA 730
M N+W + W A + A Q+ L D RE EK+LHYL +P DL ++ C A
Sbjct: 720 MKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAVQKPADLARHLLPCVIHAA 779
Query: 731 SADTLNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVE 790
+ + + + + Q+ IT SS K L N D + E + ++ +VE
Sbjct: 780 VLKVKEEENLENISSVKKIIKQI-ITHSS--KVLHFPNPE-DKKLEEIIHQIT----NVE 831
Query: 791 KLLTVAASLHRKF 803
++ A SL KF
Sbjct: 832 AIIARARSLKAKF 844
Score = 149 (57.5 bits), Expect = 3.9e-49, Sum P(4) = 3.9e-49
Identities = 41/123 (33%), Positives = 60/123 (48%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + VL + + LLS+V+IAL N P FV +H R
Sbjct: 110 HCLVRWYGLREFVVIAPAANHDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 169
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 170 MYVG-ECQGHGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFT 227
Query: 224 MKL 226
L
Sbjct: 228 YVL 230
Score = 81 (33.6 bits), Expect = 3.9e-49, Sum P(4) = 3.9e-49
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKS-ELKYFMKSYC 83
T AS WERFIS++E + W G+ LEKG + ++ KS E+ + +
Sbjct: 12 TTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIF----TSGAWEEKSDEISFADFKFS 67
Query: 84 MEYYFEIKKSGEFTVWDCTLHDL 106
+ +++ ++ S + D L D+
Sbjct: 68 VTHHYLVQDSADKEGKDEVLEDV 90
Score = 38 (18.4 bits), Expect = 3.9e-49, Sum P(4) = 3.9e-49
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 774 ETIEDLRRLCVVFEHVEKLLTVAAS-------LHRKFLQAPRISEA 812
E EDL R ++L V A +H+ F+ A R++E+
Sbjct: 853 EEKEDLERFVSCLLEQPEVLVVGAGRGHAGKIIHKLFVNAQRLTES 898
>MGI|MGI:2445001 [details] [associations]
symbol:Rab3gap1 "RAB3 GTPase activating protein subunit 1"
species:10090 "Mus musculus" [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420
"brain development" evidence=ISO] [GO:0017137 "Rab GTPase binding"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=ISO] [GO:0043010 "camera-type eye development"
evidence=ISO] [GO:0043087 "regulation of GTPase activity"
evidence=ISO] [GO:0060325 "face morphogenesis" evidence=ISO]
InterPro:IPR026147 Pfam:PF13890 MGI:MGI:2445001 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0005097 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 CTD:22930
HOVERGEN:HBG079116 OrthoDB:EOG495ZR7 ChiTaRS:RAB3GAP1 EMBL:AK172881
EMBL:AK076244 EMBL:AK076399 EMBL:AK080432 EMBL:AK164523
EMBL:BC028996 EMBL:BC046297 IPI:IPI00749720 RefSeq:NP_848805.2
UniGene:Mm.489713 ProteinModelPortal:Q80UJ7 STRING:Q80UJ7
PhosphoSite:Q80UJ7 PaxDb:Q80UJ7 PRIDE:Q80UJ7
Ensembl:ENSMUST00000037649 GeneID:226407 KEGG:mmu:226407
InParanoid:Q3TPB6 OMA:LDPIQAP NextBio:378122 Bgee:Q80UJ7
CleanEx:MM_RAB3GAP1 Genevestigator:Q80UJ7
GermOnline:ENSMUSG00000036104 Uniprot:Q80UJ7
Length = 981
Score = 410 (149.4 bits), Expect = 5.6e-48, Sum P(3) = 5.6e-48
Identities = 143/485 (29%), Positives = 229/485 (47%)
Query: 343 ENP-GSDNLKSSMVIPSPTII-DRVLKDLFHEGVQLPDFAKGQHRSSRSIKGARLESLFA 400
E+P SD L + ++ P + ++ L +P G + K A +SL
Sbjct: 398 ESPLNSDVLNTILLFLFPDAVSEKPLDGTTSIDNSIPAPEAGDYTLYNQFKSAPSDSLTY 457
Query: 401 QF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKL 458
+ CL + F + ++ +A LW EFV E+R+ WE + +P + +GS DL CL++QKL
Sbjct: 458 KLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-ASGSPDLRCCLLHQKL 516
Query: 459 QMLAICIEKMRELNEEFQDCIGSNDPS--PADIKEDGQAVDGSNNLRIPDE-------NF 509
QML CIE+ + +E + + + S P D + G + G ++LR ++ ++
Sbjct: 517 QMLNCCIERKKARDEGKKTSLSDSTTSAYPGDAGKTGGQL-GLDHLRDTEKEKGEVGKSW 575
Query: 510 DRNCDSQ-----LTADGLRESGNAIQRYTMK--PQDVASIDKKPSDFVRRGSAGKVGSMM 562
D DS+ +D GN Q K P+++A++ KP G + G +
Sbjct: 576 DSWSDSEEEFFECLSDTEDLKGNG-QESGKKGGPKEMANL--KPE-----GRLHQHGKLT 627
Query: 563 LLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSDMSAFK 619
LL + + ++ P TQ+ MTED+ EE+ + S E A+++ LLSDM +FK
Sbjct: 628 LLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFK 687
Query: 620 AANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEHGNLW 679
AANP EDF+RW+SP D++ ++ V D K N +G LS RM N+W
Sbjct: 688 AANPGCFLEDFVRWYSPRDYIEEE-----------VTDEKGNVVLKGELSARMKIPSNMW 736
Query: 680 RKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRASADTLNQT 738
+ W A V A Q+ L D RE EK+LHYL +P DL ++ C A +
Sbjct: 737 VEAWETAKPVPARRQRRLFDDTREAEKVLHYLAMQKPADLARHLLPCVIHAAVLKVKEEE 796
Query: 739 HFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLTVAAS 798
+ + + Q+ I SS K L N + + +E++ + VE ++ A S
Sbjct: 797 SLENIPSVKKIIKQI-IAHSS--KVLHFPN--PEDKKLEEI---ILQITTVEAIIARARS 848
Query: 799 LHRKF 803
L KF
Sbjct: 849 LKAKF 853
Score = 148 (57.2 bits), Expect = 5.6e-48, Sum P(3) = 5.6e-48
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + S VL + + LLS+++IAL N P FV +H R
Sbjct: 116 HCLVRWYGLREFVVIAPAAHSDAVLSESKCNLLLSSISIALGNTGCQVPLFVQIHHKWRR 175
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSK 205
++G + G FE + +VP + HL GL ++F SK
Sbjct: 176 MYMG-ECQGPGVRTDFEMVHL-RKVPSQYTHLSGLLDIFKSK 215
Score = 75 (31.5 bits), Expect = 5.6e-48, Sum P(3) = 5.6e-48
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKSELKYFMKSYCM 84
T AS WERFIS++E + W G LEKG +S + E+ + + +
Sbjct: 18 TTASEWERFISKVEEVLNDWKLIGPSLGKPLEKGIF---TSGTWEERSDEISFADFRFSV 74
Query: 85 EYYFEIKKSGEFTVWDCTLHD 105
+++ +++S + D L D
Sbjct: 75 THHYLVQESPDKERKDEELED 95
>UNIPROTKB|C9J837 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 PANTHER:PTHR21422 CTD:22930
HOGENOM:HOG000253924 UniGene:Hs.306327 GeneID:22930 KEGG:hsa:22930
HGNC:HGNC:17063 PharmGKB:PA134969639 ChiTaRS:RAB3GAP1
GenomeRNAi:22930 NextBio:43655 OMA:LDPIQAP EMBL:AC017031
EMBL:AC020602 IPI:IPI00927682 RefSeq:NP_001165906.1
ProteinModelPortal:C9J837 STRING:C9J837 PRIDE:C9J837
Ensembl:ENST00000442034 UCSC:uc010fnf.3 ArrayExpress:C9J837
Bgee:C9J837 Uniprot:C9J837
Length = 988
Score = 389 (142.0 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 129/429 (30%), Positives = 204/429 (47%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + +G D
Sbjct: 449 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-ASGPPD 507
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPS--PADIKEDGQAVDGSNNLRIPD 506
L CL++QKLQML CIE+ ++ +E + S+ + P D + G + +NL+ D
Sbjct: 508 LRCCLLHQKLQMLNCCIER-KKARDEGKKTSASDVTNIYPGDAGKAGDQLV-PDNLKETD 565
Query: 507 EN---FDRNCDSQLTADGLRESGNAIQRYTMKPQDVASIDKK--PSDFVRRGSAGKV--- 558
+ ++ DS +D E + + KK P + G++
Sbjct: 566 KEKGEVGKSWDSW--SDSEEEFFECLSDTEELKGNGQESGKKGGPKEMANLRPEGRLYQH 623
Query: 559 GSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSDM 615
G + LL + + ++ P TQ+ MTED+ EE+ + S E A+++ LLSDM
Sbjct: 624 GKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDM 683
Query: 616 SAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEH 675
+FKAANP EDF+RW+SP D++ ++ V D K N +G LS RM
Sbjct: 684 ESFKAANPGCSLEDFVRWYSPRDYIEEE-----------VIDEKGNVVLKGELSARMKIP 732
Query: 676 GNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRASADT 734
N+W + W A + A Q+ L D RE EK+LHYL +P DL ++ C A
Sbjct: 733 SNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCVIHAAVLKV 792
Query: 735 LNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLT 794
+ + + + Q+ I+ SS K L N D + E + ++ +VE L+
Sbjct: 793 KEEESLENISSVKKIIKQI-ISHSS--KVLHFPNPE-DKKLEEIIHQIT----NVEALIA 844
Query: 795 VAASLHRKF 803
A SL KF
Sbjct: 845 RARSLKAKF 853
Score = 155 (59.6 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + S VL + + LLS+V+IAL N P FV +H R
Sbjct: 116 HCLVRWYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 175
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 176 MYVG-ECQGPGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFT 233
Query: 224 MKL 226
L
Sbjct: 234 YVL 236
Score = 80 (33.2 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKS-ELKYFMKSYC 83
T AS WERFIS++E + W G+ LEKG + ++ KS E+ + +
Sbjct: 18 TTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIF----TSGTWEEKSDEISFADFKFS 73
Query: 84 MEYYFEIKKSGEFTVWDCTLHDL 106
+ +++ +++S + D L D+
Sbjct: 74 VTHHYLVQESTDKEGKDELLEDV 96
Score = 43 (20.2 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 774 ETIEDLRRL--CVVFEHVEKLLTVAAS------LHRKFLQAPRISEA 812
E EDL R C++ E E L+T A +H+ F+ A R++E+
Sbjct: 862 EEKEDLERFVSCLL-EQPEVLVTGAGRGHAGRIIHKLFVNAQRLTES 907
>UNIPROTKB|Q15042 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IDA] [GO:0017137 "Rab GTPase binding"
evidence=IPI] [GO:0043087 "regulation of GTPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0060325
"face morphogenesis" evidence=IMP] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0043010 GO:GO:0060325 GO:GO:0021854
GO:GO:0005097 Orphanet:2510 eggNOG:NOG307494 PANTHER:PTHR21422
CTD:22930 HOGENOM:HOG000253924 HOVERGEN:HBG079116 EMBL:D31886
EMBL:AL096752 EMBL:BC022977 IPI:IPI00014235 IPI:IPI00555624
RefSeq:NP_036365.1 UniGene:Hs.306327 ProteinModelPortal:Q15042
IntAct:Q15042 STRING:Q15042 PhosphoSite:Q15042 DMDM:62511099
PaxDb:Q15042 PRIDE:Q15042 Ensembl:ENST00000264158 GeneID:22930
KEGG:hsa:22930 UCSC:uc002tuj.3 GeneCards:GC02P135809
HGNC:HGNC:17063 HPA:HPA034495 MIM:600118 MIM:602536
neXtProt:NX_Q15042 PharmGKB:PA134969639 InParanoid:Q15042
OrthoDB:EOG495ZR7 PhylomeDB:Q15042 ChiTaRS:RAB3GAP1
GenomeRNAi:22930 NextBio:43655 ArrayExpress:Q15042 Bgee:Q15042
CleanEx:HS_RAB3GAP1 Genevestigator:Q15042
GermOnline:ENSG00000115839 Uniprot:Q15042
Length = 981
Score = 389 (142.0 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 129/429 (30%), Positives = 204/429 (47%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + +G D
Sbjct: 449 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-ASGPPD 507
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPS--PADIKEDGQAVDGSNNLRIPD 506
L CL++QKLQML CIE+ ++ +E + S+ + P D + G + +NL+ D
Sbjct: 508 LRCCLLHQKLQMLNCCIER-KKARDEGKKTSASDVTNIYPGDAGKAGDQLV-PDNLKETD 565
Query: 507 EN---FDRNCDSQLTADGLRESGNAIQRYTMKPQDVASIDKK--PSDFVRRGSAGKV--- 558
+ ++ DS +D E + + KK P + G++
Sbjct: 566 KEKGEVGKSWDSW--SDSEEEFFECLSDTEELKGNGQESGKKGGPKEMANLRPEGRLYQH 623
Query: 559 GSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSDM 615
G + LL + + ++ P TQ+ MTED+ EE+ + S E A+++ LLSDM
Sbjct: 624 GKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDM 683
Query: 616 SAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEH 675
+FKAANP EDF+RW+SP D++ ++ V D K N +G LS RM
Sbjct: 684 ESFKAANPGCSLEDFVRWYSPRDYIEEE-----------VIDEKGNVVLKGELSARMKIP 732
Query: 676 GNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRASADT 734
N+W + W A + A Q+ L D RE EK+LHYL +P DL ++ C A
Sbjct: 733 SNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCVIHAAVLKV 792
Query: 735 LNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLT 794
+ + + + Q+ I+ SS K L N D + E + ++ +VE L+
Sbjct: 793 KEEESLENISSVKKIIKQI-ISHSS--KVLHFPNPE-DKKLEEIIHQIT----NVEALIA 844
Query: 795 VAASLHRKF 803
A SL KF
Sbjct: 845 RARSLKAKF 853
Score = 155 (59.6 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + S VL + + LLS+V+IAL N P FV +H R
Sbjct: 116 HCLVRWYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 175
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 176 MYVG-ECQGPGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFT 233
Query: 224 MKL 226
L
Sbjct: 234 YVL 236
Score = 80 (33.2 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKS-ELKYFMKSYC 83
T AS WERFIS++E + W G+ LEKG + ++ KS E+ + +
Sbjct: 18 TTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIF----TSGTWEEKSDEISFADFKFS 73
Query: 84 MEYYFEIKKSGEFTVWDCTLHDL 106
+ +++ +++S + D L D+
Sbjct: 74 VTHHYLVQESTDKEGKDELLEDV 96
>UNIPROTKB|J9NVN6 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] InterPro:IPR026147 Pfam:PF13890
GO:GO:0005097 GO:GO:0032851 GeneTree:ENSGT00390000006705
PANTHER:PTHR21422 EMBL:AAEX03011910 EMBL:AAEX03011909
Ensembl:ENSCAFT00000043032 Uniprot:J9NVN6
Length = 878
Score = 417 (151.9 bits), Expect = 5.0e-46, Sum P(2) = 5.0e-46
Identities = 136/433 (31%), Positives = 212/433 (48%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + +G D
Sbjct: 349 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-TSGPPD 407
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRIPDE- 507
L CL++QKLQML CIE+ + +E + +++ P D + G + G +NL+ D+
Sbjct: 408 LRCCLLHQKLQMLNCCIERKKARDEGRKT--NTSEIYPGDTGKAGDQL-GPDNLKDMDKE 464
Query: 508 ------NFDRNCDSQ-----LTADGLRESGNAIQRYTMK--PQDVASIDKKPSDFVRRGS 554
++D DS+ +D GN Q K P++VAS+ KP G
Sbjct: 465 KGEIGKSWDSWSDSEEEFFECLSDTEELKGNG-QESGKKGGPKEVASL--KPE-----GR 516
Query: 555 AGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDIL 611
+ G + LL + + ++ P TQ+ MTED+ EE+ + S E A+++ L
Sbjct: 517 LHQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACL 576
Query: 612 LSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQR 671
LSDM +FKAANP EDF+RW+SP D++ ++ V D K N +G LS R
Sbjct: 577 LSDMESFKAANPGCFLEDFVRWYSPRDYIEEE-----------VVDEKGNMVLKGELSAR 625
Query: 672 MSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRA 730
M N+W + W A + A Q+ L D RE EK+LHYL +P DL ++ C A
Sbjct: 626 MKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAVQKPADLARHLLPCVIHAA 685
Query: 731 SADTLNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVE 790
+ + + + + Q+ IT SS K L N D + E + ++ +VE
Sbjct: 686 VLKVKEEENLENISSVKKIIKQI-ITHSS--KVLHFPNPE-DKKLEEIIHQIT----NVE 737
Query: 791 KLLTVAASLHRKF 803
++ A SL KF
Sbjct: 738 AIIARARSLKAKF 750
Score = 149 (57.5 bits), Expect = 5.0e-46, Sum P(2) = 5.0e-46
Identities = 41/123 (33%), Positives = 60/123 (48%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + VL + + LLS+V+IAL N P FV +H R
Sbjct: 16 HCLVRWYGLREFVVIAPAANHDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 75
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 76 MYVG-ECQGHGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFT 133
Query: 224 MKL 226
L
Sbjct: 134 YVL 136
>ZFIN|ZDB-GENE-061027-53 [details] [associations]
symbol:rab3gap1 "RAB3 GTPase activating protein
subunit 1" species:7955 "Danio rerio" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 ZFIN:ZDB-GENE-061027-53
GO:GO:0005737 GO:GO:0005097 GO:GO:0032851 PANTHER:PTHR21422
EMBL:BC068420 IPI:IPI00503950 RefSeq:NP_001071256.2
UniGene:Dr.11461 GeneID:777744 KEGG:dre:777744 CTD:22930
HOGENOM:HOG000253924 HOVERGEN:HBG079116 InParanoid:Q6NUV0
NextBio:20924304 Uniprot:Q6NUV0
Length = 969
Score = 392 (143.0 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 128/469 (27%), Positives = 213/469 (45%)
Query: 343 ENP-GSDNLKSSMVIPSP-TIIDRVLKDLFHEGVQLPDFAKGQHRSSRSIKGARLESLFA 400
E+P +D L S ++ P +D+ Q PD + +K +SL
Sbjct: 400 ESPLNNDVLNSILLYLFPDAALDKADVSEVRPPQQSPDRQSEDYHLYNQLKSCPSDSLTH 459
Query: 401 QF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKL 458
+ C+ + F + +RA+A LW EFV E+R+ WE + + + +G DL CL++QKL
Sbjct: 460 RLALCICMVNFHHGGVRAVAHLWQEFVLEMRYRWENNCLIYGL-ASGPPDLRCCLLHQKL 518
Query: 459 QMLAICIEKMRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRIPDENFDRNCDSQLT 518
QML CIE+ + ++ + + +G +G+ +++D DS+
Sbjct: 519 QMLNCCIERKKARDDGKKSSSSDGARDRSRGAPEGAGPEGAGPAEAAGKSWDSWSDSE-- 576
Query: 519 ADGLRESGNAIQRYTMKPQDVASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDA 578
D E + + MK +D + + S G G+ LL + + ++ P TQ+
Sbjct: 577 -DEFFECVSDTEE--MK-EDKEEAENR-SRSKPEGRLQPHGTHTLLNTQEPLYIPITQEP 631
Query: 579 PLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSDMSAFKAANPDAVFEDFIRWHS 635
MTED+ EE+ + S E A+++ LLSDM +FKAANP DF+RW+S
Sbjct: 632 APMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDMESFKAANPGCTLLDFVRWYS 691
Query: 636 PGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQK 695
P D++ + V D +G LS RM GN+W + W A A A QK
Sbjct: 692 PRDYVEEQ-----------VTDADGRVEVRGELSARMKIPGNMWVEAWETARATPARRQK 740
Query: 696 PLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRASADTLNQTHFGALKQMAMKMDQLY 754
L D +E EK+LHYL +P++L ++ C A + L + + Q+
Sbjct: 741 RLFDDTKEAEKVLHYLALQKPSELTRHLLPCVLHAALLKIKEEESAEDLPSVRSSLQQIS 800
Query: 755 ITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLTVAASLHRKF 803
+ S +L+ + + + + +ED+ + VE ++ A SL KF
Sbjct: 801 SSASKILR-----HPNPEFKKLEDVISQLMA---VEAVIARARSLKAKF 841
Score = 142 (55.0 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L FGV+EF+VI+P + ++ + S LLS+V+IAL+N P FV + R
Sbjct: 116 HCLVRWFGVREFVVISPGANCEAIISESKCSLLLSSVSIALANTGCQVPLFVQIQQKHRK 175
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
F G + G FE + +VP + HL GL ++F +K +RFT
Sbjct: 176 MFSG-ECQGPGVRSDFEMVHL-RRVPSQYNHLSGLLDIFKNKIGCPLTPLPPINISIRFT 233
Query: 224 MKL 226
L
Sbjct: 234 YVL 236
Score = 81 (33.6 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 27 TLASSWERFISEIEAICRQWLADGSK--NLLEKGAIQLDSSKNLYKAKSELKYFMKSYCM 84
T AS WERFIS +E + W GS+ LEKG +S ++ E+ + + +
Sbjct: 18 TTASEWERFISRVEEVLNDWKLIGSRVGKPLEKGEY---TSGTWEESSQEISFADFKFSI 74
Query: 85 EYYFEIKKSGE 95
+++ ++S E
Sbjct: 75 THHYLKQESAE 85
>UNIPROTKB|F1S0D4 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 OMA:LDPIQAP
EMBL:CU466471 EMBL:CU469253 Ensembl:ENSSSCT00000017095
Uniprot:F1S0D4
Length = 868
Score = 413 (150.4 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 136/450 (30%), Positives = 221/450 (49%)
Query: 377 PDFAKGQHRSSRSIKGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEE 434
P ++ K A +SL + CL + F + ++ +A LW EFV E+R+ WE
Sbjct: 319 PSSESEEYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWEN 378
Query: 435 SQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPSPADIKEDGQ 494
+ +P + +G DL CL++QKLQML CIE+ ++ +E + S++ + + G+
Sbjct: 379 NFLIPGL-ASGPPDLRCCLLHQKLQMLNCCIER-KKARDEGRKTSPSDNVTNTYSGDAGK 436
Query: 495 AVD--GSNNLRIPDE-------NFDRNCDSQ-----LTADGLRESGNAIQRYTMK--PQD 538
A D G +NL+ D+ ++D DS+ +D GN Q K P++
Sbjct: 437 AGDQLGPDNLKDMDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNG-QEGGKKGGPKE 495
Query: 539 VASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSN 598
+AS+ KP G + G + LL + + ++ P TQ+ MTED+ EE+ +
Sbjct: 496 MASL--KPE-----GRLYQHGKLRLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGT 548
Query: 599 SFE---FSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAV 655
S E A+++ LLSDM +FKAANP EDF+RW+SP D++ ++ V
Sbjct: 549 SAEGAHLRARMQSACLLSDMESFKAANPGCFLEDFVRWYSPRDYIEEE-----------V 597
Query: 656 EDLKENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLR 715
D K N +G LS RM N+W + W A + A Q+ L D RE EK+LHYL +
Sbjct: 598 IDEKGNMVLKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAVQK 657
Query: 716 PNDLLEQMVCTAFRASADTLNQTHFGALKQMAM--KMDQLYITMSSVLKPLQANNLSGDS 773
P DL ++ A+ + + +L+ ++ K+ + I+ SS K L +N D
Sbjct: 658 PADLARHLLPCVIHAAVLKVKEEEIESLENISSVKKIIKQIISHSS--KVLHFSNPE-DK 714
Query: 774 ETIEDLRRLCVVFEHVEKLLTVAASLHRKF 803
+ E + ++ +VE ++ A SL KF
Sbjct: 715 KLEEIIHQIT----NVEAVIARARSLKAKF 740
Score = 149 (57.5 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 110 FGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIGIQ 169
+G++EF+VIAP + + VL + + LLS+V+IAL N P FV +H R ++G +
Sbjct: 6 YGLREFVVIAPAANNDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVG-E 64
Query: 170 NMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFTMKL 226
G FE + +VP + HL GL ++F SK +RFT L
Sbjct: 65 CQGPGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVL 120
>UNIPROTKB|A6H8Z3 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851 PANTHER:PTHR21422
HOVERGEN:HBG079116 IPI:IPI00555624 UniGene:Hs.306327
HGNC:HGNC:17063 ChiTaRS:RAB3GAP1 EMBL:AC017031 EMBL:AC020602
EMBL:BC146809 STRING:A6H8Z3 Ensembl:ENST00000539493 Uniprot:A6H8Z3
Length = 935
Score = 389 (142.0 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 129/429 (30%), Positives = 204/429 (47%)
Query: 391 KGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSID 448
K A +SL + CL + F + ++ +A LW EFV E+R+ WE + +P + +G D
Sbjct: 405 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL-ASGPPD 463
Query: 449 LSTCLINQKLQMLAICIEKMRELNEEFQDCIGSNDPS--PADIKEDGQAVDGSNNLRIPD 506
L CL++QKLQML CIE+ ++ +E + S+ + P D + G + +NL+ D
Sbjct: 464 LRCCLLHQKLQMLNCCIER-KKARDEGKKTSASDVTNIYPGDAGKAGDQLV-PDNLKETD 521
Query: 507 EN---FDRNCDSQLTADGLRESGNAIQRYTMKPQDVASIDKK--PSDFVRRGSAGKV--- 558
+ ++ DS +D E + + KK P + G++
Sbjct: 522 KEKGEVGKSWDSW--SDSEEEFFECLSDTEELKGNGQESGKKGGPKEMANLRPEGRLYQH 579
Query: 559 GSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFE---FSAQLERDILLSDM 615
G + LL + + ++ P TQ+ MTED+ EE+ + S E A+++ LLSDM
Sbjct: 580 GKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLLSDM 639
Query: 616 SAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLSQRMSEH 675
+FKAANP EDF+RW+SP D++ ++ V D K N +G LS RM
Sbjct: 640 ESFKAANPGCSLEDFVRWYSPRDYIEEE-----------VIDEKGNVVLKGELSARMKIP 688
Query: 676 GNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMV-CTAFRASADT 734
N+W + W A + A Q+ L D RE EK+LHYL +P DL ++ C A
Sbjct: 689 SNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCVIHAAVLKV 748
Query: 735 LNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRLCVVFEHVEKLLT 794
+ + + + Q+ I+ SS K L N D + E + ++ +VE L+
Sbjct: 749 KEEESLENISSVKKIIKQI-ISHSS--KVLHFPNPE-DKKLEEIIHQIT----NVEALIA 800
Query: 795 VAASLHRKF 803
A SL KF
Sbjct: 801 RARSLKAKF 809
Score = 155 (59.6 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 104 HDLQLCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRN 163
H L +G++EF+VIAP + S VL + + LLS+V+IAL N P FV +H R
Sbjct: 72 HCLVRWYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRR 131
Query: 164 AFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFT 223
++G + G FE + +VP + HL GL ++F SK +RFT
Sbjct: 132 MYVG-ECQGPGVRTDFEMVHL-RKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFT 189
Query: 224 MKL 226
L
Sbjct: 190 YVL 192
Score = 40 (19.1 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 903 PRAYQQEIETYRMYICGTSNDLRVALSVTSCD 934
P Y + + RMY T D R+A+ + D
Sbjct: 904 PAPYSKALPQ-RMYSVLTKEDFRLAVKIIDGD 934
>RGD|1306487 [details] [associations]
symbol:RGD1306487 "similar to RAB3 GTPase-activating protein"
species:10116 "Rattus norvegicus" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA;IPI] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 RGD:1306487 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0046982 GO:GO:0060076
GO:GO:0005097 eggNOG:NOG307494 PANTHER:PTHR21422
HOGENOM:HOG000253924 HOVERGEN:HBG079116 OrthoDB:EOG495ZR7
EMBL:AABR03085327 EMBL:AABR03086784 IPI:IPI00371942
UniGene:Rn.92067 IntAct:P69735 STRING:P69735 PhosphoSite:P69735
PRIDE:P69735 InParanoid:P69735 ArrayExpress:P69735
Genevestigator:P69735 GermOnline:ENSRNOG00000003953 Uniprot:P69735
Length = 775
Score = 416 (151.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 141/453 (31%), Positives = 216/453 (47%)
Query: 377 PDFAKGQHRSSRSIKGARLESLFAQF--CLHSLWFGNCNIRAIAVLWIEFVREIRWYWEE 434
P G + K A +SL + CL + F + ++ +A LW EFV E+R+ WE
Sbjct: 228 PAAEAGDYTLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWEN 287
Query: 435 SQPLPKMPVNGSIDLSTCLINQKLQMLAICIE--KMRELNEEFQDCIGSNDPSPADI-KE 491
+ +P + +G DL CL++QKLQML CIE K R+ ++ PAD K
Sbjct: 288 NFLIPGL-ASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSPSDSMTKAYPADAGKA 346
Query: 492 DGQAVDGSNNLRIPDE-------NFDRNCDSQ------LT-ADGLRESGNAIQRYTMK-- 535
GQ G ++LR ++ ++D DS+ L+ A+ LR +G Q T K
Sbjct: 347 GGQL--GLDHLRDTEKEKGEAGKSWDSWSDSEEEFFECLSDAEDLRGNG---QESTKKGG 401
Query: 536 PQDVASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEA 595
P+D+A + KP G + G + LL++ + ++ P TQ+ MTED+ EE+ +
Sbjct: 402 PKDMAPL--KPE-----GRLHQHGKLTLLRNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK 454
Query: 596 FSNSFE---FSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGI 652
S E A+++ LLSDM +FKAANP EDF+RW+SP D++ ++
Sbjct: 455 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEE--------- 505
Query: 653 PAVEDLKENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLE 712
V D K N +G LS RM N+W + W A V A Q+ L D RE EK+LHYL
Sbjct: 506 --VTDEKGNVVLKGELSARMKIPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLHYLA 563
Query: 713 TLRPNDLLEQMV-CTAFRASADTLNQTHFGALKQMAMKMDQLYITMSSVLK-PLQANNLS 770
+P DL ++ C A + + + + Q+ S VL+ P S
Sbjct: 564 MQKPADLARHLLPCVIHAAVLKVKEEESLENIPSVKKIIKQIIAHSSKVLRFP------S 617
Query: 771 GDSETIEDLRRLCVVFEHVEKLLTVAASLHRKF 803
+ + +E++ + VE ++ A SL KF
Sbjct: 618 PEDKKLEEI---ILQITTVEAIIARARSLKAKF 647
>DICTYBASE|DDB_G0292124 [details] [associations]
symbol:DDB_G0292124 "Rab3 GTPase-activating protein
catalytic subunit" species:44689 "Dictyostelium discoideum"
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] InterPro:IPR026147 Pfam:PF13890
dictyBase:DDB_G0292124 EMBL:AAFI02000187 GO:GO:0005097
GO:GO:0032851 eggNOG:NOG307494 PANTHER:PTHR21422 RefSeq:XP_629846.1
EnsemblProtists:DDB0184242 GeneID:8628526 KEGG:ddi:DDB_G0292124
InParanoid:Q54DM6 OMA:YEYEMEN Uniprot:Q54DM6
Length = 1163
Score = 292 (107.8 bits), Expect = 1.9e-34, Sum P(5) = 1.9e-34
Identities = 93/332 (28%), Positives = 165/332 (49%)
Query: 368 DLFHEGVQLPDFAKGQ----HRSSRSIKGARLESLFAQFCLHSLWFGNCNIRAIAVLWIE 423
D++H +P+ Q +++SR IK + ++SLF F + L + + I + W E
Sbjct: 525 DIYHFN-NIPEEELNQSPLPNKNSR-IKRSPIDSLFFSFSIMCLNIQS--LVGILLFWNE 580
Query: 424 FVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEEFQDCIGSND 483
FV EI+W+WE +P+ + I ++ CLI QKLQM+ CI++ +E + FQ N
Sbjct: 581 FVEEIKWHWEHQILIPRTFSSSHISVNNCLIFQKLQMINYCIKRKQEYDHIFQS--NENL 638
Query: 484 PSPADIKEDGQAVDGSNNLR----------IP--DENFDRNC--DSQLTADGLRESGNAI 529
+ + K+ Q+ + +NN + IP D+ +++ D + +GL + N
Sbjct: 639 ENNNNQKQQQQSQNNNNNNQDGWDDDDDDIIPVIDDEKEQDGWDDFEDPLEGLDDDDNNN 698
Query: 530 QRYTMKPQDVASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEER 589
K ++ ++ + G+ K+ LL + + P TQ+ MT+DM +++
Sbjct: 699 NNNNNKKEEEEG-EEIELKYSGGGNIKKLNGQYLLYHDKEIIIPETQEFGPMTDDMVQDQ 757
Query: 590 LHAVEAFSNSFEFSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGP 649
L+ + + S E +++ LLSDM +FK NP +VFEDFIRWHS DW+ P
Sbjct: 758 LNEMSDINISQEKRIEMQTVSLLSDMQSFKYFNPGSVFEDFIRWHSNTDWITK------P 811
Query: 650 SGIPAVEDL----KENWPPQGRLSQRMSEHGN 677
S I ++E K+N + +++ + + N
Sbjct: 812 SEIESIEKRLLQEKQNKQKENQVNNNNNNNNN 843
Score = 181 (68.8 bits), Expect = 2.6e-22, Sum P(5) = 2.6e-22
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 352 SSMVIPSPTIIDRVLKDLFHEGVQ---------LPDFAKGQ----HRSSRSIKGARLESL 398
SS +IP+P +D +L DLF E +P+ Q +++SR IK + ++SL
Sbjct: 499 SSPLIPTPKELDMLLHDLFFETKDPSDIYHFNNIPEEELNQSPLPNKNSR-IKRSPIDSL 557
Query: 399 FAQFCLHSLWFGNCNIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKL 458
F F + L + + I + W EFV EI+W+WE +P+ + I ++ CLI QKL
Sbjct: 558 FFSFSIMCLNIQS--LVGILLFWNEFVEEIKWHWEHQILIPRTFSSSHISVNNCLIFQKL 615
Query: 459 QMLAICIEKMRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNN 501
QM+ CI++ +E + FQ N + + K+ Q+ + +NN
Sbjct: 616 QMINYCIKRKQEYDHIFQS--NENLENNNNQKQQQQSQNNNNN 656
Score = 134 (52.2 bits), Expect = 1.9e-34, Sum P(5) = 1.9e-34
Identities = 44/177 (24%), Positives = 86/177 (48%)
Query: 659 KENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPND 718
K + G LS RM+ + +WRK W ++ + S+QK L D ++ K L+YLE++ P+D
Sbjct: 913 KSGFGRDGCLSLRMAGNHTIWRKTWIKSKPLPISKQKQLFDHTKQAIKSLNYLESVSPSD 972
Query: 719 LLEQM-------VCTAF---RASADTLNQTHFGA-LKQMAMKMDQLYITMSSVLKPLQAN 767
L+ Q+ + T F +A ++ ++ G + + +++ + T++S+ P Q
Sbjct: 973 LVHQIMSVILTSITTIFSNEKAKSNFSSEYCLGIDFQPLKQLVEKFFDTVNSIW-PSQIP 1031
Query: 768 NLSGDSETIEDLRRLCVVFEHVEKLLTVAASLHRKFLQAPRISEAIFSDFYDFYLPK 824
+ +S +D + + +E + SL KF + R+ ++ D Y L K
Sbjct: 1032 HY--ESIKTKDFDPIFKNLQDIENSYSKLISLKTKFSKLDRVIFNLYRDGYSDILDK 1086
Score = 81 (33.6 bits), Expect = 1.9e-34, Sum P(5) = 1.9e-34
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 110 FGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIG 167
FG++E+ ++ +G + + S ++SA +IAL NC+ PAFV + F+G
Sbjct: 137 FGIQEYFLMLAMRDNGP--NVTDLSTIMSAFSIALHNCNCYLPAFVGFDEKRYENFLG 192
Score = 50 (22.7 bits), Expect = 4.4e-09, Sum P(5) = 4.4e-09
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 466 EKMRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRIPDENFDRNCDSQLTADGLRES 525
+K ++N + +N+ + + ED VD +NN D+N D + D D +
Sbjct: 829 QKENQVNNNNNNNNNNNNNNNNNSDEDIVVVDNNNN----DDNDDDDDDDDDDDDDDDDL 884
Query: 526 GNAIQRYTMKPQDVASIDK--KPSDFVRRGSAGKVGSMML 563
I T+ + + IDK + R+ G+ G + L
Sbjct: 885 IKPIIETTLNDELIQIIDKFDESKGIERKSGFGRDGCLSL 924
Score = 48 (22.0 bits), Expect = 1.9e-34, Sum P(5) = 1.9e-34
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 902 TPRAYQQ-EIETYRMYICGTSNDLRVALSVTSCD 934
+PR Y+ ++ ++MY C + + R++ S++ D
Sbjct: 1129 SPRPYKSSQMMPHKMYTCISPYECRISTSISEED 1162
Score = 46 (21.3 bits), Expect = 1.9e-34, Sum P(5) = 1.9e-34
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 27 TLASSWERFISEIEAI 42
T ASSWE I+++E +
Sbjct: 24 TQASSWENLIAKLEEV 39
Score = 37 (18.1 bits), Expect = 7.7e-08, Sum P(5) = 7.7e-08
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 471 LNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRI 504
LN+E I D S ++ G DG +LR+
Sbjct: 893 LNDELIQIIDKFDESKGIERKSGFGRDGCLSLRM 926
>FB|FBgn0051935 [details] [associations]
symbol:CG31935 species:7227 "Drosophila melanogaster"
[GO:0005097 "Rab GTPase activator activity" evidence=ISS]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=ISS] InterPro:IPR026147 Pfam:PF13890 GO:GO:0005737
EMBL:AE014134 GO:GO:0017137 GO:GO:0005097 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 RefSeq:NP_608608.2
UniGene:Dm.33640 PaxDb:Q9VQ26 EnsemblMetazoa:FBtr0077916
GeneID:33338 KEGG:dme:Dmel_CG31935 UCSC:CG31935-RA
FlyBase:FBgn0051935 InParanoid:Q9VQ26 OMA:DNCCTIV OrthoDB:EOG4Q2BX5
PhylomeDB:Q9VQ26 GenomeRNAi:33338 NextBio:783098 Bgee:Q9VQ26
GermOnline:CG31935 Uniprot:Q9VQ26
Length = 916
Score = 241 (89.9 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 64/180 (35%), Positives = 92/180 (51%)
Query: 540 ASIDKKPSDFVRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNS 599
A + KP +RR + +L + + ++ P TQ+ TED ++ +
Sbjct: 573 AVLSLKPEGRLRRLN----NERLLEEPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLGPG 628
Query: 600 FEFSAQLERDILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLK 659
+ Q+ LLSDM AFKAANP + EDFIRW+SP DW +E V D
Sbjct: 629 SGLTTQMMCTSLLSDMEAFKAANPRGIMEDFIRWYSPKDW-----EE--------VTD-- 673
Query: 660 ENWPPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDL 719
E + +LS RM+ GN W+K+W +A AV S QK L D E K+LHYLET + +++
Sbjct: 674 ELGQVKHQLSIRMTTEGNTWQKVWEQAQAVPVSRQKRLFDDTNEALKVLHYLETRKMHEI 733
Score = 132 (51.5 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 59/208 (28%), Positives = 95/208 (45%)
Query: 341 SVENPGSDNLKSSMVIP-SPTIIDRVLKDLF---HEGVQLPDFAKGQHRSS---RSIKGA 393
S E P L + P + + + +L LF H + L +AK IK A
Sbjct: 389 SFELPSQAGLTKRLPGPMTESELSELLAYLFPDMHPEMALFPYAKKNFTDKFDPMRIKSA 448
Query: 394 RLESLFAQF-CLHSLWFGNC-NIRAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLST 451
+SL + CL + + ++ +A +W F R++R W+ S +P + G D T
Sbjct: 449 VPDSLVCRLSCLLATCHAHLGSVEGMAQVWAAFTRQLRLLWDNSLMVPGISA-GFPDTRT 507
Query: 452 CLINQKLQMLAICIEK--MRELNEEFQDCIGSNDPSPADIKEDGQAVDGSNNLRIPDENF 509
CL++QKLQML +C+E+ RE N + + G + ++ +ED +G E F
Sbjct: 508 CLLHQKLQMLNVCVERRVQREANSK-RKSEGMVGKASSEEEEDEDDDEG--------EFF 558
Query: 510 DRNCDSQLTADGLRESGNAIQRYTMKPQ 537
D CD LTA G A+ ++KP+
Sbjct: 559 D--CDD-LTA-GAGSPTKAV--LSLKPE 580
Score = 107 (42.7 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 103 LHDLQLCFGVKEFLVIAPQSAS-GVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPS 161
LH L +G++ F+V+ P + + + E + LSAVA+ + SL P FV ++DP
Sbjct: 121 LHILARIYGLRRFIVLHPVNPTLNYMRSTSEFNFFLSAVAVVSAEVQSLVPIFVQIYDPK 180
Query: 162 RNAFIGIQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSM 215
N + G+ + T F + + P + L GL LF K S +M
Sbjct: 181 WNYYTGVALAPALRTN-FRLIGL-EKAPPECRFLMGLLTLFREKVPTSYTQAAM 232
Score = 44 (20.5 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 255 GESGTRTQWDDDCPWSEWYSAEDLVKGFG 283
G++ + + D+D E++ +DL G G
Sbjct: 540 GKASSEEEEDEDDDEGEFFDCDDLTAGAG 568
Score = 38 (18.4 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 30 SSWERFISEIEAICRQW 46
S WE F +++ I ++W
Sbjct: 19 SDWEVFNAQLGEILQKW 35
>TAIR|locus:2161660 [details] [associations]
symbol:AT5G55060 "AT5G55060" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026147 Pfam:PF13890 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005097 GO:GO:0032851
PANTHER:PTHR21422 EMBL:AK175185 IPI:IPI00530994 RefSeq:NP_200317.2
UniGene:At.29464 PRIDE:Q683D2 EnsemblPlants:AT5G55060.1
GeneID:835597 KEGG:ath:AT5G55060 TAIR:At5g55060
HOGENOM:HOG000030187 InParanoid:Q683D2 OMA:CQVYETV PhylomeDB:Q683D2
ProtClustDB:CLSN2681674 ArrayExpress:Q683D2 Genevestigator:Q683D2
Uniprot:Q683D2
Length = 662
Score = 294 (108.6 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 66/174 (37%), Positives = 99/174 (56%)
Query: 550 VRRGSAGKVGSMMLLKSYQSMHAPFTQDAPLMTEDMHEERLHAVEAFSNSFEFSAQLERD 609
+R G +V ++ +L++ + +++P TQ+ PL+TED+ E E + A +
Sbjct: 359 LRLGVYNQVENLTMLETGEPVYSPITQEGPLLTEDLIRE---TEELVLRTGSMGAGCSQ- 414
Query: 610 ILLSDMSAFKAANPDAVFEDFIRWHSPGDWLNDDGKENGPSGIPAVEDLKENWPPQGRLS 669
LLSDM AFKAANP + EDF+RWHSP DW ++G +G P +G+LS
Sbjct: 415 -LLSDMQAFKAANPGCILEDFVRWHSPPDW-TENGNMSGDDSSPV----------RGQLS 462
Query: 670 QRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQM 723
RM + GNLWR++W A + A +Q PL D + E IL+YLE + +L EQ+
Sbjct: 463 TRMQKEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNYLEDIPAAELFEQL 516
Score = 134 (52.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 663 PPQGRLSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQ 722
P +G+LS RM + GNLWR++W A + A +Q PL D + E IL+YLE + +L EQ
Sbjct: 456 PVRGQLSTRMQKEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNYLEDIPAAELFEQ 515
Query: 723 MVCTAFRASADTLNQTHFGALKQMAMKMDQLYITMSSVLKPLQANNLSGDSETIEDLRRL 782
+ + L F ++ + D L + K G + T + L L
Sbjct: 516 LFTS--------LVSLGFVMVEPVLATNDDLS-KLFFECKDYVVAICQGGAWT-DKLDDL 565
Query: 783 CVVFEHVEKLL 793
C V+E VE +L
Sbjct: 566 CQVYETVETML 576
Score = 119 (46.9 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 415 RAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKLQMLAICI-EKMRELN- 472
R +A+ W V E+R +W E + +P +P++ + DL +CL++Q LQ++ C+ K R +
Sbjct: 261 RRMALFWCRVVEELRRFWNEEKHIPWIPLDNNPDLKSCLLHQWLQVINCCLARKARNVAA 320
Query: 473 EEFQDCIGSNDPSPADIKEDGQAVDGS 499
E D + S A+ K D GS
Sbjct: 321 SEALDAV-MRQASSANEKSDVSESMGS 346
>WB|WBGene00004317 [details] [associations]
symbol:rbg-1 species:6239 "Caenorhabditis elegans"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005737 GO:GO:0017137
GO:GO:0005097 EMBL:Z78542 PIR:T21147 RefSeq:NP_510490.1
ProteinModelPortal:Q93538 PaxDb:Q93538 EnsemblMetazoa:F20D1.6.1
EnsemblMetazoa:F20D1.6.2 GeneID:181595 KEGG:cel:CELE_F20D1.6
UCSC:F20D1.6.1 CTD:181595 WormBase:F20D1.6 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 HOGENOM:HOG000018297 InParanoid:Q93538
OMA:ADFLRWH NextBio:914590 PANTHER:PTHR21422 Uniprot:Q93538
Length = 915
Score = 151 (58.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 570 MHAPFTQDAPLMTEDMHEERLHAVEAFSNSFEFSAQLERDILLSDMSAFKAANPDAVFED 629
M+ P TQDA +T++M + R + FS E L+ +++ SDM +FKAAN AVF D
Sbjct: 590 MYIPVTQDACPLTDEMIDARNEHL--FSLDEEDRVHLQMELVKSDMQSFKAANAGAVFAD 647
Query: 630 FIRWHSPGDWLNDDGKEN 647
F+RWHSP D+ D K N
Sbjct: 648 FLRWHSPKDY---DEKTN 662
Score = 97 (39.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 415 RAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEE 474
RA LW+EF+ ++R +E+ + + K+ NG ID C +QK+QML +CI+ ++ +
Sbjct: 484 RAEPQLWVEFLLKLREKYEKMETVEKV-YNG-IDHLQCSFSQKMQMLQLCIDARQKRHRM 541
Query: 475 FQDCIGSND 483
+N+
Sbjct: 542 LDSAHSANN 550
Score = 83 (34.3 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 32/152 (21%), Positives = 63/152 (41%)
Query: 668 LSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMVCTA 727
+S+RM N+W + W A + + Q + + + E+IL + + E M T
Sbjct: 664 ISERMLISNNVWVRSWEAALPIPVANQARIFNDTKIAEEILEIFNNATLDQVREWMKPTV 723
Query: 728 FRASADTLNQ--THFGALKQ-MAMKMDQLYITMSSVLK--PLQANNLSGDSETIEDLRRL 782
F A+ + L + + +G ++ + I ++ L P+ N +S IE + +
Sbjct: 724 FAATLERLTEIESSYGVSEEKQKQRTKTAKILANATLNNTPMDYNEISKYCSQIEMIHNM 783
Query: 783 CVVFEHVEKLLTVAAS-LHRKFLQAPRISEAI 813
V H+ +L A +H + + AI
Sbjct: 784 KV---HLMQLFENAREKMHPPYPSETDVQSAI 812
Score = 78 (32.5 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 31/138 (22%), Positives = 56/138 (40%)
Query: 108 LCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIG 167
L FG++E ++I+P +SG D + + ++ + L + P F + D S + G
Sbjct: 125 LKFGIRECIIISPNDSSGTFTDENQVNTVMGNIKTILHSSRCEVPVFCYIKDQSLDMISG 184
Query: 168 IQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFTMKLT 227
+ G T F + + + + + L LF S F H +VR + + T
Sbjct: 185 YASDGNS-TYNFSSV-VLRNINRRHCSMTDLLYLFKEHLGASISAF--HE-EVRMSSRFT 239
Query: 228 YKTLPYXXXXXMRGEDVE 245
+ +P R VE
Sbjct: 240 H-VVPLKQSKYFRNHTVE 256
>UNIPROTKB|Q93538 [details] [associations]
symbol:rbg-1 "Rab3 GTPase-activating protein catalytic
subunit" species:6239 "Caenorhabditis elegans" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=ISS]
[GO:0043087 "regulation of GTPase activity" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0005097 "Rab
GTPase activator activity" evidence=ISS] InterPro:IPR026147
Pfam:PF13890 GO:GO:0005737 GO:GO:0017137 GO:GO:0005097 EMBL:Z78542
PIR:T21147 RefSeq:NP_510490.1 ProteinModelPortal:Q93538
PaxDb:Q93538 EnsemblMetazoa:F20D1.6.1 EnsemblMetazoa:F20D1.6.2
GeneID:181595 KEGG:cel:CELE_F20D1.6 UCSC:F20D1.6.1 CTD:181595
WormBase:F20D1.6 eggNOG:NOG307494 GeneTree:ENSGT00390000006705
HOGENOM:HOG000018297 InParanoid:Q93538 OMA:ADFLRWH NextBio:914590
PANTHER:PTHR21422 Uniprot:Q93538
Length = 915
Score = 151 (58.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 570 MHAPFTQDAPLMTEDMHEERLHAVEAFSNSFEFSAQLERDILLSDMSAFKAANPDAVFED 629
M+ P TQDA +T++M + R + FS E L+ +++ SDM +FKAAN AVF D
Sbjct: 590 MYIPVTQDACPLTDEMIDARNEHL--FSLDEEDRVHLQMELVKSDMQSFKAANAGAVFAD 647
Query: 630 FIRWHSPGDWLNDDGKEN 647
F+RWHSP D+ D K N
Sbjct: 648 FLRWHSPKDY---DEKTN 662
Score = 97 (39.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 415 RAIAVLWIEFVREIRWYWEESQPLPKMPVNGSIDLSTCLINQKLQMLAICIEKMRELNEE 474
RA LW+EF+ ++R +E+ + + K+ NG ID C +QK+QML +CI+ ++ +
Sbjct: 484 RAEPQLWVEFLLKLREKYEKMETVEKV-YNG-IDHLQCSFSQKMQMLQLCIDARQKRHRM 541
Query: 475 FQDCIGSND 483
+N+
Sbjct: 542 LDSAHSANN 550
Score = 83 (34.3 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 32/152 (21%), Positives = 63/152 (41%)
Query: 668 LSQRMSEHGNLWRKIWNEAPAVSASEQKPLLDPNREGEKILHYLETLRPNDLLEQMVCTA 727
+S+RM N+W + W A + + Q + + + E+IL + + E M T
Sbjct: 664 ISERMLISNNVWVRSWEAALPIPVANQARIFNDTKIAEEILEIFNNATLDQVREWMKPTV 723
Query: 728 FRASADTLNQ--THFGALKQ-MAMKMDQLYITMSSVLK--PLQANNLSGDSETIEDLRRL 782
F A+ + L + + +G ++ + I ++ L P+ N +S IE + +
Sbjct: 724 FAATLERLTEIESSYGVSEEKQKQRTKTAKILANATLNNTPMDYNEISKYCSQIEMIHNM 783
Query: 783 CVVFEHVEKLLTVAAS-LHRKFLQAPRISEAI 813
V H+ +L A +H + + AI
Sbjct: 784 KV---HLMQLFENAREKMHPPYPSETDVQSAI 812
Score = 78 (32.5 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 31/138 (22%), Positives = 56/138 (40%)
Query: 108 LCFGVKEFLVIAPQSASGVVLDAPEASKLLSAVAIALSNCSSLWPAFVPVHDPSRNAFIG 167
L FG++E ++I+P +SG D + + ++ + L + P F + D S + G
Sbjct: 125 LKFGIRECIIISPNDSSGTFTDENQVNTVMGNIKTILHSSRCEVPVFCYIKDQSLDMISG 184
Query: 168 IQNMGTIFTRRFEADRICSQVPVKLMHLEGLYELFVSKFAYSTLDFSMHVFKVRFTMKLT 227
+ G T F + + + + + L LF S F H +VR + + T
Sbjct: 185 YASDGNS-TYNFSSV-VLRNINRRHCSMTDLLYLFKEHLGASISAF--HE-EVRMSSRFT 239
Query: 228 YKTLPYXXXXXMRGEDVE 245
+ +P R VE
Sbjct: 240 H-VVPLKQSKYFRNHTVE 256
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 934 914 0.00090 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 637 (68 KB)
Total size of DFA: 498 KB (2229 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.08u 0.09s 77.17t Elapsed: 00:00:06
Total cpu time: 77.09u 0.09s 77.18t Elapsed: 00:00:06
Start: Thu May 9 16:07:51 2013 End: Thu May 9 16:07:57 2013