Query 038754
Match_columns 79
No_of_seqs 112 out of 2338
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 04:15:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gyz_A Chaperone protein IPGC; 99.7 3.4E-16 1.2E-20 84.4 9.2 70 1-70 51-120 (151)
2 4gco_A Protein STI-1; structur 99.7 1.1E-15 3.8E-20 79.9 10.0 69 1-69 28-96 (126)
3 4ga2_A E3 SUMO-protein ligase 99.7 2.2E-15 7.6E-20 80.6 10.1 70 1-70 46-115 (150)
4 4gco_A Protein STI-1; structur 99.7 2E-15 6.7E-20 78.9 8.9 64 1-64 62-125 (126)
5 1hxi_A PEX5, peroxisome target 99.6 9.1E-15 3.1E-19 75.8 10.2 70 1-70 32-101 (121)
6 3upv_A Heat shock protein STI1 99.6 2.1E-14 7.2E-19 74.1 10.0 69 1-69 19-87 (126)
7 2vgx_A Chaperone SYCD; alterna 99.6 1.6E-14 5.5E-19 77.2 9.5 69 1-69 36-104 (148)
8 2xcb_A PCRH, regulatory protei 99.6 2.2E-14 7.4E-19 75.8 9.5 69 1-69 33-101 (142)
9 2l6j_A TPR repeat-containing p 99.6 9.6E-14 3.3E-18 69.7 11.2 71 1-71 19-95 (111)
10 4gcn_A Protein STI-1; structur 99.6 4.8E-15 1.7E-19 77.4 6.0 67 1-67 23-96 (127)
11 1na3_A Designed protein CTPR2; 99.6 8.4E-14 2.9E-18 67.8 10.1 67 1-67 24-90 (91)
12 3sz7_A HSC70 cochaperone (SGT) 99.6 8.2E-14 2.8E-18 74.8 10.1 69 1-69 26-94 (164)
13 3urz_A Uncharacterized protein 99.5 1.3E-13 4.5E-18 76.8 10.0 68 1-68 69-136 (208)
14 2hr2_A Hypothetical protein; a 99.5 9.9E-14 3.4E-18 75.5 8.7 70 1-70 26-118 (159)
15 1zu2_A Mitochondrial import re 99.5 6.9E-14 2.4E-18 76.0 8.0 63 2-64 62-135 (158)
16 2kc7_A BFR218_protein; tetratr 99.5 3.5E-13 1.2E-17 66.9 9.4 67 1-67 15-84 (99)
17 3q49_B STIP1 homology and U bo 99.5 4.2E-13 1.4E-17 69.7 10.0 69 1-69 24-92 (137)
18 3rkv_A Putative peptidylprolyl 99.5 3.2E-13 1.1E-17 72.4 9.7 70 1-70 78-148 (162)
19 4ga2_A E3 SUMO-protein ligase 99.5 8.4E-14 2.9E-18 74.4 7.0 69 1-69 80-149 (150)
20 3k9i_A BH0479 protein; putativ 99.5 2.6E-14 9E-19 73.3 4.8 67 2-68 6-75 (117)
21 2pl2_A Hypothetical conserved 99.5 7.1E-13 2.4E-17 74.3 10.1 67 1-67 20-86 (217)
22 1zu2_A Mitochondrial import re 99.5 2.4E-13 8.2E-18 73.9 7.8 68 2-69 18-95 (158)
23 3urz_A Uncharacterized protein 99.5 2.8E-13 9.6E-18 75.5 8.0 70 1-70 19-104 (208)
24 2kat_A Uncharacterized protein 99.5 6.2E-13 2.1E-17 67.7 8.3 67 3-69 2-68 (115)
25 2vgx_A Chaperone SYCD; alterna 99.5 4E-13 1.4E-17 71.7 7.8 63 1-63 70-132 (148)
26 3rkv_A Putative peptidylprolyl 99.5 3.8E-13 1.3E-17 72.1 7.8 69 1-69 26-112 (162)
27 4gyw_A UDP-N-acetylglucosamine 99.5 6.4E-13 2.2E-17 85.8 10.0 69 1-69 24-92 (723)
28 3upv_A Heat shock protein STI1 99.5 8.2E-13 2.8E-17 68.1 8.4 66 1-66 53-124 (126)
29 3gyz_A Chaperone protein IPGC; 99.5 7.8E-13 2.7E-17 71.2 8.5 54 1-54 85-138 (151)
30 2kck_A TPR repeat; tetratricop 99.4 2.1E-12 7.2E-17 64.4 9.2 67 1-67 21-89 (112)
31 2h6f_A Protein farnesyltransfe 99.4 6.6E-13 2.3E-17 80.4 8.4 67 2-68 148-214 (382)
32 3vtx_A MAMA; tetratricopeptide 99.4 2.6E-12 9E-17 69.6 10.0 69 1-69 88-156 (184)
33 2vyi_A SGTA protein; chaperone 99.4 4.5E-12 1.5E-16 64.5 10.4 67 2-68 62-128 (131)
34 4gyw_A UDP-N-acetylglucosamine 99.4 1.3E-12 4.3E-17 84.4 10.0 67 2-68 93-159 (723)
35 2pl2_A Hypothetical conserved 99.4 1E-12 3.5E-17 73.6 8.5 69 1-69 54-133 (217)
36 1elw_A TPR1-domain of HOP; HOP 99.4 4.1E-12 1.4E-16 63.7 9.9 69 1-69 19-87 (118)
37 1p5q_A FKBP52, FK506-binding p 99.4 2.7E-12 9.1E-17 76.2 10.1 70 1-70 211-280 (336)
38 2xev_A YBGF; tetratricopeptide 99.4 3.7E-12 1.3E-16 65.4 9.4 68 1-68 17-90 (129)
39 2fbn_A 70 kDa peptidylprolyl i 99.4 4E-12 1.4E-16 70.0 10.0 71 1-71 103-173 (198)
40 2xcb_A PCRH, regulatory protei 99.4 8.8E-13 3E-17 69.5 7.0 60 1-60 67-126 (142)
41 2lni_A Stress-induced-phosphop 99.4 3E-12 1E-16 65.6 8.7 67 2-68 32-98 (133)
42 3ma5_A Tetratricopeptide repea 99.4 3.4E-12 1.1E-16 64.0 8.5 71 1-71 22-94 (100)
43 3k9i_A BH0479 protein; putativ 99.4 4.5E-12 1.5E-16 64.8 8.8 60 1-60 42-101 (117)
44 2h6f_A Protein farnesyltransfe 99.4 4.2E-12 1.4E-16 76.9 10.0 70 1-70 112-182 (382)
45 3sz7_A HSC70 cochaperone (SGT) 99.4 2.1E-12 7.3E-17 69.3 7.8 67 1-67 60-128 (164)
46 3vtx_A MAMA; tetratricopeptide 99.4 7.5E-12 2.6E-16 67.8 10.1 68 1-68 20-87 (184)
47 2lni_A Stress-induced-phosphop 99.4 4.1E-12 1.4E-16 65.1 8.5 68 1-68 65-132 (133)
48 2c2l_A CHIP, carboxy terminus 99.4 5.8E-12 2E-16 73.1 10.1 69 1-69 19-87 (281)
49 1elw_A TPR1-domain of HOP; HOP 99.4 1.5E-11 5E-16 61.7 10.1 64 1-64 53-116 (118)
50 2vyi_A SGTA protein; chaperone 99.4 1.3E-11 4.5E-16 62.8 10.0 69 1-69 27-95 (131)
51 2hr2_A Hypothetical protein; a 99.4 2E-13 6.7E-18 74.3 3.3 60 1-60 72-142 (159)
52 3mkr_A Coatomer subunit epsilo 99.4 4.8E-12 1.7E-16 73.9 9.4 69 1-69 181-249 (291)
53 1a17_A Serine/threonine protei 99.4 1.1E-11 3.8E-16 65.7 10.1 65 2-66 29-93 (166)
54 1na0_A Designed protein CTPR3; 99.4 1.9E-11 6.4E-16 61.7 10.1 65 2-66 25-89 (125)
55 4i17_A Hypothetical protein; T 99.4 1.1E-11 3.8E-16 69.2 9.5 68 1-68 22-90 (228)
56 1p5q_A FKBP52, FK506-binding p 99.4 1.2E-11 4E-16 73.5 10.0 69 1-69 162-245 (336)
57 2dba_A Smooth muscle cell asso 99.4 1.4E-11 4.8E-16 64.2 9.2 66 2-67 44-112 (148)
58 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 7.3E-12 2.5E-16 77.0 9.1 69 1-69 332-400 (457)
59 2dba_A Smooth muscle cell asso 99.4 1.8E-11 6E-16 63.8 9.5 64 1-64 80-143 (148)
60 2fbn_A 70 kDa peptidylprolyl i 99.3 1.9E-11 6.5E-16 67.3 9.6 69 1-69 53-137 (198)
61 1ihg_A Cyclophilin 40; ppiase 99.3 1.9E-11 6.4E-16 73.7 10.1 69 1-69 288-356 (370)
62 2xev_A YBGF; tetratricopeptide 99.3 3.4E-11 1.2E-15 61.7 9.7 64 1-64 54-120 (129)
63 4i17_A Hypothetical protein; T 99.3 1.9E-11 6.4E-16 68.3 9.2 67 1-67 57-130 (228)
64 2kat_A Uncharacterized protein 99.3 2E-11 6.7E-16 62.0 8.6 69 1-69 34-104 (115)
65 1na0_A Designed protein CTPR3; 99.3 4.9E-11 1.7E-15 60.1 10.0 67 1-67 58-124 (125)
66 1wao_1 Serine/threonine protei 99.3 2.5E-11 8.7E-16 75.1 10.3 69 1-69 21-89 (477)
67 1hxi_A PEX5, peroxisome target 99.3 5E-12 1.7E-16 65.4 5.9 54 1-54 66-119 (121)
68 1a17_A Serine/threonine protei 99.3 5.5E-11 1.9E-15 62.9 10.2 63 1-63 62-124 (166)
69 1xnf_A Lipoprotein NLPI; TPR, 99.3 3E-11 1E-15 68.4 9.6 69 1-69 58-126 (275)
70 2pzi_A Probable serine/threoni 99.3 1.6E-11 5.4E-16 78.6 8.9 72 1-72 448-519 (681)
71 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 2.7E-11 9.1E-16 74.5 9.4 69 1-69 283-366 (457)
72 1hh8_A P67PHOX, NCF-2, neutrop 99.3 4.4E-11 1.5E-15 65.9 9.5 69 1-69 52-136 (213)
73 4eqf_A PEX5-related protein; a 99.3 4.8E-11 1.6E-15 70.3 10.2 69 1-69 228-296 (365)
74 3uq3_A Heat shock protein STI1 99.3 5.9E-11 2E-15 66.4 10.0 69 1-69 154-222 (258)
75 1elr_A TPR2A-domain of HOP; HO 99.3 2.3E-11 7.9E-16 61.9 7.7 69 1-69 19-94 (131)
76 4eqf_A PEX5-related protein; a 99.3 5.3E-11 1.8E-15 70.1 10.0 69 1-69 80-148 (365)
77 2r5s_A Uncharacterized protein 99.3 6.3E-11 2.1E-15 64.3 9.5 67 4-70 92-160 (176)
78 3q49_B STIP1 homology and U bo 99.3 1.5E-11 5.1E-16 63.7 6.6 67 1-67 58-129 (137)
79 3bee_A Putative YFRE protein; 99.3 4.1E-11 1.4E-15 59.9 7.8 53 2-54 25-77 (93)
80 3ieg_A DNAJ homolog subfamily 99.3 9.3E-11 3.2E-15 68.1 10.5 69 1-69 287-355 (359)
81 2e2e_A Formate-dependent nitri 99.3 4.8E-11 1.6E-15 64.4 8.7 59 3-61 61-122 (177)
82 4abn_A Tetratricopeptide repea 99.3 3.8E-11 1.3E-15 74.0 8.9 68 2-69 237-307 (474)
83 2e2e_A Formate-dependent nitri 99.3 1.9E-11 6.5E-16 66.0 6.3 68 2-69 26-94 (177)
84 3fp2_A TPR repeat-containing p 99.2 4.1E-11 1.4E-15 73.2 8.1 69 1-69 40-108 (537)
85 3ma5_A Tetratricopeptide repea 99.2 4.5E-11 1.5E-15 59.8 6.9 55 15-69 2-56 (100)
86 3ieg_A DNAJ homolog subfamily 99.2 1.6E-10 5.5E-15 67.1 10.0 69 1-69 18-86 (359)
87 1fch_A Peroxisomal targeting s 99.2 1.8E-10 6.2E-15 67.6 10.2 69 1-69 232-300 (368)
88 2vsy_A XCC0866; transferase, g 99.2 1.3E-10 4.6E-15 72.5 10.0 66 2-67 39-104 (568)
89 2if4_A ATFKBP42; FKBP-like, al 99.2 1.8E-11 6.2E-16 72.7 5.8 65 1-65 245-309 (338)
90 1fch_A Peroxisomal targeting s 99.2 1.7E-10 5.9E-15 67.6 9.9 69 1-69 79-147 (368)
91 2v5f_A Prolyl 4-hydroxylase su 99.2 3E-10 1E-14 57.4 9.6 61 1-61 20-87 (104)
92 1pc2_A Mitochondria fission pr 99.2 9.7E-11 3.3E-15 63.3 8.0 65 2-66 51-117 (152)
93 1ihg_A Cyclophilin 40; ppiase 99.2 5.4E-11 1.8E-15 71.7 7.6 69 1-69 238-322 (370)
94 3as5_A MAMA; tetratricopeptide 99.2 3.3E-10 1.1E-14 60.4 10.0 66 2-67 92-157 (186)
95 1w3b_A UDP-N-acetylglucosamine 99.2 8.4E-11 2.9E-15 69.8 8.2 67 2-68 287-353 (388)
96 2fo7_A Synthetic consensus TPR 99.2 3E-10 1E-14 57.7 9.2 64 2-65 51-114 (136)
97 1wao_1 Serine/threonine protei 99.2 1.1E-10 3.8E-15 72.2 8.8 63 1-63 55-117 (477)
98 3qou_A Protein YBBN; thioredox 99.2 1.3E-10 4.6E-15 67.5 8.6 68 3-70 202-271 (287)
99 3hym_B Cell division cycle pro 99.2 7.4E-11 2.5E-15 68.1 7.3 70 1-70 251-321 (330)
100 2if4_A ATFKBP42; FKBP-like, al 99.2 4.7E-11 1.6E-15 71.0 6.6 69 1-69 194-279 (338)
101 1elr_A TPR2A-domain of HOP; HO 99.2 1.9E-10 6.6E-15 58.4 8.1 68 1-69 53-127 (131)
102 2fo7_A Synthetic consensus TPR 99.2 4.9E-10 1.7E-14 56.8 9.5 69 1-69 16-84 (136)
103 3qky_A Outer membrane assembly 99.2 2.3E-10 8E-15 65.1 9.1 66 1-66 30-101 (261)
104 3as5_A MAMA; tetratricopeptide 99.2 4.8E-10 1.7E-14 59.8 9.9 68 1-68 57-124 (186)
105 1w3b_A UDP-N-acetylglucosamine 99.2 3.7E-10 1.3E-14 67.1 10.1 68 2-69 49-116 (388)
106 2vq2_A PILW, putative fimbrial 99.2 4.1E-10 1.4E-14 61.8 9.6 67 1-67 23-89 (225)
107 2vsy_A XCC0866; transferase, g 99.2 3.7E-10 1.3E-14 70.5 10.1 67 1-67 72-138 (568)
108 2y4t_A DNAJ homolog subfamily 99.2 5.1E-10 1.7E-14 67.2 10.3 69 1-69 310-378 (450)
109 4abn_A Tetratricopeptide repea 99.2 9.1E-11 3.1E-15 72.3 7.2 69 1-69 194-273 (474)
110 2y4t_A DNAJ homolog subfamily 99.2 4.8E-10 1.6E-14 67.4 10.0 69 1-69 41-109 (450)
111 2q7f_A YRRB protein; TPR, prot 99.2 7.7E-10 2.6E-14 61.5 10.2 62 3-64 108-169 (243)
112 2pzi_A Probable serine/threoni 99.2 5.2E-11 1.8E-15 76.2 5.7 68 1-69 482-549 (681)
113 3u4t_A TPR repeat-containing p 99.2 2.6E-10 8.9E-15 64.6 8.0 61 1-61 89-149 (272)
114 3cv0_A Peroxisome targeting si 99.2 7.7E-10 2.6E-14 63.7 10.0 68 1-68 187-254 (327)
115 2q7f_A YRRB protein; TPR, prot 99.2 9E-10 3.1E-14 61.3 9.9 68 1-68 72-139 (243)
116 2gw1_A Mitochondrial precursor 99.2 5.7E-10 1.9E-14 67.7 9.7 68 1-69 21-88 (514)
117 3cv0_A Peroxisome targeting si 99.1 8.8E-10 3E-14 63.5 10.0 69 1-69 36-104 (327)
118 2ho1_A Type 4 fimbrial biogene 99.1 5.7E-10 2E-14 62.6 8.8 66 2-67 53-118 (252)
119 2yhc_A BAMD, UPF0169 lipoprote 99.1 6.6E-10 2.3E-14 62.3 8.6 66 1-66 19-90 (225)
120 3hym_B Cell division cycle pro 99.1 9.6E-10 3.3E-14 63.4 9.3 66 2-67 72-138 (330)
121 3uq3_A Heat shock protein STI1 99.1 4E-10 1.4E-14 63.0 7.2 63 1-63 188-256 (258)
122 3mkr_A Coatomer subunit epsilo 99.1 8.4E-10 2.9E-14 64.4 8.6 60 1-60 215-275 (291)
123 2ho1_A Type 4 fimbrial biogene 99.1 2.5E-09 8.5E-14 60.0 10.3 67 2-68 157-223 (252)
124 2ond_A Cleavage stimulation fa 99.1 1.4E-09 4.8E-14 63.4 9.5 67 2-68 80-148 (308)
125 2xpi_A Anaphase-promoting comp 99.1 7.4E-10 2.5E-14 68.6 8.7 65 1-65 531-595 (597)
126 2vq2_A PILW, putative fimbrial 99.1 1.7E-09 5.8E-14 59.3 9.3 61 3-63 94-156 (225)
127 1xnf_A Lipoprotein NLPI; TPR, 99.1 1.7E-09 5.9E-14 61.1 9.4 58 1-58 92-149 (275)
128 1hh8_A P67PHOX, NCF-2, neutrop 99.1 1E-09 3.4E-14 60.4 7.8 66 1-69 21-86 (213)
129 2kck_A TPR repeat; tetratricop 99.1 4.7E-10 1.6E-14 55.6 5.9 54 1-54 55-111 (112)
130 3qou_A Protein YBBN; thioredox 99.1 8.8E-10 3E-14 64.0 7.6 54 1-54 132-185 (287)
131 2r5s_A Uncharacterized protein 99.1 1.6E-10 5.4E-15 62.7 4.1 59 1-60 21-79 (176)
132 3qky_A Outer membrane assembly 99.1 1.5E-09 5.1E-14 61.7 8.1 70 1-70 112-201 (261)
133 3fp2_A TPR repeat-containing p 99.0 2.5E-09 8.6E-14 65.4 8.9 65 2-66 292-356 (537)
134 4gcn_A Protein STI-1; structur 99.0 2.3E-09 7.9E-14 55.6 7.2 51 19-69 7-57 (127)
135 4g1t_A Interferon-induced prot 99.0 4.1E-09 1.4E-13 63.8 9.3 65 2-66 229-293 (472)
136 3u4t_A TPR repeat-containing p 99.0 2.2E-09 7.6E-14 60.7 7.5 66 2-68 53-122 (272)
137 2yhc_A BAMD, UPF0169 lipoprote 99.0 4.1E-09 1.4E-13 59.1 7.9 69 2-70 112-200 (225)
138 2c2l_A CHIP, carboxy terminus 99.0 9.6E-10 3.3E-14 63.8 4.9 54 1-54 53-106 (281)
139 2xpi_A Anaphase-promoting comp 99.0 8.4E-09 2.9E-13 63.9 9.4 60 3-62 390-449 (597)
140 1qqe_A Vesicular transport pro 98.9 4.4E-09 1.5E-13 61.1 7.1 68 1-68 133-213 (292)
141 2ond_A Cleavage stimulation fa 98.9 1.2E-08 4E-13 59.5 8.6 67 3-69 33-114 (308)
142 2gw1_A Mitochondrial precursor 98.9 1.1E-08 3.6E-13 62.2 7.8 63 2-64 431-493 (514)
143 4g1t_A Interferon-induced prot 98.9 5.5E-09 1.9E-13 63.2 6.2 67 2-68 154-223 (472)
144 3edt_B KLC 2, kinesin light ch 98.8 6.7E-09 2.3E-13 58.5 5.4 69 1-69 100-184 (283)
145 1dce_A Protein (RAB geranylger 98.8 4.3E-08 1.5E-12 62.1 9.3 67 2-68 89-157 (567)
146 1nzn_A CGI-135 protein, fissio 98.8 2.8E-08 9.5E-13 52.1 6.8 64 3-66 55-120 (126)
147 2l6j_A TPR repeat-containing p 98.8 2.2E-08 7.6E-13 49.7 6.2 51 19-69 3-53 (111)
148 1qqe_A Vesicular transport pro 98.8 1.2E-08 4.1E-13 59.2 5.9 69 1-69 92-173 (292)
149 1y8m_A FIS1; mitochondria, unk 98.8 1.6E-07 5.5E-12 50.1 9.0 71 2-72 58-132 (144)
150 1na3_A Designed protein CTPR2; 98.8 3.8E-08 1.3E-12 47.3 6.2 52 18-69 7-58 (91)
151 3dra_A Protein farnesyltransfe 98.8 9.1E-08 3.1E-12 56.7 8.8 66 2-67 85-157 (306)
152 4a1s_A PINS, partner of inscut 98.7 4.1E-08 1.4E-12 58.4 7.0 69 1-69 63-141 (411)
153 3rjv_A Putative SEL1 repeat pr 98.7 6.1E-08 2.1E-12 54.0 7.2 65 1-66 104-174 (212)
154 3dra_A Protein farnesyltransfe 98.7 1.1E-07 3.6E-12 56.4 8.4 68 2-69 126-195 (306)
155 1dce_A Protein (RAB geranylger 98.7 8.4E-08 2.9E-12 60.8 8.4 66 3-68 46-121 (567)
156 2ooe_A Cleavage stimulation fa 98.7 1.6E-07 5.5E-12 58.2 9.4 66 3-68 303-370 (530)
157 3dss_A Geranylgeranyl transfer 98.7 2.7E-07 9.3E-12 55.3 9.9 64 3-66 91-156 (331)
158 3dss_A Geranylgeranyl transfer 98.7 3.2E-07 1.1E-11 55.0 10.1 66 2-67 126-192 (331)
159 3q7a_A Farnesyltransferase alp 98.7 2.2E-07 7.5E-12 56.0 9.5 65 3-67 71-136 (349)
160 3o48_A Mitochondria fission 1 98.7 1.4E-07 4.7E-12 49.8 7.5 59 2-60 59-118 (134)
161 1ouv_A Conserved hypothetical 98.7 3E-07 1E-11 52.3 9.5 61 2-66 22-86 (273)
162 3edt_B KLC 2, kinesin light ch 98.7 2.8E-08 9.7E-13 55.9 4.9 69 1-69 58-142 (283)
163 3q7a_A Farnesyltransferase alp 98.7 4.2E-07 1.5E-11 54.8 10.0 70 2-71 105-176 (349)
164 2qfc_A PLCR protein; TPR, HTH, 98.7 1.6E-07 5.6E-12 54.3 8.0 69 1-69 170-251 (293)
165 3ro2_A PINS homolog, G-protein 98.7 1.1E-07 3.8E-12 54.4 7.2 68 1-68 20-97 (338)
166 3ulq_A Response regulator aspa 98.7 6.6E-08 2.3E-12 57.5 6.3 69 1-69 199-279 (383)
167 2qfc_A PLCR protein; TPR, HTH, 98.7 5.3E-07 1.8E-11 52.1 9.9 69 1-69 130-211 (293)
168 3bee_A Putative YFRE protein; 98.7 2E-07 6.7E-12 46.4 7.0 54 16-69 2-58 (93)
169 3u64_A Protein TP_0956; tetrat 98.6 1.9E-07 6.5E-12 55.2 7.6 64 2-65 179-250 (301)
170 3u3w_A Transcriptional activat 98.6 4.1E-08 1.4E-12 56.8 4.8 68 1-68 170-250 (293)
171 3sf4_A G-protein-signaling mod 98.6 1.5E-07 5.1E-12 55.5 7.2 68 1-68 24-101 (406)
172 3nf1_A KLC 1, kinesin light ch 98.6 1E-07 3.5E-12 54.4 5.8 49 1-49 168-224 (311)
173 2ifu_A Gamma-SNAP; membrane fu 98.6 1.1E-07 3.6E-12 55.6 5.9 52 1-52 130-187 (307)
174 1ouv_A Conserved hypothetical 98.6 8.2E-07 2.8E-11 50.5 9.4 60 2-65 58-121 (273)
175 4f3v_A ESX-1 secretion system 98.6 3.7E-07 1.3E-11 53.6 7.9 59 1-60 186-247 (282)
176 3nf1_A KLC 1, kinesin light ch 98.6 8.1E-08 2.8E-12 54.9 4.8 69 1-69 126-210 (311)
177 2ooe_A Cleavage stimulation fa 98.6 1.1E-06 3.6E-11 54.5 10.0 60 1-61 27-86 (530)
178 3ly7_A Transcriptional activat 98.6 5.3E-07 1.8E-11 54.8 8.3 53 1-54 292-344 (372)
179 3rjv_A Putative SEL1 repeat pr 98.6 2.5E-07 8.5E-12 51.5 6.5 64 1-66 68-137 (212)
180 3u3w_A Transcriptional activat 98.5 2.7E-07 9.3E-12 53.4 6.0 69 1-69 130-211 (293)
181 3gw4_A Uncharacterized protein 98.5 2E-07 6.8E-12 50.6 5.1 69 1-69 41-122 (203)
182 3qww_A SET and MYND domain-con 98.5 6.4E-07 2.2E-11 55.3 7.9 70 1-70 313-398 (433)
183 3q15_A PSP28, response regulat 98.5 2.4E-07 8.1E-12 55.2 5.6 68 1-68 197-275 (378)
184 3ro3_A PINS homolog, G-protein 98.5 2.3E-07 7.9E-12 48.1 4.6 51 1-51 24-80 (164)
185 3qww_A SET and MYND domain-con 98.5 7.2E-07 2.5E-11 55.1 7.4 59 1-59 355-426 (433)
186 1klx_A Cysteine rich protein B 98.5 4.6E-06 1.6E-10 43.7 9.6 61 2-66 41-105 (138)
187 4a1s_A PINS, partner of inscut 98.5 2.1E-07 7.3E-12 55.3 4.6 69 1-69 101-181 (411)
188 3ro3_A PINS homolog, G-protein 98.5 6.4E-07 2.2E-11 46.4 6.0 69 1-69 64-144 (164)
189 3sf4_A G-protein-signaling mod 98.5 1.9E-07 6.4E-12 55.1 4.3 52 2-53 203-260 (406)
190 3ulq_A Response regulator aspa 98.5 2.1E-07 7E-12 55.4 4.4 69 1-69 118-199 (383)
191 3n71_A Histone lysine methyltr 98.4 1.7E-06 5.9E-11 54.1 7.9 69 1-69 324-408 (490)
192 1klx_A Cysteine rich protein B 98.4 3.1E-06 1.1E-10 44.4 7.8 56 1-60 76-135 (138)
193 2ifu_A Gamma-SNAP; membrane fu 98.4 3.4E-07 1.2E-11 53.4 4.4 67 1-68 91-169 (307)
194 3q15_A PSP28, response regulat 98.4 8.7E-07 3E-11 52.7 6.2 52 1-52 237-293 (378)
195 2kc7_A BFR218_protein; tetratr 98.4 2.1E-06 7E-11 41.9 6.3 47 23-69 3-50 (99)
196 3qwp_A SET and MYND domain-con 98.4 2.3E-06 8E-11 52.7 7.4 59 1-59 344-415 (429)
197 3n71_A Histone lysine methyltr 98.4 2.4E-06 8.4E-11 53.4 7.4 58 1-58 366-436 (490)
198 3ro2_A PINS homolog, G-protein 98.3 5.1E-07 1.7E-11 51.7 3.7 50 2-51 199-254 (338)
199 4f3v_A ESX-1 secretion system 98.3 3.3E-06 1.1E-10 49.7 6.3 70 1-70 150-224 (282)
200 3qwp_A SET and MYND domain-con 98.2 6.1E-06 2.1E-10 50.8 7.5 69 1-69 302-386 (429)
201 3gw4_A Uncharacterized protein 98.2 5.6E-06 1.9E-10 44.7 6.4 69 1-69 7-81 (203)
202 2xm6_A Protein corresponding t 98.2 6.7E-06 2.3E-10 50.5 7.0 47 2-50 383-433 (490)
203 3e4b_A ALGK; tetratricopeptide 98.2 1.3E-05 4.5E-10 49.2 8.0 59 2-66 267-330 (452)
204 1hz4_A MALT regulatory protein 98.2 1.6E-05 5.5E-10 46.9 7.8 68 1-68 108-188 (373)
205 2xm6_A Protein corresponding t 98.2 2.7E-05 9.2E-10 47.9 8.9 61 2-66 347-411 (490)
206 3u64_A Protein TP_0956; tetrat 98.1 4.1E-06 1.4E-10 49.6 4.9 53 1-53 219-273 (301)
207 3e4b_A ALGK; tetratricopeptide 98.1 9.3E-06 3.2E-10 49.9 6.5 58 3-63 196-257 (452)
208 3ly7_A Transcriptional activat 98.1 5.8E-05 2E-09 46.0 9.6 67 2-69 215-325 (372)
209 1pc2_A Mitochondria fission pr 98.0 3.4E-05 1.2E-09 41.6 6.4 65 2-66 14-83 (152)
210 3mv2_B Coatomer subunit epsilo 98.0 2.8E-05 9.5E-10 46.3 6.6 58 1-60 226-293 (310)
211 1hz4_A MALT regulatory protein 98.0 1.1E-05 3.8E-10 47.6 4.6 48 2-49 69-122 (373)
212 2v5f_A Prolyl 4-hydroxylase su 97.9 8E-05 2.7E-09 37.2 6.6 51 19-69 4-61 (104)
213 3mv2_B Coatomer subunit epsilo 97.7 0.00036 1.2E-08 41.6 8.3 51 1-51 115-167 (310)
214 1ya0_A SMG-7 transcript varian 97.7 0.00049 1.7E-08 43.4 8.9 66 2-67 168-233 (497)
215 1zbp_A Hypothetical protein VP 97.7 0.00088 3E-08 39.3 9.0 63 1-63 12-74 (273)
216 4h7y_A Dual specificity protei 97.6 0.0018 6.2E-08 35.1 8.9 62 1-62 75-136 (161)
217 2uy1_A Cleavage stimulation fa 97.6 0.00071 2.4E-08 42.3 8.4 57 4-61 197-253 (493)
218 4e6h_A MRNA 3'-END-processing 97.5 0.00062 2.1E-08 44.3 7.9 64 5-68 328-392 (679)
219 4b4t_Q 26S proteasome regulato 97.5 9.9E-05 3.4E-09 44.2 4.0 53 1-53 19-88 (434)
220 4gns_B Protein CSD3, chitin bi 97.4 0.00078 2.7E-08 44.4 6.9 46 1-46 352-397 (754)
221 1xi4_A Clathrin heavy chain; a 97.4 0.00096 3.3E-08 47.0 7.5 29 18-46 1103-1131(1630)
222 3ffl_A Anaphase-promoting comp 97.4 0.00029 9.8E-09 38.6 4.0 48 2-49 36-92 (167)
223 4e6h_A MRNA 3'-END-processing 97.3 0.0012 4.1E-08 43.0 7.3 51 2-52 486-536 (679)
224 1b89_A Protein (clathrin heavy 97.3 0.00063 2.2E-08 42.4 5.4 55 1-68 137-191 (449)
225 1b89_A Protein (clathrin heavy 97.3 0.0051 1.7E-07 38.5 9.3 41 26-66 213-253 (449)
226 4b4t_Q 26S proteasome regulato 97.3 0.00052 1.8E-08 41.0 4.7 51 1-51 150-206 (434)
227 1xi4_A Clathrin heavy chain; a 97.1 0.0023 7.7E-08 45.2 7.1 48 1-53 1120-1167(1630)
228 1nzn_A CGI-135 protein, fissio 96.4 0.032 1.1E-06 29.2 6.7 48 3-50 18-68 (126)
229 2ff4_A Probable regulatory pro 96.2 0.028 9.7E-07 34.2 6.8 48 1-48 186-233 (388)
230 3ffl_A Anaphase-promoting comp 96.1 0.028 9.7E-07 30.7 5.8 45 1-45 78-147 (167)
231 4gns_B Protein CSD3, chitin bi 95.6 0.06 2E-06 35.8 6.8 49 21-69 338-386 (754)
232 2uy1_A Cleavage stimulation fa 95.4 0.2 6.9E-06 31.3 8.5 52 3-55 303-355 (493)
233 3mkq_B Coatomer subunit alpha; 95.3 0.1 3.6E-06 28.7 6.2 43 2-49 21-63 (177)
234 1ya0_A SMG-7 transcript varian 95.0 0.096 3.3E-06 33.2 6.1 47 22-68 154-200 (497)
235 2w2u_A Hypothetical P60 katani 95.0 0.057 1.9E-06 26.1 4.0 23 27-49 26-48 (83)
236 2v6y_A AAA family ATPase, P60 94.9 0.061 2.1E-06 25.9 4.0 19 30-48 21-39 (83)
237 3ax2_A Mitochondrial import re 94.6 0.15 5.2E-06 24.1 5.4 40 24-63 21-60 (73)
238 2cfu_A SDSA1; SDS-hydrolase, l 94.6 0.27 9.3E-06 32.1 7.5 53 20-72 449-501 (658)
239 1wy6_A Hypothetical protein ST 94.4 0.29 9.9E-06 26.4 6.4 44 7-50 112-155 (172)
240 2ff4_A Probable regulatory pro 93.8 0.64 2.2E-05 28.3 9.5 48 22-69 173-220 (388)
241 1wfd_A Hypothetical protein 15 93.3 0.2 6.8E-06 24.6 4.0 19 30-48 25-43 (93)
242 4h7y_A Dual specificity protei 93.1 0.2 6.9E-06 27.2 4.2 39 14-52 7-51 (161)
243 2crb_A Nuclear receptor bindin 92.9 0.33 1.1E-05 24.1 4.4 28 20-47 15-42 (97)
244 3mkq_A Coatomer beta'-subunit; 92.5 0.27 9.3E-06 31.7 4.9 30 17-46 678-707 (814)
245 3kae_A CDC27, possible protein 92.5 0.79 2.7E-05 25.7 7.2 57 1-57 77-151 (242)
246 2cpt_A SKD1 protein, vacuolar 92.3 0.26 8.9E-06 25.3 3.9 19 30-48 28-46 (117)
247 2v6x_A Vacuolar protein sortin 92.2 0.34 1.2E-05 23.2 4.0 22 28-49 21-42 (85)
248 4a5x_A MITD1, MIT domain-conta 92.0 0.32 1.1E-05 23.6 3.8 24 26-49 22-45 (86)
249 1om2_A Protein (mitochondrial 91.8 0.31 1.1E-05 24.2 3.6 32 24-55 24-55 (95)
250 2dl1_A Spartin; SPG20, MIT, st 91.4 0.43 1.5E-05 24.5 4.0 18 30-47 32-49 (116)
251 4gq2_M Nucleoporin NUP120; bet 90.5 0.49 1.7E-05 32.2 4.7 40 9-48 829-868 (950)
252 4g26_A Pentatricopeptide repea 89.5 2.7 9.1E-05 26.5 10.2 28 20-47 140-167 (501)
253 4b4t_S RPN3, 26S proteasome re 88.7 1 3.5E-05 28.9 4.8 51 2-54 247-304 (523)
254 4g26_A Pentatricopeptide repea 88.6 3.2 0.00011 26.1 9.9 65 2-67 86-153 (501)
255 4fhn_B Nucleoporin NUP120; pro 88.5 0.97 3.3E-05 31.3 5.0 38 10-47 832-869 (1139)
256 3o48_A Mitochondria fission 1 88.1 1.4 4.8E-05 23.2 4.5 29 1-29 93-121 (134)
257 3t5x_A PCI domain-containing p 86.8 2 6.8E-05 23.9 4.9 35 20-54 14-48 (203)
258 3eab_A Spastin; spastin, MIT, 85.5 0.58 2E-05 22.9 2.0 14 34-47 33-46 (89)
259 4a1g_A Mitotic checkpoint seri 85.2 3 0.0001 22.4 5.1 50 5-54 84-135 (152)
260 3re2_A Predicted protein; meni 84.8 3.4 0.00012 25.8 5.4 44 5-48 276-324 (472)
261 2wpv_A GET4, UPF0363 protein Y 84.3 3.1 0.00011 24.9 5.1 26 18-43 132-157 (312)
262 2yhe_A SEC-alkyl sulfatase; hy 84.1 0.22 7.5E-06 32.7 0.0 52 21-72 462-513 (668)
263 3lpz_A GET4 (YOR164C homolog); 81.6 6 0.0002 24.0 5.6 40 4-43 120-159 (336)
264 3u84_A Menin; MLL, JUND, ledgf 80.8 5.8 0.0002 25.3 5.4 44 5-48 298-346 (550)
265 4gq4_A Menin; tumor suppressor 80.2 6.2 0.00021 25.0 5.4 44 5-48 283-331 (489)
266 2npm_A 14-3-3 domain containin 78.5 7.9 0.00027 22.7 6.9 46 3-48 173-226 (260)
267 2rpa_A Katanin P60 ATPase-cont 77.9 4.3 0.00015 19.3 5.6 43 24-66 16-64 (78)
268 3efz_A 14-3-3 protein; 14-3-3, 77.8 7.4 0.00025 22.9 5.0 47 3-49 169-226 (268)
269 2br9_A 14-3-3E, 14-3-3 protein 77.1 8.3 0.00028 22.2 7.0 46 3-48 147-201 (234)
270 1qsa_A Protein (soluble lytic 75.7 7.2 0.00025 25.5 5.0 47 2-48 301-347 (618)
271 2ymb_A MITD1, MIT domain-conta 75.6 0.57 1.9E-05 27.4 0.0 25 25-49 28-52 (257)
272 3lew_A SUSD-like carbohydrate 74.5 13 0.00046 23.3 7.2 46 4-49 176-232 (495)
273 3umh_A Amyloid beta A4 protein 74.2 9.8 0.00034 21.6 4.8 52 3-54 102-155 (211)
274 3myv_A SUSD superfamily protei 74.0 13 0.00045 23.0 7.3 46 3-48 165-218 (454)
275 3kez_A Putative sugar binding 73.4 14 0.00047 23.0 7.0 46 3-48 171-224 (461)
276 3bqo_A Telomeric repeat-bindin 72.4 4.4 0.00015 22.9 3.1 38 26-63 123-160 (211)
277 1o9d_A 14-3-3-like protein C; 71.6 13 0.00044 21.8 7.0 46 3-48 152-206 (260)
278 3mcx_A SUSD superfamily protei 71.1 16 0.00055 22.8 6.9 47 3-49 177-231 (477)
279 3uzd_A 14-3-3 protein gamma; s 69.0 15 0.0005 21.4 7.0 46 3-48 148-202 (248)
280 4gof_A Small glutamine-rich te 67.8 4.8 0.00016 17.6 2.1 19 36-54 30-48 (52)
281 3pmr_A Amyloid-like protein 1; 67.3 15 0.00052 21.0 6.1 52 3-54 109-162 (219)
282 2zan_A Vacuolar protein sortin 67.1 1.1 3.9E-05 27.7 0.0 18 32-49 23-40 (444)
283 3ubw_A 14-3-3E, 14-3-3 protein 65.5 18 0.00062 21.2 7.0 46 3-48 173-227 (261)
284 4abx_A DNA repair protein RECN 64.8 9.1 0.00031 20.7 3.3 49 4-52 74-122 (175)
285 4b4t_R RPN7, 26S proteasome re 63.4 23 0.00079 21.8 5.3 48 2-49 147-197 (429)
286 1y8m_A FIS1; mitochondria, unk 62.8 15 0.00053 19.5 9.4 38 17-54 36-76 (144)
287 3snx_A SUSD homolog, putative 62.7 16 0.00054 22.8 4.5 31 19-49 190-220 (460)
288 2cfu_A SDSA1; SDS-hydrolase, l 62.2 15 0.00053 24.1 4.5 36 1-36 464-499 (658)
289 2ca5_A MXIH; transport protein 61.0 13 0.00044 18.0 3.6 23 38-60 28-50 (85)
290 3jq1_A SUSD superfamily protei 60.2 29 0.00099 21.8 6.0 46 3-48 155-208 (481)
291 4b4t_R RPN7, 26S proteasome re 59.0 2.5 8.5E-05 26.1 0.4 31 20-50 131-161 (429)
292 2lxb_A Small glutamine-rich te 58.6 9.4 0.00032 18.0 2.3 19 36-54 35-53 (74)
293 3hdx_A SUSD homolog, SUSD supe 58.3 31 0.0011 21.5 6.5 30 20-49 197-226 (478)
294 3t5v_B Nuclear mRNA export pro 57.2 34 0.0012 21.6 5.9 34 20-53 220-254 (455)
295 1zbp_A Hypothetical protein VP 55.9 29 0.001 20.5 5.2 36 29-64 6-41 (273)
296 1qsa_A Protein (soluble lytic 55.3 42 0.0014 22.1 7.1 66 3-69 269-334 (618)
297 3txn_A 26S proteasome regulato 55.3 17 0.00059 22.4 3.7 24 25-48 104-127 (394)
298 3esl_A Checkpoint serine/threo 54.8 27 0.00091 19.7 9.7 51 4-54 97-149 (202)
299 3iqu_A 14-3-3 protein sigma; s 53.2 31 0.001 19.9 6.5 46 3-48 150-204 (236)
300 2rkl_A Vacuolar protein sortin 53.1 15 0.0005 16.2 3.4 29 21-49 21-49 (53)
301 3spa_A Mtrpol, DNA-directed RN 50.1 68 0.0023 23.0 10.0 65 1-66 142-212 (1134)
302 3qnk_A Putative lipoprotein; a 49.8 46 0.0016 21.0 7.3 46 4-49 155-211 (517)
303 2ijq_A Hypothetical protein; s 48.9 31 0.001 18.7 6.4 47 2-48 48-103 (161)
304 2o8p_A 14-3-3 domain containin 47.4 39 0.0013 19.4 5.0 47 3-49 142-197 (227)
305 3r9m_A BRO1 domain-containing 46.6 43 0.0015 20.4 4.4 30 20-49 253-282 (376)
306 3txn_A 26S proteasome regulato 46.5 50 0.0017 20.4 6.7 50 1-50 114-169 (394)
307 2g0u_A Type III secretion syst 46.4 26 0.0009 17.2 5.2 8 47-54 43-50 (92)
308 3kez_A Putative sugar binding 46.0 45 0.0015 20.7 4.5 29 20-48 338-366 (461)
309 3l22_A SUSD superfamily protei 45.4 15 0.00052 22.7 2.4 30 18-47 199-228 (441)
310 3kae_A CDC27, possible protein 45.3 40 0.0014 19.0 7.5 30 18-47 60-89 (242)
311 3mkq_A Coatomer beta'-subunit; 45.1 60 0.0021 21.0 6.7 20 28-47 744-763 (814)
312 4asv_A Small glutamine-rich te 44.8 11 0.00038 18.5 1.4 20 36-55 47-66 (92)
313 3s6n_M SurviVal motor neuron p 44.6 17 0.00058 14.5 2.1 28 19-50 5-32 (37)
314 3k66_A Beta-amyloid-like prote 44.5 45 0.0015 19.3 5.7 52 3-54 104-159 (239)
315 3bu8_A Telomeric repeat-bindin 42.6 48 0.0016 19.1 8.7 63 3-65 89-159 (235)
316 3i4g_A SUSD-like carbohydrate 41.7 66 0.0023 20.5 6.4 30 20-49 198-227 (528)
317 2wvi_A Mitotic checkpoint seri 41.4 42 0.0014 18.1 8.6 49 6-54 80-130 (164)
318 2e2a_A Protein (enzyme IIA); h 41.0 35 0.0012 17.1 3.9 30 19-48 19-48 (105)
319 4aez_C MAD3, mitotic spindle c 40.8 51 0.0017 18.9 8.5 49 6-54 134-184 (223)
320 3otn_A SUSD superfamily protei 40.4 55 0.0019 20.5 4.3 45 5-49 164-226 (482)
321 3hdx_A SUSD homolog, SUSD supe 40.0 66 0.0023 20.1 4.6 30 20-49 364-393 (478)
322 2xze_A STAM-binding protein; h 39.9 42 0.0014 17.7 4.2 30 20-49 40-69 (146)
323 1ixm_A SPO0B, protein (sporula 39.8 47 0.0016 18.2 4.2 42 7-48 19-60 (192)
324 1wcr_A PTS system, N, N'-diace 39.6 37 0.0013 16.9 3.9 30 19-48 17-46 (103)
325 3c3r_A Programmed cell death 6 39.5 64 0.0022 19.7 4.4 28 21-48 276-303 (380)
326 3rau_A Tyrosine-protein phosph 36.3 72 0.0025 19.4 4.5 28 21-48 253-280 (363)
327 1u6l_A Hypothetical protein; s 36.2 30 0.001 17.7 2.3 16 34-49 13-28 (149)
328 3jq1_A SUSD superfamily protei 35.8 70 0.0024 20.1 4.3 30 20-49 361-390 (481)
329 3k1s_A PTS system, cellobiose- 35.8 45 0.0015 16.8 3.9 30 19-48 21-50 (109)
330 3l8r_A PTCA, putative PTS syst 34.6 50 0.0017 17.0 3.9 30 19-48 36-65 (120)
331 1tsj_A Conserved hypothetical 32.6 30 0.001 17.7 2.0 14 34-47 14-27 (139)
332 2vkj_A TM1634; membrane protei 32.1 50 0.0017 16.3 6.7 34 20-54 53-86 (106)
333 1zb1_A BRO1 protein; AIP1, BRO 30.9 61 0.0021 19.8 3.4 28 21-48 258-285 (392)
334 3mv2_A Coatomer subunit alpha; 29.8 97 0.0033 18.8 8.0 30 28-57 215-244 (325)
335 3spa_A Mtrpol, DNA-directed RN 29.2 1.6E+02 0.0056 21.3 7.2 54 1-54 180-237 (1134)
336 3o10_A Sacsin; all-helical dom 29.0 66 0.0022 16.6 4.1 10 3-12 7-16 (141)
337 2cr7_A Paired amphipathic heli 27.9 54 0.0019 15.3 3.4 30 2-31 10-39 (80)
338 1u7i_A Hypothetical protein; s 27.8 40 0.0014 16.8 1.9 13 35-47 17-29 (136)
339 2xs1_A Programmed cell death 6 27.7 1.2E+02 0.004 20.3 4.4 28 21-48 261-288 (704)
340 3nqp_A SUSD superfamily protei 27.0 1.2E+02 0.0042 19.1 4.3 29 20-48 383-411 (514)
341 4b4t_P 26S proteasome regulato 24.5 1.3E+02 0.0045 18.6 7.2 49 1-49 192-247 (445)
342 2yhe_A SEC-alkyl sulfatase; hy 29.7 16 0.00056 24.1 0.0 37 2-38 477-513 (668)
343 1u69_A Hypothetical protein; s 23.4 53 0.0018 17.6 2.0 14 34-47 15-28 (163)
344 2oo2_A Hypothetical protein AF 23.0 75 0.0026 15.3 3.9 24 20-43 35-58 (86)
345 2pmr_A Uncharacterized protein 22.8 76 0.0026 15.3 3.9 24 20-43 39-62 (87)
346 2cp9_A EF-TS, EF-TSMT, elongat 22.4 68 0.0023 14.5 2.0 14 32-45 34-47 (64)
347 3oms_A PHNB protein; structura 21.4 34 0.0012 17.5 0.9 15 34-48 19-33 (138)
348 3iv0_A SUSD homolog; NP_809186 21.2 1.2E+02 0.0042 18.9 3.5 30 20-49 368-398 (481)
349 3jys_A SUSD superfamily protei 21.0 1.7E+02 0.0057 18.5 6.3 45 4-48 163-222 (499)
350 3qtm_A Uncharacterized protein 20.9 1.5E+02 0.0051 17.9 4.1 29 3-31 102-130 (346)
351 2ynq_A ESSB; membrane protein, 20.7 1.2E+02 0.0039 16.5 3.6 20 24-43 77-96 (161)
352 4b4t_O 26S proteasome regulato 20.3 1.6E+02 0.0054 18.0 5.8 29 20-48 127-155 (393)
No 1
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.69 E-value=3.4e-16 Score=84.41 Aligned_cols=70 Identities=17% Similarity=0.096 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 70 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++.+++.++...|+.
T Consensus 51 ~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 51 RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCH
Confidence 5789999999999999999999999999999999999999999999999999999999999999887753
No 2
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.68 E-value=1.1e-15 Score=79.88 Aligned_cols=69 Identities=16% Similarity=0.056 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+|++|+..|+++++++|.++.+|+++|.+|..+|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 28 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 96 (126)
T 4gco_A 28 DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE 96 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC
Confidence 478888888888888888888888888888888888888888888888888888888888888877654
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.66 E-value=2.2e-15 Score=80.58 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 70 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..++.++...++.
T Consensus 46 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 46 EYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 5889999999999999999999999999999999999999999999999999999999999998877653
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.65 E-value=2e-15 Score=78.92 Aligned_cols=64 Identities=19% Similarity=0.231 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..++.++
T Consensus 62 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 62 EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999999998888764
No 5
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.63 E-value=9.1e-15 Score=75.84 Aligned_cols=70 Identities=19% Similarity=0.146 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 70 (79)
++++|+..|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|+++.++..++.++...|+.
T Consensus 32 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~ 101 (121)
T 1hxi_A 32 NLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNA 101 (121)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 4789999999999999999999999999999999999999999999999999999999998888877653
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.1e-14 Score=74.11 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 87 (126)
T 3upv_A 19 DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 87 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999999999999999999999999998888888877654
No 7
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.60 E-value=1.6e-14 Score=77.18 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+|+++|.++..+|++++|+.+|++++.++|+++.++..++.++...|+
T Consensus 36 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 104 (148)
T 2vgx_A 36 XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGE 104 (148)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCC
Confidence 578899999999999999999999999999999999999999999999999999888888888877665
No 8
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.60 E-value=2.2e-14 Score=75.77 Aligned_cols=69 Identities=10% Similarity=0.098 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+|+.+|.++..+|++++|+.+|++++.++|+++.++..++.++...|+
T Consensus 33 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 33 KWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGD 101 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999999999999999999999999888888888877665
No 9
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.59 E-value=9.6e-14 Score=69.72 Aligned_cols=71 Identities=21% Similarity=0.297 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC------HHHHHHHHHHHHHhhhcC
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD------QFCTEMLSLALVDEGRHG 71 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~ 71 (79)
++++|+..|+++++++|+++.+++++|.++..+|++++|+..|++++.++|++ ..++..++.++...|...
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 19 LYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQ 95 (111)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHh
Confidence 57899999999999999999999999999999999999999999999999999 777888888888877543
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.58 E-value=4.8e-15 Score=77.40 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH-------HHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF-------CTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~~l~~~~~~~ 67 (79)
+|++|+.+|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|++.. ++..++.++...
T Consensus 23 ~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~ 96 (127)
T 4gcn_A 23 DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQ 96 (127)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999999999999999999999987652 344455554443
No 11
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.58 E-value=8.4e-14 Score=67.81 Aligned_cols=67 Identities=33% Similarity=0.478 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++++|+.+|+++++.+|.++.+++.+|.++...|++++|+.+|++++.++|+++.++..++.++...
T Consensus 24 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999999999988887654
No 12
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.56 E-value=8.2e-14 Score=74.84 Aligned_cols=69 Identities=22% Similarity=0.174 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..++.++...++
T Consensus 26 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 94 (164)
T 3sz7_A 26 EYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMAD 94 (164)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC
Confidence 477888888888888888888888888888888888888888888888888888888888877776554
No 13
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.3e-13 Score=76.81 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+..|+++++++|+++.+++++|.++..+|++++|+.+|+++++++|+++.++..++.++...+
T Consensus 69 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 69 NYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999988888765443
No 14
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.53 E-value=9.9e-14 Score=75.50 Aligned_cols=70 Identities=29% Similarity=0.246 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHhhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHcc-------CCCCHHHH----
Q 038754 1 IYHEAISCYERALTLLNR-------SLS-----TYAGLAYTYHLQDNFSAAITYYHKALWL-------KPDDQFCT---- 57 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~---- 57 (79)
+|++|+..|+++++++|+ +.. +|+++|.++..+|++++|+.+|++++.+ +|++..++
T Consensus 26 ~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~ 105 (159)
T 2hr2_A 26 EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAV 105 (159)
T ss_dssp CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHH
Confidence 589999999999999999 544 9999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhhhc
Q 038754 58 EMLSLALVDEGRH 70 (79)
Q Consensus 58 ~~l~~~~~~~~~~ 70 (79)
.+.+.++...++.
T Consensus 106 ~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 106 YSRALALDGLGRG 118 (159)
T ss_dssp HHHHHHHHHTTCH
T ss_pred HhHHHHHHHCCCH
Confidence 9999988877653
No 15
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.53 E-value=6.9e-14 Score=76.05 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQD-----------NFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
+++|+..|+++++++|+++.+|+++|.+|..+| ++++|+.+|++|++++|++...+..+..+-
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 569999999999999999999999999999885 899999999999999999997776665443
No 16
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.52 E-value=3.5e-13 Score=66.89 Aligned_cols=67 Identities=19% Similarity=0.193 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHH--HHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLS-TYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCT--EMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~--~~l~~~~~~~ 67 (79)
++++|+..|+++++.+|+++. +++.+|.+|..+|++++|+.+|+++++++|+++.++ ..+..++...
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~~~ 84 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILNFY 84 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 578999999999999999999 999999999999999999999999999999998777 6666666543
No 17
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.52 E-value=4.2e-13 Score=69.65 Aligned_cols=69 Identities=23% Similarity=0.224 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.+++++|.++..+|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 92 (137)
T 3q49_B 24 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 92 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhh
Confidence 578999999999999999999999999999999999999999999999999999888888888877654
No 18
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.51 E-value=3.2e-13 Score=72.40 Aligned_cols=70 Identities=11% Similarity=-0.022 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH-HHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ-FCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~l~~~~~~~~~~ 70 (79)
++++|+..++++++++|+++.+|+.+|.+|..+|++++|+.+|++++.++|+++ .+...+..+.......
T Consensus 78 ~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 78 DLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999998 6677777766655443
No 19
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.51 E-value=8.4e-14 Score=74.39 Aligned_cols=69 Identities=20% Similarity=0.204 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITY-YHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~-~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++.+|... ++++++++|+++.++...+.++...|+
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 578999999999999999999999999999999999887765 599999999999999888888776554
No 20
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.50 E-value=2.6e-14 Score=73.28 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTL---LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|++++++ +|+++.+++++|.+|..+|++++|+.+|+++++++|+++.++..++.++...|
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 75 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG 75 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC
Confidence 34555555555555 35555555555555555566655655565555555555555555555554443
No 21
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.49 E-value=7.1e-13 Score=74.27 Aligned_cols=67 Identities=22% Similarity=0.060 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++++|+..|+++++.+|+++.+++++|.++..+|++++|+..|+++++++|+++.++..++.++...
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 20 RYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999999999999999999999999999998888776
No 22
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.49 E-value=2.4e-13 Score=73.91 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNF----------SAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|+++++++|++..++..++.++...|.
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~ 95 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAF 95 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999875 599999999999999999999999999987653
No 23
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=2.8e-13 Score=75.50 Aligned_cols=70 Identities=23% Similarity=0.339 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAG----------------LAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+.+|+++++.+|+++.+++. +|.+|..+|++++|+..|+++++++|+++.++..++.++
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 98 (208)
T 3urz_A 19 QNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQ 98 (208)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 5789999999999999999999999 999999999999999999999999999999999999998
Q ss_pred HHhhhc
Q 038754 65 VDEGRH 70 (79)
Q Consensus 65 ~~~~~~ 70 (79)
...|+.
T Consensus 99 ~~~g~~ 104 (208)
T 3urz_A 99 VCRGQE 104 (208)
T ss_dssp HHHTCH
T ss_pred HHcCCH
Confidence 877653
No 24
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.47 E-value=6.2e-13 Score=67.70 Aligned_cols=67 Identities=21% Similarity=0.203 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
.+|+..|+++++.+|+++.+++.+|.+|...|++++|+.+|++++.++|++..++..++.++...|+
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 68 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGD 68 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCC
Confidence 3578888888899998889999999999999999999999999999999888888888887776654
No 25
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.47 E-value=4e-13 Score=71.72 Aligned_cols=63 Identities=14% Similarity=-0.051 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|+++........+
T Consensus 70 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 132 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRV 132 (148)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHH
Confidence 578999999999999999999999999999999999999999999999999887554443333
No 26
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.47 E-value=3.8e-13 Score=72.09 Aligned_cols=69 Identities=20% Similarity=0.185 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHhh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHH
Q 038754 1 IYHEAISCYERALTL------------------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSL 62 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 62 (79)
+|++|+..|++++++ +|.++.+++++|.+|..+|++++|+..+++++.++|+++.++..++.
T Consensus 26 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 105 (162)
T 3rkv_A 26 DYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAK 105 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 578999999999999 77778999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 038754 63 ALVDEGR 69 (79)
Q Consensus 63 ~~~~~~~ 69 (79)
++...|+
T Consensus 106 ~~~~~g~ 112 (162)
T 3rkv_A 106 ARIAAWK 112 (162)
T ss_dssp HHHHTTC
T ss_pred HHHHHhc
Confidence 8887765
No 27
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.47 E-value=6.4e-13 Score=85.79 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|++..++.+++.++...|+
T Consensus 24 ~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~ 92 (723)
T 4gyw_A 24 NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 92 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 355666666666666666666666666666666666666666666666666666666666666555443
No 28
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.46 E-value=8.2e-13 Score=68.06 Aligned_cols=66 Identities=14% Similarity=0.072 Sum_probs=61.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC------CCCHHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLK------PDDQFCTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~ 66 (79)
++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++ |+++.++..+..+...
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 53 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999 9999888888777654
No 29
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.46 E-value=7.8e-13 Score=71.20 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|++++++.|+++
T Consensus 85 ~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 85 QFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 588999999999999999999999999999999999999999999999999876
No 30
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.45 E-value=2.1e-12 Score=64.36 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC--CHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD--DQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++.+|.++.+++.+|.++..+|++++|+.+|+++++++|+ +..++..++.++...
T Consensus 21 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 21 NYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI 89 (112)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999 998888888887765
No 31
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.44 E-value=6.6e-13 Score=80.40 Aligned_cols=67 Identities=6% Similarity=0.030 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|+++++++|+++.+|+++|.++..+|++++|+.+|++++.++|++..++.+++.++...|
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g 214 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFK 214 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcC
Confidence 4444444444444444444444444444444444444444444444444444444444444444433
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.44 E-value=2.6e-12 Score=69.63 Aligned_cols=69 Identities=25% Similarity=0.294 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+++.|...+.++++++|.++.++..+|.+|..+|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 88 ~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 88 EKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC
Confidence 467788888888888898888899999999999999999999999999999888888888888877664
No 33
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.44 E-value=4.5e-12 Score=64.52 Aligned_cols=67 Identities=25% Similarity=0.365 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.++.++++.+|+++.+++.+|.++...|++++|+.+|++++.++|+++.++..++.++...+
T Consensus 62 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 62 YAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 4555555666666666555666666666666666666666666666666655555555555555443
No 34
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.44 E-value=1.3e-12 Score=84.45 Aligned_cols=67 Identities=28% Similarity=0.255 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++.+++.++...+
T Consensus 93 ~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g 159 (723)
T 4gyw_A 93 VQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVC 159 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcc
Confidence 3444444444444444444444444444444444544544455555444444444444444444433
No 35
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.44 E-value=1e-12 Score=73.60 Aligned_cols=69 Identities=16% Similarity=0.105 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQ-----------DNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++++|+++.+++++|.++..+ |++++|+..|+++++++|+++.++..++.++...|+
T Consensus 54 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~ 133 (217)
T 2pl2_A 54 LVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE 133 (217)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC
Confidence 356677777777777777777777777777777 777777777777777777777666666666655443
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.43 E-value=4.1e-12 Score=63.71 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..+++++..+|.++.+++.+|.++...|++++|+..+++++.++|+++.++..++.++...++
T Consensus 19 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 87 (118)
T 1elw_A 19 NIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNR 87 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhh
Confidence 467788888888888888888888888888888888888888888888888887777777777665543
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.43 E-value=2.7e-12 Score=76.24 Aligned_cols=70 Identities=19% Similarity=0.220 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 70 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|+++.++..++.++...++.
T Consensus 211 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999998888888887766543
No 38
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.42 E-value=3.7e-12 Score=65.40 Aligned_cols=68 Identities=21% Similarity=0.197 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC---HHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSL---STYAGLAYTYHLQDNFSAAITYYHKALWLKPDD---QFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~~ 68 (79)
++++|+..|+++++..|+++ .+++.+|.++..+|++++|+..|++++..+|++ +.++..++.++...|
T Consensus 17 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g 90 (129)
T 2xev_A 17 KYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEG 90 (129)
T ss_dssp CHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcC
Confidence 35677777777777777766 677777777777777777777777777777776 555666666655544
No 39
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.42 E-value=4e-12 Score=70.01 Aligned_cols=71 Identities=15% Similarity=0.090 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhcC
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRHG 71 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 71 (79)
++++|+.+++++++++|+++.+++.+|.+|..+|++++|+.+|++++.++|+++.++..++.+....++..
T Consensus 103 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 103 DYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999988888887765543
No 40
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.42 E-value=8.8e-13 Score=69.52 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++++|+.+|++++.++|+++......
T Consensus 67 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 126 (142)
T 2xcb_A 67 LYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALA 126 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHH
Confidence 578999999999999999999999999999999999999999999999999887444433
No 41
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.41 E-value=3e-12 Score=65.59 Aligned_cols=67 Identities=19% Similarity=0.172 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|+++++.+|.++.+++.+|.++...|++++|+.+|+++++++|+++.++..++.++...+
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~ 98 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK 98 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHh
Confidence 4556666666666666666666666666666666666666666666666666655555555554433
No 42
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.41 E-value=3.4e-12 Score=63.98 Aligned_cols=71 Identities=18% Similarity=0.120 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC--CHHHHHHHHHHHHHhhhcC
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD--DQFCTEMLSLALVDEGRHG 71 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~~~ 71 (79)
++++|+.+|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|+ +......+...+...+...
T Consensus 22 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l~~~~~~~ 94 (100)
T 3ma5_A 22 NASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKAEGLE 94 (100)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHHccccc
Confidence 5789999999999999999999999999999999999999999999999773 4555666676666555433
No 43
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.40 E-value=4.5e-12 Score=64.84 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+.+|+++++++|+++.+++++|.++..+|++++|+..|++++.++|+++......
T Consensus 42 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999998665443
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.40 E-value=4.2e-12 Score=76.91 Aligned_cols=70 Identities=7% Similarity=-0.032 Sum_probs=66.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDN-FSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 70 (79)
++++|+..|+++++++|+++.+|+++|.++..+|+ +++|+.+|++++.++|++..++..++.++...|+.
T Consensus 112 ~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~ 182 (382)
T 2h6f_A 112 RSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 182 (382)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCH
Confidence 47899999999999999999999999999999997 99999999999999999999999999999887654
No 45
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.40 E-value=2.1e-12 Score=69.27 Aligned_cols=67 Identities=12% Similarity=0.009 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH--HHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF--CTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~--~~~~l~~~~~~~ 67 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++. ....+..+....
T Consensus 60 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 128 (164)
T 3sz7_A 60 QHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKI 128 (164)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999875 344444444443
No 46
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.40 E-value=7.5e-12 Score=67.82 Aligned_cols=68 Identities=21% Similarity=0.105 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+|+++++++|+++.++..+|.+|..+|++++|+..+.+++..+|+++.++..++......+
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (184)
T 3vtx_A 20 DFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMID 87 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999999999999999999999988877777666544
No 47
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.40 E-value=4.1e-12 Score=65.12 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+++++++.+|.++.+++.+|.++...|++++|+.+|++++.++|++..++..++.++...+
T Consensus 65 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 65 EFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999999999999999999999999988888888877654
No 48
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.40 E-value=5.8e-12 Score=73.10 Aligned_cols=69 Identities=23% Similarity=0.224 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+++++|.+|..+|++++|+..|+++++++|++..++..++.++...|+
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 87 (281)
T 2c2l_A 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 87 (281)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999999999999999999999999999888888877654
No 49
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=1.5e-11 Score=61.66 Aligned_cols=64 Identities=17% Similarity=0.099 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+.+++++++.+|+++.+++.+|.++...|++++|+..|++++.++|+++.++..++.+.
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 53 DYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 4789999999999999999999999999999999999999999999999999998888777664
No 50
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.39 E-value=1.3e-11 Score=62.76 Aligned_cols=69 Identities=19% Similarity=0.297 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..++++++.+|+++.++..+|.++...|++++|+.++++++.++|+++.++..++.++...++
T Consensus 27 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (131)
T 2vyi_A 27 NFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNK 95 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999999999999999999999999999999888888888776554
No 51
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.39 E-value=2e-13 Score=74.33 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHhh-------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTL-------LNRSLSTY----AGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
+|++|+.+|++++++ +|+++.+| +++|.++..+|++++|+.+|+++++++|++......+
T Consensus 72 r~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 72 SFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred CHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 588999999999999 99999999 9999999999999999999999999999987443333
No 52
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.39 E-value=4.8e-12 Score=73.86 Aligned_cols=69 Identities=16% Similarity=0.050 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++..|+++.+++++|.++..+|++++|+..|++++.++|+++.++.+++.++...|+
T Consensus 181 ~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 181 KLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGK 249 (291)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999999999999999999999999999999888877665
No 53
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.39 E-value=1.1e-11 Score=65.66 Aligned_cols=65 Identities=17% Similarity=0.151 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+..|+++++.+|.++.+++.+|.++...|++++|+.+|++++.++|+++.++..++.++..
T Consensus 29 ~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~ 93 (166)
T 1a17_A 29 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 93 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 44555555555555555555555555555555555555555555555555555444444444443
No 54
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.38 E-value=1.9e-11 Score=61.71 Aligned_cols=65 Identities=34% Similarity=0.475 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+..++++++..|.++.+++.+|.++...|++++|+.++++++.++|+++.++..++.++..
T Consensus 25 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 45555666666666665556666666666666666666666666666666555555555544443
No 55
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.36 E-value=1.1e-11 Score=69.21 Aligned_cols=68 Identities=19% Similarity=0.065 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLN-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+..|+++++++| .++.+++++|.++..+|++++|+.+|+++++++|+++.++..++.++...+
T Consensus 22 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 90 (228)
T 4i17_A 22 NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMK 90 (228)
T ss_dssp CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcc
Confidence 35666666666666666 666666666666666666666666666666666666666666666655544
No 56
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.36 E-value=1.2e-11 Score=73.45 Aligned_cols=69 Identities=25% Similarity=0.234 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRS---------------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
++++|+.+|+++++++|.+ ..+++++|.+|..+|++++|+.+|+++++++|+++.++..++.++.
T Consensus 162 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 241 (336)
T 1p5q_A 162 KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHL 241 (336)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5789999999999999998 6999999999999999999999999999999999999999998887
Q ss_pred Hhhh
Q 038754 66 DEGR 69 (79)
Q Consensus 66 ~~~~ 69 (79)
..++
T Consensus 242 ~~g~ 245 (336)
T 1p5q_A 242 AVND 245 (336)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 7664
No 57
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=64.18 Aligned_cols=66 Identities=23% Similarity=0.074 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++|+.+|+++++.+|++ ..+++.+|.+|...|++++|+.+|++++.++|+++.++..++.++...
T Consensus 44 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 112 (148)
T 2dba_A 44 YGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKL 112 (148)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHc
Confidence 445555555555555554 555555555555555555555555555555555555444444444433
No 58
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.36 E-value=7.3e-12 Score=77.00 Aligned_cols=69 Identities=19% Similarity=0.259 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.++...++
T Consensus 332 ~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 332 EYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999888777777766543
No 59
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.8e-11 Score=63.80 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+.+++++++.+|+++.+++.+|.++..+|++++|+.+|++++.++|+++.++..+..+.
T Consensus 80 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 80 DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp CHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999998887777664
No 60
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.34 E-value=1.9e-11 Score=67.25 Aligned_cols=69 Identities=25% Similarity=0.224 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSL----------------STYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+.+|++++++.|.++ .+++++|.+|..+|++++|+.++++++.++|+++.++..++.++
T Consensus 53 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 132 (198)
T 2fbn_A 53 EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVAN 132 (198)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 57899999999999999887 89999999999999999999999999999999999998888888
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...++
T Consensus 133 ~~~~~ 137 (198)
T 2fbn_A 133 MYFGF 137 (198)
T ss_dssp HHHTC
T ss_pred HHccc
Confidence 77654
No 61
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.34 E-value=1.9e-11 Score=73.68 Aligned_cols=69 Identities=14% Similarity=0.088 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+++++++++|+++.+++.+|.+|..+|++++|+..|+++++++|+++.++..++.+....++
T Consensus 288 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 288 DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999888888887776554
No 62
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.34 E-value=3.4e-11 Score=61.74 Aligned_cols=64 Identities=6% Similarity=-0.057 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+..|+++++.+|++ +.+++.+|.++..+|++++|+..|++++...|+++.+......+.
T Consensus 54 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 54 NFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120 (129)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 5789999999999999999 999999999999999999999999999999999987665554443
No 63
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.33 E-value=1.9e-11 Score=68.28 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHH-------HHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFC-------TEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~-------~~~l~~~~~~~ 67 (79)
++++|+.+|+++++.+|+++.++..+|.+|..+|++++|+..|+++++++|+++.. +..++.+....
T Consensus 57 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~ 130 (228)
T 4i17_A 57 KYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQA 130 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999944 55555554443
No 64
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.33 E-value=2e-11 Score=62.04 Aligned_cols=69 Identities=19% Similarity=0.124 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC--CHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD--DQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|.++.+++.+|.+|..+|++++|+..|++++.++|+ +......+...+...++
T Consensus 34 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 34 QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 5789999999999999999999999999999999999999999999999884 45555566666655543
No 65
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.33 E-value=4.9e-11 Score=60.14 Aligned_cols=67 Identities=33% Similarity=0.478 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++.+|.++.++..+|.++...|++++|+..|++++.++|+++.++..++.+....
T Consensus 58 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 58 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999998888877654
No 66
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.33 E-value=2.5e-11 Score=75.08 Aligned_cols=69 Identities=17% Similarity=0.155 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|+++.++..++.++...++
T Consensus 21 ~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 21 DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGK 89 (477)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 356677777777777777777777777777777777777777777777777776666666666655443
No 67
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.32 E-value=5e-12 Score=65.39 Aligned_cols=54 Identities=22% Similarity=0.143 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+..|+++++++|+++.+++.+|.+|...|++++|+..|+++++++|++.
T Consensus 66 ~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 66 KDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 478999999999999999999999999999999999999999999999999865
No 68
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.32 E-value=5.5e-11 Score=62.94 Aligned_cols=63 Identities=22% Similarity=0.231 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++++|+.+++++++.+|.++.+++.+|.++..+|++++|+.+|++++.++|+++.++..++.+
T Consensus 62 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 62 CYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998776555444
No 69
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.32 E-value=3e-11 Score=68.36 Aligned_cols=69 Identities=22% Similarity=0.235 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.++..+|.++...|++++|+.+|++++.++|+++.++..++.++...|+
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~ 126 (275)
T 1xnf_A 58 LRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 126 (275)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhcc
Confidence 467788888888888888888888888888888888888888888888888888777777777766543
No 70
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.31 E-value=1.6e-11 Score=78.56 Aligned_cols=72 Identities=11% Similarity=-0.039 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhcCC
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRHGI 72 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 72 (79)
++++|+..|+++++.+|+++.+|+++|.++..+|++++|+..|+++++++|+++.++.+++.++...|+...
T Consensus 448 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 448 DVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 478999999999999999999999999999999999999999999999999999999999999988776543
No 71
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.30 E-value=2.7e-11 Score=74.52 Aligned_cols=69 Identities=20% Similarity=0.232 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRS---------------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
+|++|+..|+++++++|.+ ..+|+++|.||.++|++++|+.+|++++.++|++..++..++.++.
T Consensus 283 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~ 362 (457)
T 1kt0_A 283 KYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQL 362 (457)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 5789999999999999998 7999999999999999999999999999999999999999998887
Q ss_pred Hhhh
Q 038754 66 DEGR 69 (79)
Q Consensus 66 ~~~~ 69 (79)
..++
T Consensus 363 ~~g~ 366 (457)
T 1kt0_A 363 LMNE 366 (457)
T ss_dssp HTTC
T ss_pred HccC
Confidence 7654
No 72
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.30 E-value=4.4e-11 Score=65.90 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH----------------HHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ----------------FCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~l~~~~ 64 (79)
++++|+..|+++++++|+++.+++++|.+|..+|++++|+..|++++++.|++. .++..++.++
T Consensus 52 ~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 131 (213)
T 1hh8_A 52 NMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMY 131 (213)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999888766 7777777777
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 132 ~~~g~ 136 (213)
T 1hh8_A 132 AKKEE 136 (213)
T ss_dssp HHTTC
T ss_pred HHccC
Confidence 66553
No 73
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.30 E-value=4.8e-11 Score=70.30 Aligned_cols=69 Identities=23% Similarity=0.289 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.+|+++|.+|...|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 228 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 296 (365)
T 4eqf_A 228 EFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGA 296 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC
Confidence 467778888888888888888888888888888888888888888888888877777777777766554
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=5.9e-11 Score=66.42 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+++++++.+|.++.++..+|.++...|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 154 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 222 (258)
T 3uq3_A 154 DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 222 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 478899999999999999999999999999999999999999999999999999888888888877654
No 75
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.30 E-value=2.3e-11 Score=61.91 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC-------HHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD-------QFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~l~~~~~~~~~ 69 (79)
++++|+.++.++++.+|.++.+++.+|.++...|++++|+.+|++++.++|++ ..++..++.++...++
T Consensus 19 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 94 (131)
T 1elr_A 19 DFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEK 94 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhcc
Confidence 47899999999999999999999999999999999999999999999998877 7777777777766543
No 76
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.29 E-value=5.3e-11 Score=70.11 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.+++.+|.+|..+|++++|+..|++++.++|+++.++..++.++...|+
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 148 (365)
T 4eqf_A 80 DLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSH 148 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcccc
Confidence 578999999999999999999999999999999999999999999999999999999999988877664
No 77
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.29 E-value=6.3e-11 Score=64.25 Aligned_cols=67 Identities=13% Similarity=0.073 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC--HHHHHHHHHHHHHhhhc
Q 038754 4 EAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD--QFCTEMLSLALVDEGRH 70 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~ 70 (79)
+|+..++++++.+|+++.+++++|.++...|++++|+..|+++++++|++ +.++..++.++...|+.
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 160 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQG 160 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSS
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCC
Confidence 47889999999999999999999999999999999999999999999986 56888899888887764
No 78
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.29 E-value=1.5e-11 Score=63.69 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC-----CHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD-----DQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~l~~~~~~~ 67 (79)
++++|+..++++++++|+++.+++.+|.++..+|++++|+..|++++.++|+ +..+...+..+....
T Consensus 58 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 58 QPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999998 666666666655443
No 79
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.28 E-value=4.1e-11 Score=59.90 Aligned_cols=53 Identities=19% Similarity=0.070 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
.++|...++++++++|+++.+++.+|..++..|+|++|+..|++++..+|.++
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 47899999999999999999999999999999999999999999999999854
No 80
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.28 E-value=9.3e-11 Score=68.13 Aligned_cols=69 Identities=22% Similarity=0.145 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+++++++.+|+++.+++.+|.++...|++++|+.+|+++++++|+++.++..+..+....++
T Consensus 287 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~ 355 (359)
T 3ieg_A 287 KPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQ 355 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999888888877766543
No 81
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.28 E-value=4.8e-11 Score=64.41 Aligned_cols=59 Identities=24% Similarity=0.320 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHccCCCCHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYT-YHLQDNF--SAAITYYHKALWLKPDDQFCTEMLS 61 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~l~ 61 (79)
++|+.+|+++++++|+++.++..+|.+ +...|++ ++|+.+|++++.++|+++.++..++
T Consensus 61 ~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 61 SNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 333444444444444444444444443 3333333 4444444444444444333333333
No 82
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.27 E-value=3.8e-11 Score=74.00 Aligned_cols=68 Identities=16% Similarity=0.080 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 2 YHEAISCYERALTLLN---RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+++|+.+|+++++++| .++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..++.++...++
T Consensus 237 ~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 237 SQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp HHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 7899999999999999 9999999999999999999999999999999999999888888887776654
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.26 E-value=1.9e-11 Score=66.01 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH-HHHhhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA-LVDEGR 69 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~-~~~~~~ 69 (79)
+++|+..++++++.+|.++.+++.+|.+|...|++++|+.+|++++.++|+++.++..++.+ +...++
T Consensus 26 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 26 PEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp -CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 56788999999999999999999999999999999999999999999999999998888888 555444
No 84
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.25 E-value=4.1e-11 Score=73.24 Aligned_cols=69 Identities=25% Similarity=0.289 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+++.+|.+|..+|++++|+..|++++.++|+++.++..++.++...|+
T Consensus 40 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 108 (537)
T 3fp2_A 40 NFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGN 108 (537)
T ss_dssp CCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999999999999999999999999998888888877654
No 85
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=4.5e-11 Score=59.81 Aligned_cols=55 Identities=20% Similarity=0.001 Sum_probs=49.5
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 15 LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
.+|+++.+++.+|.+|..+|++++|+.+|+++++++|+++.++..++.++...|+
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 56 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDR 56 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999999999999999999999887765
No 86
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.24 E-value=1.6e-10 Score=67.10 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+++.+|.++...|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 86 (359)
T 3ieg_A 18 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGK 86 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999999999999999999999999888888888877654
No 87
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.24 E-value=1.8e-10 Score=67.56 Aligned_cols=69 Identities=22% Similarity=0.331 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+++++++.+|+++.+++.+|.++...|++++|+..|++++.++|+++.++..++.++...|+
T Consensus 232 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 300 (368)
T 1fch_A 232 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGA 300 (368)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC
Confidence 356777777777777777777777777777777777777777777777777777666666666665543
No 88
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.23 E-value=1.3e-10 Score=72.47 Aligned_cols=66 Identities=20% Similarity=0.094 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++|+..|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|+++.++..++.++...
T Consensus 39 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 39 TTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 455555555555555555555555555555555555555555555555555555555555554443
No 89
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.23 E-value=1.8e-11 Score=72.75 Aligned_cols=65 Identities=20% Similarity=0.113 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..+..+..
T Consensus 245 ~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 245 RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999988877776643
No 90
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.23 E-value=1.7e-10 Score=67.63 Aligned_cols=69 Identities=22% Similarity=0.235 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.+++.+|.++...|++++|+..|++++.++|+++.++..++.++...|+
T Consensus 79 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 147 (368)
T 1fch_A 79 DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESL 147 (368)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999999999999999999999999999888888877654
No 91
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.23 E-value=3e-10 Score=57.43 Aligned_cols=61 Identities=26% Similarity=0.242 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHH
Q 038754 1 IYHEAISCYERALTLL-------NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLS 61 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 61 (79)
+|..|+.+|+.+++.. +..+.++..+|.+++++|+++.|+..++++++++|+++.+..++.
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 5789999999999964 356889999999999999999999999999999999998866655
No 92
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.23 E-value=9.7e-11 Score=63.26 Aligned_cols=65 Identities=17% Similarity=0.097 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLL-N-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+.+++..++.+++.+ | +..+++|++|..++++|+|++|..+++++++++|+|..+..........
T Consensus 51 ~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 51 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKA 117 (152)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 468999999999999 7 5689999999999999999999999999999999999887664443333
No 93
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.22 E-value=5.4e-11 Score=71.67 Aligned_cols=69 Identities=16% Similarity=0.120 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHh----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALT----------------LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++++|+..|+++++ .+|.++.+++++|.+|.++|++++|+.+|+++++++|+++.++..++.++
T Consensus 238 ~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 317 (370)
T 1ihg_A 238 NWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGW 317 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 57899999999999 78888999999999999999999999999999999999999999999888
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...++
T Consensus 318 ~~~g~ 322 (370)
T 1ihg_A 318 QGLKE 322 (370)
T ss_dssp HHTTC
T ss_pred HHccC
Confidence 77654
No 94
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.22 E-value=3.3e-10 Score=60.44 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++|+.+++++++.+|.++.++..+|.++...|++++|+..+++++.++|+++.++..++.++...
T Consensus 92 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (186)
T 3as5_A 92 YDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQM 157 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHc
Confidence 455555555555555555555566666666666666666666666665555555555555544443
No 95
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=8.4e-11 Score=69.83 Aligned_cols=67 Identities=30% Similarity=0.359 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|+++++.+|.++.++..+|.++...|++++|+..|+++++++|++..++..++.++...|
T Consensus 287 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 353 (388)
T 1w3b_A 287 VAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 4555666666666666666666666666666666666666666666666655555555555554433
No 96
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.22 E-value=3e-10 Score=57.67 Aligned_cols=64 Identities=38% Similarity=0.488 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
+++|+.+++++++..|.++.+++.+|.++...|++++|+..+++++...|.++.++..++.++.
T Consensus 51 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 114 (136)
T 2fo7_A 51 YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 114 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 3445555555555555555555555555555555555555555555555555444444444433
No 97
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.21 E-value=1.1e-10 Score=72.23 Aligned_cols=63 Identities=22% Similarity=0.231 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++++|+..++++++++|+++.+++++|.+|..+|++++|+..|+++++++|+++.++..++.+
T Consensus 55 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 55 CYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999888777776
No 98
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.21 E-value=1.3e-10 Score=67.49 Aligned_cols=68 Identities=12% Similarity=0.035 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC--HHHHHHHHHHHHHhhhc
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD--QFCTEMLSLALVDEGRH 70 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~ 70 (79)
.+|+..++++++.+|+++.+++++|.++...|++++|+..|+++++++|++ ..++..++.++...|+.
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 468889999999999999999999999999999999999999999999998 78899999999887753
No 99
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.21 E-value=7.4e-11 Score=68.06 Aligned_cols=70 Identities=36% Similarity=0.576 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH-Hhhhc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV-DEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~ 70 (79)
++++|+.+++++++.+|+++.++..+|.++...|++++|+.+|+++++++|+++.++..++.++. ..|+.
T Consensus 251 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~g~~ 321 (330)
T 3hym_B 251 KYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDS 321 (330)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTTTTC-
T ss_pred CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHhCch
Confidence 47899999999999999999999999999999999999999999999999999999999998884 33433
No 100
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.21 E-value=4.7e-11 Score=70.97 Aligned_cols=69 Identities=16% Similarity=0.113 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSL-----------------STYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++++|+.+|+++++..|++. .+++++|.+|..+|++++|+.+|++++.++|++..++..++.+
T Consensus 194 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a 273 (338)
T 2if4_A 194 KLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKA 273 (338)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 47899999999999999887 4999999999999999999999999999999999999999988
Q ss_pred HHHhhh
Q 038754 64 LVDEGR 69 (79)
Q Consensus 64 ~~~~~~ 69 (79)
+...++
T Consensus 274 ~~~~g~ 279 (338)
T 2if4_A 274 KAELGQ 279 (338)
T ss_dssp HHTTTC
T ss_pred HHHcCC
Confidence 877654
No 101
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.20 E-value=1.9e-10 Score=58.42 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRS-------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+++++++..|.+ +.+++.+|.++...|++++|+.+|++++.++| ++.....+..+....++
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 53 DYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 5789999999999999887 99999999999999999999999999999999 57777777777766544
No 102
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.20 E-value=4.9e-10 Score=56.84 Aligned_cols=69 Identities=36% Similarity=0.475 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..++++++.+|.++.+++.+|.++...|++++|+..+++++..+|+++.++..++.++...++
T Consensus 16 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (136)
T 2fo7_A 16 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD 84 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred cHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999999999999999999888878777765543
No 103
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.20 E-value=2.3e-10 Score=65.06 Aligned_cols=66 Identities=15% Similarity=0.145 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH---HHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ---FCTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~ 66 (79)
++++|+..|+++++..|++ +.+++.+|.+|..+|++++|+..|++++++.|+++ .++..++.++..
T Consensus 30 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHH
Confidence 5789999999999999999 99999999999999999999999999999999764 556666666655
No 104
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.20 E-value=4.8e-10 Score=59.77 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+++++++..|.++.++..+|.++...|++++|+..+++++.++|+++.++..++.++...+
T Consensus 57 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 124 (186)
T 3as5_A 57 AVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 124 (186)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcC
Confidence 46778888888888888888888888888888888888888888888888888777777776666544
No 105
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=3.7e-10 Score=67.07 Aligned_cols=68 Identities=26% Similarity=0.251 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+++|...++++++.+|.++.+|+.+|.++...|++++|+..|++++.++|++..++..++.++...|+
T Consensus 49 ~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 116 (388)
T 1w3b_A 49 LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGD 116 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCC
Confidence 56677777777777777777777777777777777777777777777777777777677666665544
No 106
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.19 E-value=4.1e-10 Score=61.84 Aligned_cols=67 Identities=21% Similarity=0.168 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++.+|+++.++..+|.++...|++++|+..|++++.++|++..++..++.++...
T Consensus 23 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 23 DYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGR 89 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 4678888888888888888888888888888888888888888888888888887777777776654
No 107
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.18 E-value=3.7e-10 Score=70.48 Aligned_cols=67 Identities=18% Similarity=0.023 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++++|+++.+++++|.+|..+|++++|+..|+++++++|+++.++..++.++...
T Consensus 72 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 72 RHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999999999999999999998888888776
No 108
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.18 E-value=5.1e-10 Score=67.25 Aligned_cols=69 Identities=22% Similarity=0.153 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..++++++.+|+++.+|+.+|.++...|++++|+..|+++++++|+++.++..++.+....++
T Consensus 310 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 310 KPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 478899999999999999999999999999999999999999999999999999888888766555443
No 109
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.18 E-value=9.1e-11 Score=72.34 Aligned_cols=69 Identities=10% Similarity=-0.070 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHccCC---CCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQ--------DNFSAAITYYHKALWLKP---DDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al~~~p---~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++++|+++.+|+++|.+|..+ |++++|+.+|+++++++| +++.++..++.++...|+
T Consensus 194 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~ 273 (474)
T 4abn_A 194 HVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEES 273 (474)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999 999999999999999999 999999999998887665
No 110
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.17 E-value=4.8e-10 Score=67.36 Aligned_cols=69 Identities=19% Similarity=0.127 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+|+++.+++.+|.++...|++++|+..|+++++++|++..++..++.++...|+
T Consensus 41 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 109 (450)
T 2y4t_A 41 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK 109 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 478899999999999999999999999999999999999999999999999999888888888776654
No 111
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.17 E-value=7.7e-10 Score=61.54 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
++|+..++++++..|.++.++..+|.++...|++++|+..+++++.++|+++.++..++.++
T Consensus 108 ~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 108 KEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 34444444444444444444444444444444444444444444444444443333333333
No 112
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.16 E-value=5.2e-11 Score=76.20 Aligned_cols=68 Identities=21% Similarity=0.158 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++++|+++.+++++|.++..+|++++ +.+|+++++++|++..++.+++.++...|+
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~ 549 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGD 549 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCC
Confidence 46778888888888888888888888888888888888 888888888888888777777777766554
No 113
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.16 E-value=2.6e-10 Score=64.57 Aligned_cols=61 Identities=23% Similarity=0.225 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLS 61 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 61 (79)
++++|+.+|+++++.+|.++.++..+|.+|..+|++++|+.+|++++.++|+++.++..++
T Consensus 89 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 89 QDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 3567777777777777777777777777777777777777777777777777776666666
No 114
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.16 E-value=7.7e-10 Score=63.70 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+++++++.+|+++.++..+|.++...|++++|+..|+++++++|+++.++..++.++...|
T Consensus 187 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g 254 (327)
T 3cv0_A 187 NYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMS 254 (327)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 35666777777777777777777777777777777777777777777777776666666666555544
No 115
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.15 E-value=9e-10 Score=61.26 Aligned_cols=68 Identities=24% Similarity=0.317 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+++++++.+|.++.++..+|.++...|++++|+..|+++++++|+++.++..++.++...+
T Consensus 72 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 139 (243)
T 2q7f_A 72 ELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLE 139 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 46778888888888888888888888888888888888888888888888888777777776666544
No 116
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=5.7e-10 Score=67.73 Aligned_cols=68 Identities=28% Similarity=0.289 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|+++++.+| ++.+++.+|.++...|++++|+..|+++++++|+++.++..++.++...|+
T Consensus 21 ~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 88 (514)
T 2gw1_A 21 KYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGK 88 (514)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhh
Confidence 57899999999999998 689999999999999999999999999999999999888888888777654
No 117
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.15 E-value=8.8e-10 Score=63.47 Aligned_cols=69 Identities=19% Similarity=0.164 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++.++..+|.++...|++++|+..|+++++++|++..++..++.++...|+
T Consensus 36 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~ 104 (327)
T 3cv0_A 36 NLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN 104 (327)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999999999999999999999999888888887766543
No 118
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.14 E-value=5.7e-10 Score=62.61 Aligned_cols=66 Identities=20% Similarity=0.089 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++|+.+++++++.+|.++.++..+|.++...|++++|+..|++++.++|++..++..++.++...
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 118 (252)
T 2ho1_A 53 TEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQ 118 (252)
T ss_dssp TGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHH
Confidence 456666666666666666666666666666666666666666666666666666665555555443
No 119
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.13 E-value=6.6e-10 Score=62.29 Aligned_cols=66 Identities=17% Similarity=0.143 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH---HHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF---CTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~l~~~~~~ 66 (79)
++++|+..|+++++..|.+ +.+++.+|.+|..+|++++|+..|+++++++|+++. ++..++.++..
T Consensus 19 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~ 90 (225)
T 2yhc_A 19 NWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMA 90 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHh
Confidence 5789999999999999987 479999999999999999999999999999999874 55666666554
No 120
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.12 E-value=9.6e-10 Score=63.37 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQD-NFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++|+..++++++.+|+++.+++.+|.++...| ++++|+..|++++.++|+++.++..++.++...
T Consensus 72 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 138 (330)
T 3hym_B 72 ANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE 138 (330)
T ss_dssp HHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc
Confidence 445555555555555555555555555555555 555555555555555555555555555544443
No 121
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=4e-10 Score=63.00 Aligned_cols=63 Identities=14% Similarity=0.089 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC------CCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLK------PDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~ 63 (79)
++++|+.+++++++.+|+++.++..+|.++..+|++++|+..|+++++++ |++..++..+..+
T Consensus 188 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 188 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999 9888777776654
No 122
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.10 E-value=8.4e-10 Score=64.39 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSA-AITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+..++++++++|+++.+++++|.++...|++.+ +..+++++++++|+++.+....
T Consensus 215 ~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 215 RWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 57899999999999999999999999999999999987 5688999999999999777553
No 123
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.10 E-value=2.5e-09 Score=59.99 Aligned_cols=67 Identities=13% Similarity=-0.027 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+++++++.+|.++.++..+|.++...|++++|+..+++++..+|++..++..++.++...|
T Consensus 157 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 223 (252)
T 2ho1_A 157 PAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFE 223 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHcc
Confidence 5666677777777777777777777777777777777777777777777766665555555554433
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.10 E-value=1.4e-09 Score=63.43 Aligned_cols=67 Identities=19% Similarity=0.187 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHh-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH-HHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALT-LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF-CTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~l~~~~~~~~ 68 (79)
+++|+..|+++++ ++|++..+|..+|.++...|++++|...|+++++++|+++. ++..++..+...|
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 148 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE 148 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhc
Confidence 3789999999999 79999999999999999999999999999999999999875 7877777766554
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.10 E-value=7.4e-10 Score=68.64 Aligned_cols=65 Identities=25% Similarity=0.379 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
++++|+..++++++.+|+++.+|..+|.+|...|++++|+..|+++++++|+++.++..++.++.
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALE 595 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999988877653
No 126
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.10 E-value=1.7e-09 Score=59.35 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 3 HEAISCYERALT--LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 3 ~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++|+.+++++++ ..|.++.+++.+|.++...|++++|+..|+++++.+|+++.++..++.+
T Consensus 94 ~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 94 AESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 334444444444 2233334444444444444444444444444444444444333333333
No 127
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.09 E-value=1.7e-09 Score=61.09 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTE 58 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 58 (79)
++++|+.+|+++++++|.++.+++.+|.+|...|++++|+..|+++++++|+++....
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL 149 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHH
Confidence 5789999999999999999999999999999999999999999999999999984443
No 128
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.08 E-value=1e-09 Score=60.42 Aligned_cols=66 Identities=6% Similarity=0.062 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+..|++++ +| ++.+++++|.+|...|++++|+..|++++.++|+++.++..++.++...++
T Consensus 21 ~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~ 86 (213)
T 1hh8_A 21 DWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEK 86 (213)
T ss_dssp CHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHccc
Confidence 4788999999885 33 789999999999999999999999999999999999999889888877654
No 129
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.08 E-value=4.7e-10 Score=55.62 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNR--SLSTYAGLAYTYHLQ-DNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+.+++++++.+|. ++.+++.+|.++... |++++|+.++++++..+|+++
T Consensus 55 ~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred CHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 478999999999999999 999999999999999 999999999999999999763
No 130
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.07 E-value=8.8e-10 Score=64.04 Aligned_cols=54 Identities=19% Similarity=0.049 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..+++++..+|++.
T Consensus 132 ~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~ 185 (287)
T 3qou_A 132 NYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTR 185 (287)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHH
T ss_pred CHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchH
Confidence 578999999999999999999999999999999999999888777766666443
No 131
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.06 E-value=1.6e-10 Score=62.66 Aligned_cols=59 Identities=10% Similarity=-0.039 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|++++.++| ++.....+
T Consensus 21 ~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~ 79 (176)
T 2r5s_A 21 EHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLI 79 (176)
T ss_dssp CHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHH
Confidence 578999999999999999999999999999999999999999999999999 77554433
No 132
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.05 E-value=1.5e-09 Score=61.71 Aligned_cols=70 Identities=14% Similarity=0.055 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHccCCCC---HHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTY-----------------AGLAYTYHLQDNFSAAITYYHKALWLKPDD---QFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l 60 (79)
++++|+..|+++++..|+++.+. +.+|.+|...|++++|+..|+++++..|++ +.++..+
T Consensus 112 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l 191 (261)
T 3qky_A 112 DTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGA 191 (261)
T ss_dssp HHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHH
Confidence 36899999999999999987666 888999999999999999999999999985 4577777
Q ss_pred HHHHHHhhhc
Q 038754 61 SLALVDEGRH 70 (79)
Q Consensus 61 ~~~~~~~~~~ 70 (79)
+.++...|..
T Consensus 192 ~~~~~~~g~~ 201 (261)
T 3qky_A 192 MRAYIAYAEQ 201 (261)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHhccc
Confidence 8777766443
No 133
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.03 E-value=2.5e-09 Score=65.38 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.+++++++.+|+++.++..+|.++...|++++|+..|++++.++|+++.++..++.++..
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 356 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK 356 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555444444444443
No 134
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.01 E-value=2.3e-09 Score=55.62 Aligned_cols=51 Identities=20% Similarity=0.185 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
.+.++.++|.++++.|++++|+.+|+++++++|+++.++.+++.++...|+
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~ 57 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKK 57 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhh
Confidence 467889999999999999999999999999999999999999998887664
No 135
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.01 E-value=4.1e-09 Score=63.79 Aligned_cols=65 Identities=20% Similarity=0.133 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.++++++..+|.++.++.++|.+|...|++++|+..|+++++++|++..++..++.++..
T Consensus 229 ~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 229 EGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp -CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999888888777654
No 136
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.01 E-value=2.2e-09 Score=60.71 Aligned_cols=66 Identities=14% Similarity=0.036 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRS----LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+..++++++ .|.+ ..++..+|.++...|++++|+..|+++++++|+++.++..++.++...|
T Consensus 53 ~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 122 (272)
T 3u4t_A 53 YDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG 122 (272)
T ss_dssp HHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc
Confidence 4555555555555 2222 2335556666666666666666666666666655555555555554443
No 137
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.98 E-value=4.1e-09 Score=59.07 Aligned_cols=69 Identities=17% Similarity=0.088 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHccCCCCH---HHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTY-----------------AGLAYTYHLQDNFSAAITYYHKALWLKPDDQ---FCTEMLS 61 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~ 61 (79)
+++|+..|+++++..|+++.++ +.+|.+|...|++.+|+..|+++++..|+++ .++..++
T Consensus 112 ~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~ 191 (225)
T 2yhc_A 112 ARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLME 191 (225)
T ss_dssp HHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHH
Confidence 6789999999999999987655 6789999999999999999999999999987 4566777
Q ss_pred HHHHHhhhc
Q 038754 62 LALVDEGRH 70 (79)
Q Consensus 62 ~~~~~~~~~ 70 (79)
.++...|+.
T Consensus 192 ~~~~~~g~~ 200 (225)
T 2yhc_A 192 NAYRQMQMN 200 (225)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHcCCc
Confidence 777766543
No 138
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.96 E-value=9.6e-10 Score=63.77 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+..++++++++|+++.+++++|.+|..+|++++|+..|+++++++|+++
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 578999999999999999999999999999999999999999999999999763
No 139
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.96 E-value=8.4e-09 Score=63.94 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSL 62 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 62 (79)
++|+.+|+++++.+|.+..+|+.+|.+|.+.|++++|+..|++++.++|++..++..++.
T Consensus 390 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 449 (597)
T 2xpi_A 390 SEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGM 449 (597)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 344444444444444444444444444444444444444444444444444333333333
No 140
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.93 E-value=4.4e-09 Score=61.05 Aligned_cols=68 Identities=19% Similarity=0.191 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH-------HHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF-------CTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~~~~l~~~~~~~ 67 (79)
++++|+.+|++++++.|.+ ..++.++|.++..+|++++|+.+|++++.+.|++.. ++..++.++...
T Consensus 133 ~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~ 212 (292)
T 1qqe_A 133 DYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAA 212 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHc
Confidence 4789999999999998754 578999999999999999999999999999998753 345555555544
Q ss_pred h
Q 038754 68 G 68 (79)
Q Consensus 68 ~ 68 (79)
|
T Consensus 213 g 213 (292)
T 1qqe_A 213 T 213 (292)
T ss_dssp T
T ss_pred C
Confidence 3
No 141
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.92 E-value=1.2e-08 Score=59.53 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-------cCCH-------HHHHHHHHHHHc-cCCCCHHHHHHHHHHHHHh
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHL-------QDNF-------SAAITYYHKALW-LKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------~~A~~~~~~al~-~~p~~~~~~~~l~~~~~~~ 67 (79)
++|+..|+++++.+|+++.+|+.+|..+.. .|++ ++|+..|+++++ ++|++..++..++..+...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 578899999999999999999999999874 5885 899999999999 7999999998888887765
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
|+
T Consensus 113 ~~ 114 (308)
T 2ond_A 113 MK 114 (308)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.1e-08 Score=62.18 Aligned_cols=63 Identities=25% Similarity=0.215 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
+++|+..++++++.+|+++.++..+|.+|...|++++|+..|++++.++|+++.++..+....
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999997776554333
No 143
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=5.5e-09 Score=63.25 Aligned_cols=67 Identities=27% Similarity=0.322 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL---QDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++|+.+|+++++++|+++.++..+|.++.. .++.++|+..|+++++++|+++.++..++..+...+
T Consensus 154 y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~ 223 (472)
T 4g1t_A 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMR 223 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 6899999999999999999999999988654 567788999999999999999988877776655443
No 144
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.84 E-value=6.7e-09 Score=58.50 Aligned_cols=69 Identities=23% Similarity=0.294 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--------CCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTL--------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL--------KPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 64 (79)
++++|+.+++++++. +|....++.++|.+|..+|++++|+.+|++++.+ +|....++..++.++
T Consensus 100 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 179 (283)
T 3edt_B 100 KYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCY 179 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 578999999999998 4667899999999999999999999999999999 665566777777777
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 180 ~~~g~ 184 (283)
T 3edt_B 180 LKQGK 184 (283)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 76654
No 145
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.83 E-value=4.3e-08 Score=62.06 Aligned_cols=67 Identities=10% Similarity=0.159 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQD--NFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+++++.+++++++.+|++..+|+..++++...+ ++++++.++.++++++|.+.-+|...+.++...+
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 566777777777777777777777777777777 5577777777777777777777766666665544
No 146
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.82 E-value=2.8e-08 Score=52.15 Aligned_cols=64 Identities=17% Similarity=0.102 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 3 HEAISCYERALTLL-N-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 3 ~~A~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
.+++..++.+++.+ | ..-+++|.+|..+++.|+|..|..+++.+|++.|+|..+.......-..
T Consensus 55 ~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~ 120 (126)
T 1nzn_A 55 RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKA 120 (126)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 56889999999987 4 5678999999999999999999999999999999999887554444433
No 147
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.2e-08 Score=49.70 Aligned_cols=51 Identities=14% Similarity=0.228 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
++.+++.+|.++...|++++|+..|++++.++|+++.++..++.++...|+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 53 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGE 53 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999999999988877664
No 148
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.81 E-value=1.2e-08 Score=59.24 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHccCCCC------HHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQ-DNFSAAITYYHKALWLKPDD------QFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~ 67 (79)
++++|+.+|++++++.+.. ..++.++|.+|... |++++|+.+|++++.+.|++ ..++..++.++...
T Consensus 92 ~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~ 171 (292)
T 1qqe_A 92 NSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALD 171 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHh
Confidence 5789999999999998753 56899999999996 99999999999999998854 34556667766655
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
|+
T Consensus 172 g~ 173 (292)
T 1qqe_A 172 GQ 173 (292)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 149
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.77 E-value=1.6e-07 Score=50.15 Aligned_cols=71 Identities=10% Similarity=0.033 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH---HHHHHHhhhcCC
Q 038754 2 YHEAISCYERALTLLN-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML---SLALVDEGRHGI 72 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l---~~~~~~~~~~~~ 72 (79)
..+++.+++.+++.+| ..-+++|.+|..++++|+|.+|..+.+.+|++.|+|..+.... .+.+...|-.++
T Consensus 58 i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~kdGliG~ 132 (144)
T 1y8m_A 58 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETLKGV 132 (144)
T ss_dssp HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhchhhh
Confidence 3578999999999988 4678999999999999999999999999999999998776553 444444444443
No 150
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.77 E-value=3.8e-08 Score=47.29 Aligned_cols=52 Identities=31% Similarity=0.426 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 18 RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
.++.+++.+|.++...|++++|+.+|++++.++|+++.++..++.++...++
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 58 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD 58 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhh
Confidence 4578999999999999999999999999999999999888888888876554
No 151
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.76 E-value=9.1e-08 Score=56.68 Aligned_cols=66 Identities=6% Similarity=-0.046 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTY----HLQ---DNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++++.++..++..+|++..+|+..+.++ ... +++.+++.++.+++.++|.+..++...+.++...
T Consensus 85 ~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l 157 (306)
T 3dra_A 85 LYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTF 157 (306)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 34455555555555555555555555555 444 4455555555555555555555554444444443
No 152
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.75 E-value=4.1e-08 Score=58.43 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHhhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSL----STYAGLAYTYHLQDNFSAAITYYHKALWL------KPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|+.+|+++++.+|+++ .+++.+|.+|...|++++|+.+|++++.+ +|....++..++.++...|+
T Consensus 63 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 141 (411)
T 4a1s_A 63 DCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGR 141 (411)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCC
Confidence 57899999999999999987 58999999999999999999999999988 45555666667776665543
No 153
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.74 E-value=6.1e-08 Score=54.01 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNR--SLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
++++|+.+|+++.+.++. ++.+++++|.+|.. .+++++|+.+|++++.+ |.++.++..++.++..
T Consensus 104 d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 104 DVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp CHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 456777777777777763 47777777777777 77777777777777777 5556666667666653
No 154
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.74 E-value=1.1e-07 Score=56.40 Aligned_cols=68 Identities=7% Similarity=0.006 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFS--AAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+++++.++.++++.+|++..+|+..+.++...|.++ +++.++++++.++|.|.-++.....++...+.
T Consensus 126 ~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 126 PYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp THHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 578899999999999999999999999999999998 99999999999999999999888887776543
No 155
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.73 E-value=8.4e-08 Score=60.75 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDN----------FSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++|+..+++++..+|++..+|+..+.++...|+ +++++.+++++++++|++..+|...+.++...+
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~ 121 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 121 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 688999999999999999999999999999999 999999999999999999999999888888765
No 156
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.73 E-value=1.6e-07 Score=58.21 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHh-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH-HHHHHHHHHHHHhh
Q 038754 3 HEAISCYERALT-LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ-FCTEMLSLALVDEG 68 (79)
Q Consensus 3 ~~A~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~l~~~~~~~~ 68 (79)
++|+..|+++++ ..|+++.+|..+|.++...|++++|...|+++++++|.++ .++..++......|
T Consensus 303 ~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 370 (530)
T 2ooe_A 303 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE 370 (530)
T ss_dssp HHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhc
Confidence 389999999997 8999999999999999999999999999999999999985 57777666554443
No 157
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.72 E-value=2.7e-07 Score=55.27 Aligned_cols=64 Identities=9% Similarity=0.154 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDN--FSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
.+++.++..++..+|+++.+|+..+.++...++ +++++.++.+++.++|.|.-+|.....++..
T Consensus 91 ~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~ 156 (331)
T 3dss_A 91 KAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ 156 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 344455555555555555555555555555542 4455555555555555555444444444433
No 158
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.72 E-value=3.2e-07 Score=54.98 Aligned_cols=66 Identities=8% Similarity=-0.006 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDN-FSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+++++.++.++++.+|.+..+|+..+.+....|. +++++.++.+++..+|+|.-+|.....++...
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999 69999999999999999999999988888776
No 159
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.72 E-value=2.2e-07 Score=56.05 Aligned_cols=65 Identities=6% Similarity=-0.089 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQD-NFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
++|+.++.+++.++|++..+|+..+.++...| .+++++.++..++.++|++..++...+.++...
T Consensus 71 e~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l 136 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 45666666666666666666666666666666 366666666666666666666666665555544
No 160
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.71 E-value=1.4e-07 Score=49.84 Aligned_cols=59 Identities=8% Similarity=-0.006 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 2 YHEAISCYERALTLLN-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
..+++.++..+++.+| ..-++++.+|..++++|+|+.|..+.+.+|++.|+|..+....
T Consensus 59 ~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 59 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 4578999999999998 4589999999999999999999999999999999999776543
No 161
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.70 E-value=3e-07 Score=52.32 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.+|+++++ |+++.+++.+|.+|.. .+++++|+.+|+++++++ ++.++..++.++..
T Consensus 22 ~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 86 (273)
T 1ouv_A 22 FTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYS 86 (273)
T ss_dssp HHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhC
Confidence 4556666666655 4555666666666666 666666666666666554 45555555555443
No 162
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.69 E-value=2.8e-08 Score=55.91 Aligned_cols=69 Identities=25% Similarity=0.296 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--------CCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLL--------NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL--------KPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 64 (79)
++++|+.++++++++. |..+.++..+|.+|..+|++++|+.+|++++.+ +|....++..++.++
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 137 (283)
T 3edt_B 58 KYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC 137 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 4789999999999883 566789999999999999999999999999998 344456666677776
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 138 ~~~g~ 142 (283)
T 3edt_B 138 QNQGK 142 (283)
T ss_dssp HTTTC
T ss_pred HHcCC
Confidence 65543
No 163
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.68 E-value=4.2e-07 Score=54.80 Aligned_cols=70 Identities=11% Similarity=0.077 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhcC
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQ-D-NFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRHG 71 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 71 (79)
+++++.++..++..+|++..+|+..+.++... + ++++++.++.+++.++|+|.-++.....++...+...
T Consensus 105 l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 105 LEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 68999999999999999999999999999998 8 9999999999999999999999999998888877543
No 164
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.68 E-value=1.6e-07 Score=54.28 Aligned_cols=69 Identities=13% Similarity=0.034 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHH---hhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC------HHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERAL---TLLNRSL----STYAGLAYTYHLQDNFSAAITYYHKALWLKPDD------QFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~ 67 (79)
++++|+.+|++++ +..|++. .+++++|.+|..+|++++|+.+|++++.+.++. ..++..++.++...
T Consensus 170 ~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHc
Confidence 5789999999999 5566643 699999999999999999999999999886431 45667777777766
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
|+
T Consensus 250 g~ 251 (293)
T 2qfc_A 250 EY 251 (293)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 165
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.68 E-value=1.1e-07 Score=54.41 Aligned_cols=68 Identities=21% Similarity=0.301 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRS----LSTYAGLAYTYHLQDNFSAAITYYHKALWL------KPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+|+++++.+|++ ..++..+|.++...|++++|+.++++++.+ .|....++..++.++...|
T Consensus 20 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 20 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 97 (338)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc
Confidence 4789999999999999998 478889999999999999999999999887 3333445555666555444
No 166
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.67 E-value=6.6e-08 Score=57.53 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHc-----cC-CCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALW-----LK-PDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~-p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.++++++++.+.. ..+++++|.+|..+|++++|+.+|++++. .+ |....++..++.++...|
T Consensus 199 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 199 QYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG 278 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC
Confidence 4678888888888775433 25788888888888888888888888888 35 666666677777766554
Q ss_pred h
Q 038754 69 R 69 (79)
Q Consensus 69 ~ 69 (79)
+
T Consensus 279 ~ 279 (383)
T 3ulq_A 279 K 279 (383)
T ss_dssp C
T ss_pred C
Confidence 3
No 167
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.67 E-value=5.3e-07 Score=52.14 Aligned_cols=69 Identities=17% Similarity=0.109 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---ccCCCCH----HHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKAL---WLKPDDQ----FCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al---~~~p~~~----~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++..+.. ..+++++|.+|..+|++++|+.+|++++ +..|++. .++.+++.++...
T Consensus 130 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHH
Confidence 4789999999999876543 6799999999999999999999999999 5566654 4556667766654
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
++
T Consensus 210 ~~ 211 (293)
T 2qfc_A 210 SR 211 (293)
T ss_dssp TC
T ss_pred hh
Confidence 43
No 168
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.67 E-value=2e-07 Score=46.36 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=48.2
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 16 LNRSLSTYAGLAYTYHLQDN---FSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+|+++..+..+|.+++..++ ..+|...++++++++|+++.+...++......|+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~ 58 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFR 58 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCC
Confidence 68999999999999987777 7999999999999999999999888887776554
No 169
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.65 E-value=1.9e-07 Score=55.19 Aligned_cols=64 Identities=19% Similarity=0.096 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHccCCCC-HHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNR--SLSTYAGLAYTYHL-----QDNFSAAITYYHKALWLKPDD-QFCTEMLSLALV 65 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~ 65 (79)
.++|...++++++++|+ +..+|..+|..|.+ .|+.+.|..+|+++++++|+. ......+++.+.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~ 250 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALC 250 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHH
Confidence 35788899999999999 77899999999999 499999999999999999975 655555555443
No 170
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.65 E-value=4.1e-08 Score=56.82 Aligned_cols=68 Identities=12% Similarity=0.014 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHhh-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC------HHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTL-------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD------QFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~ 67 (79)
++++|+.+|+++++. .+....+++++|.+|..+|++++|+.++++++.+.+.. ..++..++.++...
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 478999999999952 22345689999999999999999999999999986544 46677788887776
Q ss_pred h
Q 038754 68 G 68 (79)
Q Consensus 68 ~ 68 (79)
|
T Consensus 250 g 250 (293)
T 3u3w_A 250 E 250 (293)
T ss_dssp T
T ss_pred C
Confidence 6
No 171
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.64 E-value=1.5e-07 Score=55.52 Aligned_cols=68 Identities=22% Similarity=0.322 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHhhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHccC------CCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSL----STYAGLAYTYHLQDNFSAAITYYHKALWLK------PDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+|+++++..|.++ .++..+|.++...|++++|+.+|++++.+. |....++..++.++...|
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 101 (406)
T 3sf4_A 24 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 101 (406)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcC
Confidence 47899999999999999884 688999999999999999999999998873 233355556666665544
No 172
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.62 E-value=1e-07 Score=54.44 Aligned_cols=49 Identities=33% Similarity=0.337 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 1 IYHEAISCYERALTL--------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++++|+.+++++++. .|..+.++..+|.+|..+|++++|+.+|++++.+
T Consensus 168 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 168 KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 478999999999998 6777889999999999999999999999999985
No 173
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.61 E-value=1.1e-07 Score=55.57 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD 52 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 52 (79)
++++|+.+|++++++.+.. ..++.++|.+|..+|++++|+.+|++++.+.|+
T Consensus 130 ~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 130 DLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3567777777777766533 456777777777777777777777777776553
No 174
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.61 E-value=8.2e-07 Score=50.50 Aligned_cols=60 Identities=27% Similarity=0.162 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
+++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+.+|++++..+ ++.++..++.++.
T Consensus 58 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 121 (273)
T 1ouv_A 58 LKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYH 121 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH
Confidence 445555555555553 45555555555555 555555555555555542 4444444444444
No 175
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.60 E-value=3.7e-07 Score=53.64 Aligned_cols=59 Identities=20% Similarity=0.066 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLL--NR-SLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+.+|++++... |. .+.+++.+|.++.++|+.++|...|++++..+|+ +.+...|
T Consensus 186 ~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 186 LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 4678888888887544 44 5678888888888888888888888888888888 6555444
No 176
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.58 E-value=8.1e-08 Score=54.85 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--------CCCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLL--------NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL--------KPDDQFCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 64 (79)
++++|+.++++++++. |....++..+|.++...|++++|+.+|++++.+ +|....++..++.++
T Consensus 126 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 205 (311)
T 3nf1_A 126 KYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCY 205 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 4789999999999884 556788999999999999999999999999998 555556677777777
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 206 ~~~g~ 210 (311)
T 3nf1_A 206 LKQGK 210 (311)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 66554
No 177
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.58 E-value=1.1e-06 Score=54.55 Aligned_cols=60 Identities=12% Similarity=0.001 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLS 61 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 61 (79)
++++|...|+++++..|.++.+|..++..+...|++++|...|++++...| +...|..+.
T Consensus 27 ~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p-~~~lw~~~~ 86 (530)
T 2ooe_A 27 PIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HIDLWKCYL 86 (530)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCC-CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC-ChHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999 454554444
No 178
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.58 E-value=5.3e-07 Score=54.79 Aligned_cols=53 Identities=21% Similarity=0.236 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++++|+..+++++.++| ++.+|..+|.++...|++++|+..|++|+.++|.++
T Consensus 292 d~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 292 KTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 57899999999999996 588899999999999999999999999999999876
No 179
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.57 E-value=2.5e-07 Score=51.53 Aligned_cols=64 Identities=22% Similarity=0.086 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCC--CHHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPD--DQFCTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~ 66 (79)
++++|+.+|+++.+ +.++.+++++|.+|.. .+++.+|+.+|++++...|. ++.++..++.++..
T Consensus 68 ~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 68 DYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp CHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 46777888887744 4577888888888876 77888888888888888773 46677777777664
No 180
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.53 E-value=2.7e-07 Score=53.36 Aligned_cols=69 Identities=17% Similarity=0.111 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc---CCCCH----HHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWL---KPDDQ----FCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p~~~----~~~~~l~~~~~~~ 67 (79)
++++|+.+++++++..+.. ..++.++|.+|..+|++++|+.+|++++++ .|.+. .++.+++.++...
T Consensus 130 ~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 4689999999999965432 347999999999999999999999999953 11222 3555666666655
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
++
T Consensus 210 ~~ 211 (293)
T 3u3w_A 210 SR 211 (293)
T ss_dssp TC
T ss_pred hH
Confidence 43
No 181
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.53 E-value=2e-07 Score=50.56 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc---CCCCH----HHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALT------LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL---KPDDQ----FCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p~~~----~~~~~l~~~~~~~ 67 (79)
++++|+..++++++ ..+....++.++|.++..+|++++|+..+++++.+ .|+++ .++..++.++...
T Consensus 41 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~ 120 (203)
T 3gw4_A 41 RFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHF 120 (203)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh
Confidence 47889999999998 44456789999999999999999999999999998 55443 3455556655554
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
|+
T Consensus 121 g~ 122 (203)
T 3gw4_A 121 GD 122 (203)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 182
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.53 E-value=6.4e-07 Score=55.27 Aligned_cols=70 Identities=9% Similarity=-0.068 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCH---HHHHHHHHHH
Q 038754 1 IYHEAISCYERALTL-----LNRSL---STYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQ---FCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~ 64 (79)
+|++|+..+++++++ .|+++ ..+.++|.+|..+|++++|+.++++++.+ .|++| ..+.+++.++
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 392 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY 392 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 478999999999985 45554 67899999999999999999999999976 67887 4456677777
Q ss_pred HHhhhc
Q 038754 65 VDEGRH 70 (79)
Q Consensus 65 ~~~~~~ 70 (79)
...|+.
T Consensus 393 ~~qg~~ 398 (433)
T 3qww_A 393 MGLENK 398 (433)
T ss_dssp HHTTCH
T ss_pred HhccCH
Confidence 776653
No 183
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.51 E-value=2.4e-07 Score=55.19 Aligned_cols=68 Identities=22% Similarity=0.167 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-----cCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNR------SLSTYAGLAYTYHLQDNFSAAITYYHKALW-----LKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.+|.+++++.+. ...++.++|.+|..+|++++|+.+|++++. .+|....+...++.++...|
T Consensus 197 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g 275 (378)
T 3q15_A 197 HYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG 275 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC
Confidence 356677777776665321 235666777777777777777777777776 55555555555666555544
No 184
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.49 E-value=2.3e-07 Score=48.09 Aligned_cols=51 Identities=25% Similarity=0.430 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKP 51 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 51 (79)
++++|+.+++++++..+.. ..++..+|.++...|++++|+..+++++.+.+
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 24 NFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4677888888888775432 24778888888888888888888888887654
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.49 E-value=7.2e-07 Score=55.05 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCHHHHHH
Q 038754 1 IYHEAISCYERALTL-----LNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQFCTEM 59 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~ 59 (79)
+|++|+.++++++++ .|++ ...++++|.+|..+|++++|+..|++|+.+ .|++|.+...
T Consensus 355 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l 426 (433)
T 3qww_A 355 DWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEI 426 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 588999999999975 3555 467999999999999999999999999986 7899866653
No 186
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.49 E-value=4.6e-06 Score=43.70 Aligned_cols=61 Identities=23% Similarity=0.187 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.+|+++.+. .++.+++++|.+|.. .+++++|+.+|+++.+. .++.++..++.++..
T Consensus 41 ~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 41 KQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 45688888888876 588999999999988 88999999999999876 677778888887765
No 187
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.47 E-value=2.1e-07 Score=55.33 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTL------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL------KPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~ 68 (79)
++++|+.++++++++ .|....++..+|.+|..+|++++|+.+|++++.+ .|....++..++.++...|
T Consensus 101 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 180 (411)
T 4a1s_A 101 DYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKG 180 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcC
Confidence 478999999999998 5777899999999999999999999999999998 4455566777777777666
Q ss_pred h
Q 038754 69 R 69 (79)
Q Consensus 69 ~ 69 (79)
+
T Consensus 181 ~ 181 (411)
T 4a1s_A 181 K 181 (411)
T ss_dssp H
T ss_pred c
Confidence 5
No 188
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.47 E-value=6.4e-07 Score=46.38 Aligned_cols=69 Identities=25% Similarity=0.303 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC--C----HHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD--D----QFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~----~~~~~~l~~~~~~~~ 68 (79)
++++|+.+++++++..+.. ..++.++|.++...|++++|+.++++++.+.+. + ..++..++.++...|
T Consensus 64 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g 143 (164)
T 3ro3_A 64 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALG 143 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHcc
Confidence 4789999999999876543 678999999999999999999999999987432 2 244555666655544
Q ss_pred h
Q 038754 69 R 69 (79)
Q Consensus 69 ~ 69 (79)
+
T Consensus 144 ~ 144 (164)
T 3ro3_A 144 N 144 (164)
T ss_dssp C
T ss_pred C
Confidence 3
No 189
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.47 E-value=1.9e-07 Score=55.11 Aligned_cols=52 Identities=25% Similarity=0.416 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC
Q 038754 2 YHEAISCYERALTLLNRSL------STYAGLAYTYHLQDNFSAAITYYHKALWLKPDD 53 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 53 (79)
+++|+.++++++++.+... .++.++|.+|..+|++++|+.+|++++.+.|..
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC
Confidence 5566666666666554332 266666666666666666666666666665433
No 190
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.46 E-value=2.1e-07 Score=55.41 Aligned_cols=69 Identities=13% Similarity=0.264 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHhh---CC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH-------HHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTL---LN---RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ-------FCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~l~~~~~~~ 67 (79)
++++|+.+|++++++ .+ ..+.+++.+|.+|..+|+++.|+.++++++.+.+... .++..++.++...
T Consensus 118 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~ 197 (383)
T 3ulq_A 118 EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDL 197 (383)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHh
Confidence 578999999999997 23 3468999999999999999999999999999854332 4555566666554
Q ss_pred hh
Q 038754 68 GR 69 (79)
Q Consensus 68 ~~ 69 (79)
|+
T Consensus 198 g~ 199 (383)
T 3ulq_A 198 KQ 199 (383)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 191
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.42 E-value=1.7e-06 Score=54.12 Aligned_cols=69 Identities=13% Similarity=0.171 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhhC-----CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCH---HHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLL-----NRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQ---FCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~ 64 (79)
+|++|+..+++++++. |++ ...+.++|.+|..+|++++|+.++++++.+ .|++| ..+.+++.++
T Consensus 324 ~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 403 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTN 403 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999853 444 468999999999999999999999999986 67887 4456677777
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 404 ~~~G~ 408 (490)
T 3n71_A 404 WHAGH 408 (490)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 76654
No 192
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.41 E-value=3.1e-06 Score=44.36 Aligned_cols=56 Identities=21% Similarity=0.182 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|+.+|+++.+. .++.+++++|.+|.. .+++++|+.+|+++.+.. ++.+...+
T Consensus 76 d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l 135 (138)
T 1klx_A 76 DLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGIL 135 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC
T ss_pred cHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 578999999999987 689999999999999 999999999999999984 44444443
No 193
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.41 E-value=3.4e-07 Score=53.41 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC------HHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNR--S----LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD------QFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~ 68 (79)
++++|+.+|++++++.+. + ..++.++|.+|.. |++++|+.+|++++.+.|.. ..++..++.++...|
T Consensus 91 ~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g 169 (307)
T 2ifu_A 91 RMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQ 169 (307)
T ss_dssp CGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcC
Confidence 356777788887777432 1 4577788888877 88888888888888876643 244455555555443
No 194
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.41 E-value=8.7e-07 Score=52.74 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 038754 1 IYHEAISCYERALT-----LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD 52 (79)
Q Consensus 1 ~~~~A~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 52 (79)
++++|+.+++++++ .+|..+.+++++|.++..+|++++|+.++++++.+.+.
T Consensus 237 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 237 DDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 47899999999999 78888999999999999999999999999999998543
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.38 E-value=2.1e-06 Score=41.91 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH-HHHHHHHHHHHhhh
Q 038754 23 YAGLAYTYHLQDNFSAAITYYHKALWLKPDDQF-CTEMLSLALVDEGR 69 (79)
Q Consensus 23 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~l~~~~~~~~~ 69 (79)
.+..|.++...|++++|+..|+++++++|+++. ++..++.++...++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~ 50 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGD 50 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCC
Confidence 367899999999999999999999999999998 99999988887664
No 196
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.36 E-value=2.3e-06 Score=52.66 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCHHHHHH
Q 038754 1 IYHEAISCYERALTL-----LNRSL---STYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQFCTEM 59 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~ 59 (79)
+|++|+.++++++.+ .|++| ..++++|.+|..+|++++|+..|++|+.+ .|++|.....
T Consensus 344 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 344 LLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred cHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 588999999999975 35554 67999999999999999999999999986 7899866544
No 197
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.35 E-value=2.4e-06 Score=53.44 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCHHHHH
Q 038754 1 IYHEAISCYERALTL-----LNRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQFCTE 58 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~ 58 (79)
+|++|+.++++++++ .|++ ...++++|.+|..+|++++|+..|++|+.+ .|++|.+..
T Consensus 366 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 436 (490)
T 3n71_A 366 AYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKD 436 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHH
Confidence 588999999999875 3555 468999999999999999999999999985 789985543
No 198
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.32 E-value=5.1e-07 Score=51.66 Aligned_cols=50 Identities=26% Similarity=0.468 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 038754 2 YHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKP 51 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 51 (79)
+++|+.+++++++..+.. ..++..+|.++...|++++|+.++++++.+.|
T Consensus 199 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 455555665555554321 22556666666666666666666666665544
No 199
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.27 E-value=3.3e-06 Score=49.68 Aligned_cols=70 Identities=11% Similarity=-0.018 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC--CC-CHHHHHHHHHHHHHhhhc
Q 038754 1 IYHEAISCYERALTLLNR--SLSTYAGLAYTYHLQDNFSAAITYYHKALWLK--PD-DQFCTEMLSLALVDEGRH 70 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~~~~~ 70 (79)
+|++|+.+|+++.+..+. ...+++++|.++..+|++++|+.+|++++... |. .+.++..++.++...|+.
T Consensus 150 r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 150 RWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp CHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred CHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 467788888766554311 13589999999999999999999999998654 55 445777778888777654
No 200
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.25 E-value=6.1e-06 Score=50.84 Aligned_cols=69 Identities=6% Similarity=0.010 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHhhC-----CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCCH---HHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLL-----NRS---LSTYAGLAYTYHLQDNFSAAITYYHKALWL-----KPDDQ---FCTEMLSLAL 64 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~ 64 (79)
+|++|+..+++++++. |++ ...+.++|.+|..+|++++|+.++++++.+ .|++| ..+.+++.++
T Consensus 302 ~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~ 381 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQ 381 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHH
Confidence 4789999999999753 455 468999999999999999999999999976 67887 4455677777
Q ss_pred HHhhh
Q 038754 65 VDEGR 69 (79)
Q Consensus 65 ~~~~~ 69 (79)
...|+
T Consensus 382 ~~~g~ 386 (429)
T 3qwp_A 382 LHQGM 386 (429)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 76654
No 201
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.23 E-value=5.6e-06 Score=44.73 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCCHHHHHHHHHHHHHhhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL------KPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~~ 69 (79)
++++|...++.+....+..+.++..+|.++...|++++|+..|++++.+ .|....++..++.++...|+
T Consensus 7 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 7 DYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 4677877555554433367899999999999999999999999999994 33334556666666665543
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.20 E-value=6.7e-06 Score=50.54 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccC
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLK 50 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~ 50 (79)
+++|+.+|+++.+.+ ++.+++++|.+|.. .+++++|+.+|++++..+
T Consensus 383 ~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 383 EQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 445555555555542 45555555555555 555555555555555555
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.19 E-value=1.3e-05 Score=49.21 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQD-----NFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.+|+++.+.+ ++.+++++|.+|. .| ++.+|+.+|+++. |+++.++..++.++..
T Consensus 267 ~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 267 VEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 455666666655433 5666666666655 44 6666666666666 5566555555555543
No 204
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.16 E-value=1.6e-05 Score=46.90 Aligned_cols=68 Identities=15% Similarity=0.046 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC-----HHHHHHHHHHHHHh
Q 038754 1 IYHEAISCYERALTLL--------NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD-----QFCTEMLSLALVDE 67 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~ 67 (79)
++++|+..+++++++. |....++.++|.++...|++++|...+++++.+.|.. ..++..++.+....
T Consensus 108 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~ 187 (373)
T 1hz4_A 108 FLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLAR 187 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHc
Confidence 4678888888888875 3345678889999999999999999999999887752 23344455544443
Q ss_pred h
Q 038754 68 G 68 (79)
Q Consensus 68 ~ 68 (79)
|
T Consensus 188 g 188 (373)
T 1hz4_A 188 G 188 (373)
T ss_dssp T
T ss_pred C
Confidence 3
No 205
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.15 E-value=2.7e-05 Score=47.87 Aligned_cols=61 Identities=11% Similarity=-0.002 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHL----QDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+++|+.+|+++++. .++.+++++|.+|.. .+++++|+.+|++++... ++.++..++.++..
T Consensus 347 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHc
Confidence 56788888888876 578888888888888 788888888888888754 56667777777664
No 206
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.15 E-value=4.1e-06 Score=49.57 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHccCCCC
Q 038754 1 IYHEAISCYERALTLLNRS-LSTYAGLAYTYHL-QDNFSAAITYYHKALWLKPDD 53 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~ 53 (79)
+.++|..+|+++++++|+. ..+++.+|..+.. +|+++.|...+++++..+|..
T Consensus 219 d~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 4689999999999999975 9999999999987 599999999999999998873
No 207
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.13 E-value=9.3e-06 Score=49.87 Aligned_cols=58 Identities=12% Similarity=-0.022 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQ----DNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
++|+.+|+++.+.++.++..++++|.+|... +++++|+.+|+++. |+++.++..++.+
T Consensus 196 ~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 196 AELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHH
Confidence 3444555555555544444444455444333 34444444444444 4444444444443
No 208
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.12 E-value=5.8e-05 Score=45.99 Aligned_cols=67 Identities=9% Similarity=-0.039 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHH--------------------------------------------HHHHcCCHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAY--------------------------------------------TYHLQDNFS 37 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~ 37 (79)
+.+|+.+|+++++++|+++.++..++. ++...|+++
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d 294 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTD 294 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHH
Confidence 356777777777777777666664443 444578999
Q ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 38 AAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 38 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+|+..+++++.++|+ ..++..++.++.-.|+
T Consensus 295 ~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~ 325 (372)
T 3ly7_A 295 ESYQAINTGIDLEMS-WLNYVLLGKVYEMKGM 325 (372)
T ss_dssp HHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCC
Confidence 999999999999975 5555666666655544
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.00 E-value=3.4e-05 Score=41.62 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHccC-C-CCHHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQD---NFSAAITYYHKALWLK-P-DDQFCTEMLSLALVD 66 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~l~~~~~~ 66 (79)
...+...|.+.+..++.+..+.+++|+++.+.+ +.++++..++.+++.+ | ++..+...++-+.-.
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k 83 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 83 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH
Confidence 346778888888889999999999999999999 6679999999999998 7 445555555554433
No 210
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.00 E-value=2.8e-05 Score=46.31 Aligned_cols=58 Identities=14% Similarity=-0.027 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHH
Q 038754 1 IYHEAISCYERALTL----------LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 60 (79)
++++|...++.+++. +|+++.++.++..+...+|+ +|.++++++.+.+|++++....-
T Consensus 226 ~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~ 293 (310)
T 3mv2_B 226 NIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ 293 (310)
T ss_dssp CHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH
Confidence 578999999988887 58899999999999999998 89999999999999999777553
No 211
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.97 E-value=1.1e-05 Score=47.60 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 2 YHEAISCYERALTLLNRS------LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
+++|+..+++++.+.+.. ..++.++|.++..+|++++|+..|++++.+
T Consensus 69 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 69 LTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344455555544443321 122444555555555555555555555544
No 212
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.91 E-value=8e-05 Score=37.15 Aligned_cols=51 Identities=16% Similarity=0.138 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHhhh
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALWLK-------PDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~l~~~~~~~~~ 69 (79)
++.-++.+|..++..++|..|+.+|+.|++.. +..+.++..++.++...|+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~ 61 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGD 61 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccC
Confidence 46778899999999999999999999999863 2345667777877776664
No 213
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.74 E-value=0.00036 Score=41.58 Aligned_cols=51 Identities=10% Similarity=-0.051 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 038754 1 IYHEAISCYERALTLLN--RSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKP 51 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 51 (79)
++++|+.++.+.+..+| .+..++...+.++.++|+.+.|.+.+++..+.+|
T Consensus 115 ~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 115 DLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 46788888988888886 7888888889999999999999999988888888
No 214
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.70 E-value=0.00049 Score=43.37 Aligned_cols=66 Identities=23% Similarity=0.214 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 67 (79)
+..|..+|.+|..+.|++...++.+|.+....|+.-+|+-+|.+++....-++.+..++...+...
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999999998888899999998888764
No 215
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.66 E-value=0.00088 Score=39.28 Aligned_cols=63 Identities=13% Similarity=0.074 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
+.++++......++.+|.|......+...+.-.|+++.|...++.+.+++|+.......+..+
T Consensus 12 ~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 12 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp CHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999987555444444
No 216
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.60 E-value=0.0018 Score=35.07 Aligned_cols=62 Identities=13% Similarity=-0.091 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSL 62 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 62 (79)
+.++|...|+.++.++...+.+|...|..-.++|+...|...+.+++.+.|.+.......-.
T Consensus 75 D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le~a~~ 136 (161)
T 4h7y_A 75 EPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIALR 136 (161)
T ss_dssp CGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHHHHHH
Confidence 46778899999999988899999999999999999999999999999999988755444333
No 217
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.58 E-value=0.00071 Score=42.29 Aligned_cols=57 Identities=9% Similarity=-0.078 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHH
Q 038754 4 EAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLS 61 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 61 (79)
.....|++++...|.++..|..++..+...|+.+.|...|++|+.. |.+...+..++
T Consensus 197 Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~ 253 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYG 253 (493)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999 98875554443
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.55 E-value=0.00062 Score=44.31 Aligned_cols=64 Identities=14% Similarity=0.021 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 5 AISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAI-TYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 5 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
....|++++...|.++..|+.++..+...|+..+|. ..|++|+...|.+...+..+.......+
T Consensus 328 v~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~ 392 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNT 392 (679)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhC
Confidence 456799999999999999999999999999999997 9999999999999866666665555443
No 219
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.54 E-value=9.9e-05 Score=44.17 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC
Q 038754 1 IYHEAISCYERALTLLNRSL-----------------STYAGLAYTYHLQDNFSAAITYYHKALWLKPDD 53 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 53 (79)
+|++|+..|.++++..|... .++..+|.+|..+|++++|+..|.+++.+.+..
T Consensus 19 ~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~ 88 (434)
T 4b4t_Q 19 QYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF 88 (434)
T ss_dssp CHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS
T ss_pred CHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 58899999999999988653 368999999999999999999999999876554
No 220
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00078 Score=44.42 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKA 46 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 46 (79)
+++-|+.+.++++...|.+-.+|+.|+.||..+|+++.|+-.+.-+
T Consensus 352 ~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 352 DYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 5788999999999999999999999999999999999999665554
No 221
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.38 E-value=0.00096 Score=46.99 Aligned_cols=29 Identities=24% Similarity=0.214 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 038754 18 RSLSTYAGLAYTYHLQDNFSAAITYYHKA 46 (79)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 46 (79)
+++.+|+.+|.++...|++++|+..|.++
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA 1131 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA 1131 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 44555555555555555555555555443
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.36 E-value=0.00029 Score=38.56 Aligned_cols=48 Identities=19% Similarity=0.077 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhCCCCH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 2 YHEAISCYERALTLLNRSL---------STYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
|+.|+.....++.+..+++ .++..+|.+++..++|..|...|+++|++
T Consensus 36 Y~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 36 HSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 5667777777666554333 48899999999999999999999999764
No 223
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.34 E-value=0.0012 Score=43.01 Aligned_cols=51 Identities=10% Similarity=-0.025 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD 52 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 52 (79)
++.|..+|+.+++..|+++..|..++......|+.+.|...|++++...|+
T Consensus 486 ~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 486 TKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 568889999999999999999989999888899999999999999998874
No 224
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.29 E-value=0.00063 Score=42.44 Aligned_cols=55 Identities=25% Similarity=0.276 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
+|++|..+|.++ ..|..+|.++.++|++++|+.+|+++ +++.+|.....+....|
T Consensus 137 ~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 137 MYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcC
Confidence 356777777766 46778888888888888888888888 35555655555554443
No 225
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.28 E-value=0.0051 Score=38.46 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=33.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Q 038754 26 LAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVD 66 (79)
Q Consensus 26 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 66 (79)
+..+|.+.|++++|+..+++++.+++.+-..+..++.++..
T Consensus 213 lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 213 LINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 44678888999999999999999999998777777666553
No 226
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.00052 Score=41.05 Aligned_cols=51 Identities=12% Similarity=0.064 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 038754 1 IYHEAISCYERALTLL------NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKP 51 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 51 (79)
+|.+|+.++++++... +....++...|.+|..+|++.+|...|++++.+.+
T Consensus 150 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 150 QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 4678888888887653 33467899999999999999999999999988743
No 227
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.12 E-value=0.0023 Score=45.23 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCC
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDD 53 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 53 (79)
++++|+..|.++ +++..|...|.++.+.|++++|+++|..+.+..+..
T Consensus 1120 ~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1120 MVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred CHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 478899999775 889999999999999999999999999999988654
No 228
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.40 E-value=0.032 Score=29.15 Aligned_cols=48 Identities=13% Similarity=-0.081 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHccC
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSA---AITYYHKALWLK 50 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~~~ 50 (79)
..+...|.+....++.+..+.+++|+++.+.....+ ++..++..++.+
T Consensus 18 ~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~ 68 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG 68 (126)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 456677888888888999999999999999998888 999999999876
No 229
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.19 E-value=0.028 Score=34.18 Aligned_cols=48 Identities=19% Similarity=0.083 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.+++..++.++..+|-+-.+|..+-.++...|+..+|+..|+++-+
T Consensus 186 ~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 186 RASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888999999999999999999999999999999999999988754
No 230
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.10 E-value=0.028 Score=30.73 Aligned_cols=45 Identities=24% Similarity=0.236 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHhhCC-------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLN-------------------------RSLSTYAGLAYTYHLQDNFSAAITYYHK 45 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 45 (79)
.|..|...|+++++... .+.++.|.++.||.+++++++|+..++.
T Consensus 78 eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 78 EYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp CHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 36678888888755331 1137889999999999999999998754
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.06 Score=35.79 Aligned_cols=49 Identities=8% Similarity=-0.077 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
..+..-+..+...|+++.|+.+.++|+.+-|+...+|..+..++...++
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d 386 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEE 386 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhcc
Confidence 4566667778889999999999999999999999999999999988765
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.43 E-value=0.2 Score=31.34 Aligned_cols=52 Identities=8% Similarity=0.028 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHccCCCCHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQD-NFSAAITYYHKALWLKPDDQF 55 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~ 55 (79)
+.|...|.++ +..+.....|...|..-+..+ +++.|...|+.+++..|+++.
T Consensus 303 ~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~ 355 (493)
T 2uy1_A 303 ELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTL 355 (493)
T ss_dssp HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHH
Confidence 4455555555 322223444444444444333 355555666666555555543
No 233
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.1 Score=28.73 Aligned_cols=43 Identities=19% Similarity=0.092 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++.|....+.. ++...|..+|......|+++-|..+|+++=..
T Consensus 21 l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 21 LDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 44555554433 67899999999999999999999999876443
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.99 E-value=0.096 Score=33.18 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhh
Q 038754 22 TYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEG 68 (79)
Q Consensus 22 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 68 (79)
++..+|.+......+..|..+|.+|..+.|++...+..++-+....+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~ 200 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKG 200 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTT
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhccc
Confidence 66778999999999999999999999999999888888877766543
No 235
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=94.98 E-value=0.057 Score=26.11 Aligned_cols=23 Identities=35% Similarity=0.332 Sum_probs=14.5
Q ss_pred HHHHHHcCCHHHHHHHHHHHHcc
Q 038754 27 AYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 27 ~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
|.-.-..|++.+|+.+|..+++.
T Consensus 26 Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 26 AVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHH
Confidence 33445677777777777666653
No 236
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.90 E-value=0.061 Score=25.94 Aligned_cols=19 Identities=37% Similarity=0.491 Sum_probs=12.1
Q ss_pred HHHcCCHHHHHHHHHHHHc
Q 038754 30 YHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 30 ~~~~~~~~~A~~~~~~al~ 48 (79)
.-+.|++.+|+.+|.+++.
T Consensus 21 ~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 21 ADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHH
Confidence 3466777776666666654
No 237
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=94.59 E-value=0.15 Score=24.09 Aligned_cols=40 Identities=13% Similarity=0.099 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 24 AGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 24 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
..+|..+...|++++|..+|-+|+..-|+......-+...
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~t 60 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 60 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 4578899999999999999999999999987555544443
No 238
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=94.55 E-value=0.27 Score=32.10 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhcCC
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRHGI 72 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 72 (79)
.......|...+..|+|..|.....+++..+|+|..++...++++...|....
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 45566778888899999999999999999999999999999999999887653
No 239
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=94.37 E-value=0.29 Score=26.43 Aligned_cols=44 Identities=16% Similarity=-0.058 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 038754 7 SCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLK 50 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 50 (79)
..+...+..++-+|..+..+|.+|.+.|+.++|.....+|.+..
T Consensus 112 ki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 112 EIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 34444455566779999999999999999999999999998754
No 240
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.78 E-value=0.64 Score=28.27 Aligned_cols=48 Identities=17% Similarity=-0.051 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 22 TYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 22 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
+...++.++...|++.+++..+..++..+|-+..++..+-.++...|+
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr 220 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDR 220 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 455677788899999999999999999999998777777777665554
No 241
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=93.25 E-value=0.2 Score=24.64 Aligned_cols=19 Identities=11% Similarity=0.349 Sum_probs=11.0
Q ss_pred HHHcCCHHHHHHHHHHHHc
Q 038754 30 YHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 30 ~~~~~~~~~A~~~~~~al~ 48 (79)
.-..|++.+|+.+|..++.
T Consensus 25 ~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 25 LDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 3455666666666555554
No 242
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.10 E-value=0.2 Score=27.19 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=32.9
Q ss_pred hhCCCCHHHHHHHHHHHHHcCCH------HHHHHHHHHHHccCCC
Q 038754 14 TLLNRSLSTYAGLAYTYHLQDNF------SAAITYYHKALWLKPD 52 (79)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~------~~A~~~~~~al~~~p~ 52 (79)
-..|++++.|..+....-+.|++ +.-+..|++|+..-|-
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp 51 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPP 51 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCG
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCc
Confidence 35799999999999999999999 8999999999987663
No 243
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=92.91 E-value=0.33 Score=24.05 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al 47 (79)
+..+...+..+.+.|+|++||.+.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4566778889999999999988777665
No 244
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.54 E-value=0.27 Score=31.71 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 038754 17 NRSLSTYAGLAYTYHLQDNFSAAITYYHKA 46 (79)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 46 (79)
.+++..|..+|..+.+.++++.|+.+|.++
T Consensus 678 ~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 678 ESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 357899999999999999999999999986
No 245
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.49 E-value=0.79 Score=25.73 Aligned_cols=57 Identities=16% Similarity=-0.021 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHh--hC---------------CCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHH
Q 038754 1 IYHEAISCYERALT--LL---------------NRSLS-TYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCT 57 (79)
Q Consensus 1 ~~~~A~~~~~~~~~--~~---------------~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 57 (79)
+|..|+.++..+++ .+ |.+.+ .+..+|..+.+.|+-++|+..|..++..+|=.+..-
T Consensus 77 dYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 77 DYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp CHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 57889999999983 22 33443 556789999999999999999999999998766544
No 246
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=92.32 E-value=0.26 Score=25.30 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=11.9
Q ss_pred HHHcCCHHHHHHHHHHHHc
Q 038754 30 YHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 30 ~~~~~~~~~A~~~~~~al~ 48 (79)
.-..|++.+|+.+|..++.
T Consensus 28 ~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 28 EDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHH
Confidence 3455777776666666655
No 247
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.34 Score=23.22 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=14.4
Q ss_pred HHHHHcCCHHHHHHHHHHHHcc
Q 038754 28 YTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 28 ~~~~~~~~~~~A~~~~~~al~~ 49 (79)
.-.-..|++++|+.+|..++..
T Consensus 21 v~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 21 IDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHH
Confidence 3344667777777777776653
No 248
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=91.98 E-value=0.32 Score=23.59 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=16.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 26 LAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 26 ~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
.|.-.-..|++++|+.+|..++..
T Consensus 22 ~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 22 RAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334445778888888887777753
No 249
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=91.84 E-value=0.31 Score=24.19 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCCHH
Q 038754 24 AGLAYTYHLQDNFSAAITYYHKALWLKPDDQF 55 (79)
Q Consensus 24 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 55 (79)
..+|..+...|+++.|+.+|-+|+..-|+...
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 35788888999999999999999999887653
No 250
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.37 E-value=0.43 Score=24.54 Aligned_cols=18 Identities=17% Similarity=0.254 Sum_probs=9.0
Q ss_pred HHHcCCHHHHHHHHHHHH
Q 038754 30 YHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 30 ~~~~~~~~~A~~~~~~al 47 (79)
.-..|+.+.|+.+|++.+
T Consensus 32 ~DE~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 32 TDELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHTCHHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHH
Confidence 334466555555554443
No 251
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.55 E-value=0.49 Score=32.17 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=34.1
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 9 YERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.++.+..-|.++..-|.+|.+|...|++++|..+|++|-.
T Consensus 829 a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 829 CMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 3556666788888889999999999999999999998763
No 252
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=89.55 E-value=2.7 Score=26.50 Aligned_cols=28 Identities=11% Similarity=0.185 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al 47 (79)
...|..+-..|.+.|+.++|...|++..
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMV 167 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3334444444444444444444444433
No 253
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.67 E-value=1 Score=28.92 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 2 YHEAISCYERALTLLNRS-------LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
|++|..+..++. .|.+ ..-++.+|.++.-+++|.+|..++..|++.-|.+.
T Consensus 247 y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 247 VDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp STTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 456666666663 3322 45667789999999999999999999999877553
No 254
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.59 E-value=3.2 Score=26.15 Aligned_cols=65 Identities=8% Similarity=0.023 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--CCCCHHHHHHHHHHHHHh
Q 038754 2 YHEAISCYERALTLLN-RSLSTYAGLAYTYHLQDNFSAAITYYHKALWL--KPDDQFCTEMLSLALVDE 67 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~ 67 (79)
.+.|...|++.....- .+..+|..+-..|.+.|++++|+..|++..+. .|+ ...+..+..++...
T Consensus 86 l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd-~~tyn~lI~~~~~~ 153 (501)
T 4g26_A 86 LSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR-LRSYGPALFGFCRK 153 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc-cceehHHHHHHHHC
Confidence 4678888888776652 36888999999999999999999999987764 454 44444444444433
No 255
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.48 E-value=0.97 Score=31.28 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=32.3
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 038754 10 ERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 47 (79)
+..+...|.++...|.+|.++...|++++|..+|+++-
T Consensus 832 ~~l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 832 MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 34455667888888999999999999999999998874
No 256
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=88.14 E-value=1.4 Score=23.21 Aligned_cols=29 Identities=10% Similarity=-0.086 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYT 29 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 29 (79)
+|.+|..+.+.+++..|++..+......+
T Consensus 93 dY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 93 EYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 58899999999999999999887766554
No 257
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=86.83 E-value=2 Score=23.94 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
..-+|-+|..+...++|.+|...+..|++.-|...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 45678899999999999999999999999877653
No 258
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=85.48 E-value=0.58 Score=22.94 Aligned_cols=14 Identities=21% Similarity=0.522 Sum_probs=7.6
Q ss_pred CCHHHHHHHHHHHH
Q 038754 34 DNFSAAITYYHKAL 47 (79)
Q Consensus 34 ~~~~~A~~~~~~al 47 (79)
|+.+.|+.+|++.+
T Consensus 33 G~k~~A~~~YkkGi 46 (89)
T 3eab_A 33 GQKEQAVEWYKKGI 46 (89)
T ss_dssp SSGGGSHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 55555555555544
No 259
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=85.24 E-value=3 Score=22.40 Aligned_cols=50 Identities=12% Similarity=0.056 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 5 AISCYERALTLL--NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 5 A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
+..+|.-+.... ...+..|-..|..+-..|++.+|...|+.+++....+.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 135 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPR 135 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 344555444433 45678888999999999999999999999999887665
No 260
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=84.79 E-value=3.4 Score=25.78 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhC-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 5 AISCYERALTLL-----NRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 5 A~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.+|.+++... ..+...|..+|-.+++.+++.+|+..|-.+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 455566666543 34567778888899999999999999887754
No 261
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=84.28 E-value=3.1 Score=24.91 Aligned_cols=26 Identities=12% Similarity=-0.018 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHH
Q 038754 18 RSLSTYAGLAYTYHLQDNFSAAITYY 43 (79)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~A~~~~ 43 (79)
.+|..+..+|..|..-+++.+|..+|
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 68999999999999999999999887
No 262
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=84.08 E-value=0.22 Score=32.70 Aligned_cols=52 Identities=8% Similarity=0.043 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhhcCC
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGRHGI 72 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 72 (79)
......|...+..|+|+.|....+.++..+|+|..++...++++...|....
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 4455567777789999999999999999999999999999999988876553
No 263
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=81.59 E-value=6 Score=24.02 Aligned_cols=40 Identities=15% Similarity=0.010 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 038754 4 EAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYY 43 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 43 (79)
.|+.|-.+.=...-.+|..+..+|..|.+-+++.+|...|
T Consensus 120 ~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 120 EMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 4555554421223368999999999999999999999887
No 264
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=80.75 E-value=5.8 Score=25.27 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhC-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 5 AISCYERALTLL-----NRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 5 A~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.+|.+++... ..+...|..+|-.+++.+++.+|+..|-.+-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 445566655543 34567778888899999999999999887754
No 265
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=80.21 E-value=6.2 Score=25.03 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhC-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 5 AISCYERALTLL-----NRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 5 A~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.+|.+++... ..+...|..+|-.+++.+++.+|+..|..+-.
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 445555555532 34567778889999999999999999988764
No 266
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=78.51 E-value=7.9 Score=22.67 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHh----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.|++..|+ -+++++.|+...++++.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 457777877775 5666763 3444555554 48999998888777775
No 267
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=77.88 E-value=4.3 Score=19.30 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHcc------CCCCHHHHHHHHHHHHH
Q 038754 24 AGLAYTYHLQDNFSAAITYYHKALWL------KPDDQFCTEMLSLALVD 66 (79)
Q Consensus 24 ~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~ 66 (79)
..+|.=|...|+|+.|+.+|+-+++. .=+|+.....+..+...
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~e 64 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQE 64 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHH
Confidence 45677788999999999999998864 22355444444444443
No 268
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=77.78 E-value=7.4 Score=22.92 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHh-----h--CCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHcc
Q 038754 3 HEAISCYERALT-----L--LNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALWL 49 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~--~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~~ 49 (79)
+.|...|+.+++ + .|.+|- .-.|++..|+ -++++++|+...++|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 345566666553 3 677763 3344555544 689999999988888754
No 269
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=77.11 E-value=8.3 Score=22.18 Aligned_cols=46 Identities=13% Similarity=0.071 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT-----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.+++..|+ -+++++.|+...++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456667777664 5677763 3344455544 48999998888777774
No 270
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=75.73 E-value=7.2 Score=25.51 Aligned_cols=47 Identities=9% Similarity=-0.181 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.|..++..+-......+...|=+|.++..+|+..+|...|+++..
T Consensus 301 ~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 301 RRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 45566666554443334566667777777777888888777777765
No 271
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=75.56 E-value=0.57 Score=27.37 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 25 GLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 25 ~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..|.-+-..|++.+|+.+|..++.+
T Consensus 28 ~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 28 KRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp -------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3344445667777777777777654
No 272
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=74.52 E-value=13 Score=23.34 Aligned_cols=46 Identities=24% Similarity=0.210 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 4 EAISCYERALTLLNR-----------SLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..+..+..++..-|. ...++..+|.+|...+++.+|....++++..
T Consensus 176 ~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 176 QSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 344555666554432 3568899999999999999999999999865
No 273
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=74.15 E-value=9.8 Score=21.61 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH--HHHHHHHHHHHccCCCCH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNF--SAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~A~~~~~~al~~~p~~~ 54 (79)
..|+..|..++..+|.++.-....-.-|....+. .-.+..|+.+...||...
T Consensus 102 r~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A 155 (211)
T 3umh_A 102 RLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKA 155 (211)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHH
Confidence 4678888888888888765555444444433333 337888888888887543
No 274
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=73.95 E-value=13 Score=23.03 Aligned_cols=46 Identities=24% Similarity=0.231 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALTLLNR--------SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
+..+..++.++..-|. ...++..+|.+|...|++++|....++++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 3445556666665442 367889999999999999999999999985
No 275
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=73.45 E-value=14 Score=23.00 Aligned_cols=46 Identities=22% Similarity=0.272 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALTLLNR--------SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
+..+..+..++..-|. ...++..+|.+|...|++.+|....++++.
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3445556666655443 367899999999999999999999999885
No 276
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=72.43 E-value=4.4 Score=22.93 Aligned_cols=38 Identities=11% Similarity=-0.003 Sum_probs=23.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHH
Q 038754 26 LAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLA 63 (79)
Q Consensus 26 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 63 (79)
.-.++.+.|.+++|.+.+++.+.-+|++...+..|...
T Consensus 123 AV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 123 AIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 34457899999999999999998876665444444333
No 277
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=71.62 E-value=13 Score=21.80 Aligned_cols=46 Identities=13% Similarity=0.111 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT-----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.+++..|+ -+++++.|+...++++.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 456677777764 5677763 3344455544 47999998887777764
No 278
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=71.05 E-value=16 Score=22.76 Aligned_cols=47 Identities=17% Similarity=0.104 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 3 HEAISCYERALTLLNR--------SLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
+..+..+..++..-|. ...++..+|.+|...|++.+|....++++..
T Consensus 177 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 177 EQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3445556666655442 3578899999999999999999999999864
No 279
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=68.95 E-value=15 Score=21.41 Aligned_cols=46 Identities=13% Similarity=0.043 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT-----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.|++..|+ -+++++.|....++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666766654 5577763 3344444444 47999998887777654
No 280
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=67.81 E-value=4.8 Score=17.62 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHccCCCCH
Q 038754 36 FSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 36 ~~~A~~~~~~al~~~p~~~ 54 (79)
.+=|++|...++.++|++.
T Consensus 30 leVAiqCi~~aF~v~~~d~ 48 (52)
T 4gof_A 30 LEVAIQCLETAFGVTVEDS 48 (52)
T ss_dssp HHHHHHHHHHHHTCCSSCC
T ss_pred HHHHHHHHHHHcCCCcccc
Confidence 3458999999999999763
No 281
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=67.29 E-value=15 Score=20.98 Aligned_cols=52 Identities=12% Similarity=0.097 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHccCCCCH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFS--AAITYYHKALWLKPDDQ 54 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~~~p~~~ 54 (79)
..|+..|..++...|.++.-....-.-|....+.+ -.+..|+.+...||...
T Consensus 109 r~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~A 162 (219)
T 3pmr_A 109 RAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKA 162 (219)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHHH
Confidence 45778888888888777655554444444433333 37788888888877543
No 282
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=67.07 E-value=1.1 Score=27.67 Aligned_cols=18 Identities=22% Similarity=0.431 Sum_probs=0.0
Q ss_pred HcCCHHHHHHHHHHHHcc
Q 038754 32 LQDNFSAAITYYHKALWL 49 (79)
Q Consensus 32 ~~~~~~~A~~~~~~al~~ 49 (79)
..|+|++|+.+|.+++..
T Consensus 23 ~~g~~~eA~~~Y~~a~~~ 40 (444)
T 2zan_A 23 KAGNYEEALQLYQHAVQY 40 (444)
T ss_dssp ------------------
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 446666666666555543
No 283
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=65.55 E-value=18 Score=21.22 Aligned_cols=46 Identities=13% Similarity=0.071 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT-----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.|++..|+ -+++++.|+...++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456667776654 5577763 3344555544 47999998887777654
No 284
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=64.76 E-value=9.1 Score=20.68 Aligned_cols=49 Identities=8% Similarity=0.064 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 038754 4 EAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPD 52 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 52 (79)
.|...+..+...+|.-....-.+..++....+....+..|...+..||.
T Consensus 74 ~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~ 122 (175)
T 4abx_A 74 EAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPE 122 (175)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 3445555555556555566677777777877777777777777777774
No 285
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=63.42 E-value=23 Score=21.79 Aligned_cols=48 Identities=6% Similarity=-0.071 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 2 YHEAISCYERALTLLN---RSLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++.|.++|.++..... +-...+...-.++...+++..+...+.++-.+
T Consensus 147 ~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 147 KDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3455555555554332 22455555666666666666666666666443
No 286
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=62.79 E-value=15 Score=19.50 Aligned_cols=38 Identities=3% Similarity=0.023 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHH---HHHHHHHHHHccCCCCH
Q 038754 17 NRSLSTYAGLAYTYHLQDNFS---AAITYYHKALWLKPDDQ 54 (79)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~---~A~~~~~~al~~~p~~~ 54 (79)
.-++.+.|++|+++.+..... .++..++..++.+|...
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~ 76 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRR 76 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccch
Confidence 567899999999999988766 59999999999998655
No 287
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=62.71 E-value=16 Score=22.82 Aligned_cols=31 Identities=16% Similarity=-0.003 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
...++..+|.+|...+++++|....++++..
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999864
No 288
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=62.20 E-value=15 Score=24.10 Aligned_cols=36 Identities=8% Similarity=-0.103 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 038754 1 IYHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNF 36 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (79)
+|.-|......++..+|++..+...++.+|.++|--
T Consensus 464 ~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 464 EYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 466788899999999999999999999999888753
No 289
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=61.00 E-value=13 Score=17.98 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=12.0
Q ss_pred HHHHHHHHHHccCCCCHHHHHHH
Q 038754 38 AAITYYHKALWLKPDDQFCTEML 60 (79)
Q Consensus 38 ~A~~~~~~al~~~p~~~~~~~~l 60 (79)
+++..-.++|+-+|+||.....+
T Consensus 28 ~~v~~Ai~~L~~~PsnPa~LAey 50 (85)
T 2ca5_A 28 GELTLALDKLAKNPSNPQLLAEY 50 (85)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHH
Confidence 34444445555677777443333
No 290
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=60.21 E-value=29 Score=21.77 Aligned_cols=46 Identities=24% Similarity=0.270 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALTLLN--------RSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
+..+..++.++..-| ....++..+|.+|...+++++|+...++++.
T Consensus 155 ~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 155 AQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 344555666665544 2356889999999999999999999998874
No 291
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=58.98 E-value=2.5 Score=26.07 Aligned_cols=31 Identities=16% Similarity=0.055 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWLK 50 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 50 (79)
..++..+|..|...|+++.|..+|.++....
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~ 161 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKA 161 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 4578899999999999999999999988753
No 292
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=58.61 E-value=9.4 Score=17.97 Aligned_cols=19 Identities=11% Similarity=0.200 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHccCCCCH
Q 038754 36 FSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 36 ~~~A~~~~~~al~~~p~~~ 54 (79)
.+=|++|...++.++|++.
T Consensus 35 LeVAiqCI~~aF~v~~~d~ 53 (74)
T 2lxb_A 35 LNVAMDCISEAFGFEREAV 53 (74)
T ss_dssp HHHHHHHHHHHHTCCTTTH
T ss_pred HHHHHHHHHHHhCCCchhh
Confidence 3449999999999999985
No 293
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=58.30 E-value=31 Score=21.53 Aligned_cols=30 Identities=33% Similarity=0.287 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..++..+|.+|...|++.+|....++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 568899999999999999999999999854
No 294
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=57.19 E-value=34 Score=21.64 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-CCCC
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL-KPDD 53 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~~ 53 (79)
..-+|-+|..+...++|.+|...+..|++. -|..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 467788999999999999999999999998 6654
No 295
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=55.86 E-value=29 Score=20.49 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=29.2
Q ss_pred HHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 038754 29 TYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLAL 64 (79)
Q Consensus 29 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 64 (79)
.+.+.|...+|+......++-+|.|...+..+-..+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLL 41 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELL 41 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHH
Confidence 356789999999999999999999996665554444
No 296
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=55.30 E-value=42 Score=22.07 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHhhh
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALVDEGR 69 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 69 (79)
.++..++.+......++...-...+.+ .+.|++..|..++.+.-.-.++...+..+++.+....|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~e~~~r~A-lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~ 334 (618)
T 1qsa_A 269 DEQAKWRDDAIMRSQSTSLIERRVRMA-LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGR 334 (618)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHH-HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHhccccCCChHHHHHHHHHH-HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCC
Confidence 355666666555444433333444444 567999999999977655433456666677777666554
No 297
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=55.25 E-value=17 Score=22.43 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=22.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 25 GLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 25 ~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.+|..|+..|++.+|...+.+.++
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~ 127 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLR 127 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 789999999999999999988886
No 298
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=54.79 E-value=27 Score=19.69 Aligned_cols=51 Identities=8% Similarity=-0.069 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 4 EAISCYERALTLL--NRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 4 ~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
++..+|.-+.... ...+..|-.+|..+-..|++.+|...|+.+++....+.
T Consensus 97 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~ 149 (202)
T 3esl_A 97 ESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPY 149 (202)
T ss_dssp HHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 5566666555544 56788889999999999999999999999999987665
No 299
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=53.23 E-value=31 Score=19.92 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHc
Q 038754 3 HEAISCYERALT-----LLNRSLS---TYAGLAYTYH-LQDNFSAAITYYHKALW 48 (79)
Q Consensus 3 ~~A~~~~~~~~~-----~~~~~~~---~~~~~~~~~~-~~~~~~~A~~~~~~al~ 48 (79)
+.|...|+.+++ +.|.+|. .-.|++..|+ -+++++.|....++|+.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666766654 5577763 3344444444 67999998887777664
No 300
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=53.06 E-value=15 Score=16.16 Aligned_cols=29 Identities=24% Similarity=0.112 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
.-+..++.......|...|+..+++++++
T Consensus 21 qK~aK~AiSAL~feDv~tA~~~L~~AL~l 49 (53)
T 2rkl_A 21 QKLAKYAISALNYEDLPTAKDELTKALDL 49 (53)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 34455556666778888888888888764
No 301
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=50.15 E-value=68 Score=23.05 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--CCCCHHHHHHHHHHHHH
Q 038754 1 IYHEAISCYERALTL----LNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWL--KPDDQFCTEMLSLALVD 66 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~ 66 (79)
+.++|...|.+..+. -.-+...|+.+-..|.+.|+.++|...|++-... .|+ ...+..+..++-.
T Consensus 142 ~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-vvTYntLI~glcK 212 (1134)
T 3spa_A 142 QLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-LLSYAAALQCMGR 212 (1134)
T ss_dssp CHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc-HHHHHHHHHHHHh
Confidence 367888888765432 2446889999999999999999999999988764 554 3344444444433
No 302
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=49.82 E-value=46 Score=21.02 Aligned_cols=46 Identities=13% Similarity=0.079 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 4 EAISCYERALTLLNR-----------SLSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..+..++.++..-|. ...++..+|.+|...+++.+|....++++..
T Consensus 155 ~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 155 FILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345556666654442 2578999999999999999999999999864
No 303
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=48.90 E-value=31 Score=18.66 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhhCCCC------HHHH---HHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 2 YHEAISCYERALTLLNRS------LSTY---AGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
|=+|-++++.+....+.. ...+ ...|....+.|+...|...+.+++.
T Consensus 48 yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 48 FHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345667777777776554 2223 3334445678999999999999986
No 304
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=47.45 E-value=39 Score=19.41 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhh-----CCCCH---HHHHHHHHH-HHHcCCHHHHHHHHHHHHcc
Q 038754 3 HEAISCYERALTL-----LNRSL---STYAGLAYT-YHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 3 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~-~~~~~~~~~A~~~~~~al~~ 49 (79)
+.|...|+.++++ .|.+| ..-.|++.. |--+++++.|....++|+.+
T Consensus 142 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 142 EDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4567777777653 34443 455555555 45788999999999999774
No 305
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=46.61 E-value=43 Score=20.43 Aligned_cols=30 Identities=23% Similarity=0.104 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..+++..|......+++.+|+.+++.+...
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 456667777777889999988888877653
No 306
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=46.48 E-value=50 Score=20.43 Aligned_cols=50 Identities=22% Similarity=0.188 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHhhCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 038754 1 IYHEAISCYERALTLLNR--S----LSTYAGLAYTYHLQDNFSAAITYYHKALWLK 50 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 50 (79)
+|.+|...+.++.+--.. + .+++..-..+|..++++..+...|.++....
T Consensus 114 ~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 114 LYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 467887777777663321 1 4567777888999999999999999997653
No 307
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=46.44 E-value=26 Score=17.19 Aligned_cols=8 Identities=38% Similarity=0.493 Sum_probs=3.8
Q ss_pred HccCCCCH
Q 038754 47 LWLKPDDQ 54 (79)
Q Consensus 47 l~~~p~~~ 54 (79)
++.+|+||
T Consensus 43 L~~~psNP 50 (92)
T 2g0u_A 43 LTKNPSDP 50 (92)
T ss_dssp HHHSTTCH
T ss_pred HhcCCCCH
Confidence 34455555
No 308
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=45.98 E-value=45 Score=20.73 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++++...|.++.++|+..+|+..+.++.+
T Consensus 338 aEv~Li~AEA~~~~g~~~~A~~~lN~vR~ 366 (461)
T 3kez_A 338 SEAYLNAAEAAVQTGDNAKAVKYLNSIVQ 366 (461)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCchHHHHHHHHHHH
Confidence 68999999999999999999988877654
No 309
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=45.38 E-value=15 Score=22.67 Aligned_cols=30 Identities=13% Similarity=0.006 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 038754 18 RSLSTYAGLAYTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 47 (79)
+...++..+|.+|...+++++|+...++++
T Consensus 199 tk~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 199 TQAAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp BHHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 345688999999999999999999999887
No 310
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=45.27 E-value=40 Score=19.02 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 038754 18 RSLSTYAGLAYTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 47 (79)
+-+.+.+--+.||.+..++..|+.+++..+
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677778899999999999999999999
No 311
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=45.10 E-value=60 Score=20.99 Aligned_cols=20 Identities=15% Similarity=0.228 Sum_probs=13.8
Q ss_pred HHHHHcCCHHHHHHHHHHHH
Q 038754 28 YTYHLQDNFSAAITYYHKAL 47 (79)
Q Consensus 28 ~~~~~~~~~~~A~~~~~~al 47 (79)
.+|.++|++++|+++|.++-
T Consensus 744 ~~~~~~g~~~~a~~~~~~~~ 763 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKSQ 763 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHcC
Confidence 35666788888888775544
No 312
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=44.77 E-value=11 Score=18.51 Aligned_cols=20 Identities=10% Similarity=0.144 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHccCCCCHH
Q 038754 36 FSAAITYYHKALWLKPDDQF 55 (79)
Q Consensus 36 ~~~A~~~~~~al~~~p~~~~ 55 (79)
.+=|++|+..++.++|++..
T Consensus 47 LEVAIqCI~~AF~Vd~~D~~ 66 (92)
T 4asv_A 47 LNVAMDCISEAFGFEREAVS 66 (92)
T ss_dssp HHHHHHHHHHHHTCCGGGHH
T ss_pred HHHHHHHHHHHhCCCchhhh
Confidence 34499999999999998863
No 313
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=44.57 E-value=17 Score=14.52 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALWLK 50 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 50 (79)
+...|-.-+.+ .-|++|+..|+.+++.+
T Consensus 5 dSDiWDdtALI----KayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 5 DSDIWDDTALI----KAYDKAVASFKHALKNG 32 (37)
T ss_pred chhhhhhHHHH----HHHHHHHHHHHHHHhcC
Confidence 34444444433 34688888888888764
No 314
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=44.47 E-value=45 Score=19.34 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=31.6
Q ss_pred HHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHccCCCCH
Q 038754 3 HEAISCYERAL--TLLNRSLSTYAGLAYTYHLQD--NFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 3 ~~A~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~ 54 (79)
..|+..|..++ ..+|.++.-....-.-|.... +-.-.+..|+++...||...
T Consensus 104 r~Ale~y~~AL~~q~~pP~~~~Vl~aLk~yiRae~KDR~Htl~hy~Hl~~~dpe~A 159 (239)
T 3k66_A 104 RDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRHLLKADSKEA 159 (239)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHHH
Confidence 45788888888 566666543333333343332 33337888888888887543
No 315
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=42.57 E-value=48 Score=19.12 Aligned_cols=63 Identities=16% Similarity=0.053 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhCCCCHH-------HH-HHHHHHHHHcCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLS-------TY-AGLAYTYHLQDNFSAAITYYHKALWLKPDDQFCTEMLSLALV 65 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 65 (79)
+.|+..++.+-+-.+-+.. +. -..-.++.+.|.|++|.+.+++.+.-+|++...+..|...+.
T Consensus 89 ESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~ 159 (235)
T 3bu8_A 89 ESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIR 159 (235)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHh
Confidence 4566666655554432211 11 223344689999999999999999988777655555555444
No 316
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=41.71 E-value=66 Score=20.48 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
..++..+|.+|...+++.+|....+.++..
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 578899999999999999999999999863
No 317
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=41.40 E-value=42 Score=18.14 Aligned_cols=49 Identities=16% Similarity=0.228 Sum_probs=38.5
Q ss_pred HHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 6 ISCYERALT--LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
..+|..+.. +....+..|-.+|..+-..|++.+|...|+.+++....+.
T Consensus 80 ~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~ 130 (164)
T 2wvi_A 80 LDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPL 130 (164)
T ss_dssp HHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 344444444 3345688888999999999999999999999999987665
No 318
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=40.99 E-value=35 Score=17.06 Aligned_cols=30 Identities=13% Similarity=-0.104 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.....-|.-..+.|+|++|...++.+-+
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455666667778899999999988887754
No 319
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=40.80 E-value=51 Score=18.86 Aligned_cols=49 Identities=16% Similarity=0.149 Sum_probs=38.6
Q ss_pred HHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 6 ISCYERALT--LLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
..+|.-+.. +....+..|-.+|..+-..|++.+|...|+.+++....+.
T Consensus 134 ~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 184 (223)
T 4aez_C 134 VELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPF 184 (223)
T ss_dssp HHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSH
T ss_pred HHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 344444444 3345678888999999999999999999999999987764
No 320
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=40.38 E-value=55 Score=20.47 Aligned_cols=45 Identities=16% Similarity=-0.038 Sum_probs=33.9
Q ss_pred HHHHHHHHHhh-CC--------CCHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHcc
Q 038754 5 AISCYERALTL-LN--------RSLSTYAGLAYTYHLQD---------NFSAAITYYHKALWL 49 (79)
Q Consensus 5 A~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~---------~~~~A~~~~~~al~~ 49 (79)
-+..++.++.. -| +...++..+|.+|...+ ++++|....++++..
T Consensus 164 I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 164 IIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 45556666665 33 23678889999998888 899999999999863
No 321
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.98 E-value=66 Score=20.06 Aligned_cols=30 Identities=10% Similarity=-0.109 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++++...|.++.++|+..+|+..+.++.+.
T Consensus 364 AEv~Li~AEA~~~~g~~~~A~~~lN~vR~R 393 (478)
T 3hdx_A 364 EDITLLRAEALCALNRSTEAVSYLNMIRTN 393 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 789999999999999999999988887654
No 322
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=39.89 E-value=42 Score=17.68 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
+..++..|..|...|+.+.|--.|-+.+.+
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 355667788999999999999998886543
No 323
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=39.80 E-value=47 Score=18.23 Aligned_cols=42 Identities=5% Similarity=-0.079 Sum_probs=27.0
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 7 SCYERALTLLNRSLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
..|-.+++...++..-+...-.-+.++|++++|..+..+...
T Consensus 19 ~~~~~~LR~qrHdf~NkLqvI~GLlql~~ydea~~yI~~~~~ 60 (192)
T 1ixm_A 19 NELIHLLGHSRHDWMNKLQLIKGNLSLQKYDRVFEMIEEMVI 60 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344555555555544444444446799999999998877654
No 324
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=39.55 E-value=37 Score=16.91 Aligned_cols=30 Identities=20% Similarity=0.126 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++..+..-+.-..+.|+|++|...++++-+
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455566667777899999999988877754
No 325
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=39.47 E-value=64 Score=19.70 Aligned_cols=28 Identities=14% Similarity=0.031 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.+++..|......+++.+|+.+++.|..
T Consensus 276 ~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 303 (380)
T 3c3r_A 276 NAEYHQSILAKQQKKFGEEIARLQHAAE 303 (380)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3556667777888899999988887765
No 326
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=36.31 E-value=72 Score=19.36 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.+++..|......+++.+++.+++.|..
T Consensus 253 ~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 280 (363)
T 3rau_A 253 VAHLHMGKQAEEQQKFGERVAYFQSALD 280 (363)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHhhhHHHHHHHHHHHHH
Confidence 4566667777778888888887776654
No 327
>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=36.15 E-value=30 Score=17.70 Aligned_cols=16 Identities=31% Similarity=0.364 Sum_probs=13.8
Q ss_pred CCHHHHHHHHHHHHcc
Q 038754 34 DNFSAAITYYHKALWL 49 (79)
Q Consensus 34 ~~~~~A~~~~~~al~~ 49 (79)
++.++|+.+|.+++-.
T Consensus 13 ~d~~~A~~FY~~vfG~ 28 (149)
T 1u6l_A 13 GNCREAFSCYHQHLGG 28 (149)
T ss_dssp SCHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHhCC
Confidence 5899999999999854
No 328
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=35.85 E-value=70 Score=20.06 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++++..+|.++..+|+..+|+..+.++-+.
T Consensus 361 AEvlL~~AEA~~~~g~~~~A~~~lN~VR~R 390 (481)
T 3jq1_A 361 ADVLLMLAEAYMNKGALDTSIGYINQIRRR 390 (481)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCChHHHHHHHHHHHHh
Confidence 789999999999999999999888777654
No 329
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=35.75 E-value=45 Score=16.79 Aligned_cols=30 Identities=20% Similarity=0.074 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++.....-|.-..+.|+|++|...++.+-+
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~ 50 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKE 50 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345555566667789999999988887743
No 330
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=34.61 E-value=50 Score=16.98 Aligned_cols=30 Identities=13% Similarity=0.006 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 19 SLSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++..+..-|.-..+.|+|++|...++.+-+
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e 65 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEAND 65 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455566666777899999999988887743
No 331
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=32.63 E-value=30 Score=17.72 Aligned_cols=14 Identities=14% Similarity=0.354 Sum_probs=12.9
Q ss_pred CCHHHHHHHHHHHH
Q 038754 34 DNFSAAITYYHKAL 47 (79)
Q Consensus 34 ~~~~~A~~~~~~al 47 (79)
|+.++|+++|.+++
T Consensus 14 ~d~~eA~~FY~~~f 27 (139)
T 1tsj_A 14 NQAEEAVKLYTSLF 27 (139)
T ss_dssp SCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHc
Confidence 68899999999998
No 332
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=32.12 E-value=50 Score=16.27 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCCH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALWLKPDDQ 54 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 54 (79)
...+..-|.-+++.++|.+|...|+++..+. +++
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~ 86 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS-DNE 86 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCH
Confidence 4455666777899999999999999998765 444
No 333
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=30.94 E-value=61 Score=19.81 Aligned_cols=28 Identities=7% Similarity=0.026 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.+++..|......+++.+|+.+++.|..
T Consensus 258 ~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 285 (392)
T 1zb1_A 258 LSAYYHGLHLEEENRVGEAIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 3556667777777888888888877763
No 334
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=29.83 E-value=97 Score=18.84 Aligned_cols=30 Identities=13% Similarity=0.027 Sum_probs=25.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHccCCCCHHHH
Q 038754 28 YTYHLQDNFSAAITYYHKALWLKPDDQFCT 57 (79)
Q Consensus 28 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 57 (79)
...++.++|..|..+.++.|+++|....+.
T Consensus 215 ~~a~K~KNy~tAa~fArrLLel~p~~~~a~ 244 (325)
T 3mv2_A 215 SQHFKHKNFLQASYFAGEFLKIISSGPRAE 244 (325)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCSSHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCHHHHH
Confidence 346799999999999999999999776443
No 335
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=29.24 E-value=1.6e+02 Score=21.28 Aligned_cols=54 Identities=13% Similarity=-0.015 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHcc--CCCCH
Q 038754 1 IYHEAISCYERALTLL-NRSLSTYAGLAYTYHLQDN-FSAAITYYHKALWL--KPDDQ 54 (79)
Q Consensus 1 ~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~--~p~~~ 54 (79)
++++|..+|++..+.+ ..|...|..+-.++.+.|+ .++|...+++-... .|+..
T Consensus 180 ~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~v 237 (1134)
T 3spa_A 180 AFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQAL 237 (1134)
T ss_dssp CHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHH
T ss_pred CHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChh
Confidence 4689999999988765 2467888888888999998 47888888887764 45443
No 336
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=28.98 E-value=66 Score=16.64 Aligned_cols=10 Identities=30% Similarity=0.158 Sum_probs=5.3
Q ss_pred HHHHHHHHHH
Q 038754 3 HEAISCYERA 12 (79)
Q Consensus 3 ~~A~~~~~~~ 12 (79)
+++..+++++
T Consensus 7 ee~~~wl~~A 16 (141)
T 3o10_A 7 VEARRWLRQA 16 (141)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4555555555
No 337
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=27.92 E-value=54 Score=15.34 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYH 31 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (79)
+++|+.++.++-..-.+++..|...-.++.
T Consensus 10 ~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~ 39 (80)
T 2cr7_A 10 VEDALTYLDQVKIRFGSDPATYNGFLEIMK 39 (80)
T ss_dssp SCCSHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHH
Confidence 356788888888877778888877766654
No 338
>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=27.76 E-value=40 Score=16.78 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=12.2
Q ss_pred CHHHHHHHHHHHH
Q 038754 35 NFSAAITYYHKAL 47 (79)
Q Consensus 35 ~~~~A~~~~~~al 47 (79)
+.++|+.+|.+++
T Consensus 17 d~~~A~~FY~~~f 29 (136)
T 1u7i_A 17 QAEAAMNFYLSLF 29 (136)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHc
Confidence 8999999999998
No 339
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=27.75 E-value=1.2e+02 Score=20.32 Aligned_cols=28 Identities=14% Similarity=-0.034 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 21 STYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
.+++..|......+++.+|+.+++.|..
T Consensus 261 ~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 288 (704)
T 2xs1_A 261 NAEYHQSILAKQQYYFGEEIARLQHAAE 288 (704)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHhHHHHHHHHHHHHHH
Confidence 4566667777788899999988887764
No 340
>3nqp_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Bacteroides fragilis nctc 9343}
Probab=27.02 E-value=1.2e+02 Score=19.09 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
++++...|.++.++|+..+|...+.++.+
T Consensus 383 AEv~L~~AEA~~~~g~~~~A~~~lN~vR~ 411 (514)
T 3nqp_A 383 PWVYLTLAEIANMEGDNAAVAKYINLVRK 411 (514)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 78999999999999998888887766543
No 341
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.54 E-value=1.3e+02 Score=18.64 Aligned_cols=49 Identities=12% Similarity=0.058 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHh---hCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 038754 1 IYHEAISCYERALT---LLNRSL----STYAGLAYTYHLQDNFSAAITYYHKALWL 49 (79)
Q Consensus 1 ~~~~A~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 49 (79)
++..|...+.++.. ..+.++ ..+...|..+...++|.+|-.+|..++..
T Consensus 192 d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 192 DYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 45677777776532 233333 46677788889999999999999998864
No 342
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.67 E-value=16 Score=24.15 Aligned_cols=37 Identities=11% Similarity=-0.116 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 038754 2 YHEAISCYERALTLLNRSLSTYAGLAYTYHLQDNFSA 38 (79)
Q Consensus 2 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (79)
|.-|..+...++..+|++..+...++.+|.++|--.+
T Consensus 477 ~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 477 YRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 5567778888999999999999999999998887555
No 343
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=23.39 E-value=53 Score=17.57 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=12.8
Q ss_pred CCHHHHHHHHHHHH
Q 038754 34 DNFSAAITYYHKAL 47 (79)
Q Consensus 34 ~~~~~A~~~~~~al 47 (79)
|+-++|+++|..++
T Consensus 15 g~a~eAi~FY~~vF 28 (163)
T 1u69_A 15 SAALEAATFYAETF 28 (163)
T ss_dssp SCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHh
Confidence 68899999999998
No 344
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=23.03 E-value=75 Score=15.28 Aligned_cols=24 Identities=8% Similarity=0.151 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYY 43 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~ 43 (79)
+..|+.=|..|...|++..|+.++
T Consensus 35 A~~Y~~Da~~fl~kGD~v~Ala~i 58 (86)
T 2oo2_A 35 IEAYISDSRYFLEKGDLVRAFECV 58 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 456666677788888888888776
No 345
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=22.76 E-value=76 Score=15.27 Aligned_cols=24 Identities=8% Similarity=0.058 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYY 43 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~ 43 (79)
...|+.=|..|...|++..|+.++
T Consensus 39 A~~Y~~Da~~fl~kGD~v~Ala~i 62 (87)
T 2pmr_A 39 ALNYRDDSVYYLEKGDHITSFGCI 62 (87)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 456666677788888888888776
No 346
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=22.41 E-value=68 Score=14.52 Aligned_cols=14 Identities=21% Similarity=0.337 Sum_probs=11.2
Q ss_pred HcCCHHHHHHHHHH
Q 038754 32 LQDNFSAAITYYHK 45 (79)
Q Consensus 32 ~~~~~~~A~~~~~~ 45 (79)
-.||.++|+.++++
T Consensus 34 ~~GDi~~Ai~~Lr~ 47 (64)
T 2cp9_A 34 CGGDLKQAEIWLHK 47 (64)
T ss_dssp HTSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH
Confidence 45899999998864
No 347
>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0
Probab=21.40 E-value=34 Score=17.53 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=13.1
Q ss_pred CCHHHHHHHHHHHHc
Q 038754 34 DNFSAAITYYHKALW 48 (79)
Q Consensus 34 ~~~~~A~~~~~~al~ 48 (79)
|+-++|+.+|.+++-
T Consensus 19 g~a~eA~~FY~~vFg 33 (138)
T 3oms_A 19 GKAEEAMNFYTSLFD 33 (138)
T ss_dssp SCHHHHHHHHHTTST
T ss_pred CCHHHHHHHHHHHcC
Confidence 688999999998885
No 348
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.16 E-value=1.2e+02 Score=18.90 Aligned_cols=30 Identities=7% Similarity=-0.156 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCCHH-HHHHHHHHHHcc
Q 038754 20 LSTYAGLAYTYHLQDNFS-AAITYYHKALWL 49 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~-~A~~~~~~al~~ 49 (79)
++++...|.++.++|+.. +|...+.++.+.
T Consensus 368 AEvlL~~AEA~~~~g~~~~~A~~~lN~VR~R 398 (481)
T 3iv0_A 368 AGALLLYAEALAALGTNDTKACELLNRVRNR 398 (481)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHh
Confidence 789999999999999877 888877776554
No 349
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=21.01 E-value=1.7e+02 Score=18.52 Aligned_cols=45 Identities=13% Similarity=0.011 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhCCC---------CHHHHHHHHHHHH------HcCCHHHHHHHHHHHHc
Q 038754 4 EAISCYERALTLLNR---------SLSTYAGLAYTYH------LQDNFSAAITYYHKALW 48 (79)
Q Consensus 4 ~A~~~~~~~~~~~~~---------~~~~~~~~~~~~~------~~~~~~~A~~~~~~al~ 48 (79)
.-+..+..++..-|. ...++..+|.+|. ..+++.+|+...++++.
T Consensus 163 ~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 163 WIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 344555566554442 3457788888777 57899999999999984
No 350
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=20.95 E-value=1.5e+02 Score=17.93 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 038754 3 HEAISCYERALTLLNRSLSTYAGLAYTYH 31 (79)
Q Consensus 3 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (79)
+.|++-++--++..|++....+..+.++.
T Consensus 102 DaALERielGLe~~p~s~~L~la~SKILl 130 (346)
T 3qtm_A 102 DAAIERAQLGLDAPGNESRLFLALARAYL 130 (346)
T ss_dssp HHHHHHHHHGGGSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhCCCChhHHHHHHHHHH
Confidence 44555555556667777777777666654
No 351
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=20.71 E-value=1.2e+02 Score=16.54 Aligned_cols=20 Identities=15% Similarity=0.066 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCHHHHHHHH
Q 038754 24 AGLAYTYHLQDNFSAAITYY 43 (79)
Q Consensus 24 ~~~~~~~~~~~~~~~A~~~~ 43 (79)
+.+-|+|.-.|++++|+..-
T Consensus 77 yL~YWIyiGRg~~~eAlDiA 96 (161)
T 2ynq_A 77 YMLYWIYIGRSQSEEALELA 96 (161)
T ss_dssp HHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCchHHHHHHH
Confidence 44568899999999998765
No 352
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=20.32 E-value=1.6e+02 Score=17.99 Aligned_cols=29 Identities=21% Similarity=0.169 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 038754 20 LSTYAGLAYTYHLQDNFSAAITYYHKALW 48 (79)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 48 (79)
..+...++..|...|+...|...++++-.
T Consensus 127 l~i~~~i~~~yl~~~d~~~a~~~l~~~~~ 155 (393)
T 4b4t_O 127 LLIDSEIARTYLLKNDLVKARDLLDDLEK 155 (393)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 45667788889999999999999888864
Done!