Your job contains 1 sequence.
>038762
VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA
TIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF
VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN
TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSW
IRTKSSAIKLGSASWFDFKALVFDNITI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038762
(268 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076591 - symbol:AT3G57790 species:3702 "Arabi... 940 1.8e-94 1
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 211 1.8e-16 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 156 3.8e-16 2
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 206 6.2e-16 1
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 152 1.5e-14 2
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 190 3.1e-14 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 154 4.3e-14 2
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 136 4.4e-14 2
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 136 1.3e-13 2
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 126 1.0e-12 2
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 125 1.4e-12 2
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 110 8.2e-11 2
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 157 3.3e-09 1
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 156 4.6e-09 1
TAIR|locus:2054396 - symbol:PGAZAT "polygalacturonase abs... 99 5.4e-07 2
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 120 1.5e-06 2
TAIR|locus:2103478 - symbol:ADPG1 species:3702 "Arabidops... 107 2.1e-06 2
TAIR|locus:2016314 - symbol:AT1G80170 species:3702 "Arabi... 116 1.3e-05 2
TAIR|locus:2043974 - symbol:AT2G43860 species:3702 "Arabi... 101 1.5e-05 2
TAIR|locus:2196055 - symbol:AT1G02460 species:3702 "Arabi... 127 1.7e-05 1
UNIPROTKB|G5EHE2 - symbol:MGCH7_ch7g36 "Uncharacterized p... 93 1.9e-05 2
TAIR|locus:2088252 - symbol:AT3G14040 species:3702 "Arabi... 93 2.4e-05 2
TAIR|locus:2222657 - symbol:AT5G14650 species:3702 "Arabi... 105 2.4e-05 2
TAIR|locus:504955462 - symbol:AT4G32375 species:3702 "Ara... 125 2.8e-05 1
TAIR|locus:2036581 - symbol:AT1G60590 species:3702 "Arabi... 96 2.9e-05 2
TAIR|locus:2141877 - symbol:AT4G18180 species:3702 "Arabi... 104 5.2e-05 3
TAIR|locus:2034131 - symbol:AT1G65570 species:3702 "Arabi... 98 6.2e-05 2
TAIR|locus:2031953 - symbol:AT1G05650 species:3702 "Arabi... 98 9.7e-05 2
TAIR|locus:2146370 - symbol:AT5G27530 species:3702 "Arabi... 97 0.00012 2
TAIR|locus:2020352 - symbol:AT1G17150 species:3702 "Arabi... 91 0.00013 2
TAIR|locus:2077442 - symbol:AT3G07850 species:3702 "Arabi... 93 0.00016 2
TAIR|locus:2043924 - symbol:AT2G43870 species:3702 "Arabi... 99 0.00017 2
TAIR|locus:2080422 - symbol:AT3G59850 species:3702 "Arabi... 105 0.00018 2
TAIR|locus:2127836 - symbol:AT4G32380 species:3702 "Arabi... 116 0.00018 1
TAIR|locus:2178052 - symbol:AT5G39910 species:3702 "Arabi... 105 0.00020 2
TAIR|locus:2128023 - symbol:AT4G35670 species:3702 "Arabi... 103 0.00067 2
TAIR|locus:2019963 - symbol:AT1G10640 species:3702 "Arabi... 87 0.00077 2
TAIR|locus:2088842 - symbol:AT3G26610 species:3702 "Arabi... 89 0.00085 2
>TAIR|locus:2076591 [details] [associations]
symbol:AT3G57790 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005774 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00532018 RefSeq:NP_567055.1 UniGene:At.28595
ProteinModelPortal:F4J3I0 SMR:F4J3I0 PRIDE:F4J3I0
EnsemblPlants:AT3G57790.1 GeneID:824949 KEGG:ath:AT3G57790
OMA:ITRCHID ArrayExpress:F4J3I0 Uniprot:F4J3I0
Length = 490
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 183/258 (70%), Positives = 200/258 (77%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
V DFGA GDGI+YDT+AIQS IDAC + C+V FP G YLTA + L+S V L++
Sbjct: 37 VTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAKLHLRSGVILDV 96
Query: 73 HEDATLLGGPRIEDY-PEE-SSRWYVVLAENAXXXXXXXXXXXXXQAMKFVVTKNEIKNV 130
E+A LLGGPRIEDY P E SS WYVV+A NA Q KFVV +E KNV
Sbjct: 97 TENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKNV 156
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
MVSWN TGAC GDECRPRLVGF+ NV +WN+ LREPAYWCLHIVRC+NT + D+SI G
Sbjct: 157 MVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCENTSVHDVSILG 216
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKL 250
DFNTPNNDGIDIEDSNNTVITR IDTGDDAICPKTYTGPLYNLTATD WIRTKSSAIKL
Sbjct: 217 DFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDCWIRTKSSAIKL 276
Query: 251 GSASWFDFKALVFDNITI 268
GSASWFDFK LVFDNITI
Sbjct: 277 GSASWFDFKGLVFDNITI 294
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 60/215 (27%), Positives = 96/215 (44%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+FGA GDG +T A + AI P + Q+ PPG++LT + L SH TL I + A
Sbjct: 60 EFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGA 119
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENAXXXXXXXXXXXXXQAMKFVVTKNE--IKNVMVSW 134
T+L +YP + +A V+T N I W
Sbjct: 120 TILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGT-NLTDVVITGNNGTINGQGKYW 178
Query: 135 ---NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
+G G RP + + +NV + N+ + + W +H V C+N ++ ++I
Sbjct: 179 WVKYRSGGFKGIT-RPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAP 237
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++PN DGI+ + NT+I + +GDD I K+
Sbjct: 238 IDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKS 272
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 156 (60.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F N+ V +V L+ +W LH V C N + ++I ++ N DGID + S
Sbjct: 181 RPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSS 240
Query: 206 NNTVITRVQIDTGDDAICPKT---YTGPLYNLTATDSWIR--TKSS---AIKLGSASWFD 257
+N I I TGDD + K+ G YN + D IR T SS I +GS +
Sbjct: 241 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPFAGIAIGSETSGG 300
Query: 258 FKALVFDNITI 268
+ + +NIT+
Sbjct: 301 IQNVTVENITL 311
Score = 102 (41.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ---VRFPPGEYLTATIRLKSHVTLNIH 73
+ DFGA GDG +T A SAID N + + P G YLT + L SH+TL +
Sbjct: 47 ISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYLA 106
Query: 74 EDATLLGGPRIEDYP 88
+ A + E +P
Sbjct: 107 DGAVIKAVQDTEKWP 121
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 206 (77.6 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 67/264 (25%), Positives = 111/264 (42%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
DFGA GDG +T A ++AI + Q+ PPG++LT + L SH TL I A
Sbjct: 49 DFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGA 108
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENAXXXXXXXXXXXXXQAMKFVVTKNE--IKNV-MVS 133
T+L ++P + + V+T N I
Sbjct: 109 TILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYW 168
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
W+ RP L+ L +N+ + N+ L + W +H V C++ ++ +++
Sbjct: 169 WDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVT 228
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATD-SWIRTK 244
PN DGI+ + NT+I I +GDD I K+ + P L+ + I K
Sbjct: 229 VPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPK 288
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
S+ + LGS K + +++T+
Sbjct: 289 SAGVALGSEMSGGIKDVRIEDVTL 312
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 152 (58.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN T R L+ N+ + N+ L +W +H V C N IR+M+I N
Sbjct: 199 WNRTLV----HTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMN 254
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
PN DGID + S N I I++GDD + K+
Sbjct: 255 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 287
Score = 93 (37.8 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFG GDG +TAA + A+ Q+ P G +L+ + L S+ TL +
Sbjct: 74 ITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLER 133
Query: 75 DATLLGGPRIEDYP 88
A +LG ++++P
Sbjct: 134 GALILGSKDLDEWP 147
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 190 (71.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 74/257 (28%), Positives = 111/257 (43%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPP-GNKP-CQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFGA GDG +T A Q+A+ +K Q+ PPG +LT + L SH+TL + +
Sbjct: 45 ITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTLFLEK 104
Query: 75 DATLLGGPRIEDYPEESSRWYVVLA-----ENAXXXXXXXXXXXXXQAMKFVVTKNEIKN 129
DA +L ++ S W V A + VV +
Sbjct: 105 DAVILAS-------QDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGT 157
Query: 130 V----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDNTFIR 184
+ +V W+ + S + RP LV F+ NV V N+ L PAY +H V C N +I
Sbjct: 158 IDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAY-TIHSVYCRNLYIH 216
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI-----CPK---TYTGPLYNLTA 236
++ +P GI + S N I I+ G DAI C + +Y P N+
Sbjct: 217 RVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQI 276
Query: 237 TDSWIRTKS-SAIKLGS 252
+ ++R S S+I GS
Sbjct: 277 RNVYLRAASGSSISFGS 293
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 154 (59.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
V WN + + RP L+ F + + + NV + +W +H V C N I ++I
Sbjct: 162 VWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAP 221
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTATDSWIR--TKSS 246
++PN DGID + S N I I TGDD + K+ G Y +++ IR T SS
Sbjct: 222 QDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSS 281
Query: 247 ---AIKLGSASWFDFKALVFDNITI 268
I +GS + K ++ ++IT+
Sbjct: 282 PFAGIAIGSETSGGIKNIIAEHITL 306
Score = 85 (35.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFG GDG +T A ++AI + + PPG YLT + L SH+TL + +
Sbjct: 43 ITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAK 102
Query: 75 DATL 78
A +
Sbjct: 103 GAVI 106
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 136 (52.9 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN-TPNNDGIDIED 204
R LV + ++ + N+ +R+ +W LH C N IR+++I PN DGID +
Sbjct: 223 RGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDS 282
Query: 205 SNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSA-IKLGSASW 255
+ VI I TGDDAI K+ Y P N+ + +R+ SA + +GS
Sbjct: 283 CEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMS 342
Query: 256 FDFKALVFDNITI 268
+ +N+ I
Sbjct: 343 GGISNVTIENLLI 355
Score = 110 (43.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPP-GNKPC--QVRFPPGEYLTATIRLKSHVTLNIHED 75
DFG GDG +T A + A+ + G Q+ PPG +LTA L SH+TL + ED
Sbjct: 91 DFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLAED 150
Query: 76 ATLLGGPRIED 86
+ +LG +ED
Sbjct: 151 SEILG---VED 158
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 136 (52.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 42/133 (31%), Positives = 59/133 (44%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD-FNTPNNDGIDIED 204
R LV + ++ N+ LR+ +W LH C N I +M+I F PN DGID +
Sbjct: 201 RGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDS 260
Query: 205 SNNTVITRVQIDTGDDAICPK--------TYTGPLYNLTATDSWIRTKSSA-IKLGSASW 255
+ +I I GDD I K TY P N+ + IR+ SA I +GS
Sbjct: 261 CEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEMS 320
Query: 256 FDFKALVFDNITI 268
+ +NI I
Sbjct: 321 GGVSNITVENILI 333
Score = 105 (42.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIHEDA 76
DFGA GDG+ +T A + AI K Q+ PPG +LTA L S++TL + E+A
Sbjct: 70 DFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSENA 129
Query: 77 TLL 79
+L
Sbjct: 130 EIL 132
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 126 (49.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP LV + + + N+ +W +H V C + +++++I +PN DG+D + S
Sbjct: 178 RPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSS 237
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N I I TGDD + K+
Sbjct: 238 TNVCIEDCYIVTGDDLVSIKS 258
Score = 108 (43.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPP-GNKPCQVRF-PPGEYLTATIRLKSHVTLNIHE 74
+ +FGA GDG+ +T A Q+A+ +K F P G++LT + L SH+TL + +
Sbjct: 45 ITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
Query: 75 DATLLGGPRIEDYP 88
AT+LG E++P
Sbjct: 105 GATILGSTSSENWP 118
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 125 (49.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ ++G GDG +T A QSA+D + Q+ P G++LT + L SH TL +H+
Sbjct: 47 ITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHK 106
Query: 75 DATLLGGPRIEDYP 88
DA LL + +YP
Sbjct: 107 DAILLAAQDLNEYP 120
Score = 108 (43.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ + + + N+ + W +H V N ++ ++I +PN DGI+ +
Sbjct: 180 RPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSC 239
Query: 206 NNTVITRVQIDTGDDAICPKT 226
NT I I +GDD I K+
Sbjct: 240 TNTRIEDCYIISGDDCIAVKS 260
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 110 (43.8 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ + + + N+ W +H V N +I+ ++I PN DGI+ +
Sbjct: 203 RPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGLTILAPVTVPNTDGINPDSC 262
Query: 206 NNTVITRVQIDTGDDAICPKT 226
NT I I +GDD I K+
Sbjct: 263 TNTRIEDCYIVSGDDCIAVKS 283
Score = 109 (43.4 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPP-GNKPCQVRF-PPGEYLTATIRLKSHVTLNIHEDA 76
+FGA GDG+ +TAA + A+ + + F P G +LT L SH TL +H DA
Sbjct: 72 EFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHFTLFLHRDA 131
Query: 77 TLLGGPRIEDY 87
+L DY
Sbjct: 132 VILASQEESDY 142
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 157 (60.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 71/273 (26%), Positives = 112/273 (41%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPP-GNKP-CQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFGA GDG +T A Q+A+ +K Q+ PPG +LT + L SH+TL +
Sbjct: 45 ITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLEN 104
Query: 75 DATLLGGPRIEDYPEESSRWYVV-----LAENAXXXXXXXXXXXXXQAMKFVVTKNEIKN 129
A ++ ++ S W VV + VV +
Sbjct: 105 GAVIVAS-------QDPSHWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGT 157
Query: 130 V----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDNTFIR 184
+ +V W+ + S RP L+ FL NV V N+ L PAY ++ + + +I
Sbjct: 158 IDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAY-SIYSIYSSHVYIH 216
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTA 236
+ + +P GI + S+ I I+ G DAI K+ Y+ P N+
Sbjct: 217 KILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHI 276
Query: 237 TDSWIRTKS-SAIKLGSASWFDFKALVFDNITI 268
+ ++R S S+I GS +V DN I
Sbjct: 277 RNVYLRGASGSSISFGSEMSGGISDVVVDNAHI 309
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 156 (60.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 62/225 (27%), Positives = 102/225 (45%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPP-GNKP-CQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++FGA GDG +T A Q+A+ +K Q+ PPG++LT + L SH+TL + +
Sbjct: 42 ILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEK 101
Query: 75 DATLLGGPRIEDYPEESSRWYVVLAENAXXXXXXXXXXXXXQAMKFVVTKNEIKNVMVSW 134
AT+L P + S W VV + + + N I V+
Sbjct: 102 GATILASP-------DPSHWDVV---SPLPSYGRGIELPGKRYRSLINGDNLIDVVITGE 151
Query: 135 NHT----GAC------SG--DECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDNT 181
N T GA SG + RP ++ F+ +++ + N+ L PA +H V C
Sbjct: 152 NGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAI-NIHPVYCSQI 210
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
IR + I ++P+ G+ + S+N I I+ G DA+ K+
Sbjct: 211 HIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKS 255
>TAIR|locus:2054396 [details] [associations]
symbol:PGAZAT "polygalacturonase abscission zone A.
thaliana" species:3702 "Arabidopsis thaliana" [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS;IDA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] [GO:0009830 "cell wall
modification involved in abscission" evidence=RCA;TAS] [GO:0009901
"anther dehiscence" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010227 "floral organ abscission" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
EMBL:AC002339 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
ProtClustDB:PLN02218 GO:GO:0004650 GO:GO:0009901 GO:GO:0009830
GO:GO:0010047 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AY078936 EMBL:AF083793 IPI:IPI00518873 PIR:H84846
RefSeq:NP_850359.1 UniGene:At.42781 ProteinModelPortal:Q8RY29
SMR:Q8RY29 STRING:Q8RY29 EnsemblPlants:AT2G41850.1 GeneID:818785
KEGG:ath:AT2G41850 GeneFarm:30 TAIR:At2g41850 InParanoid:Q8RY29
OMA:QINDITC PhylomeDB:Q8RY29 Genevestigator:Q8RY29 GO:GO:0010227
Uniprot:Q8RY29
Length = 433
Score = 99 (39.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P + F +++ V N+++R + I +C N + ++ + ++PN DGI I ++
Sbjct: 192 PTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQ 251
Query: 207 NTVITRVQIDTGDDAI 222
N ++ I TGDD I
Sbjct: 252 NIRVSESIIGTGDDCI 267
Score = 83 (34.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKS--HVTLNIH 73
V DFGAKGDG DT A +A N + P G YL +I+L + L +
Sbjct: 70 VSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILTVQ 129
Query: 74 EDATLLGGPRIEDYPEESSRW 94
TL + DY ++ S+W
Sbjct: 130 IFGTLSASQKRSDY-KDISKW 149
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 120 (47.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
W H G+ RP + F C N+ + + + +HI C+ I + I +
Sbjct: 131 WEHKGS------RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPES 184
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY 232
+PN DGID+ S+N VI I TGDD I + T ++
Sbjct: 185 SPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIH 223
Score = 55 (24.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPG 55
V FGA GDG+ D+ A A +A G Q P G
Sbjct: 26 VTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAG 64
>TAIR|locus:2103478 [details] [associations]
symbol:ADPG1 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS;IDA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009830
"cell wall modification involved in abscission" evidence=RCA;TAS]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0010047 "fruit
dehiscence" evidence=IMP] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005737 GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AF037367 EMBL:AJ002532
EMBL:AL133248 EMBL:AK117942 EMBL:BT005376 IPI:IPI00526588
PIR:T46187 RefSeq:NP_191310.1 UniGene:At.26895
ProteinModelPortal:O23147 SMR:O23147 STRING:O23147 CAZy:GH28
PaxDb:O23147 PRIDE:O23147 EnsemblPlants:AT3G57510.1 GeneID:824918
KEGG:ath:AT3G57510 GeneFarm:24 TAIR:At3g57510 eggNOG:COG5434
HOGENOM:HOG000237792 InParanoid:O23147 KO:K01184 OMA:KNVVYKN
PhylomeDB:O23147 ProtClustDB:PLN02218 Genevestigator:O23147
GO:GO:0004650 GO:GO:0009901 GO:GO:0009830 GO:GO:0010047
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 Uniprot:O23147
Length = 431
Score = 107 (42.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P + +N+NV N+R++ + I +C+ + ++ I ++PN DGI I ++
Sbjct: 192 PTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQ 251
Query: 207 NTVITRVQIDTGDDAI 222
N ++ I TGDD I
Sbjct: 252 NIRVSNSDIGTGDDCI 267
Score = 68 (29.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHV-TL-NIH 73
V +FGAKGDG DT A + A N P G+ YL + R + +L N
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRGPCKSLRNFQ 129
Query: 74 EDATLLGGPRIEDYPEESSRWYVV 97
TL + DY ++ + W ++
Sbjct: 130 ILGTLSASTKRSDY-KDKNHWLIL 152
>TAIR|locus:2016314 [details] [associations]
symbol:AT1G80170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009322 EMBL:AY046002
EMBL:AY142668 IPI:IPI00518842 PIR:D96833 RefSeq:NP_565232.1
UniGene:At.11620 ProteinModelPortal:Q94AJ5 SMR:Q94AJ5 IntAct:Q94AJ5
STRING:Q94AJ5 EnsemblPlants:AT1G80170.1 GeneID:844357
KEGG:ath:AT1G80170 GeneFarm:519 TAIR:At1g80170 InParanoid:Q94AJ5
OMA:KWLYFHG PhylomeDB:Q94AJ5 ProtClustDB:PLN02793
Genevestigator:Q94AJ5 Uniprot:Q94AJ5
Length = 444
Score = 116 (45.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
NH+ C G P + F C+N+ V N+ + + + + C I + + +
Sbjct: 168 NHSNPCRG---APTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATS 224
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAI 222
PN DGI I S VI + TGDD I
Sbjct: 225 PNTDGIHISVSRGIVIDNTTVSTGDDCI 252
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 19 DFGAKGDGIHYDTAAIQSA 37
+FGAKG+G+ DT A A
Sbjct: 57 NFGAKGNGVTDDTKAFADA 75
>TAIR|locus:2043974 [details] [associations]
symbol:AT2G43860 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ056577 IPI:IPI00540510 PIR:D84871 RefSeq:NP_181914.1
UniGene:At.53113 ProteinModelPortal:O22818 SMR:O22818 PRIDE:O22818
EnsemblPlants:AT2G43860.1 GeneID:818990 KEGG:ath:AT2G43860
GeneFarm:16 TAIR:At2g43860 InParanoid:O22818 OMA:CASANPT
PhylomeDB:O22818 ProtClustDB:CLSN2912911 Genevestigator:O22818
Uniprot:O22818
Length = 405
Score = 101 (40.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
F G N+ + + + + I +N I + + D N+PN DGI +E S++ IT
Sbjct: 158 FSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHIT 217
Query: 212 RVQIDTGDDAICPKTYTGPLYNLTATDSWIRT----KSSAIKLGSASWFDFKALVFDNIT 267
+I TGDD I GP +T+ +I+T I +GS + + V DN+T
Sbjct: 218 NSRIGTGDDCIS----IGP----GSTNVFIQTIRCGPGHGISIGSLGRAEEEQGV-DNVT 268
Query: 268 I 268
+
Sbjct: 269 V 269
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATI 62
V+ +GAK DG T A +A D AC N P + P G +L +
Sbjct: 35 VLSYGAKPDGSKDSTKAFLAAWDVACASAN-PTTIIVPKGRFLVGNL 80
>TAIR|locus:2196055 [details] [associations]
symbol:AT1G02460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 EMBL:AC022521
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
HSSP:O74213 EMBL:BT023462 IPI:IPI00548187 PIR:B86155
RefSeq:NP_563654.1 UniGene:At.49842 ProteinModelPortal:Q9FWX5
SMR:Q9FWX5 EnsemblPlants:AT1G02460.1 GeneID:839443
KEGG:ath:AT1G02460 TAIR:At1g02460 InParanoid:Q9FWX5 OMA:CVSIGSG
PhylomeDB:Q9FWX5 ProtClustDB:CLSN2687622 Genevestigator:Q9FWX5
Uniprot:Q9FWX5
Length = 491
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/260 (25%), Positives = 100/260 (38%)
Query: 20 FGAKGDGIHYDTAAIQSAIDA-CPPGNKPCQVRFPPGEY---LTATI---RLKSHVTLNI 72
+GA GDG DT A ++A D+ C N V P Y + +TI +S+ +
Sbjct: 94 YGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGYTFMIQSTIFTGPCRSYQFFQV 153
Query: 73 HEDATLLGGPRIEDYPEESSR--WYVVLAENAXXXXXXXXXXXXXQAMKFVVTKNEIKNV 130
D T++ E +P S+ W V N Q + K ++V
Sbjct: 154 --DGTIVTPDGPESWPSNISKRQWLVFYRVNGMALKGEGVIDGRGQKWWDLPCKPH-RSV 210
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
S TG C P + F N+ V ++++ + C + + I
Sbjct: 211 NKSAIVTGPCDS----PIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITA 266
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC--PKTYTGPLYNLTATDSWIRTKSSAI 248
+PN DGI IE+SN+ I I GDD + +Y + NLT I
Sbjct: 267 PPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPG-----GHGI 321
Query: 249 KLGSASWFDFKALVFDNITI 268
+GS + +A V NIT+
Sbjct: 322 SIGSLGNHNSRACV-SNITV 340
>UNIPROTKB|G5EHE2 [details] [associations]
symbol:MGCH7_ch7g36 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 EMBL:CM000230 EMBL:CM001237
RefSeq:XP_003721480.1 EnsemblFungi:MGG_09608T0 GeneID:2680613
KEGG:mgr:MGG_09608 Uniprot:G5EHE2
Length = 715
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 154 GCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRV 213
G N V V +R+ ++W + V+ + ++ ++ + F NDG+D+ +S + R
Sbjct: 464 GTTNFRVDGVLVRDSSFWGVVAVQSEGVYMVNLKVLNRFGITQNDGVDVCESTRVTVRRS 523
Query: 214 QIDTGDDAICPKTY---TG----------PLYNLTATDSWIRTKSSAIKLGSASW 255
DD+ KT+ TG PL ++ D T+ K+G W
Sbjct: 524 IAVAKDDSFSTKTWPEDTGTTVPYPYAPRPLADVVFEDCLAWTECFGYKVGEGVW 578
Score = 80 (33.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF-PPGEYLTATIRLKSHVTLNIHED 75
V+D A G +T IQSA+DA G +P + + PPG YLT + L S +L +
Sbjct: 342 VLDHKADDTGASLNTG-IQSALDAA--GARPGSIVYVPPGLYLTGNLVLPSRTSLYLAGG 398
Query: 76 ATLLGGPRIEDY 87
A L + DY
Sbjct: 399 AVLRFTGVMADY 410
>TAIR|locus:2088252 [details] [associations]
symbol:AT3G14040 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB019229
UniGene:At.22234 ProtClustDB:CLSN2684911 IPI:IPI00524959
RefSeq:NP_188020.1 UniGene:At.48657 ProteinModelPortal:Q9LVJ4
SMR:Q9LVJ4 STRING:Q9LVJ4 PRIDE:Q9LVJ4 EnsemblPlants:AT3G14040.1
GeneID:820618 KEGG:ath:AT3G14040 TAIR:At3g14040 InParanoid:Q9LVJ4
OMA:NICSASG PhylomeDB:Q9LVJ4 Genevestigator:Q9LVJ4 Uniprot:Q9LVJ4
Length = 445
Score = 93 (37.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 132 VSWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
++W +C P + F G N + ++ + ++I+ C N + D+ I
Sbjct: 173 LAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGID 232
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ N DGI I SN + +I TGDD +
Sbjct: 233 APPESLNTDGIHIGRSNGVNLIGAKIKTGDDCV 265
Score = 74 (31.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 21 GAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLK 65
GAKGDG D+AA +A +AC G+ + P GEYL ++ K
Sbjct: 77 GAKGDGKTDDSAAFAAAWKEACAAGST---ITVPKGEYLVESLEFK 119
>TAIR|locus:2222657 [details] [associations]
symbol:AT5G14650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL163792
IPI:IPI00547360 PIR:T48638 RefSeq:NP_196969.1 UniGene:At.31902
ProteinModelPortal:Q9LYJ5 SMR:Q9LYJ5 STRING:Q9LYJ5 PRIDE:Q9LYJ5
EnsemblPlants:AT5G14650.1 GeneID:831317 KEGG:ath:AT5G14650
TAIR:At5g14650 InParanoid:Q9LYJ5 OMA:NYINIKG PhylomeDB:Q9LYJ5
ProtClustDB:CLSN2916713 Genevestigator:Q9LYJ5 Uniprot:Q9LYJ5
Length = 435
Score = 105 (42.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
V WN +P + F G V V + ++ L C + + D +
Sbjct: 156 VWWNDMMGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSP 215
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLG 251
++PN DGI +++S + VI R + GDD I +T + N+ D I +G
Sbjct: 216 GDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNI-NIHDVDCG---PGHGISIG 271
Query: 252 SASWFDFKALVFDNITI 268
+ KA V NIT+
Sbjct: 272 GLGKDNTKACV-SNITV 287
Score = 60 (26.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAID-AC 41
V+D GAKGDG DT A + A AC
Sbjct: 53 VLDHGAKGDGTSDDTKAFEDAWQVAC 78
>TAIR|locus:504955462 [details] [associations]
symbol:AT4G32375 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00531203 RefSeq:NP_680757.1 UniGene:At.54578
ProteinModelPortal:F4JUA4 SMR:F4JUA4 PRIDE:F4JUA4
EnsemblPlants:AT4G32375.1 GeneID:829372 KEGG:ath:AT4G32375
OMA:KPPTMFP Uniprot:F4JUA4
Length = 486
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 146 RPRLVGFLGCRNVNVWN--VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RPR +GF G N+ ++N ++ P + I+ C N + + + ++PN DGIDI
Sbjct: 107 RPRTIGFSGSSNI-LYNGLTQMNSPKNH-ISILDCTNVTLSNFHLIAPKDSPNTDGIDIA 164
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGPLYNLTAT 237
SNN I I TGDD I G Y++ T
Sbjct: 165 HSNNIRIFNSSIQTGDDCIA---INGGSYDINIT 195
>TAIR|locus:2036581 [details] [associations]
symbol:AT1G60590 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0016556
"mRNA modification" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC002292 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 HSSP:P26213
IPI:IPI00529839 PIR:B96631 RefSeq:NP_564758.2 UniGene:At.27368
ProteinModelPortal:O22699 SMR:O22699 EnsemblPlants:AT1G60590.1
GeneID:842353 KEGG:ath:AT1G60590 TAIR:At1g60590 InParanoid:O22699
OMA:PANGSRH PhylomeDB:O22699 ProtClustDB:CLSN2680767
Genevestigator:O22699 Uniprot:O22699
Length = 540
Score = 96 (38.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 29/123 (23%), Positives = 52/123 (42%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
+P + F G +V V + ++ L C + D+++ ++PN DGI ++++
Sbjct: 274 KPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNT 333
Query: 206 NNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
+ +I + GDD I +T +Y I +GS KA V N
Sbjct: 334 RDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCG----PGHGISIGSLGKDSTKACV-SN 388
Query: 266 ITI 268
IT+
Sbjct: 389 ITV 391
Score = 72 (30.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 17 VIDFGAKGDGIHYDTAAIQSA-IDAC 41
V+DFGAKGDG+ DT A ++A AC
Sbjct: 125 VLDFGAKGDGMSDDTQAFEAAWASAC 150
>TAIR|locus:2141877 [details] [associations]
symbol:AT4G18180 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 CAZy:GH28 HOGENOM:HOG000237792
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161548 IPI:IPI00532207 PIR:E85204 RefSeq:NP_193552.1
UniGene:At.54387 ProteinModelPortal:Q9M0M1 SMR:Q9M0M1 PRIDE:Q9M0M1
EnsemblPlants:AT4G18180.1 GeneID:827543 KEGG:ath:AT4G18180
TAIR:At4g18180 InParanoid:Q9M0M1 OMA:HIALVEC PhylomeDB:Q9M0M1
ProtClustDB:PLN02188 ArrayExpress:Q9M0M1 Genevestigator:Q9M0M1
Uniprot:Q9M0M1
Length = 414
Score = 104 (41.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 132 VSWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
++W S C+ P + F+G V + ++ + +V C + ++I
Sbjct: 137 LAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNIT 196
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI IE S+N +R I TGDD +
Sbjct: 197 APSDSPNTDGIHIERSSNVYFSRSHIATGDDCV 229
Score = 53 (23.7 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 17 VIDFGAKGDGIHYD-TAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVT 69
V FGA+ + H D T A +A D AC + + P GE+ ++R T
Sbjct: 37 VRSFGARAND-HRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCT 90
Score = 37 (18.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 234 LTATDSWIRTKSSAIK--LGSASWFDFKALVFDNIT 267
++ T + IR K+ A L +A+ F+ ++ +N+T
Sbjct: 275 ISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVT 310
>TAIR|locus:2034131 [details] [associations]
symbol:AT1G65570 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GO:GO:0009506 GO:GO:0005576
GO:GO:0005975 CAZy:GH28 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 EMBL:AC001229
EMBL:DQ446397 IPI:IPI00540193 PIR:F96680 RefSeq:NP_176735.1
UniGene:At.52380 ProteinModelPortal:O04474 PRIDE:O04474
EnsemblPlants:AT1G65570.1 GeneID:842868 KEGG:ath:AT1G65570
TAIR:At1g65570 InParanoid:O04474 OMA:ITIIMSH PhylomeDB:O04474
ProtClustDB:CLSN2913520 ArrayExpress:O04474 Genevestigator:O04474
Uniprot:O04474
Length = 397
Score = 98 (39.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
F+ NV + V + + I RC N I D+ I +PN DGI I+ S + +
Sbjct: 156 FMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVR 215
Query: 212 RVQIDTGDDAI 222
I TGDD I
Sbjct: 216 NASIKTGDDCI 226
Score = 63 (27.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA-TIRL-----KSH-VT 69
V+ FGA +GI A A DA + P G YL + +R KS +T
Sbjct: 33 VLSFGANPNGIVESAKAFSDAWDAACGVEDSVVIYVPKGRYLVSGEVRFEGESCKSREIT 92
Query: 70 LNIHEDATLLGGPRIEDYPEESSRWY 95
L I D TL+G P+ + W+
Sbjct: 93 LRI--DGTLIG-PQDYSLLGKKENWF 115
>TAIR|locus:2031953 [details] [associations]
symbol:AT1G05650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 IPI:IPI00525299 PIR:F86190 RefSeq:NP_172056.1
UniGene:At.51492 ProteinModelPortal:Q9SYK6 SMR:Q9SYK6 PaxDb:Q9SYK6
PRIDE:Q9SYK6 EnsemblPlants:AT1G05650.1 GeneID:837072
KEGG:ath:AT1G05650 TAIR:At1g05650 InParanoid:Q9SYK6 OMA:TRNFLIS
PhylomeDB:Q9SYK6 ProtClustDB:PLN02155 Genevestigator:Q9SYK6
Uniprot:Q9SYK6
Length = 394
Score = 98 (39.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 141 SGDECRP--RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
SG C P R + F ++V + V+ + + C N +R++ + ++PN D
Sbjct: 137 SGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTD 196
Query: 199 GIDIEDSNNTVITRVQIDTGDDAI 222
G ++ S +T + TGDD +
Sbjct: 197 GFTVQFSTGVTLTGSTVQTGDDCV 220
Score = 61 (26.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLNI 72
V+ FGAK DG+ TAA A V P G +L I KS +T +
Sbjct: 30 VVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSKITFQV 89
>TAIR|locus:2146370 [details] [associations]
symbol:AT5G27530 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00518530 RefSeq:NP_198105.2 UniGene:At.55039
ProteinModelPortal:F4K4C2 EnsemblPlants:AT5G27530.1 GeneID:832813
KEGG:ath:AT5G27530 OMA:CKSTSIK PhylomeDB:F4K4C2 Uniprot:F4K4C2
Length = 458
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/81 (32%), Positives = 37/81 (45%)
Query: 155 CRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQ 214
C N+ + + + + I C I ++I N+PN DGIDI S N I
Sbjct: 171 CNNLTINGITSIDSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVNIFDST 230
Query: 215 IDTGDDAICPKTYTGPLYNLT 235
I TGDD I T + + N+T
Sbjct: 231 IQTGDDCIAINTGSSSI-NIT 250
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF-PPGE-YLTATIRLKS---HVTLN 71
V+ FGA+GDG D+ A A +A G + F P G+ YL I K ++
Sbjct: 55 VLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFIPSGKTYLLQPIEFKGPCKSTSIK 114
Query: 72 IHEDATLLGGPRIEDYPEESSRWYV 96
+ D ++ I + S+ ++
Sbjct: 115 LQLDGIIVAPSNITSWSNPKSQTWI 139
>TAIR|locus:2020352 [details] [associations]
symbol:AT1G17150 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 OMA:ISNTHIS
IPI:IPI00546751 RefSeq:NP_173158.1 UniGene:At.51644
ProteinModelPortal:F4I650 SMR:F4I650 PRIDE:F4I650
EnsemblPlants:AT1G17150.1 GeneID:838286 KEGG:ath:AT1G17150
Uniprot:F4I650
Length = 402
Score = 91 (37.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 133 SWNHTGACSGDECRPRL---VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
SW+ C D P+L +GF +N ++ + + + D+ I ++I
Sbjct: 136 SWSLID-CQKDNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNII 194
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
N+PN DGI I S+N I+ I TGDD I
Sbjct: 195 APSNSPNTDGIKIALSSNMQISNTHISTGDDCI 227
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVT--LNIH 73
V +GAKGDG +T A +A DAC N P ++ P G + + ++
Sbjct: 35 VRSYGAKGDGKMDNTNAFTNAWKDACR-WNGPSKMYIPLGTFYLGGVTFVGPCDGKISFV 93
Query: 74 EDATLLGGPRIEDYPEE 90
D TLL P +D +E
Sbjct: 94 IDGTLLAPPNNDDIKKE 110
>TAIR|locus:2077442 [details] [associations]
symbol:AT3G07850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
KO:K01213 GO:GO:0047911 EMBL:X72292 EMBL:AY056173 EMBL:AY091200
IPI:IPI00544320 PIR:S34200 RefSeq:NP_187442.1 UniGene:At.22234
ProteinModelPortal:P49063 SMR:P49063 STRING:P49063 PaxDb:P49063
PRIDE:P49063 ProMEX:P49063 EnsemblPlants:AT3G07850.1 GeneID:819976
KEGG:ath:AT3G07850 GeneFarm:575 TAIR:At3g07850 InParanoid:P49063
OMA:AIAIRIN PhylomeDB:P49063 ProtClustDB:CLSN2684911
Genevestigator:P49063 GermOnline:AT3G07850 Uniprot:P49063
Length = 444
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 132 VSWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
++W +C P + F G N + ++ + ++I+ C N + D+ I
Sbjct: 172 LAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGID 231
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ N DGI I SN + +I TGDD +
Sbjct: 232 APPESLNTDGIHIGRSNGVNLIGAKIKTGDDCV 264
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 21 GAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLK 65
GAKGD D+AA +A +AC G+ + P GEY+ ++ K
Sbjct: 76 GAKGDSKTDDSAAFAAAWKEACAAGST---ITVPKGEYMVESLEFK 118
>TAIR|locus:2043924 [details] [associations]
symbol:AT2G43870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ446620 IPI:IPI00544593 PIR:E84871 RefSeq:NP_181915.1
UniGene:At.53114 HSSP:P26509 ProteinModelPortal:O22817 SMR:O22817
EnsemblPlants:AT2G43870.1 GeneID:818991 KEGG:ath:AT2G43870
TAIR:At2g43870 InParanoid:O22817 OMA:KTTWFTG PhylomeDB:O22817
ProtClustDB:CLSN2716978 ArrayExpress:O22817 Genevestigator:O22817
Uniprot:O22817
Length = 384
Score = 99 (39.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 141 SGDECRP--RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
SG C +GF NV V + + + I C+N ++ + + N+PN D
Sbjct: 132 SGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTD 191
Query: 199 GIDIEDSNNTVITRVQIDTGDDAI 222
GI ++ S++ I +I TGDD +
Sbjct: 192 GIHVQSSSSVSIFNTKISTGDDCV 215
Score = 57 (25.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
V+ FGAK DG T A + ++P + P G +L ++
Sbjct: 23 VLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSV 68
>TAIR|locus:2080422 [details] [associations]
symbol:AT3G59850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
ProtClustDB:CLSN2716978 EMBL:BT015766 EMBL:BT020180 IPI:IPI00538167
RefSeq:NP_191544.2 UniGene:At.34545 ProteinModelPortal:Q5XF50
STRING:Q5XF50 EnsemblPlants:AT3G59850.1 GeneID:825155
KEGG:ath:AT3G59850 TAIR:At3g59850 InParanoid:Q5XF50 OMA:WAKACAS
PhylomeDB:Q5XF50 Genevestigator:Q5XF50 Uniprot:Q5XF50
Length = 388
Score = 105 (42.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 141 SGDECRPRL--VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
SG C +GF RNV + + + + I C N + + + D N+PN D
Sbjct: 134 SGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTD 193
Query: 199 GIDIEDSNNTVITRVQIDTGDDAI 222
GI ++ S+ I +I TGDD +
Sbjct: 194 GIHVQSSSTVSILNSKISTGDDCV 217
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 17 VIDFGAKGDGIHYDTAAIQSA-IDACPPGNKPCQVRFPPGEYLTATI 62
++ +GAK DG T A AC KP + P G +L +I
Sbjct: 25 ILSYGAKPDGKTDSTKAFTVLWAKACA-SVKPVTILVPKGRFLLRSI 70
>TAIR|locus:2127836 [details] [associations]
symbol:AT4G32380 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00542951 RefSeq:NP_194964.2 UniGene:At.50389
ProteinModelPortal:F4JUA6 SMR:F4JUA6 EnsemblPlants:AT4G32380.1
GeneID:829373 KEGG:ath:AT4G32380 OMA:INANFPI Uniprot:F4JUA6
Length = 354
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 144 ECRPRLVGFLGCRNVNVWN--VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
+ RP V F GC+N+ ++N ++ P + I+ +N + ++ + ++PN DGID
Sbjct: 44 QSRPVAVRFFGCQNI-LYNGLTQINSPRNH-ITILDSNNATLSNLHLIAPASSPNTDGID 101
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTAT 237
I S N I I TGDD + K + YN+ T
Sbjct: 102 ISHSQNINIMSSTIKTGDDCVAIKRNS---YNINVT 134
>TAIR|locus:2178052 [details] [associations]
symbol:AT5G39910 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00530705 RefSeq:NP_198807.1
UniGene:At.55265 ProteinModelPortal:F4KFW5
EnsemblPlants:AT5G39910.1 GeneID:833988 KEGG:ath:AT5G39910
OMA:NISRISC Uniprot:F4KFW5
Length = 373
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RPR V NV++ N+ +++ + + + ++ ++I D ++PN DGI I+ S
Sbjct: 145 RPRGVVISHSSNVHISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRS 204
Query: 206 NNTVITRVQIDTGDDAI 222
N ++ I TGDD I
Sbjct: 205 QNVIVYDSNIRTGDDCI 221
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAI-DAC 41
V+++GA GDG D+ A + A D C
Sbjct: 38 VLNYGAIGDGFSDDSKAFKDAWEDTC 63
>TAIR|locus:2128023 [details] [associations]
symbol:AT4G35670 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00518919 RefSeq:NP_195292.2
UniGene:At.54617 ProteinModelPortal:F4JN47 SMR:F4JN47
EnsemblPlants:AT4G35670.1 GeneID:829719 KEGG:ath:AT4G35670
OMA:DSTNINI Uniprot:F4JN47
Length = 394
Score = 103 (41.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP + C N+ + + + + I C+ I +++++ +PN DGIDI DS
Sbjct: 143 RPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDS 202
Query: 206 NNTVITRVQIDTGDDAI 222
N I I TGDD I
Sbjct: 203 TNINIFDSTIQTGDDCI 219
Score = 47 (21.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 17 VIDFGAKGDGIHYDTAA-IQSAIDAC 41
V++F AKGDG D+ A +Q+ AC
Sbjct: 26 VLNFDAKGDGQTDDSEAFLQAWTAAC 51
>TAIR|locus:2019963 [details] [associations]
symbol:AT1G10640 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00531466
RefSeq:NP_563875.6 UniGene:At.16555 ProteinModelPortal:F4I5U6
SMR:F4I5U6 PRIDE:F4I5U6 EnsemblPlants:AT1G10640.1 GeneID:837607
KEGG:ath:AT1G10640 OMA:HSTTLAC Uniprot:F4I5U6
Length = 532
Score = 87 (35.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 19/81 (23%), Positives = 38/81 (46%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
+P + F G V V + ++ L C + D+++ ++PN DGI ++++
Sbjct: 267 KPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNT 326
Query: 206 NNTVITRVQIDTGDDAICPKT 226
+ +I + GDD I +T
Sbjct: 327 KDVLIHSTTLACGDDCISIQT 347
Score = 68 (29.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 17 VIDFGAKGDGIHYDTAAIQSA-IDACPPGNKPCQVRFPPGEY 57
V+DFGAKGDG DT A ++A + AC V P EY
Sbjct: 121 VMDFGAKGDGKCDDTKAFEAAWVAAC---KIEASVMLVPPEY 159
>TAIR|locus:2088842 [details] [associations]
symbol:AT3G26610 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:X98130
EMBL:AB028611 EMBL:AK117620 IPI:IPI00530630 RefSeq:NP_189293.1
UniGene:At.37184 ProteinModelPortal:Q38958 SMR:Q38958
EnsemblPlants:AT3G26610.1 GeneID:822270 KEGG:ath:AT3G26610
TAIR:At3g26610 InParanoid:Q38958 OMA:QWLNFKW PhylomeDB:Q38958
ProtClustDB:CLSN2684866 Genevestigator:Q38958 Uniprot:Q38958
Length = 470
Score = 89 (36.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
+P + F NV V ++ + L D + +++I N+PN DGI ++++
Sbjct: 192 KPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIHLQNT 251
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N I I GDD + +T
Sbjct: 252 RNVEIQHSNIACGDDCVSIQT 272
Score = 64 (27.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDA-CPP-GNKPCQVRFPPG-EYLTATIRL----KSHVT 69
+ +GAKGDG+ D+ A+ A A C G K V P G ++L + L K
Sbjct: 69 IFSYGAKGDGVSDDSKALVGAWKAACKVVGGK---VEIPAGTQFLVKAVTLQGPCKEETV 125
Query: 70 LNIHEDATLLGGPRIEDYPEESS-RW 94
+ I + L+ +I +P S +W
Sbjct: 126 VQI--EGILVAPEKIGSWPNSSLFQW 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 241 0.00094 113 3 11 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 621 (66 KB)
Total size of DFA: 225 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.30u 0.10s 19.40t Elapsed: 00:00:01
Total cpu time: 19.30u 0.10s 19.40t Elapsed: 00:00:01
Start: Thu May 9 16:39:00 2013 End: Thu May 9 16:39:01 2013