BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038762
(268 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224137954|ref|XP_002322693.1| predicted protein [Populus trichocarpa]
gi|222867323|gb|EEF04454.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/255 (80%), Positives = 220/255 (86%), Gaps = 2/255 (0%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV DFGA GDGIHYDT AIQS I++CP P K C V FPPG YLTATI LKS+V LNI
Sbjct: 14 SVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGIYLTATIHLKSNVVLNIQ 73
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
E ATLLGG ++EDYP+E +RWYVVLAENA+DVGITGGGVVDGQ +KFV NE KNVMVS
Sbjct: 74 EGATLLGGTKLEDYPKEFNRWYVVLAENASDVGITGGGVVDGQGLKFVKRFNERKNVMVS 133
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN TGAC GDECRPRLVGF+GC NV VWNVRL EPAYWCLHIV+C NT I D+SIYGDFN
Sbjct: 134 WNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIYGDFN 193
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSA 253
+PNNDGIDIEDSNNT+ITR IDTGDDAICPKTYTGP+YNLTATD WIRTKSSAIKLGSA
Sbjct: 194 SPNNDGIDIEDSNNTLITRCHIDTGDDAICPKTYTGPIYNLTATDCWIRTKSSAIKLGSA 253
Query: 254 SWFDFKALVFDNITI 268
SWF+FK LVFDNITI
Sbjct: 254 SWFEFKGLVFDNITI 268
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/253 (79%), Positives = 213/253 (84%), Gaps = 1/253 (0%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV DFGA G+G YDT IQS IDACPP C V+FPPG+YLTATI LKS V L I +
Sbjct: 42 SVTDFGATGNGHDYDTVPIQSTIDACPP-TTTCHVKFPPGKYLTATIHLKSKVVLEIQKG 100
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
ATLLGG R+EDYP+E SRWYVVLAENA+DVGITGGG VDGQ KFV +E+KNVMVSWN
Sbjct: 101 ATLLGGTRMEDYPKEFSRWYVVLAENASDVGITGGGAVDGQGSKFVKRFSEVKNVMVSWN 160
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
TGAC GDECRPRLVGF+GC NV V NV L EPAYWCLHIVRC NT I D+SIYGDFNTP
Sbjct: 161 QTGACLGDECRPRLVGFIGCTNVRVSNVSLTEPAYWCLHIVRCQNTSIHDVSIYGDFNTP 220
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSASW 255
NNDG+DIEDSNNT ITR +IDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIK GSASW
Sbjct: 221 NNDGVDIEDSNNTAITRCRIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKFGSASW 280
Query: 256 FDFKALVFDNITI 268
FDFK LVFDNITI
Sbjct: 281 FDFKNLVFDNITI 293
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/256 (73%), Positives = 212/256 (82%), Gaps = 1/256 (0%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
H+ SV D+GA GDG+HYDTAAIQ+ IDAC Q+RFPPG YLTAT+ +KS V L +
Sbjct: 37 HLFSVADYGAIGDGLHYDTAAIQATIDACHSAGGG-QIRFPPGTYLTATVYIKSGVYLVV 95
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
E A +LGG ++EDYPEES RWYV+LAENATDVGITGGGV+DG MKFV E KNVMV
Sbjct: 96 EEGAKILGGTKLEDYPEESRRWYVLLAENATDVGITGGGVIDGHGMKFVKRFEEAKNVMV 155
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
SWN TGAC GDECRPRLVGFLGCRNV VWN+RL EPAYWCLH+V C+NT I D+SIYGDF
Sbjct: 156 SWNETGACLGDECRPRLVGFLGCRNVRVWNIRLNEPAYWCLHLVGCNNTSIHDVSIYGDF 215
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGS 252
NTPNNDGIDIEDSNNTVITR I TGDD+ICPKT GPLYNLT T+ W+R++SSAIKLGS
Sbjct: 216 NTPNNDGIDIEDSNNTVITRCSISTGDDSICPKTSNGPLYNLTVTNCWLRSRSSAIKLGS 275
Query: 253 ASWFDFKALVFDNITI 268
S++DFK LVFDNITI
Sbjct: 276 GSFYDFKGLVFDNITI 291
>gi|297820578|ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
gi|297324010|gb|EFH54431.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/259 (74%), Positives = 213/259 (82%), Gaps = 6/259 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
SV DFGA GDGI+YDT+A+QS IDAC + C+V FP G YLTA + L+S V L+
Sbjct: 35 SVTDFGATGDGINYDTSAVQSTIDACNRHYTSSSSICRVTFPSGNYLTAKLHLRSGVVLD 94
Query: 72 IHEDATLLGGPRIEDY--PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ E+A LLGGPRIEDY E SS WYVV+A NATDVGITGGG +DGQ KFVV +E KN
Sbjct: 95 VTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKN 154
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
VMVSWN TGAC GDECRPRLVGF+ RNV +WN+ LREPAYWCLHIVRC+NT + D+SI
Sbjct: 155 VMVSWNQTGACLGDECRPRLVGFVDSRNVEIWNITLREPAYWCLHIVRCENTSVHDVSIL 214
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIK 249
GDFNTPNNDGIDIEDSNNTVITR IDTGDDAICPKTYTGPLYNLTATD WIRTKSSAIK
Sbjct: 215 GDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDCWIRTKSSAIK 274
Query: 250 LGSASWFDFKALVFDNITI 268
LGSASWFDFK LVFDNITI
Sbjct: 275 LGSASWFDFKGLVFDNITI 293
>gi|17473561|gb|AAL38256.1| putative protein [Arabidopsis thaliana]
gi|28059069|gb|AAO29984.1| putative protein [Arabidopsis thaliana]
Length = 325
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/259 (74%), Positives = 212/259 (81%), Gaps = 6/259 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
SV DFGA GDGI+YDT+AIQS IDAC + C+V FP G YLTA + L+S V L+
Sbjct: 36 SVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAKLHLRSGVILD 95
Query: 72 IHEDATLLGGPRIEDY--PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ E+A LLGGPRIEDY E SS WYVV+A NATDVGITGGG +DGQ KFVV +E KN
Sbjct: 96 VTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKN 155
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
VMVSWN TGAC GDECRPRLVGF+ NV +WN+ LREPAYWCLHIVRC+NT + D+SI
Sbjct: 156 VMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCENTSVHDVSIL 215
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIK 249
GDFNTPNNDGIDIEDSNNTVITR IDTGDDAICPKTYTGPLYNLTATD WIRTKSSAIK
Sbjct: 216 GDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDCWIRTKSSAIK 275
Query: 250 LGSASWFDFKALVFDNITI 268
LGSASWFDFK LVFDNITI
Sbjct: 276 LGSASWFDFKGLVFDNITI 294
>gi|18410809|ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332646180|gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 490
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/259 (74%), Positives = 212/259 (81%), Gaps = 6/259 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
SV DFGA GDGI+YDT+AIQS IDAC + C+V FP G YLTA + L+S V L+
Sbjct: 36 SVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAKLHLRSGVILD 95
Query: 72 IHEDATLLGGPRIEDY--PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ E+A LLGGPRIEDY E SS WYVV+A NATDVGITGGG +DGQ KFVV +E KN
Sbjct: 96 VTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKN 155
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
VMVSWN TGAC GDECRPRLVGF+ NV +WN+ LREPAYWCLHIVRC+NT + D+SI
Sbjct: 156 VMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCENTSVHDVSIL 215
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIK 249
GDFNTPNNDGIDIEDSNNTVITR IDTGDDAICPKTYTGPLYNLTATD WIRTKSSAIK
Sbjct: 216 GDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDCWIRTKSSAIK 275
Query: 250 LGSASWFDFKALVFDNITI 268
LGSASWFDFK LVFDNITI
Sbjct: 276 LGSASWFDFKGLVFDNITI 294
>gi|4678268|emb|CAB41176.1| putative protein [Arabidopsis thaliana]
Length = 614
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/259 (74%), Positives = 212/259 (81%), Gaps = 6/259 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
SV DFGA GDGI+YDT+AIQS IDAC + C+V FP G YLTA + L+S V L+
Sbjct: 36 SVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAKLHLRSGVILD 95
Query: 72 IHEDATLLGGPRIEDY--PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ E+A LLGGPRIEDY E SS WYVV+A NATDVGITGGG +DGQ KFVV +E KN
Sbjct: 96 VTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKN 155
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
VMVSWN TGAC GDECRPRLVGF+ NV +WN+ LREPAYWCLHIVRC+NT + D+SI
Sbjct: 156 VMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREPAYWCLHIVRCENTSVHDVSIL 215
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIK 249
GDFNTPNNDGIDIEDSNNTVITR IDTGDDAICPKTYTGPLYNLTATD WIRTKSSAIK
Sbjct: 216 GDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLYNLTATDCWIRTKSSAIK 275
Query: 250 LGSASWFDFKALVFDNITI 268
LGSASWFDFK LVFDNITI
Sbjct: 276 LGSASWFDFKGLVFDNITI 294
>gi|357509809|ref|XP_003625193.1| Polygalacturonase [Medicago truncatula]
gi|355500208|gb|AES81411.1| Polygalacturonase [Medicago truncatula]
Length = 482
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/254 (73%), Positives = 215/254 (84%), Gaps = 2/254 (0%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRLKSHVTLNIHE 74
SV ++GA GDGIHYDT +IQ+AID+CP + PC++ FP PG YLTATI L+S V LN+
Sbjct: 49 SVTEYGAIGDGIHYDTVSIQTAIDSCP-YSIPCRITFPSPGNYLTATIFLRSGVVLNVEP 107
Query: 75 DATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
AT+LGGPR +DYP+ESSRWYVVLAENATDVGI GGGVVDGQA KFVV NE KNVMVSW
Sbjct: 108 GATILGGPRQKDYPKESSRWYVVLAENATDVGIAGGGVVDGQAEKFVVRYNERKNVMVSW 167
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
N TG C GDECRPRL+GFLGC+NV V+NV L +PAYWCLH+VR +N I+D++IYGD N
Sbjct: 168 NQTGDCLGDECRPRLIGFLGCKNVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNI 227
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSAS 254
PNNDGIDIEDSNNTVITR IDTGDDAICPK+ TGP++NLT T+SWIR+KSSAIK GSAS
Sbjct: 228 PNNDGIDIEDSNNTVITRCHIDTGDDAICPKSSTGPVHNLTVTNSWIRSKSSAIKFGSAS 287
Query: 255 WFDFKALVFDNITI 268
WF+FK VFDNITI
Sbjct: 288 WFEFKHFVFDNITI 301
>gi|356572058|ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
Length = 466
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/254 (74%), Positives = 211/254 (83%), Gaps = 2/254 (0%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRLKSHVTLNIHE 74
SV DFGA GDG+ YDT AIQSAI++CP G+ PC V FP PG+YLTAT+ LKS V LN+
Sbjct: 33 SVADFGAAGDGLRYDTEAIQSAINSCPEGD-PCHVTFPAPGKYLTATVFLKSGVVLNVES 91
Query: 75 DATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
AT+LGG R+EDYPEES RWYVV+AENATDVGI GGG VDGQA KFVV ++ KNVMVSW
Sbjct: 92 GATILGGTRLEDYPEESWRWYVVVAENATDVGIRGGGAVDGQAAKFVVREDPRKNVMVSW 151
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
N TGAC GDECRPRL+GFL C NV V N+ L +PAYWCLH+VR +N I+D++IYGDFN
Sbjct: 152 NQTGACLGDECRPRLIGFLDCNNVQVSNITLNQPAYWCLHLVRSNNICIQDIAIYGDFNI 211
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSAS 254
PNNDGIDIEDSNNTVITR IDTGDDAICPK+ TGP+YNLT TD WIR+KSSAIKLGSAS
Sbjct: 212 PNNDGIDIEDSNNTVITRCHIDTGDDAICPKSSTGPVYNLTVTDCWIRSKSSAIKLGSAS 271
Query: 255 WFDFKALVFDNITI 268
WFDFK VFDNI I
Sbjct: 272 WFDFKHFVFDNIAI 285
>gi|449501892|ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
sativus]
Length = 463
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 215/281 (76%), Gaps = 14/281 (4%)
Query: 1 VQLLLLLSTTHIHI-------------HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP 47
+QL L H H SV DFGA GDG+HYDT AIQSAI++CP ++
Sbjct: 7 IQLFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPAPSR- 65
Query: 48 CQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGI 107
C V FPPG YLTATI L+S V L+I AT+L G ++EDYP +SSRW+ V+AENA+DVGI
Sbjct: 66 CYVTFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASDVGI 125
Query: 108 TGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
+GGG VDGQ +KFV ++ KNVMVSWN TGAC GDECRP LVGF+G V V NV +
Sbjct: 126 SGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQ 185
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
PA+WCLH+VRC+NT I D+SIYGDF+TPNNDGIDIEDSNNT+ITR +IDTGDDAICPK+
Sbjct: 186 PAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSS 245
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP++NLTAT+ WIRTKSSAIKLGSASWF+F ++FDN+TI
Sbjct: 246 NGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTI 286
>gi|449437609|ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
sativus]
Length = 463
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 215/281 (76%), Gaps = 14/281 (4%)
Query: 1 VQLLLLLSTTHIHI-------------HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP 47
+QL L H H SV DFGA GDG+HYDT AIQSAI++CP ++
Sbjct: 7 IQLFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPAPSR- 65
Query: 48 CQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGI 107
C V FPPG YLTATI L+S V L+I AT+L G ++EDYP +SSRW+ V+AENA+DVGI
Sbjct: 66 CYVTFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASDVGI 125
Query: 108 TGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
+GGG VDGQ +KFV ++ KNVMVSWN TGAC GDECRP LVGF+G V V NV +
Sbjct: 126 SGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQ 185
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
PA+WCLH+VRC+NT I D+SIYGDF+TPNNDGIDIEDSNNT+ITR +IDTGDDAICPK+
Sbjct: 186 PAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSS 245
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP++NLTAT+ WIRTKSSAIKLGSASWF+F ++FDN+TI
Sbjct: 246 NGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTI 286
>gi|242049640|ref|XP_002462564.1| hypothetical protein SORBIDRAFT_02g028280 [Sorghum bicolor]
gi|241925941|gb|EER99085.1| hypothetical protein SORBIDRAFT_02g028280 [Sorghum bicolor]
Length = 462
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/255 (66%), Positives = 200/255 (78%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ SV D+GA GDG HYDTAAIQ+ +DAC + PG+YLTAT+ L+S V L++
Sbjct: 32 VFSVADYGAAGDGSHYDTAAIQATVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVP 91
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
A LLGG R DYP ES RWYVVLAEN T G+TGGG ++GQ FVVT +E+KNVMVS
Sbjct: 92 PGARLLGGTRQADYPPESRRWYVVLAENTTGAGVTGGGEINGQGGAFVVTPSEVKNVMVS 151
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN TG C GDECRPRLVGF+ ++V + ++ L +PAYWCLH+VRCDNT I ++SI+GD N
Sbjct: 152 WNATGDCLGDECRPRLVGFIDSKDVKIHDITLNKPAYWCLHLVRCDNTVIHNVSIFGDLN 211
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSA 253
+PNNDGIDIEDSNNTVIT IDTGDDAICPK+ TGP+YNLTAT+SWIRTKS AIK GSA
Sbjct: 212 SPNNDGIDIEDSNNTVITDCHIDTGDDAICPKSTTGPVYNLTATNSWIRTKSCAIKFGSA 271
Query: 254 SWFDFKALVFDNITI 268
S+FDFK LVFDNITI
Sbjct: 272 SFFDFKRLVFDNITI 286
>gi|326488053|dbj|BAJ89865.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525659|dbj|BAJ88876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/257 (64%), Positives = 199/257 (77%), Gaps = 2/257 (0%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRLKSHVTLN 71
+ SV D+GA GDG YDTAAIQ+A+DAC G +V P PG+YLTAT+ L+S V L
Sbjct: 33 RVFSVADYGAAGDGTRYDTAAIQAAVDACA-GAGGGRVLLPAPGDYLTATVHLRSRVVLE 91
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
+ A LLGG R DYP E RWYVVLAEN T G+TGGG V+GQ FVVT + KNVM
Sbjct: 92 VAPGARLLGGTRQRDYPPERRRWYVVLAENTTGAGVTGGGEVNGQGGAFVVTPSAQKNVM 151
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
VSWN TG C GDECRPRL+GF+ ++V V ++ L +PA WCLH+VRCDN+ IR++SIYGD
Sbjct: 152 VSWNATGDCVGDECRPRLLGFIDSKDVAVHDITLNQPALWCLHLVRCDNSVIRNVSIYGD 211
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLG 251
F+TPNNDGIDIEDSNNTVIT IDTGDDAICPK+ TGP+YNLTAT+ WIRTKS AIK G
Sbjct: 212 FDTPNNDGIDIEDSNNTVITDCHIDTGDDAICPKSSTGPVYNLTATNCWIRTKSCAIKFG 271
Query: 252 SASWFDFKALVFDNITI 268
SAS+F+F+ ++FDNITI
Sbjct: 272 SASFFNFEKMLFDNITI 288
>gi|218202360|gb|EEC84787.1| hypothetical protein OsI_31840 [Oryza sativa Indica Group]
Length = 457
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/255 (65%), Positives = 196/255 (76%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ SV D+GA GDG YDT AIQ+A+DAC + PG+YLTAT+ L+S V L++
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
A LLGG R DYP ES RWYVVLAEN T G+TGGG ++GQ FVVT N KN+MVS
Sbjct: 86 PGARLLGGTRQADYPPESRRWYVVLAENTTGAGVTGGGEINGQGGAFVVTPNPQKNIMVS 145
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN TG C GDECRPRLVGF+ ++V + ++ L +PAYWCLHIVRCDNT I ++SIYGDF+
Sbjct: 146 WNATGDCEGDECRPRLVGFIDSKDVTIHDITLNQPAYWCLHIVRCDNTMIHNVSIYGDFD 205
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSA 253
TPNNDGIDIEDSNNT IT IDTGDDAICPK+ TGP+YNLTAT+ WIRTKS AIK GSA
Sbjct: 206 TPNNDGIDIEDSNNTAITHCHIDTGDDAICPKSTTGPVYNLTATNCWIRTKSCAIKFGSA 265
Query: 254 SWFDFKALVFDNITI 268
S+FDFK LVFDNITI
Sbjct: 266 SFFDFKKLVFDNITI 280
>gi|357154118|ref|XP_003576676.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 461
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/261 (62%), Positives = 201/261 (77%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSH 67
S + SV+D+GA GDG YDTAAIQ+A++AC + PG+YLTAT+ L+S
Sbjct: 25 SAASPRVFSVVDYGAAGDGARYDTAAIQAAVNACAAAGGGRVLLPAPGDYLTATVHLRSG 84
Query: 68 VTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
V L++ A LLGG R DYP ES RWYVVLAEN T G+ GGG ++GQ FVVT ++
Sbjct: 85 VVLDVPPGARLLGGTRQGDYPPESRRWYVVLAENTTGAGVAGGGEINGQGGAFVVTPSDQ 144
Query: 128 KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMS 187
KN+MVSWN TG C GDECRPRLVGF+ ++V + ++ L +PAYWCLH+VRCDN+ IR++S
Sbjct: 145 KNIMVSWNTTGDCEGDECRPRLVGFIDSKDVRIHDITLNQPAYWCLHLVRCDNSVIRNVS 204
Query: 188 IYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSA 247
IYGDF+TPNNDGIDIEDSNNTVIT IDTGDDAICPK+ TGP+YNLTAT+ WIRTKS A
Sbjct: 205 IYGDFDTPNNDGIDIEDSNNTVITDCHIDTGDDAICPKSSTGPVYNLTATNCWIRTKSCA 264
Query: 248 IKLGSASWFDFKALVFDNITI 268
IK GSAS+F+F+ L+FDNITI
Sbjct: 265 IKFGSASFFNFERLLFDNITI 285
>gi|168034210|ref|XP_001769606.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679148|gb|EDQ65599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 183/252 (72%), Gaps = 1/252 (0%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V FGA G+G YDT IQS ID C V PPG YLT TI L+S++TL + E A
Sbjct: 1 VTRFGATGNGRVYDTIPIQSCIDHCAEQGGGV-VHIPPGTYLTGTIHLRSNITLWVEEGA 59
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
T++G R ED+ ES+RWY +LAE A +V +TGGG+V GQ + FVV E KN+MVSWN
Sbjct: 60 TIMGSTRQEDFAPESARWYTILAEGADNVELTGGGIVTGQGLNFVVEFKEEKNIMVSWNV 119
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
TG C GDECRPRLVGF+ C+NV++WNVRL+EPAYWCLH+V D I ++SI+GDFN+PN
Sbjct: 120 TGDCLGDECRPRLVGFINCKNVHIWNVRLQEPAYWCLHLVNSDTISIHNVSIHGDFNSPN 179
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSASWF 256
DGIDIE SNNT+IT IDTGDDAICPKT GPL NLT T SWIRTKS A+KLGS +
Sbjct: 180 TDGIDIESSNNTLITHCHIDTGDDAICPKTADGPLCNLTVTHSWIRTKSCAVKLGSRTNH 239
Query: 257 DFKALVFDNITI 268
D + L F+++ I
Sbjct: 240 DLRNLHFEHLVI 251
>gi|226530110|ref|NP_001148969.1| polygalacturonase precursor [Zea mays]
gi|195623694|gb|ACG33677.1| polygalacturonase [Zea mays]
gi|414886016|tpg|DAA62030.1| TPA: polygalacturonase [Zea mays]
Length = 457
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 169/260 (65%), Positives = 197/260 (75%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T I SV D+GA GDG YDTAAIQ+A+DAC + PG YLTAT++L+S V
Sbjct: 22 TRSSRIFSVADYGAAGDGFRYDTAAIQAAVDACAAAGGGRVLLPAPGNYLTATVQLRSRV 81
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
L + A LLGG R DYP ES RWYVVLAEN T GITGGG ++GQ FVV +E+K
Sbjct: 82 VLEVPPGARLLGGTRQADYPPESRRWYVVLAENTTGAGITGGGEINGQGGAFVVRPSEVK 141
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
NVMVSWN TG C GDECRPRLVGF+ ++V + ++ L +PAYWCLH+VRCDNT I ++SI
Sbjct: 142 NVMVSWNATGDCLGDECRPRLVGFIDSKDVRIHDITLNQPAYWCLHLVRCDNTVIHNVSI 201
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAI 248
+GDF TPNNDGIDIEDSNNTVIT IDTGDDAI PK+ TGP+YNLTAT+ W+RTKS AI
Sbjct: 202 FGDFKTPNNDGIDIEDSNNTVITDCHIDTGDDAISPKSTTGPVYNLTATNCWMRTKSCAI 261
Query: 249 KLGSASWFDFKALVFDNITI 268
K GSAS+FDFK LVFDNITI
Sbjct: 262 KFGSASFFDFKRLVFDNITI 281
>gi|222641814|gb|EEE69946.1| hypothetical protein OsJ_29824 [Oryza sativa Japonica Group]
Length = 456
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/255 (65%), Positives = 195/255 (76%), Gaps = 1/255 (0%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ SV D+GA GDG YDT AIQ+A+DAC + PG+YLTAT+ L+S V L++
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
A LLGG R DYP ES RWYVVLAEN T G+TGGG ++GQ FVVT N KN+MVS
Sbjct: 86 PGARLLGGTRQADYPPESRRWYVVLAENTTGAGVTGGGEINGQGGAFVVTPNPQKNIMVS 145
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN TG C GDECRPRLVGF+ ++V + ++ L +PAY CLHIVRCDNT I ++SIYGDF+
Sbjct: 146 WNATGDCEGDECRPRLVGFIDSKDVTIHDITLNQPAY-CLHIVRCDNTMIHNVSIYGDFD 204
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSA 253
TPNNDGIDIEDSNNT IT IDTGDDAICPK+ TGP+YNLTAT+ WIRTKS AIK GSA
Sbjct: 205 TPNNDGIDIEDSNNTAITHCHIDTGDDAICPKSTTGPVYNLTATNCWIRTKSCAIKFGSA 264
Query: 254 SWFDFKALVFDNITI 268
S+FDFK LVFDNITI
Sbjct: 265 SFFDFKKLVFDNITI 279
>gi|302789251|ref|XP_002976394.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
gi|300156024|gb|EFJ22654.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
Length = 469
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/264 (54%), Positives = 186/264 (70%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
LLL H + +V+DFGA DG DT+AIQSAID C + + FPPG+YLT + L
Sbjct: 33 LLLDHGHRWVCNVLDFGAVADGKTIDTSAIQSAIDYCAWKARASSLHFPPGKYLTGAVFL 92
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
S++ + I A +LG R EDYP E SRWYV+ AENA +V +TGGG++DG+ ++FV
Sbjct: 93 ASNMAVVIDPGAIILGSSRQEDYPRERSRWYVLAAENAVNVSVTGGGIIDGRGLEFVSRF 152
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
KNVMVSWN TGAC GDECRPRL+GF+ C NV VWN+ LR+PAYW LH+ +I
Sbjct: 153 WSRKNVMVSWNTTGACIGDECRPRLLGFVNCENVRVWNIHLRQPAYWSLHVANSSGIYIH 212
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTK 244
D+++YGDFNTPNNDGIDI+ SNNT IT ++DT DD I K+ GP+ N++ T+SWIR+K
Sbjct: 213 DITLYGDFNTPNNDGIDIDGSNNTYITNCRLDTADDGIVVKSIAGPVSNVSVTNSWIRSK 272
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
S A+K+GS ++ D L FD+ITI
Sbjct: 273 SCAVKIGSETYHDLDGLYFDSITI 296
>gi|302803023|ref|XP_002983265.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
gi|300148950|gb|EFJ15607.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
Length = 472
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 186/258 (72%), Gaps = 6/258 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP-----GNKPCQVRFPPGEYLTATIRLKSHVTL 70
+V D+GA G+G +T++IQSAI+AC G+K V PPG YLT T+ L+S++TL
Sbjct: 35 NVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSV-VWVPPGSYLTGTLFLRSNMTL 93
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
+I A +LG R DYP E RWYV+LAE +VGITGGG V+GQ+ KFVV + KN+
Sbjct: 94 HIDHGAKILGSSRQMDYPPEKDRWYVILAEGVENVGITGGGEVNGQSSKFVVRYDPKKNI 153
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
M SWN TG C GDECRPRLVGFL + VWN+ LR+PAYWCLH+V + I D+SI G
Sbjct: 154 MTSWNVTGNCLGDECRPRLVGFLRSTKIRVWNIDLRQPAYWCLHLVNSNFIHIHDISILG 213
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKL 250
DF+TPNNDGID++ SNNTVI R +IDTGDDAICPKT GPL NLT D W+RTKS +KL
Sbjct: 214 DFDTPNNDGIDVDGSNNTVIERCRIDTGDDAICPKTTYGPLVNLTVRDCWVRTKSCGVKL 273
Query: 251 GSASWFDFKALVFDNITI 268
GSA++FDF+ L F N+ I
Sbjct: 274 GSATFFDFRHLRFSNLII 291
>gi|302755730|ref|XP_002961289.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
gi|300172228|gb|EFJ38828.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
Length = 474
Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/258 (58%), Positives = 185/258 (71%), Gaps = 6/258 (2%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP-----GNKPCQVRFPPGEYLTATIRLKSHVTL 70
+V D+GA G+G +T++IQSAI+AC G+K V PPG YLT T+ L+S++TL
Sbjct: 37 NVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSV-VWVPPGSYLTGTLFLRSNMTL 95
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
+I A +LG R DYP E RWYV+LAE +VGITGGG V+GQ+ KFVV + KN+
Sbjct: 96 HIDRGAKILGSSRQMDYPPEKDRWYVILAEGVENVGITGGGEVNGQSSKFVVRYDPKKNI 155
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
M SWN TG C GDECRPRLVGFL + VWN+ LR+PAYWCLH+V + I D+SI G
Sbjct: 156 MTSWNVTGNCLGDECRPRLVGFLRSTKIRVWNIDLRQPAYWCLHLVNSNFIHIHDISILG 215
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKL 250
DF+TPNNDGIDI+ SNNTVI R +IDTGDDAICPKT GPL NLT D W+RTKS +KL
Sbjct: 216 DFDTPNNDGIDIDGSNNTVIERCRIDTGDDAICPKTTYGPLVNLTVRDCWVRTKSCGVKL 275
Query: 251 GSASWFDFKALVFDNITI 268
GSA++FDF L F N+ I
Sbjct: 276 GSATFFDFHHLRFSNLII 293
>gi|168063573|ref|XP_001783745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664751|gb|EDQ51459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/252 (58%), Positives = 184/252 (73%), Gaps = 1/252 (0%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGA G+G YDT+AIQS+ID C V PGE LT T+ LKS++TL + + A
Sbjct: 35 VSDFGATGNGEVYDTSAIQSSIDYCANQGGGV-VYVSPGENLTGTLYLKSNITLWVDKGA 93
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
T++G R ED+ +RWY +LAE+A +V +TGGG+V GQ +KFVV E KN+MVSWN
Sbjct: 94 TIVGSARQEDFLAHWTRWYTILAEDAENVELTGGGIVTGQGLKFVVEFKEEKNIMVSWNV 153
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
TG C GDECRPRLVGF+ C+NV++WNV LREPAYWCLHIV+ + I D+S++GDFN+PN
Sbjct: 154 TGDCVGDECRPRLVGFINCKNVHIWNVFLREPAYWCLHIVKSNIISIHDVSMHGDFNSPN 213
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSASWF 256
DGIDI+ SNNTVI IDTGDDAIC K+ GPLYNLT T+ WIRTKS A+KLGS + F
Sbjct: 214 TDGIDIDSSNNTVIKDCHIDTGDDAICSKSELGPLYNLTVTNCWIRTKSCAVKLGSMTNF 273
Query: 257 DFKALVFDNITI 268
+ L F+ + I
Sbjct: 274 NLGNLHFEQLVI 285
>gi|302811076|ref|XP_002987228.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
gi|300145125|gb|EFJ11804.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
Length = 469
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/264 (53%), Positives = 184/264 (69%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
LL H + +V+DFGA DG DT+AIQSAID C + + FPPG+YLT + L
Sbjct: 33 LLFDHRHRWVCNVLDFGAVADGKTIDTSAIQSAIDYCAWKARASSLHFPPGKYLTGALFL 92
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
S++ + I A +LG R EDYP E SRWYV+ AENA +V +TGGG++DG+ ++FV
Sbjct: 93 ASNMAVVIDPGAIILGSSRQEDYPRERSRWYVLAAENAVNVSVTGGGIIDGRGLEFVSRF 152
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
KNVMVSWN TGAC GDECRPRL+GF+ C NV VWN+ LR+PAYW LH+ +I
Sbjct: 153 WSRKNVMVSWNTTGACIGDECRPRLLGFVNCENVRVWNIHLRQPAYWSLHVANSSGIYIH 212
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTK 244
++++YGDFNTPNNDGIDI+ SNNT IT ++DT DD I K+ GP+ N++ T+SWIR+K
Sbjct: 213 NITMYGDFNTPNNDGIDIDGSNNTYITNCRLDTADDGIVVKSIAGPVSNVSVTNSWIRSK 272
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
S A+K+GS + D L FD+ITI
Sbjct: 273 SCAVKIGSETDHDLDGLYFDSITI 296
>gi|115479865|ref|NP_001063526.1| Os09g0487600 [Oryza sativa Japonica Group]
gi|113631759|dbj|BAF25440.1| Os09g0487600 [Oryza sativa Japonica Group]
Length = 452
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/255 (63%), Positives = 190/255 (74%), Gaps = 5/255 (1%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ SV D+GA GDG YDT AIQ+A+DAC + PG+YLTAT+ L+S V L++
Sbjct: 26 VFSVADYGAAGDGARYDTGAIQAAVDACAAAGGGRVLLPAPGDYLTATVHLRSRVVLDVA 85
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
A LLGG R DYP ES RWYVVLAEN T G+TGGG ++GQ FVVT N KN+MVS
Sbjct: 86 PGARLLGGTRQADYPPESRRWYVVLAENTTGAGVTGGGEINGQGGAFVVTPNPQKNIMVS 145
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
WN TG C GDECRPRLVGF+ ++V + ++ L +PAYW CDNT I ++SIYGDF+
Sbjct: 146 WNATGDCEGDECRPRLVGFIDSKDVTIHDITLNQPAYWW-----CDNTMIHNVSIYGDFD 200
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSA 253
TPNNDGIDIEDSNNT IT IDTGDDAICPK+ TGP+YNLTAT+ WIRTKS AIK GSA
Sbjct: 201 TPNNDGIDIEDSNNTAITHCHIDTGDDAICPKSTTGPVYNLTATNCWIRTKSCAIKFGSA 260
Query: 254 SWFDFKALVFDNITI 268
S+FDFK LVFDNITI
Sbjct: 261 SFFDFKKLVFDNITI 275
>gi|297739712|emb|CBI29894.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/151 (78%), Positives = 130/151 (86%)
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
MKFV E KNVMVSWN TGAC GDECRPRLVGFLGCRNV VWN+RL EPAYWCLH+V
Sbjct: 1 MKFVKRFEEAKNVMVSWNETGACLGDECRPRLVGFLGCRNVRVWNIRLNEPAYWCLHLVG 60
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTAT 237
C+NT I D+SIYGDFNTPNNDGIDIEDSNNTVITR I TGDD+ICPKT GPLYNLT T
Sbjct: 61 CNNTSIHDVSIYGDFNTPNNDGIDIEDSNNTVITRCSISTGDDSICPKTSNGPLYNLTVT 120
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ W+R++SSAIKLGS S++DFK LVFDNITI
Sbjct: 121 NCWLRSRSSAIKLGSGSFYDFKGLVFDNITI 151
>gi|124360130|gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago truncatula]
Length = 205
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/157 (71%), Positives = 130/157 (82%), Gaps = 2/157 (1%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRLKSHVTLNIHE 74
SV ++GA GDGIHYDT +IQ+AID+CP + PC++ FP PG YLTATI L+S V LN+
Sbjct: 49 SVTEYGAIGDGIHYDTVSIQTAIDSCP-YSIPCRITFPSPGNYLTATIFLRSGVVLNVEP 107
Query: 75 DATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
AT+LGGPR +DYP+ESSRWYVVLAENATDVGI GGGVVDGQA KFVV NE KNVMVSW
Sbjct: 108 GATILGGPRQKDYPKESSRWYVVLAENATDVGIAGGGVVDGQAEKFVVRYNERKNVMVSW 167
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
N TG C GDECRPRL+GFLGC+NV V+NV L +PAYW
Sbjct: 168 NQTGDCLGDECRPRLIGFLGCKNVKVFNVTLNQPAYW 204
>gi|194697548|gb|ACF82858.1| unknown [Zea mays]
Length = 314
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 117/138 (84%)
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
MVSWN TG C GDECRPRLVGF+ ++V + ++ L +PAYWCLH+VRCDNT I ++SI+G
Sbjct: 1 MVSWNATGDCLGDECRPRLVGFIDSKDVRIHDITLNQPAYWCLHLVRCDNTVIHNVSIFG 60
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKL 250
DF TPNNDGIDIEDSNNTVIT IDTGDDAI PK+ TGP+YNLTAT+ W+RTKS AIK
Sbjct: 61 DFKTPNNDGIDIEDSNNTVITDCHIDTGDDAISPKSTTGPVYNLTATNCWMRTKSCAIKF 120
Query: 251 GSASWFDFKALVFDNITI 268
GSAS+FDFK LVFDNITI
Sbjct: 121 GSASFFDFKRLVFDNITI 138
>gi|24417492|gb|AAN60356.1| unknown [Arabidopsis thaliana]
Length = 192
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 118/158 (74%), Gaps = 6/158 (3%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC----PPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
SV DFGA GDGI+YDT+AIQS IDAC + C+V FP G YLTA + L+S V L+
Sbjct: 35 SVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSICRVVFPSGNYLTAKLHLRSGVILD 94
Query: 72 IHEDATLLGGPRIEDY--PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ E+A LLGGPRIEDY E SS WYVV+A NATDVGITGGG +DGQ KFVV +E KN
Sbjct: 95 VTENAVLLGGPRIEDYYPAETSSDWYVVVANNATDVGITGGGAIDGQGSKFVVRFDEKKN 154
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
VMVSWN TGAC GDECRPRLVGF+ NV +WN+ LRE
Sbjct: 155 VMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLRE 192
>gi|307111324|gb|EFN59558.1| hypothetical protein CHLNCDRAFT_8203, partial [Chlorella
variabilis]
Length = 370
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 135/252 (53%), Gaps = 5/252 (1%)
Query: 21 GAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG 80
GA Y TAA+Q+AIDAC V P G YLTA++ L V L++ TLL
Sbjct: 8 GAHPSASRYSTAALQAAIDACSASCGTVVVDVP-GAYLTASLLLSGCVHLHLPAGVTLLA 66
Query: 81 GPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV--MVSWNHTG 138
G R DY WY++ N T ++GGG VDG+A +V ++
Sbjct: 67 GTRRRDYGPTQPDWYLLRFANCTGCRLSGGGTVDGRARLWVEPAGGERHPRHEEEQQQQQ 126
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
C CRPRLVG + +V++ V L +P YWCLH++R I + I GD++ PNND
Sbjct: 127 RCLPAWCRPRLVGVVDSADVSITGVTLTDPVYWCLHVLRSGGVRISGVRIRGDWDIPNND 186
Query: 199 GIDIEDSNNTVITRVQIDTGDDAICPKTYTG--PLYNLTATDSWIRTKSSAIKLGSASWF 256
GID++ S + I+ +DT DD +C KT PL +++ TD +R++SSAIKLGS S
Sbjct: 187 GIDVDGSRHVSISHADVDTADDTVCLKTTAAGFPLEHVSVTDCRLRSRSSAIKLGSESRA 246
Query: 257 DFKALVFDNITI 268
D + L F + I
Sbjct: 247 DMRHLRFARLAI 258
>gi|124360129|gb|ABN08145.1| Virulence factor, pectin lyase fold [Medicago truncatula]
Length = 173
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/102 (73%), Positives = 87/102 (85%), Gaps = 1/102 (0%)
Query: 168 PAYWC-LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
P +C LH+VR +N I+D++IYGD N PNNDGIDIEDSNNTVITR IDTGDDAICPK+
Sbjct: 15 PESFCFLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKS 74
Query: 227 YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGP++NLT T+SWIR+KSSAIK GSASWF+FK VFDNITI
Sbjct: 75 STGPVHNLTVTNSWIRSKSSAIKFGSASWFEFKHFVFDNITI 116
>gi|393789553|ref|ZP_10377674.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
gi|392651001|gb|EIY44667.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 22/259 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ GAKGDG +TA IQ AID C N V PPG++LT T+ +KS+V L++ A
Sbjct: 24 ITTLGAKGDGTTNNTALIQKAIDDCSAHNGG-TVNVPPGQFLTGTLFIKSNVNLHLDFGA 82
Query: 77 TLLGGPRIEDYPEE------SSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
LLG ++ Y + ++ A A+++ ITG G ++GQ
Sbjct: 83 ELLGSTDLDSYHKAFPGLKGKETPAIIFAREASNIAITGFGTINGQGAH----------- 131
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
++ H G RP+++ F+GC+NV V +V LR AYW +CD IR + +Y
Sbjct: 132 -PNFQHGNDSKGGPKRPKIIYFIGCKNVRVQDVTLRNSAYWTQDYEKCDGVVIRGVKVYS 190
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTATDSWIRTKSSAIK 249
N NNDG+DI DS N VI+ ID DDA+C K+ T P N+T T+ +++ +AIK
Sbjct: 191 HVNW-NNDGLDI-DSRNVVISDCYIDCDDDALCLKSDTDTPCENVTVTNCVLKSNCNAIK 248
Query: 250 LGSASWFDFKALVFDNITI 268
G++S+ FK + N TI
Sbjct: 249 FGTSSYSGFKNITILNCTI 267
>gi|393785428|ref|ZP_10373579.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
gi|392662401|gb|EIY55961.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 136/256 (53%), Gaps = 22/256 (8%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
GAKGDGI +TA IQ AID C K V P G +LT T+ LKS+V L++H A LL
Sbjct: 28 LGAKGDGITDNTAFIQKAIDDCS-ARKGGTVEIPSGHFLTRTLFLKSNVNLHLHFGAELL 86
Query: 80 GGPRIEDY----PEESSRWY--VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
G ++ Y PE + ++ A ++ ITG G ++GQ +
Sbjct: 87 GSTDLDSYHKVFPELKGKESPALIFARGVANIAITGSGTINGQGAH------------QN 134
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
+ H G RP+++ F+GC NV V +V LR AYW +C+ +R + +Y N
Sbjct: 135 FQHGNDSKGGPRRPKIIYFIGCNNVRVQDVTLRNSAYWTQDYEKCNGVIVRGVKVYSHAN 194
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTATDSWIRTKSSAIKLGS 252
NNDG+DI DS N V++ ID DDA+C K+ T P N+T T+ +++ +AIK G+
Sbjct: 195 W-NNDGLDI-DSRNVVVSDCYIDCDDDALCLKSDTDTPCENVTVTNCVLKSNCNAIKFGT 252
Query: 253 ASWFDFKALVFDNITI 268
+S+ FK + N TI
Sbjct: 253 SSYSGFKNVTISNCTI 268
>gi|300770109|ref|ZP_07079988.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762585|gb|EFK59402.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 649
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 139/259 (53%), Gaps = 24/259 (9%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +FGA GD + +TAAIQ AID+C V P G++L+ T+ LK+ VTL++
Sbjct: 57 ITNFGAVGDKVTLNTAAIQRAIDSCAASGGGL-VVVPAGDFLSGTVHLKTGVTLHVQSGG 115
Query: 77 TLLGGPRIEDYPEESSRWY------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
TL G PR+ DYP +S ++ +V A++A ++GI+G G +DGQ +E +N
Sbjct: 116 TLWGSPRVSDYPLNTSPYHYLNNRALVYAKDANNIGISGTGTIDGQG-----GSSEFQN- 169
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
D RP+++ F C N+ V ++ LR AYW + + C N I ++++
Sbjct: 170 --------GGKEDGMRPKIIEFANCDNIIVKDINLRNAAYWTQYYIYCRNVLIDHINVF- 220
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTATDSWIRTKSSAIK 249
F NNDGIDI D+ N I I++ DDAIC K+ + N+T + I T + IK
Sbjct: 221 SFANFNNDGIDI-DAENVTIRNCTINSQDDAICLKSGSRVACRNVTVENCNITTNCNGIK 279
Query: 250 LGSASWFDFKALVFDNITI 268
G+AS+ FK + N +
Sbjct: 280 FGAASYTGFKNIQVRNCKV 298
>gi|372221475|ref|ZP_09499896.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 507
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 12/274 (4%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
+L+ + + ++V+DFGA G+ T AIQ+AID V P G +L+ +I
Sbjct: 18 MLVTAQKNRKTYNVLDFGADSSGVALSTQAIQNAIDKATKSKDGATVLLPKGTFLSGSIE 77
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPE-ESSRWYVVLAENATDVGITGGGVVDGQAMKFVV 122
LK++V L + E TLLG I Y + + ++LA+ AT+ I+G G +DGQ +
Sbjct: 78 LKNNVELYLEEGTTLLGSTDIYQYRKIDEGNLALLLAKGATNFAISGSGTIDGQGRPLAL 137
Query: 123 TKNEI----KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + K + +N + RP L+ F C+ V + L+ A W I +C
Sbjct: 138 AVDSLHHIGKRIDPKYNTRRMRPNELARPELINFFQCKGYTVSGITLKNSASWLQTIDQC 197
Query: 179 DNTFIRDMSIYGDFNTP--NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYN--L 234
++ ++I FN NNDG DI DS N + ++T DD IC K+++ +N +
Sbjct: 198 EDVLYDGVTI---FNRAYWNNDGFDIVDSKNVTVQNCNLNTADDGICLKSHSAKHFNDSI 254
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T + IR+ +SAIK G+AS FK + D+I +
Sbjct: 255 TIKNCTIRSSASAIKFGTASLGGFKNVTIDSIQV 288
>gi|340619595|ref|YP_004738048.1| polygalacturonase [Zobellia galactanivorans]
gi|339734392|emb|CAZ97769.1| Polygalacturonase, family GH28 [Zobellia galactanivorans]
Length = 462
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 14/265 (5%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGA +G +T AIQ AIDAC G V G+Y++ T+ LK VTL+I
Sbjct: 26 VYKATDFGAIANGKTVNTEAIQRAIDACNEGGGGT-VILDKGDYVSGTLLLKDKVTLHIA 84
Query: 74 EDATLLGGPRIEDYPE---------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
EDA L+G DY + ++ A+NAT++ +TG G +DG F+ K
Sbjct: 85 EDAQLIGSSNPLDYQSIDTFTDATGQKRGNCLIGAKNATNIAVTGKGTIDGNGEAFLA-K 143
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
N IK + N RP L+ F+ + V +V LR+PA W H + ++ +
Sbjct: 144 N-IKAKIKELNLAQTEGFGSNRPFLLRFVNSSQIKVQDVHLRQPAAWTCHFYQSNDILVE 202
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-GPLYNLTATDSWIRT 243
++SIY + NNDGID++ S + +I I+TGDDAIC KT + P YN+ +D +R+
Sbjct: 203 NVSIYSHAH-KNNDGIDLDSSYDAIIKNCDINTGDDAICIKTTSPKPTYNVQVSDCKLRS 261
Query: 244 KSSAIKLGSASWFDFKALVFDNITI 268
+IK G+ S D + N I
Sbjct: 262 DWGSIKFGTESMGDMYNIDITNCQI 286
>gi|384251035|gb|EIE24513.1| pectin lyase-like protein [Coccomyxa subellipsoidea C-169]
Length = 944
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 131/255 (51%), Gaps = 4/255 (1%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPP-GEYLTATIRLKSHVTLNIHED 75
V D GA GDG YDTAAIQ+AIDAC V F +YL+ +R+K V L + +
Sbjct: 50 VKDHGAIGDGTTYDTAAIQAAIDACAKNKDGGIVTFDEDKQYLSGHVRVKDGVRLRLPKS 109
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
AT+L G + E YP+ + WY++L E + G+ G G +D Q + N + + +W+
Sbjct: 110 ATILAGSKREIYPKSYADWYLILFE-CQNCGVEGEGRIDAQGTLWTYGGNLEQKQVTNWD 168
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
+ CRP LVG V + V+L + +W +HI+R + + +SI+GD P
Sbjct: 169 DSSCPKQGVCRPHLVGVRDSFQVTIQGVQLYDSVHWAVHILRSEAVAVMGVSIWGDPLVP 228
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--PLYNLTATDSWIRTKSSAIKLGSA 253
+ GI I+ S + I T DDA+ KT P+ + I++KS AI++G
Sbjct: 229 LSRGIVIDGSRRVYLGGNVISTADDAVSLKTTAADKPVEFVLVDGGLIQSKSVAIQIGDE 288
Query: 254 SWFDFKALVFDNITI 268
+ LVF NITI
Sbjct: 289 TRASMSTLVFQNITI 303
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 26/260 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +FGA GD + +T AIQ AID+C V P G +L+ TI LK+ VTL++
Sbjct: 56 ITNFGAVGDKVTLNTKAIQRAIDSCATSGGGL-VVVPAGNFLSGTIHLKTGVTLHVQSGG 114
Query: 77 TLLGGPRIEDYPEESSRWY------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
TL G PR DYP +S ++ ++ A++A +GI+G G +DGQ N +
Sbjct: 115 TLFGSPRASDYPLNTSVYHSTNNRALIYAKDANHIGISGTGTIDGQGKSSEFQNNGKE-- 172
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
D RP+++ F C ++ V ++ L AYW + V C N I +++Y
Sbjct: 173 ------------DGTRPKIIEFANCDDITVKDINLTNAAYWTQYYVYCRNVVIDHINVY- 219
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAI 248
F NNDGID+ DS N I I++ DD IC K+ + P+ N+T + I T + I
Sbjct: 220 SFANFNNDGIDV-DSQNVTIRNCTINSQDDGICLKSES-PVACRNVTVDNCTITTNCNGI 277
Query: 249 KLGSASWFDFKALVFDNITI 268
K G+AS FK + N +
Sbjct: 278 KFGTASSAGFKNIKVQNCKV 297
>gi|319953995|ref|YP_004165262.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422655|gb|ADV49764.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 459
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 18/272 (6%)
Query: 1 VQLLLLLSTTHI----HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE 56
+ LLLL + I+ + +FGAKGD I +T AIQ AID C N V G
Sbjct: 14 IALLLLGAMVSFSLKPKIYDIKNFGAKGDSITINTKAIQKAIDKCSK-NGGGIVVIKEGV 72
Query: 57 YLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE---------ESSRWYVVLAENATDVGI 107
Y + TI LK +VTL I + A LLG +DY + ++ A A ++GI
Sbjct: 73 YSSGTILLKDNVTLQIDKSAKLLGSANPQDYQSIDTFVDATGQKRGTCLIGAMGAKNIGI 132
Query: 108 TGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
+G G +DG F+ IK + + G+ RP L+ F+ + + N+ LRE
Sbjct: 133 SGSGSIDGNGTAFLPENLFIKKKALGISGEDRFGGN--RPFLLRFVKSTQITLKNIHLRE 190
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
A W H + N + ++SIY N NNDGID++ S++ +I I++GDDAIC K+
Sbjct: 191 AAAWACHFFQSSNILVDNVSIYNHANQ-NNDGIDLDSSHDIIIKNCNINSGDDAICIKST 249
Query: 228 TG-PLYNLTATDSWIRTKSSAIKLGSASWFDF 258
+ P YN+ ++ +++ AIK G+ S DF
Sbjct: 250 SPLPTYNVKVSNCTLKSDWGAIKFGTESMGDF 281
>gi|256848396|ref|ZP_05553838.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
gi|256714663|gb|EEU29642.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
Length = 409
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 24/253 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE- 89
T A+QSAID C + QV P G Y+ ++ LKS+V L++ A L+G E Y
Sbjct: 23 TVALQSAIDRCNQ-HGGGQVIIPEGRYIIDSLILKSNVDLHLESGAELIGSGDEERYQHR 81
Query: 90 ---------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGAC 140
E+ ++ A+ ++ ITG G +DG KF++ + + + + +
Sbjct: 82 PGPFELIKNETPISGLIYADGQENIAITGSGTIDGNYEKFILPNQQDEVHLKFYKYP--- 138
Query: 141 SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
RP +V F CRNV + V L+ +W +H+V NT I ++I + PN DGI
Sbjct: 139 -----RPMMVYFENCRNVLIQGVTLQNSPFWTVHLVGDLNTEISHLTINNEVRMPNTDGI 193
Query: 201 DIEDSNNTVITRVQIDTGDDAICPK-----TYTGPLYNLTATDSWIRTKSSAIKLGSASW 255
D++ S NT I QI TGDDAICPK + G NLT T+ I T+SSA+K GS+S+
Sbjct: 194 DVDRSKNTYIHDCQIHTGDDAICPKCTEETSEYGDCENLTVTNCHIVTQSSAVKFGSSSF 253
Query: 256 FDFKALVFDNITI 268
+F +F ++T+
Sbjct: 254 GNFNNCIFRHLTV 266
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 127/252 (50%), Gaps = 19/252 (7%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+++V +GA GDG DT A+Q IDAC VR P G++ TI LKS+VTL++
Sbjct: 50 VYNVKRYGAIGDGKAMDTKAVQETIDACHEAGGGV-VRVPAGDFQIGTIVLKSNVTLSLD 108
Query: 74 EDATLLGGPRIEDYPEESSRW-------YVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A+LLG + DYP E+ R ++ AE+A ++ I G GV+DG+ +
Sbjct: 109 HGASLLGSTNVADYPIENLRRPREGAAHCLIYAEDAKNITIEGLGVIDGRGTHEFFPRKR 168
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
G SG RPRL+ C ++ V + PA+W LH++ C N +
Sbjct: 169 ---------RGGKNSG--IRPRLMRMESCEDLTFSGVTYKRPAFWGLHLIDCKNIHFSAV 217
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSS 246
++ N NNDG+D++ N +I + TGDDAIC K+ P N+ + ++
Sbjct: 218 TLRFRNNNYNNDGLDLDGCENVLIENCDLSTGDDAICLKSSMNPCRNIVVRGCRADSNTA 277
Query: 247 AIKLGSASWFDF 258
A+K GS+S F
Sbjct: 278 AVKFGSSSRGGF 289
>gi|395804711|ref|ZP_10483946.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433099|gb|EJF99057.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 479
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 140/280 (50%), Gaps = 24/280 (8%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTAT 61
L L+ + I+ V +GAKGDG D AAIQ AIDAC +V P P +L
Sbjct: 12 FCLSLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDACSKTGG--RVLIPAPFTFLAGP 69
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDY--------PEESSRWYVVLAENATDVGITGGGVV 113
I +KS V L+I A LL P + Y P E + W + EN D I+G G +
Sbjct: 70 IDVKSKVDLHIEAGAKLLASPDEKLYTKSAFRTNPGEGTIW--IGGENVEDFTISGSGKI 127
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + F+ + + V+ +N + RP ++ +G +N+ + +V + AYW +
Sbjct: 128 DGNGVSFMGAEEDDAYVLKPFNVL------DPRPHVLTIIGGKNIRIKDVHIGNSAYWTV 181
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT----- 228
H+V C++ I +++ N+DGID++ S N I+ I++GDD IC K
Sbjct: 182 HLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEEF 241
Query: 229 GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
G N+T T+ + + S AIK+GS + + +VF+N I
Sbjct: 242 GACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCII 281
>gi|325300385|ref|YP_004260302.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319938|gb|ADY37829.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 133/267 (49%), Gaps = 17/267 (6%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V GA GDG +T ++Q AID +RFP G YLT ++RLKS VTL++ E A
Sbjct: 27 VTRHGAVGDGKTLNTGSLQGAIDGLHARGGGV-LRFPAGRYLTGSLRLKSGVTLHLEEGA 85
Query: 77 TLLGGPRIEDYPEESSR-----------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
LLG DYP+ S+ ++ A+ A ++GITGGG VDGQ + +T +
Sbjct: 86 VLLGSTSPYDYPKFSTEKKLKVNNDHFDQALIYADGAENIGITGGGCVDGQGRELALTID 145
Query: 126 EIKNV--MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+ + +V ++ RP+L+ GCRNV + V R A W L C + +
Sbjct: 146 SLHHTGELVDPHYNTYRKRPNTRPKLLFVRGCRNVRIHRVSFRSSAAWGLSFSLCTDVTL 205
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYN--LTATDSWI 241
+ I + NNDGIDI D + I +++ DD IC K++ N ++ I
Sbjct: 206 DSLHIE-NRAYWNNDGIDISDCKDVRIAHCDVNSADDGICLKSHNRDACNDRVSIAHCRI 264
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
+ +SAIK G+ S FK + D+I +
Sbjct: 265 ISSASAIKFGTESGGGFKNVTIDDIRV 291
>gi|218259507|ref|ZP_03475220.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
gi|218225038|gb|EEC97688.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
Length = 489
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 18/258 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ AID N ++ F G YLT +I LKS+VT+++ E A L+
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFISE-NGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAVLV 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G DY E WY ++LA ++GITG GV+DG+ E+ N ++ ++G
Sbjct: 89 GSTNPYDYDMELKAWYGLILANKQDNIGITGKGVIDGRG-------RELANNFINQVYSG 141
Query: 139 ACSGD------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP+LV F C+NV + V + PA+W +C+N I ++++
Sbjct: 142 VIRDKLQLGRVANRPKLVYFRECKNVEIKGVTMMNPAFWTQTYDQCENLLIDGITVHSRA 201
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +I +D DDAIC K+++ N+ ++ + + +S IK
Sbjct: 202 YW-NNDGMDIVDCNGALIQNCYVDATDDAICLKSHSADAVCQNIEVRNNTVCSSASGIKF 260
Query: 251 GSASWFDFKALVFDNITI 268
G+AS FK + N T+
Sbjct: 261 GTASTGGFKNIKIINNTV 278
>gi|255533000|ref|YP_003093372.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345984|gb|ACU05310.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 524
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 29/281 (10%)
Query: 3 LLLLLSTTHIHIHS----VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
L +LL++ I + V +GAKGDG+ +T AIQ +IDAC + +V FP G ++
Sbjct: 12 LFILLTSISILTRAADVEVTTYGAKGDGLTVNTTAIQKSIDACA-ASGGGKVIFPAGHFM 70
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDYP----------EESSRWYVVLAENATDVGIT 108
+AT+ LKS+VTL + + TL G +YP E ++ ++ A A ++GI
Sbjct: 71 SATVVLKSNVTLYLSDGCTLTGVKGAANYPYQQVSIPFYGENWAKQALIFAHKAENIGIE 130
Query: 109 GGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
G G +DGQ F + N IK N RP L+ F+ C+ V+V V LR
Sbjct: 131 GPGTIDGQGASFEI--NTIKKPDRYMN----------RPYLIWFVACKKVSVKQVHLRNS 178
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT 228
A+W H + C++ I +SI+ N NND IDI+ N IT V D+ DD + K+ +
Sbjct: 179 AFWMQHYLGCEDVVIDGISIWNHSN-KNNDMIDIDGCKNVRITNVNGDSDDDGLTLKSTS 237
Query: 229 GPLY-NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ N+ ++ + + +K G+ S F+ + NI I
Sbjct: 238 KLISENIVISNCVFSSHCNGLKFGTESTGGFRNVTISNIVI 278
>gi|399028582|ref|ZP_10729769.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073673|gb|EJL64837.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 528
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 21/271 (7%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ ++G+K DG +T AIQ AIDA NK +V FP G++L+ +I LKS+VTL E +
Sbjct: 38 ITEYGSKADGKTINTIAIQKAIDAAFK-NKGGRVIFPKGKFLSGSIILKSNVTLYFEEGS 96
Query: 77 TLLGGPRIEDY-------------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVT 123
LLG +DY +++S+ ++LA A ++ + G G +DGQ +K +
Sbjct: 97 VLLGSTNPKDYVNMAFEGRPISPKNDDNSQMALILAHKANNIALKGKGTIDGQGLKLALN 156
Query: 124 KNEIKNVMVSWNHTGACS----GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ + + VS + + + RP+L F C V V ++ E + W L C
Sbjct: 157 IDSLHHAGVSIDPKYSLRRNRPNETMRPKLFRFSQCDTVLVEGLKAGEASCWGLSFELCT 216
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYN--LTAT 237
N + ++ I + + NNDGIDI D N + I+ DD IC K+Y YN +
Sbjct: 217 NLTLDNLKIV-NRSYWNNDGIDITDCKNVKVVNCDINAADDGICLKSYYPGYYNDSVYIA 275
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
IR+ +SAIK G+AS+ FK + +I +
Sbjct: 276 SCTIRSSASAIKFGTASFGGFKNVTIKDIKV 306
>gi|154490368|ref|ZP_02030629.1| hypothetical protein PARMER_00601 [Parabacteroides merdae ATCC
43184]
gi|154088979|gb|EDN88023.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 489
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 18/258 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ AID N ++ F G YLT +I LKS+VT+++ E A L+
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFISE-NGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAVLV 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G DY E + WY ++LA ++GITG GV+DG+ E+ N ++ ++G
Sbjct: 89 GSTNPYDYDMELNAWYGLILANKQDNIGITGKGVIDGRG-------RELANNFINQVYSG 141
Query: 139 ACSGD------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP+LV F C+NV + V + PA+W +C+N I ++++
Sbjct: 142 VIKDKLQLGRVANRPKLVYFRECKNVEIKGVTMMNPAFWTQTYDQCENLLIDGITVHSRA 201
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +I +D DDAIC K+++ N+ ++ + +S IK
Sbjct: 202 YW-NNDGMDIVDCNGALIQNCYVDATDDAICLKSHSADAVCQNIEVRNNTACSSASGIKF 260
Query: 251 GSASWFDFKALVFDNITI 268
G+AS FK + N TI
Sbjct: 261 GTASTGGFKNIKIINNTI 278
>gi|423342234|ref|ZP_17319948.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
gi|409218148|gb|EKN11120.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
Length = 489
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 18/258 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ AID N ++ F G YLT +I LKS+VT+++ E A L+
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFISE-NGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAVLV 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G DY E WY ++LA ++GITG GV+DG+ E+ N ++ ++G
Sbjct: 89 GSTNPYDYDMELKAWYGLILANKQNNIGITGKGVIDGRG-------RELANNFINQVYSG 141
Query: 139 ACSGD------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP+LV F C+NV + V + PA+W +C+N I ++++
Sbjct: 142 VIKDKLQLGRVANRPKLVYFRECKNVEIKGVTMMNPAFWTQTYDQCENLLIDGITVHSRA 201
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +I +D DDAIC K+++ N+ ++ + +S IK
Sbjct: 202 -YWNNDGMDIVDCNGALIQNCYVDATDDAICLKSHSADAVCQNIEVRNNTACSSASGIKF 260
Query: 251 GSASWFDFKALVFDNITI 268
G+AS FK + N T+
Sbjct: 261 GTASTGGFKNIKIINNTV 278
>gi|146300859|ref|YP_001195450.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155277|gb|ABQ06131.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 479
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 24/280 (8%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTAT 61
+ L+ + I+ V +GAKGDG D AAIQ AID C +V P P +L
Sbjct: 12 FCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGG--RVLIPAPFTFLAGP 69
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDY--------PEESSRWYVVLAENATDVGITGGGVV 113
+KS V L+I A LL P + Y P E + W + EN D I+G G +
Sbjct: 70 FDVKSKVDLHIEAGAKLLASPDEKLYTKSAFRTNPGEGTIW--IGGENIEDFTISGSGKI 127
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + F+ + E V+ +N + RP ++ +G +N+ + +V + AYW +
Sbjct: 128 DGNGISFMGEEQEDAYVLKPFNVL------DPRPHVLTIIGGKNIRIHDVHIGNSAYWTI 181
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT----- 228
H+V C++ I +++ N+DGID++ S N I+ I++GDD IC K
Sbjct: 182 HLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEEF 241
Query: 229 GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
G N+T T+ + + S AIK+GS + + +VF+N I
Sbjct: 242 GACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCII 281
>gi|402494827|ref|ZP_10841563.1| glycoside hydrolase family protein [Aquimarina agarilytica ZC1]
Length = 460
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 19/253 (7%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA+ D + +T AIQ AI+AC +V G Y+T T+ LK++V L IHE+ L
Sbjct: 29 DFGAQADTLTVNTIAIQKAINACHK-QGGGKVVVSNGTYITGTVLLKNNVHLVIHENGVL 87
Query: 79 LGGPRIEDYPE---------ESSRWYVVLAENATDVGITGGGVVDGQAMKFV---VTKNE 126
G DY + ++ A NA ++G++G G++DG F+ + K
Sbjct: 88 KGSSNPLDYQSIDMFTDATGQERGNCLIGAVNAKNIGVSGKGIIDGNGAAFLHKNLVKER 147
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ ++ N T + RP L+ F+ ++V ++LREPA W H + N I ++
Sbjct: 148 RRLHILESNKTFG----KNRPFLLRFVKSSKIHVKGIQLREPAAWTCHFYQSSNIQIEEV 203
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTATDSWIRTKS 245
SIY N NNDGID++ S+ I IDTGDDAIC KT + P +++ ++ ++++
Sbjct: 204 SIYSHANF-NNDGIDLDSSSAVSIKNCTIDTGDDAICFKTTSPIPTHDIKVSECSLKSEW 262
Query: 246 SAIKLGSASWFDF 258
AIK G+ S DF
Sbjct: 263 GAIKFGTESMGDF 275
>gi|354603313|ref|ZP_09021312.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
gi|353349190|gb|EHB93456.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
Length = 497
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 139/283 (49%), Gaps = 25/283 (8%)
Query: 1 VQLLLLLSTTHIHI--HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ + LL T + + V DFGAK DGI +T AIQ AIDA ++ F PG+YL
Sbjct: 9 LAIALLCGATQLSAKDYQVSDFGAKADGITLNTGAIQRAIDAVNE-RGGGRLVFGPGKYL 67
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQ 116
T +I LKS+VTL++ A LLG DY ++ RW +V A ++GITG G +DGQ
Sbjct: 68 TGSIYLKSNVTLHLERGAVLLGSTNPFDYVKDPYVRWMAMVFAMKQENIGITGKGTIDGQ 127
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLREP 168
K N MV + G + RP + F C NV + + LR+P
Sbjct: 128 GFK-------TANNMVQYIQRGIYEDPLKLDRPNETNRPENIYFRECTNVTITGITLRDP 180
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTP-NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
A W +C N ++ D IY + N+ NNDGIDI D + VI + DD +C K++
Sbjct: 181 ASWNQTYDQCKNVYVDD--IYVEANSYWNNDGIDIVDCDGVVIKNSFFNAADDVLCFKSH 238
Query: 228 TGP--LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+ + R+ ++ +K G+ S F+ NITI
Sbjct: 239 DANSICQNVVVDNCVGRSGANGLKFGTVSRGGFRNFKVTNITI 281
>gi|373460645|ref|ZP_09552396.1| hypothetical protein HMPREF9944_00660 [Prevotella maculosa OT 289]
gi|371955263|gb|EHO73067.1| hypothetical protein HMPREF9944_00660 [Prevotella maculosa OT 289]
Length = 433
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 17/276 (6%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL + T H ++V+ FGAKGDGI D AAIQ AID C V E++ I
Sbjct: 12 LLSVLTLHAQTYNVMAFGAKGDGITDDAAAIQRAIDRCSAEGGGRVVLPGRHEFMAGPIE 71
Query: 64 LKSHVTLNIHEDATLLGGP-----RIEDYPEESSRWYVVL-AENATDVGITGGGVVDGQA 117
LKS++ L++ A L P R+ + E + L A++A ++ +TG G + G
Sbjct: 72 LKSNIDLHLEATAVLKARPDAHVYRLSAFGENQGEGMLWLWAKHAVNLSVTGKGTIHGNG 131
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
++F+ + + S++ + D RP ++ + R++ + +V ++E AYW +H+V
Sbjct: 132 IRFMG-----RELADSYDLKPVTTFDP-RPHVLTLIDVRHLTIRDVTIKEGAYWTVHLVG 185
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLY 232
CD I + + + N DGID++ S N I+ I +GDD IC K G +
Sbjct: 186 CDGAVIDGIQLLNNLKIRNGDGIDLDHSRNIRISNCYITSGDDCICLKNRREFAEYGSCH 245
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ T+ +R++S AIK+GS + + FDN I
Sbjct: 246 DIVVTNCVMRSRSCAIKIGSENMDSIHHVSFDNCII 281
>gi|198275291|ref|ZP_03207822.1| hypothetical protein BACPLE_01450 [Bacteroides plebeius DSM 17135]
gi|198271874|gb|EDY96144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 511
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 17/281 (6%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L L T ++V+ GA GDG +T ++QSAIDA Q+ FP G YLT ++
Sbjct: 12 LFLCAGTIAATDYNVLQQGAVGDGKTLNTQSLQSAIDALH-AKGGGQLYFPAGRYLTGSL 70
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSR-----------WYVVLAENATDVGITGGG 111
+LKS+VTL + ++A LLG DYP S+ ++ AE A ++GI G G
Sbjct: 71 QLKSNVTLYLEKEAVLLGSTSPYDYPGFSTEKELKVNNDHFDQALIYAEGAENIGIMGEG 130
Query: 112 VVDGQAMKFVVTKNEIKNV--MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
+DGQ + +T + + + +V ++ RP+L+ CR V + R A
Sbjct: 131 CIDGQGRELALTIDSLHHTGELVDKHYNTYRKRPNTRPKLLFMRNCRKVELRKTNFRSGA 190
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
W L C + I + + + NNDGIDI D + I+ I++ DD IC K++
Sbjct: 191 AWGLSFSLCADLTIDSLHVE-NRAYWNNDGIDISDCKDVRISNCFINSADDGICLKSHNR 249
Query: 230 PLYN--LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+N ++ ++ I + +SAIK G+ S FK + DNI I
Sbjct: 250 GAWNDRVSISNCHIISSASAIKFGTESLGGFKNVTIDNIRI 290
>gi|423725590|ref|ZP_17699706.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
gi|409234037|gb|EKN26868.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
Length = 489
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 18/258 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ AID ++ F G YLT +I LKS+VT+++ E A L+
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFISESGG-GRLVFTVGRYLTGSIHLKSNVTIHLGEGAVLV 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G DY E + WY ++LA ++GITG GV+DG+ E+ N ++ ++G
Sbjct: 89 GSTNPYDYDMELNAWYGLILANKQDNIGITGKGVIDGRG-------RELANNFINQVYSG 141
Query: 139 ACSGD------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP+LV F C+NV + V + PA+W +C+N I ++++
Sbjct: 142 VIKDKLQLGRVANRPKLVYFRECKNVEIKGVTMMNPAFWTQTYDQCENLLIDGITVHSRA 201
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +I +D DDAIC K+++ N+ ++ + +S IK
Sbjct: 202 YW-NNDGMDIVDCNGALIQNCYVDATDDAICLKSHSADAICQNIEVRNNTACSSASGIKF 260
Query: 251 GSASWFDFKALVFDNITI 268
G+AS FK + N TI
Sbjct: 261 GTASTGGFKNIKIINNTI 278
>gi|317475804|ref|ZP_07935061.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
gi|316907964|gb|EFV29661.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
Length = 467
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 1 VQLLLLLSTTHIHI----HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE 56
++ LL+L +++ +SV DFGA+GDG +T AIQ ID C K +V P GE
Sbjct: 4 IKCLLVLGLFAVNVSAMDYSVSDFGARGDGKTVNTRAIQRVIDLC--AEKGGKVIIPQGE 61
Query: 57 YLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEES----------SRWYVVLAENATDVG 106
++T T+ LKS+VTL + A LLG + DYP+++ + +++A + +V
Sbjct: 62 FVTGTLFLKSNVTLRLERGAHLLGSTNLADYPKKTVGFRFWGDTWTYQSLIIAHDIENVT 121
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
I G G +DG+ F V + + RP L+ F RN+N+ + LR
Sbjct: 122 IEGDGTIDGRGGSFPVQSKKKPDKYRD------------RPYLLWFANSRNINITGIELR 169
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A W +RCD I + I+ N NND +DI+ + +ITRV D+ DD I K+
Sbjct: 170 NSAMWMQSYIRCDQLKIDGVRIFNHSNL-NNDMMDIDGCRDVIITRVTGDSDDDGITFKS 228
Query: 227 YTGPLY-NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ N+ +D + + +A+K G+ + FK + N I
Sbjct: 229 TCDRMSENIIVSDCLLSSHCNALKFGTETTAGFKNVAISNCVI 271
>gi|218129862|ref|ZP_03458666.1| hypothetical protein BACEGG_01443 [Bacteroides eggerthii DSM 20697]
gi|217987972|gb|EEC54297.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 467
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 30/283 (10%)
Query: 1 VQLLLLLSTTHIHI----HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE 56
++ LL+L +++ +SV DFGA+GDG +T AIQ ID C K +V P GE
Sbjct: 4 IKCLLVLGLFAVNVSAMDYSVSDFGARGDGKTVNTRAIQRVIDLC--AEKGGKVIIPQGE 61
Query: 57 YLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEES----------SRWYVVLAENATDVG 106
++T T+ LKS+VTL + A LLG + DYP+++ + +++A + +V
Sbjct: 62 FVTGTLFLKSNVTLRLERGAHLLGSTNLADYPKKTVGFRFWGDTWTYQSLIIAHDIENVT 121
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
I G G +DG+ F V + + RP L+ F RN+N+ + LR
Sbjct: 122 IEGDGTIDGRGGSFPVQSKKKPDKYRD------------RPYLLWFANSRNINITGIELR 169
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A W +RCD I + I+ N NND +DI+ + +ITRV D+ DD I K+
Sbjct: 170 NSAMWMQSYIRCDQLKIDGVRIFNHSNL-NNDMMDIDGCRDVIITRVTGDSDDDGITFKS 228
Query: 227 YTGPLY-NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ N+ +D + + +A+K G+ + FK + N I
Sbjct: 229 TCDRMSENIIVSDCLLSSHCNALKFGTETTAGFKNVAISNCVI 271
>gi|423346857|ref|ZP_17324545.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
gi|409219138|gb|EKN12102.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
Length = 489
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 18/258 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ AID ++ F G YLT +I LKS+VT+++ E A L+
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFISESGG-GRLVFTVGRYLTGSIHLKSNVTIHLGEGAVLV 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G DY E + WY ++LA ++GITG GV+DG+ E+ N ++ ++G
Sbjct: 89 GSTNPYDYDMELNAWYGLILANKQDNIGITGKGVIDGRG-------RELANNFINQVYSG 141
Query: 139 ACSGD------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP+LV F C+NV + V + PA+W +C+N I ++++
Sbjct: 142 VIKDKLQLGRVANRPKLVYFRECKNVGIKGVTMMNPAFWTQTYDQCENLLIDGITVHSRA 201
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +I +D DDAIC K+++ N+ ++ + +S IK
Sbjct: 202 YW-NNDGMDIVDCNGALIQNCYVDATDDAICLKSHSADAVCQNIEVRNNTACSSASGIKF 260
Query: 251 GSASWFDFKALVFDNITI 268
G+AS FK + N TI
Sbjct: 261 GTASTGGFKNIKIINNTI 278
>gi|336413111|ref|ZP_08593464.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
gi|335943157|gb|EGN04999.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
Length = 486
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ FGA GD +T A+Q AID C +V PPG Y+T TI L+S+V L++ +
Sbjct: 38 ITQFGAVGDAATLNTKALQMAIDTCAETGGG-EVTVPPGTYITGTIYLRSNVELHLCRGS 96
Query: 77 TLLGGPR-IEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
+ G R EDYP S +++A++ + GI+G G++DG A KN N
Sbjct: 97 IIRGSYRNPEDYPTRS----LIVADSIENAGISGSGIIDGNAQHPEFQKNYRLN------ 146
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
D RP + + C+ +++ ++ +R+ A W + + CD + +SI+ +
Sbjct: 147 -------DGKRPYAIYYKDCKRMSLRDIEVRDAAGWTIRLFHCDGVIVDGISIF-SLSMG 198
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY---NLTATDSWIRTKSSAIKLGS 252
NNDGID+ D+ N IT I+ DD IC K+ P + N+T T+ I + + IK G+
Sbjct: 199 NNDGIDV-DARNVNITNCHIECDDDGICLKS-DDPNFMVENITVTNCIIASNCNPIKFGT 256
Query: 253 ASWFDFKALVFDNITI 268
ASW F+ + F N I
Sbjct: 257 ASWAGFRNITFSNCVI 272
>gi|224536548|ref|ZP_03677087.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521804|gb|EEF90909.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
Length = 525
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 136/274 (49%), Gaps = 26/274 (9%)
Query: 3 LLLLLSTTH-----IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
L+LL+ +H I++V D+G K + +TA++Q ID C N V P G Y
Sbjct: 9 LVLLVCISHPSKATSFIYNVTDYGVKANSGRSETASLQKIIDLCST-NGGGTVCIPTGTY 67
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYPE-ESSRWYVVLAENATDVGITGGGVVDGQ 116
++ T+ LK++V L + A L G + +YPE + R ++ AEN + GI G GV+D
Sbjct: 68 ISGTLFLKNNVMLFLDRGAVLRGSSDLNEYPELRTHRKGLIHAENVHNTGICGSGVIDAN 127
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
V H GA S D R F GC +++ NV L +YW L I
Sbjct: 128 GNDTVF-------------HGGAKSPD--RIYAANFEGCSQIDIRNVSLINASYWTLRIS 172
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNL 234
CD+ IR ++I + NNDGID+ D N ++ ID DDAIC K+Y P N+
Sbjct: 173 DCDHVQIRGITIRST-SYFNNDGIDL-DGRNITVSDCIIDCIDDAICLKSYYKERPCENI 230
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ + + +AIKLG+AS FK + N I
Sbjct: 231 AISNCIVSSNCNAIKLGTASRGGFKNIAISNCVI 264
>gi|399028719|ref|ZP_10729875.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073555|gb|EJL64725.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 24/276 (8%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRLK 65
L+ ++ V +GAKGDG D AIQ AIDAC QV P P +L+ +K
Sbjct: 16 LTAVAQKVYDVKKYGAKGDGKTNDAIAIQKAIDACSK--TGGQVLIPAPFTFLSGPFNVK 73
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQA 117
S+V L+I A +L P + Y E + R W + +N + I+G G +DG
Sbjct: 74 SNVDLHIEGGAKILASPDEKLYTESAFRDNKGEGTIW--IGGKNIENFTISGSGKIDGNG 131
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ F+ + E V+ +N + RP ++ +G +N+ + +V + AYW +H+V
Sbjct: 132 ISFMGAEEEDAYVLKPFNIL------DPRPHVLTIIGGKNIRIKDVHIGNSAYWTVHLVG 185
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLY 232
C++ I +++ N+DGID++ S N I+ I++GDD IC K G
Sbjct: 186 CNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEEFGACE 245
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+T T+ + + S AIK+GS + + +VF+N I
Sbjct: 246 NITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCII 281
>gi|427384862|ref|ZP_18881367.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
gi|425728123|gb|EKU90982.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
Length = 525
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 136/274 (49%), Gaps = 26/274 (9%)
Query: 3 LLLLLSTTH-----IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
L+LL+ +H I++V D+G K + +TA++Q ID C N V P G Y
Sbjct: 9 LILLVCISHPSKAASFIYNVADYGVKANSGKSETASLQKIIDLCST-NGGGTVCIPTGTY 67
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYPE-ESSRWYVVLAENATDVGITGGGVVDGQ 116
++ T+ LK++V + A L G + +YPE + R ++ AEN ++GI G GV+D
Sbjct: 68 ISGTLFLKNNVMFFLDRGAVLRGSSDLNEYPELRTHRKGLIHAENVHNIGICGSGVIDAN 127
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
V H GA S D R F GC +++ NV L +YW L I
Sbjct: 128 GNDTVF-------------HGGAKSPD--RIYAANFEGCSQIDIRNVSLINASYWTLRIS 172
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNL 234
CD+ IR ++I + NNDGID+ D N ++ ID DDAIC K+Y P N+
Sbjct: 173 DCDHVQIRGITIRST-SYFNNDGIDL-DGRNITVSDCIIDCIDDAICLKSYYKERPCENI 230
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ + + +AIKLG+AS FK + N I
Sbjct: 231 AISNCIVSSNCNAIKLGTASRGGFKNIAISNCVI 264
>gi|372210444|ref|ZP_09498246.1| polygalacturonase [Flavobacteriaceae bacterium S85]
Length = 469
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V D+GA DG +T AIQ+ IDAC V G +++ T+ LK HVTL+I E+
Sbjct: 24 NVNDYGALADGKTVNTKAIQNTIDACAKAGGGTVV-LEGGTFVSGTLLLKDHVTLHIKEN 82
Query: 76 ATLLGGPRIEDYPE---------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK-- 124
+TLLG DY + +V A +A +V ITG G +DGQ F K
Sbjct: 83 STLLGSSNPNDYQSIDAFVDATGQLRGKCLVGAIDAKNVAITGKGTIDGQGHLFTRAKVK 142
Query: 125 ------------NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+E+K + G G+ RP L+ + V + ++ LR+PA W
Sbjct: 143 ETLKKLGQKEKVDEVKTNNNKALYAGGKVGNFDRPFLLRLVRVNGVQLKDIHLRQPAAWT 202
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-TYTGPL 231
+H +C N + + I+ N NND IDI+ S + I ID+GDDAIC K T P
Sbjct: 203 VHFFQCTNFLVDGIDIHSHAN-KNNDAIDIDSSTHGEIKNCTIDSGDDAICFKSTSPKPS 261
Query: 232 YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ I+++ AIK G+ S DF NITI
Sbjct: 262 SDVVVKKCKIKSEWGAIKFGTESMGDFT-----NITI 293
>gi|224537414|ref|ZP_03677953.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520940|gb|EEF90045.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
Length = 495
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S++DFGAK DG+ +T IQ AID ++ F G YLT TI LKS+VTL++ +
Sbjct: 25 YSIMDFGAKPDGVTLNTHTIQYAIDYVHTAGG-GKLIFDAGNYLTGTIYLKSNVTLHLAQ 83
Query: 75 DATLLGGPRIEDYPEES--SRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
A LLG DY ++ R ++ A ++GITG G ++G+ F+V N ++
Sbjct: 84 GAVLLGSYNALDYKKDEYIQRTALLFAVRQDNIGITGEGTINGRG--FIVANN-----LI 136
Query: 133 SWNHTGACSG-------DEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
S+ G DE RP + F CRNV V VR+ +PA W +C I
Sbjct: 137 SYIQRGLIDDPLHMDRPDEINRPHNIYFRECRNVRVEGVRMHDPASWNQAYDQCRQVIID 196
Query: 185 DMSIYGDFNTP-NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWI 241
++++ D + NNDGIDI D ++ I+ D DD IC K++ + N+ + I
Sbjct: 197 NINV--DCKSYWNNDGIDIVDCDSVRISNSFFDAADDGICFKSHEPSQICQNVVVDNCII 254
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
R+ +S +K G+AS F+ + N+TI
Sbjct: 255 RSSASGLKFGTASKGGFRDFIIKNLTI 281
>gi|423226670|ref|ZP_17213135.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628197|gb|EIY22231.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 495
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S++DFGAK DG+ +T IQ AID ++ F G YLT TI LKS+VTL++ +
Sbjct: 25 YSIMDFGAKPDGVTLNTHTIQYAIDYVHTAGG-GKLIFDAGNYLTGTIYLKSNVTLHLAQ 83
Query: 75 DATLLGGPRIEDYPEES--SRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
A LLG DY ++ R ++ A ++GITG G ++G+ F+V N ++
Sbjct: 84 GAVLLGSYNALDYKKDEYIQRTALLFAVRQDNIGITGEGTINGRG--FIVANN-----LI 136
Query: 133 SWNHTGACSG-------DEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
S+ G DE RP + F CRNV V VR+ +PA W +C I
Sbjct: 137 SYIQRGLIDDPLHMDRPDEINRPHNIYFRECRNVRVEGVRMHDPASWNQAYDQCRQVIID 196
Query: 185 DMSIYGDFNTP-NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWI 241
++++ D + NNDGIDI D ++ I+ D DD IC K++ + N+ + I
Sbjct: 197 NINV--DCKSYWNNDGIDIVDCDSVRISNSFFDAADDGICFKSHEPSQICQNVVVDNCII 254
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
R+ +S +K G+AS F+ + N+TI
Sbjct: 255 RSSASGLKFGTASKGGFRDFIIKNLTI 281
>gi|395804712|ref|ZP_10483947.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433100|gb|EJF99058.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 509
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 21/280 (7%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
V + L+ + + + +GA GDG +T AIQ AIDA +K ++ F G +L+
Sbjct: 10 VVFCVCLTVSAQKVFDIKKYGAVGDGKTLNTKAIQKAIDAANK-SKGGRILFSKGTFLSG 68
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF 120
+I LKS+V L EDA LLG +DYP+ +++A + ++ + G G+++GQ +
Sbjct: 69 SIVLKSNVELFFEEDAVLLGSTNPDDYPKYEGIRALIIAAESKNMAVKGKGIINGQGREL 128
Query: 121 VVTKNEIKNVMVSWNHTGA----------CSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+ + S +HTG ++ R +L+ F+ C ++ + ++ L+
Sbjct: 129 ALA-------IDSLHHTGVRIDPKYNYRRMRPEDGRGKLISFVKCDSITMTDITLKNSPG 181
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
W C N I M + NNDGID++ N IT ++T DD IC K+
Sbjct: 182 WTQCFRECKNIVIDFMKVESRAYW-NNDGIDVDGCENVRITNCNVNTADDGICLKSEVPG 240
Query: 231 LY--NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
L+ N+ + IR+ ++A+K G+ S+ FK + +NI +
Sbjct: 241 LHNNNIYIGNCTIRSSANAVKFGTGSYGSFKNVTIENIKV 280
>gi|427388349|ref|ZP_18884232.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
gi|425724932|gb|EKU87806.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
Length = 475
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 137/279 (49%), Gaps = 28/279 (10%)
Query: 3 LLLLLSTTHIH--IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
LL ++ T++H H++ FGAK DG+ T AIQ AID K +V P G+++T
Sbjct: 8 LLTIIPFTYVHGADHNITSFGAKADGVTVSTEAIQKAIDESSA--KGGRVIIPTGDFVTG 65
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEESS--RWY--------VVLAENATDVGITGG 110
T+ LK + TL I ++A LLG ++ DYP+ + R++ +++A N ++ I G
Sbjct: 66 TLFLKDNTTLVIEKNARLLGSKKLSDYPKTTVGFRFFGDTWVYQSLIIAHNVNNITIEGE 125
Query: 111 GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
G +DGQ F VT + RP L C+N+ V N+ LR A
Sbjct: 126 GTIDGQGEAFPVTTKVKPDRYRD------------RPYLFWIADCKNITVKNIELRSSAM 173
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
W +RC+ I + ++ N NND +DI+ + VIT V D DD I K+ T
Sbjct: 174 WLQSYIRCEKLRIDGIRVFNHAN-KNNDLMDIDGCKDVVITNVVGDADDDGITFKSTTDR 232
Query: 231 LY-NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ N+ ++ + + +AIK G+ S F+ + N I
Sbjct: 233 ISENIVVSNCILSSHCNAIKFGTESTTGFRNITITNCVI 271
>gi|146300860|ref|YP_001195451.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155278|gb|ABQ06132.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 509
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 21/274 (7%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
LS + + + +GA GDG +T AIQ AIDA +K +V F G +L+ +I LKS
Sbjct: 16 LSVSAQKVFDIKKYGAVGDGKTLNTKAIQKAIDAANK-SKGGKVLFSKGTFLSGSIVLKS 74
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
V L E A LLG EDYP+ ++A ++ ++ + G G++DGQ + +
Sbjct: 75 DVELFFEEGAILLGSTNPEDYPKYDGIRAFIIASDSKNIAVNGKGIIDGQGRELALA--- 131
Query: 127 IKNVMVSWNHTGA----------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ S +HTG ++ R +L+ F+ C ++ + + L+ W
Sbjct: 132 ----IDSLHHTGVRIDPKYNYRRMRPEDGRGKLISFVKCDSITMTQITLKNSPGWTQCFR 187
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NL 234
C N I M + NNDGID++ N IT ++ DD IC K+ L+ N+
Sbjct: 188 ECKNIIIDFMKVESR-AYWNNDGIDLDGCENARITNCNVNAADDGICLKSEVPGLHNNNI 246
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ IR+ ++A+K G+ S+ FK + +NI +
Sbjct: 247 YIGNCTIRSSANAVKFGTGSYGSFKNVTIENIKV 280
>gi|427385171|ref|ZP_18881676.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
gi|425727339|gb|EKU90199.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
Length = 495
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 137/262 (52%), Gaps = 13/262 (4%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S++DFGAK DG+ +T IQ AID ++ F G YLT TI LKS+VTL++ +
Sbjct: 25 YSIMDFGAKPDGVTLNTHTIQYAIDYIHTAGG-GKLIFDTGNYLTGTIYLKSNVTLHLAQ 83
Query: 75 DATLLGGPRIEDYPEES--SRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
A LLG DY ++ R ++ A ++G+TG G +DG+ F+V N I ++
Sbjct: 84 GAVLLGSCNALDYKKDEYIQRTALLFAVQQDNIGVTGEGTIDGRG--FIVANNLISHIQR 141
Query: 133 SW--NHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
+ DE RP + F CRNV + +R+ +PA W +C I ++++
Sbjct: 142 GLIDDPLHMDRPDETNRPHNIYFRECRNVRIEGIRMHDPASWNQAYDQCRQVIINNINV- 200
Query: 190 GDFNTP-NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIRTKSS 246
D + NNDGIDI D ++ I D DD IC K++ + N+ + IR+ +S
Sbjct: 201 -DCKSYWNNDGIDIVDCDSVRINNSFFDAADDGICFKSHEPSQICQNVVVDNCIIRSSAS 259
Query: 247 AIKLGSASWFDFKALVFDNITI 268
+K G+AS F+ + N+T+
Sbjct: 260 GLKFGTASKGGFRDFIIKNLTV 281
>gi|329962021|ref|ZP_08300032.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530669|gb|EGF57527.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 477
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 116/241 (48%), Gaps = 24/241 (9%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DG T +Q AID C N V P GEYLT TI LK +VTL + E + ++G
Sbjct: 39 ADGKTITTRGLQKAIDDCSK-NGGGIVSLPAGEYLTGTIVLKKNVTLKLEEGSKIIGSRN 97
Query: 84 IEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
I DYP++ R ++ AE + ++ I G G +DG F N+ N
Sbjct: 98 ISDYPDKGRRKALIFAEKSDNISIIGRGEIDGNGAAF-NQGNDAPN-------------- 142
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP LV L C V V V+L +W VRCD I + + G N NNDG DIE
Sbjct: 143 --RPTLVLLLDCNKVKVNGVKLSNSGFWTFRFVRCDGVDISKVYVEGHANW-NNDGFDIE 199
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGPLY---NLTATDSWIRTKSSAIKLGSASWFDFKA 260
S N I +DT DDAIC K+ P Y N+T T+ + + + IK G+AS F+
Sbjct: 200 -SKNVTIRDCVLDTDDDAICFKS-EDPNYVVENITVTNCNLSSNCNYIKFGTASAGGFRN 257
Query: 261 L 261
+
Sbjct: 258 I 258
>gi|340347445|ref|ZP_08670554.1| polygalacturonase [Prevotella dentalis DSM 3688]
gi|433651208|ref|YP_007277587.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609537|gb|EGQ14409.1| polygalacturonase [Prevotella dentalis DSM 3688]
gi|433301741|gb|AGB27557.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 440
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 19/270 (7%)
Query: 11 HIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVT 69
+ + V +GA GDG D AAIQ A+DAC QV FP G +L + LK++V
Sbjct: 21 QVKVFDVTAYGALGDGRTDDAAAIQRAVDACSAAGGG-QVYFPTGRTFLAGPVELKTNVE 79
Query: 70 LNIHEDATLLGGPRIEDYPE------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVT 123
L++ DATLL P Y + E + A++ ++ I+G G + G ++F+
Sbjct: 80 LHLDVDATLLANPDEAVYHKSAFGENEGEGMMWLWAKDVRNLRISGRGTIHGNGIRFMG- 138
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+ + S+ + D RP ++ +G N+ + V +RE AYW +H+V C++ I
Sbjct: 139 ----RELADSYELKPTTTFDP-RPHVLTLIGVENLQIHGVTIREGAYWTVHLVGCNDVVI 193
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATD 238
+++ + N DGIDI+ S N I I +GDD IC K GP ++T T+
Sbjct: 194 DGVNLLNNLKIRNGDGIDIDHSRNVRIANCHITSGDDCICLKNRREFAAYGPCRDITVTN 253
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + + DN I
Sbjct: 254 CTMSSRSCAIKIGSENVDSICNVTIDNCVI 283
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 133/271 (49%), Gaps = 25/271 (9%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
D GA+GDG +T A+Q A+D V PPG++L+ + L+SHVTL++ A L
Sbjct: 34 DTGARGDGHTLNTNALQKAVDQAAAAGG-GVVVIPPGDFLSGGLVLRSHVTLHLEAGAIL 92
Query: 79 LGGPRIEDY------PEE--SSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK------ 124
G PR+EDY P E S+ +++ A +A D+ ITG G +DG F K
Sbjct: 93 RGSPRVEDYEYRPGPPVEGDSNGHHLLFALDAEDIAITGHGTIDGGGSAFWHRKGRSTPR 152
Query: 125 -NEIKNVMVSWNHTGACSGDECRPR-LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
++ +++W++ A RP ++ CRNV + V L W L V C+
Sbjct: 153 PEDLWGDVIAWDYEPATPR---RPSPMIELARCRNVRIEGVTLTNAPGWTLRPVACETVL 209
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-----PLYNLTAT 237
IR + + PN DG+DI N ++ I TGDDAIC K+ P N+T T
Sbjct: 210 IRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKSENPYGELLPTKNITVT 269
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ + T + K+G+++ + +VF N I
Sbjct: 270 NCVLSTCCNGFKVGTSTHGRVENIVFSNSVI 300
>gi|375144070|ref|YP_005006511.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058116|gb|AEV97107.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 511
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 2 QLLLLLST---THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
LL+LLS+ + + FGAKGD +T AIQ AID N +V P G ++
Sbjct: 8 HLLILLSSGIFAQQKNYDITTFGAKGDSSTNNTVAIQKAIDEAS-ANGGGRVVIPAGRFV 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAM 118
T + LKS+V L++ +A LLG + DY + +V AE + ITG G +DG+
Sbjct: 67 TGVLNLKSNVELHVSANAMLLGSTKRTDYGTVKASALIV-AEKQHHISITGTGTIDGRGR 125
Query: 119 KFVVTKNEIKNVMV----SW---NHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAY 170
+ V + + SW N G DE RP L+ F C +V + + L++ A
Sbjct: 126 EVVADVDRMLKAGTLQDPSWQTVNPWGQKRSDESNRPHLLTFGKCDHVTIKGILLKDAAC 185
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
W C N I + + NNDGIDI++ N ITR ++ DD IC K+
Sbjct: 186 WVETYHECSNLTIDSIRVQSTAYY-NNDGIDIDNCKNVKITRCNVNADDDGICLKSNNDQ 244
Query: 231 LY--NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+ +D +R+ +SA+K G+AS FK ++ N+ I
Sbjct: 245 AICENVEISDCVVRSSASALKFGTASHGGFKNVMVKNLEI 284
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GAKGDG+ DTAAIQ AIDAC V PG YL+A I LKS++TL + + ATLL
Sbjct: 38 YGAKGDGVSKDTAAIQHAIDACAKRGG-GTVLLTPGTYLSAPIVLKSNITLKLEKGATLL 96
Query: 80 GGPRIEDYP-----EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
G P DYP R ++ A+NA+++ I G G ++G + E K+
Sbjct: 97 GSPDFNDYPAITEFRAPGRQSLISAQNASNITIEGAGTINGNGASWWKMAREHKD----- 151
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
TG RPRL+ F C++V + V + W + D+ IR++ + +
Sbjct: 152 --TGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRNIHVLAPQHA 209
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
PN D ID S++ +I V + GDD I K+
Sbjct: 210 PNTDAIDPFSSSHVLIEHVVANVGDDDIAIKS 241
>gi|345300045|ref|YP_004829403.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093982|gb|AEN65618.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 441
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 54 PGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVG 106
PG YLT T+ L SH+TL++ A LL R EDY E S ++ A +A V
Sbjct: 41 PGLYLTGTLVLSSHITLHLEAGARLLASHREEDYQAAVTQSMAELSHMALIYARDARGVT 100
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
++G G +DG A + + + + G RPRLV F C V + N+ L
Sbjct: 101 LSGAGCIDGNATAWFEPQADAQ---------GYRQPKTRRPRLVVFESCEQVRISNITLY 151
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W H+V C++ FIR+++I D N D +DI+ + I+ DD IC KT
Sbjct: 152 DSPMWTAHLVSCNHVFIRNLTIDNDLALSNTDALDIDSCQHVHISDSYFSAADDGICLKT 211
Query: 227 ------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P+YN+T + IR+KS AIK+G+ + D + + +N I
Sbjct: 212 TAKAPELQQPVYNVTVNNCIIRSKSCAIKVGTETHADIRNIAVNNCVI 259
>gi|374375482|ref|ZP_09633140.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373232322|gb|EHP52117.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 493
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 26/283 (9%)
Query: 3 LLLLLSTTHIHI-----HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
+L +++ T I I ++++DFGAK DG+ ++A IQ AID N ++ F G Y
Sbjct: 7 ILAIVAITQIMIAQAKDYNIMDFGAKADGVTLNSAIIQHAIDYITQ-NGGGRLVFKEGRY 65
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY--VVLAENATDVGITGGGVVDG 115
LT TI LKS+VTL++ + A L G DY + + + ++ A ++GITG G++DG
Sbjct: 66 LTGTIFLKSNVTLHLEKGAVLFGSVNPLDYEKNTYVGWTAMIFAIKQQNIGITGEGMIDG 125
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLRE 167
+ + N MV+ G + + RP+ + F C NV + N+ L+
Sbjct: 126 RGFR-------TANNMVALIQKGIVNDPLKYDRPNETNRPQNIYFRECSNVRITNITLKN 178
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
PA W +C N ++ + + N NNDGID+ D ++ VI D DD IC K++
Sbjct: 179 PASWNQTYDQCKNLYVDGIKVDSK-NYWNNDGIDVVDCDSVVIKNSYFDAADDVICFKSH 237
Query: 228 --TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T N+ + R+ ++ +K G+ S F+ N+ I
Sbjct: 238 DATKICQNVVVDNCTGRSSANGLKFGTVSRGGFRNFKVTNLKI 280
>gi|427388107|ref|ZP_18883990.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
gi|425724690|gb|EKU87564.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
Length = 487
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL S+ V GAKGDG+ +T IQ A+D C V P G YL I
Sbjct: 14 LLFSSSLIAGTIDVTKRGAKGDGVTDNTIIIQKAVDECSKKGGG-TVLIPSGSYLIRPIE 72
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEE--------SSRWYVVLAENATDVGITGGGVVDG 115
LKS+V L++ LLG R+ DY + ++ A ++ ITG G +DG
Sbjct: 73 LKSNVNLHLDFGTLLLGSTRLSDYDHAFPFKDGTMNQSSGLLFARGQKNISITGFGTIDG 132
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ G RP+++ F+ CR++ V +V LR AYW H
Sbjct: 133 QGGD------------KAFQFGNDADGGPKRPKIIYFVECRDIVVTDVTLRNSAYWVQHY 180
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNL 234
+C++ IR + ++ N NNDG+DI D+ N I+ ID DDAIC K+ + N+
Sbjct: 181 EKCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNATISDCYIDVEDDAICFKSDHPEFCENI 238
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 239 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 272
>gi|261879890|ref|ZP_06006317.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333401|gb|EFA44187.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 439
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 23/280 (8%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTAT 61
L L ++ I++V+D+GA G+G+ D AAIQ AID C + +V FP G +L
Sbjct: 13 LPLQVALAQPKIYNVVDYGAVGNGVADDAAAIQRAIDQCS-ADGGGRVYFPVGRTFLAGP 71
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYP--------EESSRWYVVLAENATDVGITGGGVV 113
+ LKS++ L + +ATL P Y E W + A++ ++ I G G +
Sbjct: 72 VELKSNIELYLDVNATLKANPDERIYQLSAFGKNRGEGMMW--LWAKDIENLRIGGRGTI 129
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
G + F+ + + S+ + D RP ++ +G RN+ + ++ ++E AYW +
Sbjct: 130 HGNGVSFMG-----RELHDSYELKPTTTFDP-RPHVLTLIGVRNLRISDLTIKEGAYWTV 183
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT----- 228
H++ C++ I +S+ + N DGIDI+ S + I+ I +GDD IC K
Sbjct: 184 HLIGCEDAVIEGISLLNNLKIRNGDGIDIDHSRHVRISNCYITSGDDCICLKNRREYQEY 243
Query: 229 GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP +++T T+ + ++S AIK+GS + + DN I
Sbjct: 244 GPTHDITVTNCTMTSRSCAIKIGSENMDSIYNVTIDNCII 283
>gi|393789554|ref|ZP_10377675.1| hypothetical protein HMPREF1068_03955 [Bacteroides nordii
CL02T12C05]
gi|392651002|gb|EIY44668.1| hypothetical protein HMPREF1068_03955 [Bacteroides nordii
CL02T12C05]
Length = 901
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 128/257 (49%), Gaps = 30/257 (11%)
Query: 21 GAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG 80
G +G T +Q AIDAC K V P G YL I L+S++ L++ E A LLG
Sbjct: 396 GISNNGREDVTDLLQQAIDACSI--KKATVVVPKGRYLIRPIFLRSNMRLHLEEGAQLLG 453
Query: 81 GPRIEDY----PEESS--RWYVVLAENATDVGITGGGVVDGQ--AMKFVVTKNEIKNVMV 132
I+DY PE + +V +N +V +TG G++DG+ A F
Sbjct: 454 SRTIQDYRNAFPEAGAIETSALVFGKNIENVKVTGTGIIDGRGNAPDF------------ 501
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G GD RP+++ + CR+V V NV L+ A+W H + CD I+ + +Y
Sbjct: 502 ---QFGNGKGD--RPKVLHLVNCRDVVVENVTLQNSAFWTAHFLLCDGVKIKGVKVYSHS 556
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTATDSWIRTKSSAIKLG 251
N NNDG+DI DS N I ID DD IC K+ G P+ N+ + IRT +AIKLG
Sbjct: 557 NW-NNDGLDI-DSRNVEIEDCYIDCDDDGICMKSDRGIPVENVIVKNCTIRTNCNAIKLG 614
Query: 252 SASWFDFKALVFDNITI 268
+A FK + + + I
Sbjct: 615 TAGKAGFKNVSYTDCVI 631
>gi|420244676|ref|ZP_14748420.1| endopolygalacturonase [Rhizobium sp. CF080]
gi|398052527|gb|EJL44786.1| endopolygalacturonase [Rhizobium sp. CF080]
Length = 444
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
+TA IQSAID C V G + T +RL+S V L++ + A L P Y +
Sbjct: 16 ETARIQSAIDEVAARGGGC-VELAEGVHSTHGLRLQSGVELHLAKGALLRPVPDYGAYED 74
Query: 90 -------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
E S +++A NATD+ +TG G ++ F+ +E +V
Sbjct: 75 TSVSVIAEKSNRAMIVARNATDIALTGPGRIEAGGEHFIAGTDEAMGTLVPA-------- 126
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
E RPR+V F CR V + + + + W LH+V CDN ++ + + + PN DG+ +
Sbjct: 127 -EFRPRVVVFESCRGVRIERLEIMDSPMWTLHLVNCDNVYVAGVKVSNNQRMPNTDGLVL 185
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ + V+ I T DD IC KT GP N+ + +KS A+K+G+ S+
Sbjct: 186 DACRHAVVEDCIISTADDGICLKTSAGPDGRAIGECENVRVRRCLVESKSCALKIGTESY 245
Query: 256 FDFKALVFDNITI 268
DF +VF++ +
Sbjct: 246 GDFTNVVFEDCRV 258
>gi|393789566|ref|ZP_10377687.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
gi|392651014|gb|EIY44680.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
Length = 487
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL ST + GAKGDG+ +T IQ A+D C V P G YL I
Sbjct: 14 LLFSSTLFAVTIDITKRGAKGDGVTDNTVVIQKAVDECSAKGGG-TVLIPSGTYLIRPIE 72
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP-----EESSRWY---VVLAENATDVGITGGGVVDG 115
LKS+V L++ A +LG R+ DY +E S ++ A ++ +TG G +DG
Sbjct: 73 LKSNVNLHLDFGALVLGSTRLADYDHAFPYKEGSMNQSSGLLFARGQKNISLTGFGTIDG 132
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q NE S+ G RP+++ + C+ + V ++ LR AYW H
Sbjct: 133 QG------GNE------SFQFGNDADGGPKRPKIIYLVECQGIVVTDLTLRNSAYWVQHY 180
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNL 234
RC++ IR + ++ N NNDG+DI D+ N I+ ID DDAIC K+ + N+
Sbjct: 181 ERCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNATISDCYIDVEDDAICFKSDHPEFCENI 238
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 239 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 272
>gi|366052354|ref|ZP_09450076.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 416
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 119/253 (47%), Gaps = 23/253 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY--- 87
T AIQSAID C + G Y+ I LKS+VTLN+ ATL G E Y
Sbjct: 20 TEAIQSAIDKCNGADGGIVTVPGEGVYIIDGIELKSNVTLNVESGATLRGSGNEERYIRR 79
Query: 88 --PEESSR-----WYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGAC 140
P E R ++ A A ++ +TG G +DG KF+ + + + +
Sbjct: 80 PGPFELIRNNTPISGLIFANGANNIAVTGDGTIDGNFEKFIFPDQGSEQHLKFYKYP--- 136
Query: 141 SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
RP + F CR+V + N+ + +W +H+V C T I + I + PN DGI
Sbjct: 137 -----RPMMFYFENCRDVKISNLHIINSPFWTIHLVGCFKTEIDSIFINNEMRMPNTDGI 191
Query: 201 DIEDSNNTVITRVQIDTGDDAICPK-----TYTGPLYNLTATDSWIRTKSSAIKLGSASW 255
DI+ T I I TGDD ICPK G N+ I+T+SSAIK GS+S+
Sbjct: 192 DIDRGRETHIHDCTIVTGDDGICPKCTEETAKYGDCNNIKVERCNIKTRSSAIKFGSSSF 251
Query: 256 FDFKALVFDNITI 268
+F+ F ++ I
Sbjct: 252 GNFEDCYFTDLKI 264
>gi|189465212|ref|ZP_03013997.1| hypothetical protein BACINT_01557 [Bacteroides intestinalis DSM
17393]
gi|189437486|gb|EDV06471.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 487
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL S+ V GAKGDG+ +T IQ A+D C V P G YL I
Sbjct: 14 LLFSSSLIAGTIDVTKRGAKGDGVTDNTIIIQKAVDECSKKGGG-TVLIPSGSYLIRPIE 72
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEE--------SSRWYVVLAENATDVGITGGGVVDG 115
LKS+V L++ LLG R+ DY + ++ A ++ ITG G +DG
Sbjct: 73 LKSNVNLHLDFGTLLLGSTRLSDYDHAFPFKDGTMNQSSGLLFARGQKNISITGFGTIDG 132
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ G RP+++ F+ CR++ V +V LR AYW H
Sbjct: 133 QGGD------------KAFQFGNDADGGPKRPKIIYFVECRDIVVTDVTLRNSAYWVQHY 180
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNL 234
+C++ IR + ++ N NNDG+DI D+ N I ID DDAIC K+ + N+
Sbjct: 181 EKCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNATIFDCYIDVEDDAICFKSDHPEFCENI 238
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 239 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 272
>gi|423226766|ref|ZP_17213231.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627039|gb|EIY21080.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 487
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL S+ V GAKGDG+ +T IQ A+D C V P G YL I
Sbjct: 14 LLFSSSLIAGTIDVTKRGAKGDGVTDNTIIIQKAVDECSKKGGG-TVLIPSGSYLIRPIE 72
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEE--------SSRWYVVLAENATDVGITGGGVVDG 115
LKS+V L++ LLG R+ DY + ++ A ++ ITG G +DG
Sbjct: 73 LKSNVNLHLDFGTLLLGSTRLSDYDNAFPFKDGSMNQSSGLLFARGQKNISITGFGTIDG 132
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ G RP+++ F+ C+ + V +V LR AYW H
Sbjct: 133 QGGN------------KTFQFGNDADGGPKRPKIIYFVECKGIVVTDVTLRNSAYWVQHY 180
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNL 234
+C++ IR + ++ N NNDG+DI D+ N I+ ID DDAIC K+ + N+
Sbjct: 181 EKCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNATISDCYIDVEDDAICFKSDHPEFCENI 238
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 239 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 272
>gi|224537538|ref|ZP_03678077.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520851|gb|EEF89956.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
Length = 496
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL S+ V GAKGDG+ +T IQ A+D C V P G YL I
Sbjct: 23 LLFSSSLIAGTIDVTKRGAKGDGVTDNTIIIQKAVDECSKKGGG-TVLIPSGSYLIRPIE 81
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEE--------SSRWYVVLAENATDVGITGGGVVDG 115
LKS+V L++ LLG R+ DY + ++ A ++ ITG G +DG
Sbjct: 82 LKSNVNLHLDFGTLLLGSTRLSDYDNAFPFKDGSMNQSSGLLFARGQKNISITGFGTIDG 141
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ G RP+++ F+ C+ + V +V LR AYW H
Sbjct: 142 QGGN------------KTFQFGNDADGGPKRPKIIYFVECKGIVVTDVTLRNSAYWVQHY 189
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNL 234
+C++ IR + ++ N NNDG+DI D+ N I+ ID DDAIC K+ + N+
Sbjct: 190 EKCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNATISDCYIDVEDDAICFKSDHPEFCENI 247
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 248 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 281
>gi|319953998|ref|YP_004165265.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422658|gb|ADV49767.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 463
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 126/267 (47%), Gaps = 32/267 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
++V+D+GAKGDG DT A+Q+AIDAC N V P G+ L TI LK+ VTL I
Sbjct: 21 YNVLDYGAKGDGTSKDTKAVQAAIDACTK-NGGGNVIIPAGKTVLIGTIYLKNFVTLYIE 79
Query: 74 EDATLLGGPRIEDYPEES--SRWY--------VVLAENATDVGITGGGVVDGQAMKFVVT 123
A LLG P EDY ++ +R+ ++ A +A I G G +DG T
Sbjct: 80 NGAVLLGSPNYEDYTTDTHKNRYKNEPHMDRCLIFASDAKYFAIKGLGTIDGNGHPKYFT 139
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
K + RP ++ FL C N+ + V L PA W + CD +
Sbjct: 140 KEK-----------------GGRPMMMRFLNCTNIQLKEVTLINPAAWTSAWLYCDQIVV 182
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--GPLYNLTATDSWI 241
+ I N N DG+D + N + DT DD+IC +T P ++ T+
Sbjct: 183 DSIKIISRVNQ-NGDGLDFDGCTNVRVANSSFDTSDDSICLQTSRPDKPCKDIVITNCVF 241
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
+K +A+++G AS DF+++ N T
Sbjct: 242 TSKWAAMRIGLASRGDFESVTVSNCTF 268
>gi|374374693|ref|ZP_09632351.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231533|gb|EHP51328.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 515
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
V D+GAKGDG +T AIQ AIDAC V FP G Y++ T+ LK++VTL + +D
Sbjct: 23 KVTDYGAKGDGTTLNTVAIQKAIDACN-AKGGGHVIFPAGRYVSGTVLLKNNVTLQLEKD 81
Query: 76 ATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMKFVVTK-- 124
A ++G + DY W ++ A + +VGI G G VDGQ K +
Sbjct: 82 AWIIGSTDVNDYTNPDPFKDGLGVDVGWALIAAVDVKNVGIVGAGGVDGQGSKLKERQIL 141
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ + W RP L+ + C V V V L A W H + N +
Sbjct: 142 TDTRPESQRWGR---------RPFLLRVVRCDGVLVKGVSLNYSAAWTSHYFQSRNLQLE 192
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTATDSWIR 242
+ I +NDGIDI+ I+ I +GDDA+C KT + + N+ +D ++
Sbjct: 193 QLKIR-STGVAHNDGIDIDGCQEVRISNCDIVSGDDALCFKTTSSKMKCNNIIVSDMKLK 251
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ + IK+G+ S F+ + N I
Sbjct: 252 SNQAGIKMGTESMAGFENISIRNCVI 277
>gi|372208513|ref|ZP_09496315.1| glycoside hydrolase family protein [Flavobacteriaceae bacterium
S85]
Length = 464
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 132/279 (47%), Gaps = 31/279 (11%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-AT 61
++ ++ +V+DFGAK DG+ DT A+Q+AI+AC N V P G+ + T
Sbjct: 9 FIVFQTSIFAQTFNVLDFGAKADGLTKDTQAVQAAINACTE-NGGGTVLIPAGKTVVIGT 67
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYPEESSR----------WYVVLAENATDVGITGGG 111
I LK VTL++ A LLG P +DY ++ + ++ A A I G G
Sbjct: 68 IYLKDFVTLHVANGAVLLGSPHYKDYATDTHKNTYKNEPHMDRCLIFAHKAKSFAIEGYG 127
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
V+DG +KN +N D RP L+ F+ C ++ + NV L+ PA W
Sbjct: 128 VIDGNG--------SVKN----FNR----KKDNGRPMLLRFMDCSDIRLNNVTLQNPAAW 171
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--G 229
+ CD I + I N N DG+D + N ++ DT DD+IC +T
Sbjct: 172 TSAWLYCDQIAINGIKIKSRINH-NGDGLDFDGCTNVRVSNCSFDTSDDSICLQTSRPDK 230
Query: 230 PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P ++T ++ +K +A+++G AS DF + N T
Sbjct: 231 PCKDITISNCVFTSKWAAMRIGLASRGDFDGVTVSNCTF 269
>gi|393785430|ref|ZP_10373581.1| hypothetical protein HMPREF1071_04449 [Bacteroides salyersiae
CL02T12C01]
gi|392662403|gb|EIY55963.1| hypothetical protein HMPREF1071_04449 [Bacteroides salyersiae
CL02T12C01]
Length = 898
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 126/257 (49%), Gaps = 30/257 (11%)
Query: 21 GAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG 80
G +G T +Q AIDAC K V P G Y I L+S++TL + E A LLG
Sbjct: 391 GVSNNGRDDVTELMQQAIDACSM--KKATVIVPKGRYSIRPIFLRSNMTLKLEEGAQLLG 448
Query: 81 GPRIEDY----PEESS--RWYVVLAENATDVGITGGGVVDGQ--AMKFVVTKNEIKNVMV 132
I+DY PE + +V +N +V + G G++DG+ A F
Sbjct: 449 SRTIQDYRDAFPEAGAIETSALVFGKNIENVKVIGPGLIDGRGTAPDF------------ 496
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G GD RP+++ F+ C++V V NV L+ A+W H + CD I+ + IY
Sbjct: 497 ---QFGNSKGD--RPKVLHFVNCKDVVVENVTLQNSAFWTAHFLLCDGVKIKGVKIYSHS 551
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY-NLTATDSWIRTKSSAIKLG 251
N NNDG+DI DS N I ID DD IC K+ G N+T + IRT +AIKLG
Sbjct: 552 NW-NNDGLDI-DSRNVEIEDCYIDCDDDGICMKSDRGIFVENVTVKNCTIRTNCNAIKLG 609
Query: 252 SASWFDFKALVFDNITI 268
+A FK + + + I
Sbjct: 610 TAGKTGFKNITYTDCVI 626
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGAKGDG DT A+Q AIDA K + PG YLT ++ LKS++ L + + TL
Sbjct: 82 DFGAKGDGTTDDTNALQKAIDAT--AAKKATLVLQPGTYLTGSLFLKSNMALRLDKGVTL 139
Query: 79 LGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKFVVTKNEIKN 129
G IE YP + +R W L DV I G G +DG M F T + +N
Sbjct: 140 TGKQNIESYPRQKTRIAGIEIVWPSALLNVYEQADVHIYGEGTIDGNGMVFWQTFWDKRN 199
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNV-WNVRLREPAYWCLHI-----VRCDNTFI 183
V A D RPRL+ + + + + ++ +W L I V+ N I
Sbjct: 200 VYEGKGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVI 259
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLT 235
R+ S D P+ DGIDI+ S++ ++ + ID DDA+C K P ++
Sbjct: 260 RNNS---DGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVV 316
Query: 236 ATDSWIRTKSSAIKLGSAS 254
DS IR + + GS +
Sbjct: 317 IRDSIIRHAEAGVTFGSET 335
>gi|329956837|ref|ZP_08297405.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523594|gb|EGF50686.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 439
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++V +GAKG+G D+ AIQ AIDAC V P G YL+ATI LK +VTL + +
Sbjct: 7 YNVKKYGAKGNGRKMDSPAIQKAIDACHKAGGGT-VIVPAGTYLSATIVLKDNVTLRLEK 65
Query: 75 DATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQ--AMKFVVT 123
DA +LG + Y W +++A +A +V + G G +DGQ A+K
Sbjct: 66 DALILGTTDYKAYDNLDPFTEGLGIDVGWALMVAVDAKNVTLEGEGTIDGQGSALKARHI 125
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
K + + W RP L+ ++ C NV V V L+ W H +C N I
Sbjct: 126 KEDTRPEGQRWG---------LRPFLLRWVRCENVKVEGVTLKYAGAWTSHYFQCRNVNI 176
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTATDSWI 241
+++I F +NDGI+I+ + I+ I +GDDA+C KT + + ++ T+ +
Sbjct: 177 NNITIR-SFGVAHNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMGCDDIIITNMKL 235
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
++ + IK+G+ S F+ + N I
Sbjct: 236 KSNQAGIKMGTESMAGFENIKISNCHI 262
>gi|196231702|ref|ZP_03130559.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196224174|gb|EDY18687.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 510
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 127/248 (51%), Gaps = 18/248 (7%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GA GDG DTAA+Q AIDA VR G YL+ T+ LKS VTL I + ATLL
Sbjct: 30 YGAVGDGKTKDTAALQRAIDAA--AKVGGTVRLATGTYLSGTVILKSGVTLQIDKGATLL 87
Query: 80 GGPRIEDYPEESSRWYVVL-AENATDVGITGGGVVDGQAMKF------VVTKNEIKNVMV 132
G P+ DY + +RW ++ A ++ I G GV+DGQ +V + +I + +
Sbjct: 88 GSPQQADYTK--NRWLALIEARRQHNIAIVGDGVIDGQGTALAADVMRLVQEKKIVDPLA 145
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
S ++ RP+L+ L C V + + L+ + W + C++ + +++
Sbjct: 146 SHR-----PAEQNRPQLIELLECHGVTLKGITLKNSSCWVQTYLTCEDVTLDHVTVRSTA 200
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-YTGPLYNLTATDSWIRTKSSAIKLG 251
NNDG+D+ D + +T ID+ DD IC K+ ++ D +R+ ++A KLG
Sbjct: 201 YW-NNDGLDLVDCHRAHVTNCDIDSADDGICLKSGERHACTDIVVEDCTVRSSANAFKLG 259
Query: 252 SASWFDFK 259
++S FK
Sbjct: 260 TSSRGGFK 267
>gi|375149153|ref|YP_005011594.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361063199|gb|AEW02191.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 558
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 115/247 (46%), Gaps = 16/247 (6%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGAKGDG +T AIQ+AIDAC N V P G+++ T+ LKS+VTL++
Sbjct: 49 RIFNVRDFGAKGDGKTLNTKAIQAAIDACNKENGGT-VLIPAGDFICGTVELKSNVTLHL 107
Query: 73 HEDATLLGGPRIEDY------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
LLG R EDY P + + A NA ++ I G G +DG F K +
Sbjct: 108 SAQGRLLGSTRREDYVAGKGVPPGNGNVVFIFAVNAVNITIEGRGTIDGNGQTFYNGKGD 167
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
N + G G+ RP L+ F C N V +V L AY C I+ C ++ +
Sbjct: 168 --NTGPGQHGVG---GNFDRPHLIVFYECTNFLVRDVFLTRSAYHCFRILHCKQVQLQGI 222
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSS 246
IY N NNDG DS IT I DDA G +T T+ T+ S
Sbjct: 223 RIYNRVNK-NNDGFHFNDSQYVHITNCDIQCQDDAC---ALFGSNQFVTVTNCSFSTRWS 278
Query: 247 AIKLGSA 253
+ GS
Sbjct: 279 IFRFGSG 285
>gi|332665086|ref|YP_004447874.1| glycoside hydrolase [Haliscomenobacter hydrossis DSM 1100]
gi|332333900|gb|AEE51001.1| glycoside hydrolase family 28 [Haliscomenobacter hydrossis DSM
1100]
Length = 532
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 131/256 (51%), Gaps = 5/256 (1%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ FGA DGI + AIQ AID +V PPG +++ T+ LK+ VTL++
Sbjct: 30 KITSFGAIADGITNNVVAIQKAIDKVSKSGG-GKVIIPPGNFMSGTVFLKTGVTLHLELG 88
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVV-TKNEIKNVMVSW 134
A LLG DY + + R VV+AEN +GI+G G++DGQ + ++ ++++ +
Sbjct: 89 ARLLGPTNRNDYAKVADRPAVVMAENQHHIGISGQGIIDGQGQELMLDIFKKLRSGEMVQ 148
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
+ R ++ F C ++++ + L+ + W C N I +++
Sbjct: 149 DTIWKVKRPGGRTMVLNFKSCSDIHISGITLKNASDWVQDYRECSNLIIDGITVQSTAYW 208
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKLGS 252
NNDG+DI DS N I+ I++ DDAIC K+ L N+ + +R+ ++A+K G+
Sbjct: 209 -NNDGLDITDSKNVRISNCFINSTDDAICLKSENPALGCENVYIENCTLRSSANALKFGT 267
Query: 253 ASWFDFKALVFDNITI 268
S F+ + N+TI
Sbjct: 268 RSDGGFRKITVRNLTI 283
>gi|295132878|ref|YP_003583554.1| glycoside hydrolase [Zunongwangia profunda SM-A87]
gi|294980893|gb|ADF51358.1| glycoside hydrolase family protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 23/271 (8%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGE-YLTATIRLKSHV 68
+++ ++ DFGA D ++ +IQ ID C G K V P G+ YL+ LKS++
Sbjct: 1 MNLANIQDFGAVNDDFTNNSVSIQKTIDYCAALGGGK---VVIPAGKPYLSGPFNLKSNI 57
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYV------VLAENATDVGITGGGVVDGQAMKFVV 122
L++ A L P Y + + R + + EN + ITGGG +DG + F+
Sbjct: 58 ELHLEHGAVLKAYPDESVYTKSAFRQNMGEGTIWIGGENLNQISITGGGTLDGNGIFFMG 117
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
+ + + + RP ++ + C+N+ ++ V + AYW LH + C +
Sbjct: 118 DELHDSYELKPFETI------DPRPHMLTLVSCKNIKMYGVTVSNAAYWALHFIGCYDVA 171
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY-----TGPLYNLTAT 237
I ++S+Y D N+DGID++ N I+ I++GDD IC K GP N+ +
Sbjct: 172 IENISLYNDLKVRNSDGIDLDHCQNIRISNCHIESGDDCICLKNRREYEELGPCRNIVIS 231
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ + + S AIK+GS + + F+N I
Sbjct: 232 NCTLISTSCAIKIGSENMDSISHVTFNNCII 262
>gi|427388103|ref|ZP_18883986.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
gi|425724686|gb|EKU87560.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
Length = 473
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 123/247 (49%), Gaps = 24/247 (9%)
Query: 25 DGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRI 84
DG TA +Q AID C V P G+YLT T+ LK +VTLN+ + AT+LG I
Sbjct: 39 DGKTLTTAGLQKAIDDCARQGGGV-VSLPAGKYLTGTLVLKRNVTLNLEKGATILGSKNI 97
Query: 85 EDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDE 144
DYP++ R +V AE A ++ ITG G +DG F N+ N
Sbjct: 98 ADYPDKGRRKALVFAERADNISITGEGEIDGNGSAF-NKGNDAPN--------------- 141
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP LV L C V+V V+L +W VRCD I + + G N NNDG DIE
Sbjct: 142 -RPTLVLLLDCNKVHVNGVKLLNSGFWTFRFVRCDGVDISKVYVEGHANW-NNDGFDIE- 198
Query: 205 SNNTVITRVQIDTGDDAICPKTYTGPLY---NLTATDSWIRTKSSAIKLGSASWFDFKAL 261
S N IT +DT DDAIC K+ P Y N+T + + + + IK G+AS F+ +
Sbjct: 199 SRNVTITDCVVDTDDDAICFKS-EDPDYVVENVTVKNCDLSSNCNFIKFGTASAGGFRNI 257
Query: 262 VFDNITI 268
+ T+
Sbjct: 258 RVSDCTL 264
>gi|329961304|ref|ZP_08299450.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328531910|gb|EGF58730.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 490
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
LL ++ + GAKGDG+ +T IQ A+D C V P G YL +
Sbjct: 17 LLFSASLQAETIDITKRGAKGDGVTDNTVVIQKAVDECSRKGGG-TVLVPSGVYLIRPVE 75
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEE--------SSRWYVVLAENATDVGITGGGVVDG 115
LKS+V L++ A LL R+ DY + ++ A ++ +TG G +DG
Sbjct: 76 LKSNVNLHLDFGALLLASTRLSDYDNAFPFKDGSMNQSSALLYARGQKNISLTGFGTIDG 135
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ G RP+++ + C+ + V ++ LR AYW H
Sbjct: 136 QGGS------------KTFQFGNDADGGPKRPKIIYLVECKGIVVADLTLRNSAYWVQHY 183
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL-YNL 234
+C++ IR + ++ N NNDG+DI D+ N VI+ ID DDAIC K+ L N+
Sbjct: 184 EKCEDVTIRGLKVFSHCNY-NNDGLDI-DAKNAVISDCYIDVEDDAICFKSDHPELCENI 241
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T T+ + +AIK G+AS ++ + N +
Sbjct: 242 TVTNCVTASNCNAIKFGTASHGGYRNIAVSNCVV 275
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 28/289 (9%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L+L S V DFGAKGDG DTAAIQ AIDA + V F PG YL+ +I
Sbjct: 15 LMLASSAAFAGTVKVNDFGAKGDGSTMDTAAIQKAIDAAAKSH--GTVVFAPGTYLSGSI 72
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVV 113
+KS VTL + + T+LG RIEDYP +R W L D ITG G +
Sbjct: 73 FVKSGVTLQLDKGVTILGSQRIEDYPVMPTRVAGIEMSWPAALVNVYEQKDAVITGEGTI 132
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV-WNVRLREPAYWC 172
DG + + ++ A D RPRLV ++ + + LR +W
Sbjct: 133 DGDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWT 192
Query: 173 LHI-----VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT- 226
LHI V D IR+ P+ DGIDI+ S + V+ I DDA+C K
Sbjct: 193 LHICYSTDVTADGLTIRNNE---GGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAG 249
Query: 227 -------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P ++ DS IR ++ + GS + F+ + N+ +
Sbjct: 250 RDSDGLRVNRPTEDVVLRDSTIRDGAAGVTFGSETSGGFRNIEAYNLKV 298
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V++FGAKG+GI DT A + AI+AC + + P G Y T I LKS++TL I
Sbjct: 4 NVVEFGAKGNGIDKDTEAFKRAIEACEK-HGGGTIFVPAGIYHTGPIHLKSNMTLYIENG 62
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L IEDYP +RW ++ AENA +V + G G +DGQ K+
Sbjct: 63 AVLKFSQDIEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW------ 116
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
W RPR + F C NV + +++ W ++ + C N + ++
Sbjct: 117 -------WRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNV 169
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSW 240
I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 170 KIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKERIPCENITITNCI 229
Query: 241 IRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|402494826|ref|ZP_10841562.1| polygalacturonase [Aquimarina agarilytica ZC1]
Length = 465
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 131/276 (47%), Gaps = 33/276 (11%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTAT 61
LL ST + +V+D+GA G+GI DT A+Q AID +V P G+ L T
Sbjct: 12 FLLGCSTVFGQVFNVLDYGAVGNGIQKDTQAVQKAIDMAT-AQGGGKVIIPSGKKVLIGT 70
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY----------VVLAENATDVGITGGG 111
I LK +VTL + A LLG P IEDY + + + ++ A+ A + I G G
Sbjct: 71 IFLKDNVTLYLENGAVLLGSPTIEDYAQNTHKNMYKNEPHMDRCLIFAKEAHSIAIEGYG 130
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DG KN TG RP L+ FL C ++++ NV+L PA W
Sbjct: 131 TIDGNGFP--------KNFK---RETG-------RPMLIRFLNCTDIHINNVKLINPAAW 172
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-- 229
+ C+N + +SI N N DG+D + N +T DT DD+IC +
Sbjct: 173 TSAFLYCNNISVSGISIKSRANH-NGDGLDFDGCQNVNVTNSIFDTSDDSICLQASMPNI 231
Query: 230 PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
P N++ ++ +K + +++G S DF+++ N
Sbjct: 232 PCKNISISNCTFESKWAGMRIGLLSRGDFESVTVTN 267
>gi|299142129|ref|ZP_07035262.1| conserved hypothetical protein [Prevotella oris C735]
gi|298576218|gb|EFI48091.1| conserved hypothetical protein [Prevotella oris C735]
Length = 444
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLN 71
I++V+ FGAKG+G D AIQ AIDAC QV FP +L+ + LKS+V L+
Sbjct: 26 QIYNVMTFGAKGNGTTDDAVAIQHAIDACSR-EGGGQVVFPGNHVFLSGPLELKSNVDLH 84
Query: 72 IHEDATLLGGP-----RIEDYPEESSRWYVVL-AENATDVGITGGGVVDGQAMKFVVTKN 125
+ A L P + + E + L A +A ++ ++G G + G ++F+
Sbjct: 85 LEATAVLKANPDEQIYHLSAFGENRGEGMLWLWARHAENISVSGKGTIHGNGIRFMG--- 141
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ ++ S+ + D RP ++ RN+ + +V ++E AYW +H++ CD I
Sbjct: 142 --QELLDSYELKPVTTFDP-RPHVLTLTDVRNLTIRDVTIKEGAYWTVHLIGCDGAVIDG 198
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
+S+ N DGID++ S N I+ I +GDD IC K G +++ T+
Sbjct: 199 ISLLNHLKIRNGDGIDLDHSRNVRISNCYITSGDDCICLKNRREFAEYGSCHDIVVTNCV 258
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + + FDN I
Sbjct: 259 MTSRSCAIKIGSENMDSIYNVNFDNCII 286
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T +V +GA+G+G D+ AIQ AIDAC V P G YL+ATI LK +V
Sbjct: 19 TLQAETFNVKKYGARGNGKKMDSPAIQKAIDACHKAGGGT-VLVPAGTYLSATIVLKDNV 77
Query: 69 TLNIHEDATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMK 119
TL++ +DA +LG + Y W +++A +A +V + G G +DGQ
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPFTEGLGIDVGWALLVAVDAKNVALEGEGAIDGQGSA 137
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ +++ V G G RP L+ ++ C V V V L+ W H +C
Sbjct: 138 L-----KERHIKVDTRPEGQRWG--LRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCR 190
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTAT 237
N I +++I F +NDGI+I+ + I+ I +GDDA+C KT + ++ T
Sbjct: 191 NVNIHNVTIR-SFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCDDIIVT 249
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
D +++ + IK+G+ S F+ + N I
Sbjct: 250 DMKLKSNQAGIKMGTESMAGFENIKISNCHI 280
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T +V +GA+G+G D+ AIQ AIDAC V P G YL+ATI LK +V
Sbjct: 19 TLQAETFNVKKYGARGNGKKMDSPAIQKAIDACHKAGGGT-VLVPAGTYLSATIVLKDNV 77
Query: 69 TLNIHEDATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMK 119
TL++ +DA +LG + Y W +++A +A +V + G G +DGQ
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPFTEGLGIDVGWALLVAVDAKNVALEGEGAIDGQGSA 137
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ +++ V G G RP L+ ++ C V V V L+ W H +C
Sbjct: 138 L-----KERHIKVDTRPEGQRWG--LRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCR 190
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTAT 237
N I +++I F +NDGI+I+ + I+ I +GDDA+C KT + ++ T
Sbjct: 191 NVNIHNVTIR-SFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCDDIIVT 249
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
D +++ + IK+G+ S F+ + N I
Sbjct: 250 DMKLKSNQAGIKMGTESMAGFENIKISNCHI 280
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T +V +GA+G+G D+ AIQ AIDAC V P G YL+ATI LK +V
Sbjct: 19 TLQAETFNVKKYGARGNGKKMDSPAIQKAIDACHKAGGGT-VLVPAGTYLSATIVLKDNV 77
Query: 69 TLNIHEDATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMK 119
TL++ +DA +LG + Y W +++A +A +V + G G +DGQ
Sbjct: 78 TLHLEKDALILGTTDYKAYDNLDPFTEGLGIDVGWALLVAVDAKNVALEGEGAIDGQGSA 137
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ +++ V G G RP L+ ++ C V V V L+ W H +C
Sbjct: 138 L-----KERHIKVDTRPEGQRWG--LRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQCR 190
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTAT 237
N I +++I F +NDGI+I+ + I+ I +GDDA+C KT + ++ T
Sbjct: 191 NVNIHNVTIR-SFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCDDIIVT 249
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
D +++ + IK+G+ S F+ + N I
Sbjct: 250 DMKLKSNQAGIKMGTESMAGFENIKISNCHI 280
>gi|358065987|ref|ZP_09152521.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
gi|356695850|gb|EHI57475.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
Length = 425
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 29/261 (11%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I++++++GA GDG AAIQ AID C K +V P G +L+ ++LKS+V L +
Sbjct: 2 IYNILEYGAVGDGKTDCAAAIQKAIDRCSV--KGGRVVIPAGRFLSGFLQLKSNVELYLE 59
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN---- 129
A L + D +E +++++ A + ++ I+G G +DGQ V N
Sbjct: 60 HGAVL-----VSDLSDEEAKYFL-FACHGENITISGNGTIDGQGRLRFVDDNADHGAHEC 113
Query: 130 -VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
+ V+ N RPR F N+ V +V + A+W LH+ C N + + I
Sbjct: 114 PLFVAGN----------RPRTSYFEDIENLTVRDVTFYDAAFWTLHMAGCRNVMVDGVRI 163
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT------GPLYNLTATDSWIR 242
+ PNNDGID + N VI I++GDDAI K+ G N+ +
Sbjct: 164 LNNDRGPNNDGIDPDSCKNVVIRNCIIESGDDAIVVKSTKAMSEKYGSCENVVIQGCILH 223
Query: 243 TKSSAIKLGSASWFDFKALVF 263
T+ SA+K+G+ S+ D + ++F
Sbjct: 224 TRDSALKIGTESFGDIRNILF 244
>gi|354603307|ref|ZP_09021306.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
gi|353349184|gb|EHB93450.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
Length = 490
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 132/259 (50%), Gaps = 20/259 (7%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K +G +T AIQ AID ++ F G YLT +I LKS+VT++++E A LL
Sbjct: 30 FGIKSNGTTMNTTAIQKAIDYIHE-QGGGRLVFYVGRYLTGSIELKSNVTIHLNEGAVLL 88
Query: 80 GGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFV------VTKNEIKNVMV 132
G DY + W ++LA A ++G+TG GV+DGQ + + K IK+ +
Sbjct: 89 GSTNPYDYRQIPGTWLGLILANKAENIGVTGRGVIDGQGRETSYNYIDQIQKGVIKDEL- 147
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
++ + RP L+ C+NV + NV + A+W +C+N I +++ D
Sbjct: 148 KYDRPAS------RPTLIFLRECKNVEINNVTWKNSAFWVQIYDQCENLNIDRITV--DS 199
Query: 193 NTP-NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIRTKSSAIK 249
NNDGIDI D N +T D DDAIC K++ N+ ++ R+ +S IK
Sbjct: 200 KAFWNNDGIDIVDCNGVKLTNSFFDATDDAICLKSHDPKSICQNIEVSNCVARSSASGIK 259
Query: 250 LGSASWFDFKALVFDNITI 268
G+AS F+ + NI +
Sbjct: 260 FGTASRGGFRNIKMTNIKV 278
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
+L L++ +V +GA+G+G D+ AIQ AIDAC V P G YL+ATI
Sbjct: 13 MLFLITGASAETFNVKKYGARGNGKKLDSPAIQKAIDACHKAGGGT-VLVPAGTYLSATI 71
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVV 113
LK +VTL++ +DA +LG + Y W +++A +A +V + G G +
Sbjct: 72 VLKDNVTLHLEKDALILGTTDYKAYDNLDPFTEGLGIDVGWALLVAVDAKNVTLEGEGSI 131
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DGQ + +++ V G G RP L+ + C V V +V L+ W
Sbjct: 132 DGQGSAL-----KERHIKVDTRPEGKRWG--LRPFLLRLVRCEGVTVRDVTLKYAGAWTS 184
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY- 232
H +C N I +++I F +NDGI+I+ + I+ I +GDDA+C KT + +
Sbjct: 185 HYFQCRNVKIDNVTIR-SFGVAHNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMGC 243
Query: 233 -NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ + +++ + IK+G+ S F+ + N I
Sbjct: 244 DDIVVENMKLKSNQAGIKMGTESMAGFENIRISNCHI 280
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 12 IHIHSVID---FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
I+++ V D FGA+ DG TAAI +AI+ C V P G +LT +RLKSHV
Sbjct: 2 INLYGVFDIRTFGAQPDGETPSTAAITAAIETCAAAGGGV-VYIPAGRFLTGPLRLKSHV 60
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMK 119
L++ A LL DYP +RW + + E+ V ITG G +DG+
Sbjct: 61 RLHLEAGAHLLFSQDPADYPVLETRWEGKEVLTYAHQIYGEDLEGVAITGRGTIDGRGET 120
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ W A + RPRL+ F C+++ + V L W ++ V C+
Sbjct: 121 W-------------WRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCE 167
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------YTGPLYN 233
I ++I ++PN DGID + S N IT ID GDD I K Y P N
Sbjct: 168 RVTIDKVTIINPPDSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDSLYRTPCEN 227
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +R + +GS + + +V N
Sbjct: 228 IVIANCLMRHGHGGVVIGSETSGGIRKVVITN 259
>gi|224536494|ref|ZP_03677033.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223623|ref|ZP_17210092.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224521896|gb|EEF91001.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638248|gb|EIY32095.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 37/298 (12%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L+ LS + +++++D+GA D T AIQ AID C N V P G YLT ++
Sbjct: 13 FLINLSAANKAVYNIMDYGAIADTTILSTNAIQKAIDECAK-NGGGVVWVPSGNYLTTSV 71
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSR---------WYVVLAENATDVGITGGGVV 113
L+S+V L++ + L R+ DY + +++A N ++ +TG G +
Sbjct: 72 VLRSNVNLHLDAGSALYASRRVSDYKNHKIKVGASDAEAVEVILIALNENNISVTGTGKL 131
Query: 114 DGQAMKF------------VVTKNEIKNVMVSWNHTGACSGDECR-----PRLVGFLGCR 156
QA++ VT EI N + GA + R P + F C
Sbjct: 132 HCQAVREQFRREPQLAITDFVTGREIDNAI----KYGADYRTKYRKVPPCPGAINFTDCT 187
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQI 215
NV++ +V + E ++W +H+ CD ++ + I + N+DG+DI+ +N +I+ I
Sbjct: 188 NVHIKDVEVIESSFWAVHLQWCDRVYVDGIHIQSSSVDGVNSDGLDIDGCSNVMISNCVI 247
Query: 216 DTGDDAICPKT-----YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+TGDDA+C KT T P +T + + + S+A+K+G+ S DF+ + N I
Sbjct: 248 NTGDDALCLKTTRQNNETRPCRWITVNNCILTSSSAALKIGTESHADFENIAVSNCII 305
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 33/276 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V+DFGAK D + D AIQ+AID C V + + +I LK +V L++
Sbjct: 4 NVLDFGAKADRVTDDAPAIQAAIDVCSKAGGGRVVLEGGKHFYSGSIILKENVDLHLERG 63
Query: 76 ATLLGGPRIEDY--PEESSR----------------WYVVLAENATDVGITGGGVVDGQA 117
A L +E Y P R + + A++A ++ I+G G +DG A
Sbjct: 64 AVLQAHKALERYFHPNAGQRDDGVERVGTPVTLKPSYVFIYAKDADNIAISGEGAIDGNA 123
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
FV ++ V+ + RP LV C +++ +V +R +W LH
Sbjct: 124 YAFV---RQVSPYYVTGDFYP-------RPTLVYAEHCNHISFKDVIMRNAPFWTLHPAG 173
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLY 232
CD+ I + I D N N+DGID + S N I + DD IC K+ + GPL
Sbjct: 174 CDDVLISGLRILNDLNVANSDGIDPDHSTNVRIIGCHVTCADDCICLKSSSGNMEYGPLK 233
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+ + + + S+A+K+G+ DF+ +V DN I
Sbjct: 234 NVIISGCTLTSTSAALKIGTEGTGDFENVVVDNCII 269
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +GA+G+G D+ AIQ AIDAC V P G YL+ATI LK +VTL++ +D
Sbjct: 24 NVKKYGARGNGKKLDSPAIQKAIDACHKAGGGT-VLVPAGTYLSATIVLKDNVTLHLEKD 82
Query: 76 ATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQ--AMKFVVTK 124
A +LG + Y W +++A +A +V + G GV+DGQ A+K K
Sbjct: 83 ALILGTTDYKAYDNLDPFTEGLGIDVGWALLVAVDAKNVVLEGEGVIDGQGSALKERHIK 142
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ + W RP L+ ++ C ++ V V L+ W H +C N I
Sbjct: 143 IDTRPEGQRWG---------LRPFLLRWVRCEDIRVEGVTLKYAGAWTSHYFQCRNVNIH 193
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTATDSWIR 242
+++I F +NDGI+I+ + I+ I +GDDA+C KT + + ++ T+ ++
Sbjct: 194 NITIR-SFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTSSKMGCDDIIVTNMKLK 252
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ + IK+G+ S F+ + N I
Sbjct: 253 SNQAGIKMGTESMGGFENIKISNCHI 278
>gi|189465208|ref|ZP_03013993.1| hypothetical protein BACINT_01553 [Bacteroides intestinalis DSM
17393]
gi|189437482|gb|EDV06467.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 120/247 (48%), Gaps = 24/247 (9%)
Query: 25 DGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRI 84
DG T +Q AID C V P G+YLT T+ LK +VTLN+ + AT+LG I
Sbjct: 23 DGKTLTTTGLQKAIDDCARQGGGV-VSLPAGKYLTGTLVLKKNVTLNLEKGATILGSKNI 81
Query: 85 EDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDE 144
DYP + R +V AE A ++ ITG G +DG F N+ N
Sbjct: 82 ADYPNKGRRKALVFAERADNISITGEGEIDGNGSAF-NKGNDAPN--------------- 125
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP LV L C V V V+L +W VRCD I + + G N NNDG DIE
Sbjct: 126 -RPTLVLLLDCNKVYVNGVKLSNSGFWTFRFVRCDGVDISKVYVEGHANW-NNDGFDIE- 182
Query: 205 SNNTVITRVQIDTGDDAICPKTYTGPLY---NLTATDSWIRTKSSAIKLGSASWFDFKAL 261
S N IT +DT DDAIC K+ P Y N+T + + + + IK G+AS F+ +
Sbjct: 183 SRNVTITDCVVDTDDDAICFKS-EDPDYVVENVTVKNCDLSSNCNFIKFGTASAGGFRNI 241
Query: 262 VFDNITI 268
+ T+
Sbjct: 242 RVSDCTL 248
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 123/266 (46%), Gaps = 25/266 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I + +GA DG +TAAIQ AID C +V FP G +L+ TI LK VTL
Sbjct: 24 IIDITRYGAVADGKTINTAAIQKAIDECHQ-KGGGKVVFPAGSWLSGTIVLKDQVTLQFD 82
Query: 74 EDATLLGGPRIEDYPE---------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
+DA LLG I DY W +++A +A ++GI G G +DGQ K
Sbjct: 83 KDARLLGSTDINDYQNIDPFTDGLGVDVGWALLVAVDAKNIGIEGDGAIDGQGAK----- 137
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+K ++ + RP LV + C NV V + L A W H + I
Sbjct: 138 --LKEQQITTDTRPESQRWGRRPFLVRIVRCENVTVKGITLNYAAAWTSHYFQSKKITIE 195
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY--NLTATDSWIR 242
++ I +NDGIDI+ + I I +GDDA+C KT + N+ + ++
Sbjct: 196 NVKIV-SHGVAHNDGIDIDGCQDVRIKNCDIVSGDDALCFKTTASTMACSNIVVSGMRLK 254
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ AIK+G+ S F+NITI
Sbjct: 255 SNQGAIKMGTESMAP-----FENITI 275
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 20/265 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFGA GDGI +T IQ AID C + +V FP G +L+ T+ LK +VTL+ +
Sbjct: 25 YNIKDFGAVGDGITLNTLFIQKAIDKCN-NDGGGKVIFPAGRFLSGTVELKDNVTLHFEK 83
Query: 75 DATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+G ++DY W +++A +A ++G+ G GV+DGQ T
Sbjct: 84 NAELVGSTDLKDYRNLDPFTEGLGIDVGWALLVAVDAKNIGLEGEGVIDGQG-----TAL 138
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ K+++ G G RP L+ + C NVNV +V L+ W H + I +
Sbjct: 139 KEKHILTDTRPEGKRWG--LRPFLLRIVRCTNVNVKDVTLKYAGAWTSHYFQSRKINIEN 196
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRT 243
++I +NDGI I+ I + +GDDA+ KT + + ++ +D +++
Sbjct: 197 VTIR-SIGVAHNDGIGIDGCQEVRIKGCDVVSGDDALVFKTTSSKMGCKDIVVSDMKLKS 255
Query: 244 KSSAIKLGSASWFDFKALVFDNITI 268
AIK G+ S F+ + N I
Sbjct: 256 NQGAIKFGTESMAPFENIKISNCYI 280
>gi|417861727|ref|ZP_12506782.1| polygalacturonase [Agrobacterium tumefaciens F2]
gi|338822131|gb|EGP56100.1| polygalacturonase [Agrobacterium tumefaciens F2]
Length = 450
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 26/256 (10%)
Query: 28 HYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
H TA IQ AID +V G +++ ++LKS V L++ EDA L E Y
Sbjct: 14 HDATANIQRAIDTVSAAGGG-RVSLLAGRHVSGGLKLKSGVELHLAEDAVLAPASDYEAY 72
Query: 88 P--------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
EES+R +++A+ A+D+ +TG G ++ F+ +E +
Sbjct: 73 AHTTVSVIAEESNRG-MIIAKGASDIAVTGPGRIEAGGENFITGDDEAMGTYIPAAR--- 128
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
RPR + CRNV + N+ + W LH+V C++ R++ I D PN DG
Sbjct: 129 ------RPRAMVLESCRNVRLENLSVSGSPMWTLHMVDCEDLHFRNLRIENDRRLPNTDG 182
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGS 252
I ++ +I I T DD IC KT GP N+T + + S A+KLG+
Sbjct: 183 IVLDACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCDNITVRRCTVSSVSCALKLGT 242
Query: 253 ASWFDFKALVFDNITI 268
S+ DF +VF++ I
Sbjct: 243 ESFGDFTNVVFEDCKI 258
>gi|189465175|ref|ZP_03013960.1| hypothetical protein BACINT_01520 [Bacteroides intestinalis DSM
17393]
gi|189437449|gb|EDV06434.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 474
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 23/269 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNI 72
+++++D+GAKGDG+ D AAIQ+AI+ C V P G ++ + L S V L++
Sbjct: 28 VYNIMDYGAKGDGVTDDAAAIQTAINQCSKSGGG-TVLVPAGRTFMCSPFHLASFVELHL 86
Query: 73 HEDATLLGGP--------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
++ LL P D E W + ++ +V ITG G +DG + F+
Sbjct: 87 EPNSCLLANPDEAAYTLSAFRDNRGEGMMW--IYGQDLKEVSITGTGTIDGNGVSFMG-- 142
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K + S+ D RP ++ + + +V +R AYW +H++ C++ I
Sbjct: 143 ---KELEDSYELKPVTDFDP-RPHVLTLINIEKTVIRDVTIRNSAYWTVHLIGCNDASID 198
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDS 239
+SI + N DGID++ S N I I++GDD IC K G ++ T+
Sbjct: 199 GISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYGSCEDIVVTNC 258
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 259 TMVSRSCAIKIGSENMDKINNVLFNNCII 287
>gi|333382713|ref|ZP_08474380.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828446|gb|EGK01153.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
Length = 469
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+++ID+GAKGDG D AIQ+AI+AC V P G ++ + L S+V L +
Sbjct: 29 YNIIDYGAKGDGKTDDATAIQAAINACSQSGGG-TVLIPAGHTFMCSPFELASYVELRLE 87
Query: 74 EDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
++ LL P Y + + R W + ++ +V ITG G +DG + F+
Sbjct: 88 SNSRLLANPDETVYTQSAFRDNRGEGMMW--IHGKDLKEVSITGTGTIDGNGIAFMG--- 142
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K + S+ D RP ++ + + ++ +R AYW +H++ C++ I
Sbjct: 143 --KELEDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTVHLIGCNDASIDG 199
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
++I D N DGIDI+ S N I I++GDD IC K G ++ T+
Sbjct: 200 ITILNDLKIRNGDGIDIDHSKNVRIANCHIESGDDCICLKNRREFEEYGSCEDIVVTNCT 259
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 260 MISRSCAIKIGSENMDKINNVLFNNCII 287
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I +V +FGAKG+GI DT A + AI+ C + P G Y T I LKS++TL I
Sbjct: 2 IVNVREFGAKGNGIDKDTEAFKKAIEECEKQGGG-TIFVPAGIYHTGPIHLKSNMTLYIE 60
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L IEDYP +RW ++ AENA +V + G G +DGQ K+
Sbjct: 61 NGAVLKFSQDIEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW---- 116
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W RPR + F C NV + +++ W ++ + C N +
Sbjct: 117 ---------WRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVH 167
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
++ I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 168 NVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITN 227
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 228 CIMAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 124/267 (46%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++++ FGA GDG +T+AI+ A++AC G V P G ++T I LKS++ L++
Sbjct: 7 VYNIEQFGAVGDGWANNTSAIKRAVEACSQGGGG-TVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTK 124
+ LL EDYP SSRW + A +A ++ ITG G ++GQ +
Sbjct: 66 AGSELLFSNDREDYPVISSRWEGASRDVYMSCIYACHAKNIAITGFGTLNGQGAYW---- 121
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W + RP LV F C V+V V++ + W +H CDN I
Sbjct: 122 ---------WKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTIS 172
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
+SI N+PN DGI+ E N I+ ID GDD I K+ T P N+T T+
Sbjct: 173 AVSIVNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVIPCENITITN 232
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + GS D + +V N
Sbjct: 233 CTMLHGHGGVVFGSEMSGDIRNVVVSN 259
>gi|423725587|ref|ZP_17699703.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
gi|409234034|gb|EKN26865.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
Length = 493
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 21/266 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFG K DG +T++IQ ID ++ F G Y T TI LKS+VTL++ E
Sbjct: 24 YYATDFGVKADGKTLNTSSIQKGIDFVN-AQGGGRLVFTAGNYQTGTIYLKSNVTLHLEE 82
Query: 75 DATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
ATLLG DY ++ RW ++ A ++GITG G ++G+ + N MV
Sbjct: 83 GATLLGSTNPWDYEKDPYIRWMSMIFAVKQQNIGITGKGTINGRGF-------QTANNMV 135
Query: 133 SWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ G + RP+ + F C NV + ++ LR+PA W +C N ++
Sbjct: 136 DYIQRGIYEDPLKLGRPNETNRPQNIYFRECENVTIKDITLRDPASWNQTYDQCKNLYVD 195
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIR 242
+ + + NNDGID+ D + V+ ID DDA+C K++ N+ + R
Sbjct: 196 GIHVDSK-SYWNNDGIDVVDCDGVVLKNSFIDAADDALCFKSHDANSMCQNVVVENCVGR 254
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ +S +K G+ S F+ NI I
Sbjct: 255 SSASGLKFGTVSRGGFRNFKVKNIKI 280
>gi|423346854|ref|ZP_17324542.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
gi|409219135|gb|EKN12099.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
Length = 493
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 21/266 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFG K DG +T++IQ ID ++ F G Y T TI LKS+VTL++ E
Sbjct: 24 YYATDFGVKADGKTLNTSSIQKGIDFVN-AQGGGRLVFTAGNYQTGTIYLKSNVTLHLEE 82
Query: 75 DATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
ATLLG DY ++ RW ++ A ++GITG G ++G+ + N MV
Sbjct: 83 GATLLGSTNPWDYEKDPYIRWMSMIFAVKQQNIGITGKGTINGRGF-------QTANNMV 135
Query: 133 SWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ G + RP+ + F C NV + ++ LR+PA W +C N ++
Sbjct: 136 DYIQRGIYEDPLKLGRPNETNRPQNIYFRECENVTIKDITLRDPASWNQTYDQCKNLYVD 195
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIR 242
+ + + NNDGID+ D + V+ ID DDA+C K++ N+ + R
Sbjct: 196 GIHVDSK-SYWNNDGIDVVDCDGVVLKNSFIDAADDALCFKSHDANSMCQNVVVENCVGR 254
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ +S +K G+ S F+ NI I
Sbjct: 255 SSASGLKFGTVSRGGFRNFKVKNIKI 280
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I++V DFGAKG+G+ DT A + AI+ C N V P G Y + LKS++TL I
Sbjct: 2 IYNVCDFGAKGNGVDKDTEAFKKAIEVCEK-NGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L EDYP +RW ++ AE+A +V + G G +DGQ K+
Sbjct: 61 SGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAEDAENVAVVGFGTIDGQGEKW---- 116
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W RPR + F C NV + +++ W ++ + C N +
Sbjct: 117 ---------WRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVH 167
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
++ I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 168 NIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKERIPCENITITN 227
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 228 CIMAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|322435361|ref|YP_004217573.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321163088|gb|ADW68793.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 465
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 19/260 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+ V FGA GDGI DTAAIQ AID N ++ P G+ +LT + LKS+V ++
Sbjct: 34 YDVRTFGAIGDGIAVDTAAIQRAIDTAAQ-NGGGRILIPGGKRFLTGALVLKSNVNFHLA 92
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
+DA LL P DY + ++ ++ A + I+G G++DGQAM+F+ T ++
Sbjct: 93 DDAMLLANPDPADY---NGHLGLLNSDRARGLKISGTGMIDGQAMQFMTTFSQKDE---R 146
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
W + RPR+ C ++ + ++ W +H++ C+ + + I
Sbjct: 147 WEPK------KFRPRMFHLQRCMDLEITDITFGHSPEWGMHLLGCERVLVDGVRIRNFLE 200
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSWIRTKSSAI 248
PN DGID + + I I DDAI KT GP N+ D + ++ S +
Sbjct: 201 VPNCDGIDPDHCRDVEIRNCDIVCADDAIVIKTSDQAEDFGPSRNIVVKDCVVTSRDSGL 260
Query: 249 KLGSASWFDFKALVFDNITI 268
K+G+ ++ D ++F+ +
Sbjct: 261 KVGTETFSDISKILFERCKV 280
>gi|218259493|ref|ZP_03475216.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
gi|218225086|gb|EEC97736.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
Length = 494
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 4 LLLLSTTHIHIHSV-------IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVR--FPP 54
+LS T I + S+ DFG DG +T +IQ ID NK R F
Sbjct: 7 FFILSLTLICVASLSAKDYYATDFGVIADGKTLNTNSIQKGIDFV---NKLGGGRLVFTA 63
Query: 55 GEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGV 112
G YLT +I LKS+VTL++ E ATLLG DY ++S RW ++ A ++GITG G
Sbjct: 64 GNYLTGSIYLKSNVTLHLEEGATLLGSTNPWDYEKDSYIRWMSMIFAVKQQNIGITGKGT 123
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVR 164
++G+ + N MV + G + RP+ + F C NV + ++
Sbjct: 124 INGRGF-------QTANNMVDYIQRGIYEDPLKLGRPNETNRPQNIYFRECENVTIKDIT 176
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
LR+PA W +C N +I + + + NNDGID+ D + V+ +D DDA+C
Sbjct: 177 LRDPASWNQTYDQCKNLYIDGIHVDSK-SYWNNDGIDVVDCDGVVLKNSFLDAADDALCF 235
Query: 225 KTY--TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
K++ N+ + R+ +S +K G+ S F+ NI I
Sbjct: 236 KSHDANSMCQNVVVENCVGRSSASGLKFGTVSRGGFRNFKVKNIKI 281
>gi|154490365|ref|ZP_02030626.1| hypothetical protein PARMER_00598 [Parabacteroides merdae ATCC
43184]
gi|154088976|gb|EDN88020.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 480
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 21/266 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFG K DG +T++IQ ID ++ F G Y T TI LKS+VTL++ E
Sbjct: 11 YYATDFGVKADGKTLNTSSIQKGIDFVN-AQGGGRLVFTAGNYQTGTIYLKSNVTLHLEE 69
Query: 75 DATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
ATLLG DY ++ RW ++ A ++GITG G ++G+ + N MV
Sbjct: 70 GATLLGSTNPWDYEKDPYIRWMSMIFAVKQQNIGITGKGTINGRGF-------QTANNMV 122
Query: 133 SWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ G + RP+ + F C NV + ++ LR+PA W +C N ++
Sbjct: 123 DYIQRGIYEDPLKLGRPNETNRPQNIYFRECENVTIKDITLRDPASWNQTYDQCKNLYVD 182
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIR 242
+ + + NNDGID+ D + V+ ID DDA+C K++ N+ + R
Sbjct: 183 GIHVDSK-SYWNNDGIDVVDCDGVVLKNSFIDAADDALCFKSHDANSMCQNVVVENCVGR 241
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ +S +K G+ S F+ NI I
Sbjct: 242 SSASGLKFGTVSRGGFRNFKVKNIKI 267
>gi|325106327|ref|YP_004275981.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975175|gb|ADY54159.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 558
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 115/253 (45%), Gaps = 17/253 (6%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
LS+ I +V DFGAKGD DT A+Q+AID C K V P G ++ TIRLK
Sbjct: 48 LSSLGQKIFNVKDFGAKGDSTTLDTVAVQTAIDKCAEA-KEGIVLIPEGTFIIGTIRLKD 106
Query: 67 HVTLNIHEDATLLGGPRIEDY------PEESSRWYVVLAENATDVGITGGGVVDGQAMKF 120
+VTL++ L G P+ EDY P + ++ A NA +V ITG G +DG F
Sbjct: 107 YVTLHLSAGGVLKGSPKREDYTAGEGIPTGNGNIVMLYASNARNVSITGTGTIDGNGEAF 166
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
K + N TG D RP L+ F C + + + + AY C I++C+
Sbjct: 167 FTGKGD----NTGPNSTGGGYFD--RPHLLIFYKCNQLRLEDTFYTKSAYHCFRILQCEQ 220
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSW 240
I + IY N NNDG +T + DDA G +T ++S
Sbjct: 221 VDINGVVIYNRVNR-NNDGFHFNSCKYVHVTNCDVRCQDDACA---LFGSNQFVTISNSS 276
Query: 241 IRTKSSAIKLGSA 253
T+ S + GS
Sbjct: 277 FSTRWSIFRFGSG 289
>gi|427385208|ref|ZP_18881713.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
gi|425727376|gb|EKU90236.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
Length = 469
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 23/270 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPG-EYLTATIRLKSHVTLN 71
+I++++D+GAKGDG D AAIQ+AI+ C V P G ++ + L S V L+
Sbjct: 27 NIYNIMDYGAKGDGKTDDAAAIQTAIEVCSKSGGG-TVLVPAGYTFMCSPFALASFVNLH 85
Query: 72 IHEDATLLGGP--------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVT 123
+ ++ L+ P D E W + ++ V ITG GV+DG + F+
Sbjct: 86 LEPNSCLIANPDEAAYTLSAFRDNRGEGMMW--IYGKDLKQVSITGTGVIDGNGVAFMG- 142
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
K + S+ D RP ++ + + +V +R AYW +H++ C++ I
Sbjct: 143 ----KELEDSYELKPVTDFDP-RPHVLTLINIEKTVIRDVTIRNSAYWTVHLIGCNDASI 197
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATD 238
+SI D N DGID++ S N I I++GDD IC K G ++ T+
Sbjct: 198 DGISILNDLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYGSCEDVVVTN 257
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 258 CTMVSRSCAIKIGSENMDKINNVLFNNCII 287
>gi|325299494|ref|YP_004259411.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319047|gb|ADY36938.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 471
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 23/282 (8%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLT 59
+ LL T ++++++D+GA GDG D A+Q AIDAC V P G +L
Sbjct: 17 ICLLGSCQTKQTNVYNILDYGATGDGTTDDAPALQRAIDACSKAGGG-TVLVPAGHTFLC 75
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYPE--------ESSRWYVVLAENATDVGITGGG 111
+ RL S+V L++ ++ LL P Y E E W + + +V ITG G
Sbjct: 76 SPFRLASYVDLHLEPNSCLLANPDESVYTESAFGENRGEGMMW--ISGKGLKNVSITGTG 133
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DG + F+ K + S+ D RP ++ + + +V +R AYW
Sbjct: 134 TIDGNGVAFMG-----KELEDSYELKPVTDFDP-RPHVLTLTDVEKLVIRDVTIRNSAYW 187
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--- 228
+H++ C + I ++I + N DGID++ S + I I++GDD IC K
Sbjct: 188 TVHLIGCRDASIDGINILNNLKIRNGDGIDVDHSKDVRIANCFIESGDDCICLKNRREFE 247
Query: 229 --GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP ++ ++ + ++S AIK+GS + + ++F N I
Sbjct: 248 QYGPCEDVVVSNCTMTSRSCAIKIGSENMDSIRRVLFTNCII 289
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ +V D+G DG DTAAIQ+A+D C +V PPG Y +A +R+ T
Sbjct: 3 LEQRNVRDYGIDDDG-SLDTAAIQAALDDC--AGTGGEVYLPPGTYRSAPLRVGDDTTFR 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM---- 118
+ A L ++P SRW + +A +V ITG GV+DG
Sbjct: 60 LANGAELRFVQDFTEFPTVESRWEGWNQDGFHPCLHVADAANVTITGEGVIDGGGSYWWE 119
Query: 119 -------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
++ E + S N A S RP L+ GC NV V V LR +W
Sbjct: 120 FVSVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFW 179
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-- 229
H+V D+ I D+SI + PN DGIDI+ S ++ ID GDDAIC K+
Sbjct: 180 NTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEE 239
Query: 230 ------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ T+ + + +GS + D + + N T
Sbjct: 240 GREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 284
>gi|198277537|ref|ZP_03210068.1| hypothetical protein BACPLE_03759 [Bacteroides plebeius DSM 17135]
gi|198270035|gb|EDY94305.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 466
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 31/288 (10%)
Query: 3 LLLLLS--------TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPP 54
LL LLS + I++++D+GA GDG D AIQ AI+AC V P
Sbjct: 7 LLALLSIFFLGACHSQQTGIYNIMDYGATGDGKTDDALAIQKAINACSEAGGG-TVIVPS 65
Query: 55 GE-YLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE--------ESSRWYVVLAENATDV 105
G +L +L SH+ L++ ++ LL P Y E E W + ++ +V
Sbjct: 66 GRTFLCGPFKLASHIELHLAPNSRLLANPDESIYTESAFGANRGEGMMW--ISGKDLKNV 123
Query: 106 GITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRL 165
ITG G +DG + F+ K + S+ D RP L+ + + + ++ +
Sbjct: 124 SITGTGTLDGNGVAFMG-----KELEDSYELKPVTDFDP-RPHLLTLTNVQKLVIRDISV 177
Query: 166 REPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
R AYW +H++ C N I ++I D N DGIDI+ S + I+ I++GDD IC K
Sbjct: 178 RNSAYWSVHLIGCRNAMIDGITILNDLKIRNGDGIDIDHSKDVRISNCFIESGDDCICLK 237
Query: 226 TYT-----GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
G ++ T+ + ++S A+K+GS + ++F N I
Sbjct: 238 NRREFEQYGSCEDVVVTNCTMTSRSCAVKIGSENMDKINNVLFTNCII 285
>gi|15890426|ref|NP_356098.1| polygalacturonase [Agrobacterium fabrum str. C58]
gi|15158652|gb|AAK88883.1| polygalacturonase [Agrobacterium fabrum str. C58]
Length = 453
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL--------GGP 82
TAAIQ AIDA +V G +++A + LKS V L++ EDA L
Sbjct: 20 TAAIQQAIDAVSSAGGG-RVSLSAGRHVSAGLHLKSGVELHLAEDAVLAPVSDYDAYALT 78
Query: 83 RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
R+ E+S R +++A A+++ +TG G ++ F++ + V
Sbjct: 79 RVSVIAEDSDRG-MIIANGASNIAVTGPGRIEAGGENFIIGDDAAMGTYVPAKK------ 131
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
RPR++ CRNV + N+ + W LH+V C++ R++ I D PN DGI +
Sbjct: 132 ---RPRVMVLEACRNVRLENLNVSASPMWTLHMVNCEDLHFRNLRIENDRRLPNTDGIVL 188
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ +I I T DD IC KT GP ++T + + S A+KLG+ S+
Sbjct: 189 DACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCADITVRGCTVSSMSCALKLGTESF 248
Query: 256 FDFKALVFDNITI 268
DF +VF++ +
Sbjct: 249 GDFTNVVFEDCKV 261
>gi|4996612|dbj|BAA78557.1| polygalacturonase [Prevotella ruminicola]
Length = 494
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 27/275 (9%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
L +++ H ++ +GAK D T A+Q AIDAC +V P G Y TI+L
Sbjct: 38 LCIASMHAADFNIKSYGAKNDTTVLSTHALQQAIDACSDAGGG-RVVVPAGIYKIGTIQL 96
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPEESSRWY----------VVLAENATDVGITGGGVVD 114
KSHV L + + ATL G R+EDY S + ++ A+ DV I G G +D
Sbjct: 97 KSHVHLYLEQGATLYGSTRLEDYIPMKSDYLSLRTQTTTIQLIYADGVQDVSIDGLGTID 156
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
G+ F +SWN G RP L+ F+ +++ V + LR W H
Sbjct: 157 GRGRAF---------KKLSWNDEGI-----TRPHLIPFIQSQDILVRGITLRNSGCWMQH 202
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL-YN 233
+ CD I + ++ + N NND +DI+ + ++ + D+ DD I K+ + L N
Sbjct: 203 YLACDRLNIDGIKVF-NRNNYNNDALDIDGCHEVIVRGMIADSDDDGITLKSTSPRLCEN 261
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ +D + + +A+KLG+ + F+ + I +
Sbjct: 262 VRISDCVVSSHCNAVKLGTETNGGFRNINISGIVV 296
>gi|423342237|ref|ZP_17319951.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
gi|409218151|gb|EKN11123.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
Length = 498
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 129/268 (48%), Gaps = 25/268 (9%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVR--FPPGEYLTATIRLKSHVTLNI 72
+ DFG DG +T +IQ ID NK R F G YLT +I LKS+VTL++
Sbjct: 29 YYATDFGVIADGKTLNTNSIQKGIDFV---NKLGGGRLVFTAGNYLTGSIYLKSNVTLHL 85
Query: 73 HEDATLLGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
E ATLLG DY ++S RW ++ A ++GITG G ++G+ + N
Sbjct: 86 EEGATLLGSTNPWDYEKDSYIRWMSMIFAVKQQNIGITGKGTINGRGF-------QTANN 138
Query: 131 MVSWNHTGACS--------GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
MV + G + RP+ + F C NV + ++ LR+PA W +C N +
Sbjct: 139 MVDYIQRGIYEDPLKLGRPNETNRPQNIYFRECENVTIKDITLRDPASWNQTYDQCKNLY 198
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSW 240
I + + + NNDGID+ D + V+ +D DDA+C K++ N+ +
Sbjct: 199 IDGIHVDSK-SYWNNDGIDVVDCDGVVLKNSFLDAADDALCFKSHDANSMCQNVVVENCV 257
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
R+ +S +K G+ S F+ NI I
Sbjct: 258 GRSSASGLKFGTVSRGGFRNFKVKNIKI 285
>gi|340619596|ref|YP_004738049.1| polygalacturonase [Zobellia galactanivorans]
gi|339734393|emb|CAZ97770.1| Polygalacturonase, family GH28 [Zobellia galactanivorans]
Length = 467
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 32/266 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIHE 74
+V+D+GAK DG+ DT A+Q AIDAC N +V P G+ +T TI LK VTL+I
Sbjct: 25 NVLDYGAKADGVTVDTRAVQDAIDACTK-NGGGRVLIPAGKTVVTGTIYLKDFVTLHIEN 83
Query: 75 DATLLGGPRIEDYPEESSRWY----------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
ATLLG P DY ++ + ++ A++A + I G G +DG + K
Sbjct: 84 GATLLGSPNYRDYATDTHKNMYKNEPHMDRCLIFAKDARSIAIEGYGTIDGNGHQKNFNK 143
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ RP ++ F+ +++++ N+ L PA W + CDN +
Sbjct: 144 KK-----------------GGRPMMIRFVNVKDIHLNNITLINPAAWTSAWLYCDNISVS 186
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--GPLYNLTATDSWIR 242
++I N N DG+D + N +T D DD+IC + P N+T ++
Sbjct: 187 GITIISRVNN-NGDGLDFDGCTNVRVTNSNFDNSDDSICLQASRPDKPCKNITVSNCHFS 245
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
TK +++G S + +++ N T
Sbjct: 246 TKWGGMRIGLLSRGNIESVTVTNCTF 271
>gi|375254270|ref|YP_005013437.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
gi|363408292|gb|AEW21978.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
Length = 493
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 128/254 (50%), Gaps = 21/254 (8%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + DG +T +IQ AID ++ F G YLT TI LKS+VTL++ E A LL
Sbjct: 29 FGIRSDGATLNTRSIQKAIDHIHDKGG-GRLVFSVGRYLTGTIYLKSNVTLHLKEGAVLL 87
Query: 80 GGPRIEDYP-EESSRW-YVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHT 137
G DY E+ W +V+A +GITG GV+DG+ E+ N ++S +
Sbjct: 88 GSTNPLDYDIGENWNWTALVVAHEQHHIGITGQGVIDGRGY-------EVANNLISLINN 140
Query: 138 GACSG--------DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
G + RP+ + F CR++++ + L++PA W +C N + +++
Sbjct: 141 GIFEDALLLDRPREFRRPQNIYFKRCRDIHIQGILLKDPASWNQQYEQCRNMLVEEITTD 200
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--PLYNLTATDSWIRTKSSA 247
NNDGIDI D ++ +I D DD IC K+++ N+ ++ +RT +S
Sbjct: 201 SKAYW-NNDGIDIVDCDSVIIRNSYFDAADDGICLKSHSADHECSNIYIYNNTVRTSASG 259
Query: 248 IKLGSASWFDFKAL 261
IK G+ S F+ +
Sbjct: 260 IKFGTVSAGGFRNI 273
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I++V +FGAKG+G+ DT A + AI+ C N V P G Y + LKS++TL I
Sbjct: 2 IYNVCNFGAKGNGVDKDTEAFKKAIEVCEK-NGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L EDYP +RW ++ AE+A +V + G G +DGQ K+
Sbjct: 61 SGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAEDAENVAVVGFGTIDGQGEKW---- 116
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W RPR + F C NV + +++ W ++ + C N +
Sbjct: 117 ---------WRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVH 167
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
++ I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 168 NIKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKERIPCENITITN 227
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 228 CIMAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++SV +GA GDG D AAIQSAIDAC V Y +++I LKS+V L++
Sbjct: 2 VYSVTKYGAVGDGATNDAAAIQSAIDACNAAGGGRVVLEGGHTYYSSSIELKSNVELHLE 61
Query: 74 EDATL---------------------LGGPRIEDYPEESSRWYVVLAENATDVGITGGGV 112
+ A L + G + D P + + A++A + ITG G
Sbjct: 62 QGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDADNFSITGQGA 121
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNVWNVRLREPAYW 171
VDG F+ + +GD RP +V C +++ +V L+ +W
Sbjct: 122 VDGNVYAFMKRASRYY-----------FNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFW 170
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--- 228
LH C++ I ++ + + N+DGID + S N I + DD IC KT
Sbjct: 171 TLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNN 230
Query: 229 --GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP N+ ++ + + S+AIK+G+ DF+ ++ DN I
Sbjct: 231 EYGPTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCII 272
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++SV +GA GDG D AAIQSAIDAC V Y +++I LKS+V L++
Sbjct: 2 VYSVTKYGAVGDGATNDAAAIQSAIDACNAAGGGRVVLEGGHTYYSSSIELKSNVELHLE 61
Query: 74 EDATL---------------------LGGPRIEDYPEESSRWYVVLAENATDVGITGGGV 112
+ A L + G + D P + + A++A + ITG G
Sbjct: 62 QGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDADNFSITGQGA 121
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNVWNVRLREPAYW 171
VDG F+ + +GD RP +V C +++ +V L+ +W
Sbjct: 122 VDGNVYAFMKRASRYY-----------FNGDFYPRPTMVYVEHCNHISFHDVTLQNSPFW 170
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--- 228
LH C++ I ++ + + N+DGID + S N I + DD IC KT
Sbjct: 171 TLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNN 230
Query: 229 --GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP N+ ++ + + S+AIK+G+ DF+ ++ DN I
Sbjct: 231 EYGPTKNVIISNCTLTSTSAAIKIGTEGVADFENILVDNCII 272
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
+FGAKGDG+ DT AIQ A+DA K V PG Y +I +KS L++ + TL
Sbjct: 24 NFGAKGDGVADDTKAIQKALDAA--AGKHDTVTLKPGTYRIGSIFVKSGSRLDLPKGVTL 81
Query: 79 LGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKFVVTKNEIKN 129
G ++ YP +R W L TDV ITG G +DG + + +++
Sbjct: 82 RGIQSLDAYPLMPTRIAGIEMTWPAALVNVYKQTDVQITGEGTIDGDGSYWWKSYWDLRA 141
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
A D RPRL+ NV + L +W +HI + I ++I
Sbjct: 142 KYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFWTVHICYSHDVTIDHVTIR 201
Query: 190 GD--FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDS 239
+ P+ DGIDI+ S++ ++ ID DDA+C K P YN+ DS
Sbjct: 202 NNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRDSDGLRVNRPTYNVVLRDS 261
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNIT 267
IRT ++A+ GS + F+ + N+T
Sbjct: 262 LIRTGAAAVTFGSETSGGFRNIEAYNLT 289
>gi|333380566|ref|ZP_08472257.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826561|gb|EGJ99390.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
Length = 505
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 123/284 (43%), Gaps = 31/284 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I++V DFGA DG T IQ AID C V P G YL TI LKS V
Sbjct: 22 IYNVKDFGALNDGKTLTTIYIQKAIDQCSYEGGGV-VYVPKGNYLVGTINLKSDVEFRFE 80
Query: 74 EDATLLGGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKF------------ 120
ATL+ + Y ++++ V ENA +V ITG G + GQ M+F
Sbjct: 81 TGATLVATTDLSQYQKDNNGLAGVFYTENAKNVSITGNGKIFGQGMEFMYADSAKVISGD 140
Query: 121 ----VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
V KN+ + V D + ++ F C NV + + + YW IV
Sbjct: 141 VLNYVRQKNDFRKVSAGLGDGPVYPKDRFQQMII-FSNCYNVTLSDFECVDAPYWTFLIV 199
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-------- 228
CD + +SI + PN+DG+DI S+N ++ I GDDAI Y
Sbjct: 200 HCDRVKVSGLSINNNLLIPNSDGLDIISSSNVNVSDCIITCGDDAIVLAGYAHHFGDPGF 259
Query: 229 ----GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ ++ ++++SS I++G F+NITI
Sbjct: 260 KDIRKPSKNINISNCVLQSRSSGIRIGGWDQNHMSNYNFNNITI 303
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++++ FGA GDG +T+AI+ A++AC G + P G ++T I +KS++ L++
Sbjct: 8 VYNIEQFGAVGDGWANNTSAIKRAVEACSQGGGG-TIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTK 124
+ LL DYP SSRW + A +A ++ ITG G ++GQ +
Sbjct: 67 AGSELLFSNDRADYPVISSRWEGASRDVYMSCIYACHAENIAITGFGTLNGQGAYW---- 122
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W S RP LV F C V++ V++ + W +H CDN I
Sbjct: 123 ---------WKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTIS 173
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
+SI N+PN DGI+ E N I+ ID GDD I K T P N+T T+
Sbjct: 174 GVSIVNPANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAIPCENITITN 233
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + GS D + +V N
Sbjct: 234 CTMLHGHGGVVFGSEMSGDIRNVVVSN 260
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG DT AIQ AID C K V+ G +L+ I LKS++TL+I E ATLL
Sbjct: 30 FGAKGDGTTKDTVAIQKAIDTCAGYKKGGVVKLSGGIFLSGPISLKSNITLDIAEGATLL 89
Query: 80 GGPRIEDYPE-----ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
G P EDYP+ + + +V + NA ++ ITGGG +DG + + +K
Sbjct: 90 GSPDREDYPKVTFARQPTVQPLVGSVNAENITITGGGTIDGNGHIWWEYVHAVK------ 143
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
G D RP + F +++ V + ++ +W + D+ R++ I ++
Sbjct: 144 -EAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDLVFRNLKILAP-HS 201
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-------GPLYNLTATD 238
PN D ID S+N VI V GDD + K+ P N+T TD
Sbjct: 202 PNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGAINSPGPDAPSKNITITD 252
>gi|424908986|ref|ZP_18332363.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845017|gb|EJA97539.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 450
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP-- 88
TA IQ AIDA +V G +++A + LKS V L++ EDA L E Y
Sbjct: 17 TATIQQAIDAVSSAGGG-RVSLSAGRHVSAGLDLKSGVELHLAEDAVLAPVSDYEAYALT 75
Query: 89 -----EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A A+++ +TG G ++ F++ + +
Sbjct: 76 GVSVIAEDSDRGMIIARGASNIAVTGPGRIEAGGENFIIGDDTAMGTYIPAKK------- 128
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RPR++ CRNV + N+ + W LH+V C++ R++ I D PN DGI ++
Sbjct: 129 --RPRVMVLEACRNVRLENLHVSGSPMWTLHMVNCEDLHFRNLRIENDRRLPNTDGIVLD 186
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP N+ + + S A+KLG+ S+
Sbjct: 187 ACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCANIAVRRCTVSSMSCALKLGTESFG 246
Query: 257 DFKALVFDNITI 268
DF +VF++ +
Sbjct: 247 DFTNVVFEDCKV 258
>gi|378763434|ref|YP_005192050.1| putative polygalacturonase [Sinorhizobium fredii HH103]
gi|365183062|emb|CCE99911.1| putative polygalacturonase [Sinorhizobium fredii HH103]
Length = 444
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE- 89
TA IQSAIDA +V GE++ + LKS V L++ E A L P E Y +
Sbjct: 17 TAEIQSAIDAAS-ARGGGRVSLLAGEHVAGGLLLKSGVELHLAEGALLRPIPDYEAYRDT 75
Query: 90 ------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A NA +V ITG G ++ F+ + V
Sbjct: 76 TVGVIAEKSNRGMIVARNADNVRITGPGRIEAGGEHFIAGDDPTVGTFVP---------S 126
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
E RPR+V F GCR V + ++ W LH+ C++ IR+++I D PN DG+ ++
Sbjct: 127 EFRPRVVVFEGCRTVALDGFQVTGSPMWTLHLADCEDIVIRNVTITNDRRLPNTDGMVLD 186
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP ++T + + S A+KLG+ S
Sbjct: 187 ACRRVLIEDCAISTADDGICLKTSAGPDGKAIGVCESITVRRCTVSSLSCALKLGTESHG 246
Query: 257 DFKALVFDNITI 268
DF +VF++ +
Sbjct: 247 DFDNVVFEDCKV 258
>gi|335038144|ref|ZP_08531435.1| polygalacturonase [Agrobacterium sp. ATCC 31749]
gi|333790401|gb|EGL61807.1| polygalacturonase [Agrobacterium sp. ATCC 31749]
Length = 453
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 26/253 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL--------GGP 82
TAAIQ AID +V G +++A + LKS V L++ EDA L
Sbjct: 20 TAAIQQAIDTVSSAGGG-RVSLSAGRHVSAGLHLKSGVELHLAEDAVLAPVSDYDAYALT 78
Query: 83 RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
R+ E+S R +++A A+++ +TG G ++ F++ + V
Sbjct: 79 RVSVIAEDSDRG-MIIANGASNIAVTGPGRIEAGGENFIIGDDAAMGTYVPAKK------ 131
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
RPR++ CRNV + N+ + W LH+V C++ R++ I D PN DGI +
Sbjct: 132 ---RPRVMVLEACRNVRLENLNVSGSPMWTLHMVNCEDLHFRNLRIENDRRLPNTDGIVL 188
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ +I I T DD IC KT GP ++T + + S A+KLG+ S+
Sbjct: 189 DACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCADITVRGCTVSSMSCALKLGTESF 248
Query: 256 FDFKALVFDNITI 268
DF +VF++ +
Sbjct: 249 GDFTNVVFEDCKV 261
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 114/240 (47%), Gaps = 35/240 (14%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DF A+GDGI +TAA ++AIDAC Q+R P G YLT I+L S++ LN+ A L
Sbjct: 59 DFDARGDGIFDNTAAFKAAIDACRKAGG-GQIRVPDGHYLTGAIQLHSNIELNVSAGARL 117
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------------ 117
+ DYP +R+ ++ A +A +V ITG GV+DGQA
Sbjct: 118 IFSTDPMDYPVVLTRYEGVEVMNYSPLIYARDAKNVAITGEGVLDGQASNEHWWPWCGAE 177
Query: 118 ----MKFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ V + + + +G G RP V F C NV V ++ L+
Sbjct: 178 RFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCENVLVEDIHLK 237
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ +W +H V N +R + + G + PNNDG + E ++ +I DTGDD I K+
Sbjct: 238 DSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIENCYFDTGDDCIAIKS 295
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 118/267 (44%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I +V +FGAKG+GI DT A + AI+ C + P G Y I LKS++TL I
Sbjct: 2 IVNVREFGAKGNGIDKDTEAFKKAIEECEKQGGG-TIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L EDYP +RW ++ AENA +V + G G +DGQ K+
Sbjct: 61 SGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW---- 116
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W RPR + F C NV + +++ W ++ + C N +
Sbjct: 117 ---------WRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVH 167
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
++ I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 168 NVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITN 227
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 228 CIMAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGA G G DTAA+QSA+D C V P G+YLT + + SH TL + A
Sbjct: 10 VRDFGAVGTGDERDTAALQSALDEC--AGTGGTVVVPSGKYLTGPLTVGSHTTLELEAGA 67
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA----MKFVVT 123
TL E +P SRW +L A +V ITG G VDGQ + V
Sbjct: 68 TLSFVRDHEAFPARESRWEGWEQTGFHPCLLVAEAENVEITGRGTVDGQGDYWWQFYGVD 127
Query: 124 KNEIKNVMVSWNHTGACSGDEC--------RPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+E+ + + + D+ RP L NV+V + LR +W H+
Sbjct: 128 DDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRNSPFWNTHV 187
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------ 229
V DN + D+++ + PN DGIDI+ S I+ ++ GDDA+C K+
Sbjct: 188 VYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSGKDEEGRRI 247
Query: 230 --PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P +T T+ + + +GS D + + N T
Sbjct: 248 GRPASGITVTNCTVEAGHGGVVIGSEMSGDVRDVTVSNCTF 288
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 128/296 (43%), Gaps = 31/296 (10%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
+ L S + +V D+G + D DTAAIQ+A+D C + +V PPG Y +A
Sbjct: 29 MNALADASGVTLEQRNVRDYGIEDDD-SLDTAAIQAALDDC--AGEGGEVYLPPGTYRSA 85
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGG 111
+R+ T + A L ++P SRW + +A++V ITG G
Sbjct: 86 PLRVGDDTTFRLANGAELRFVQDFTEFPTVESRWEGWDQDGFHPCLHVADASNVTITGEG 145
Query: 112 VVDGQAM---KFVVTKNEIK--------NVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
++DG +FV E + S N S RP L+ GC NV V
Sbjct: 146 IIDGGGSYWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTV 205
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
V LR +W H+V D+ I D+SI + PN DGIDI+ S ++ ID GDD
Sbjct: 206 SGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDD 265
Query: 221 AICPKTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
AIC K+ P N+ T+ + + +GS + D + + N T
Sbjct: 266 AICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 321
>gi|255531611|ref|YP_003091983.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344595|gb|ACU03921.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 518
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 25/264 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++ +GA GDG +T AIQ AIDAC +V FP G +L+ TI LK ++T++ +
Sbjct: 29 NILKYGAIGDGTTLNTEAIQKAIDACYQSG-GGKVIFPEGRFLSGTIVLKDNITIHFERN 87
Query: 76 ATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A LLG ++DY W +++A +A ++G+ G G +DGQ +
Sbjct: 88 AVLLGSTDLKDYRNLDPFTEGLGIDVGWALLVAVDARNIGLEGEGTIDGQGSAI-----K 142
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+++ G G RP LV + C V V V L+ W H + N I ++
Sbjct: 143 EKHILTDTRPEGQRWG--LRPFLVRIVRCDGVTVNGVTLKYAGAWTSHYFQSKNLHIENV 200
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSS 246
I +NDGI I+ + VI + +GDDA+ KT + + S +R KSS
Sbjct: 201 KIM-SVGVAHNDGIGIDGCQDVVIKNCDVVSGDDALVFKTTSSKMACRNIEVSGLRLKSS 259
Query: 247 --AIKLGSASWFDFKALVFDNITI 268
IK+G+ S F+NI I
Sbjct: 260 QAGIKMGTESM-----AAFENIKI 278
>gi|408785015|ref|ZP_11196764.1| polygalacturonase [Rhizobium lupini HPC(L)]
gi|408489147|gb|EKJ97452.1| polygalacturonase [Rhizobium lupini HPC(L)]
Length = 453
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP-- 88
TA IQ AIDA +V G +++A ++LKS V L++ DA L E Y
Sbjct: 20 TATIQQAIDAASSAGGG-RVSLSAGRHVSAGLQLKSGVELHLAPDAVLAPVSDYEAYALT 78
Query: 89 -----EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A A+++ +TG G ++ F++ + +
Sbjct: 79 RVSVIAEDSDRGMIIARGASNIAVTGPGRIEAGGENFIIGDDTAMGTYIPAKK------- 131
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RPR++ CRNV + N+ + W LH+V C++ R++ I D PN DGI ++
Sbjct: 132 --RPRVMVLEACRNVRLENLHVSGSPMWTLHMVNCEDLHFRNLRIENDRRLPNTDGIVLD 189
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP N+ + + S A+KLG+ S+
Sbjct: 190 ACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCANIAVRRCTVSSMSCALKLGTESFG 249
Query: 257 DFKALVFDNITI 268
DF +VF++ +
Sbjct: 250 DFTNVVFEDCKV 261
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
D+G D DTAAIQ+A+D C + +V PPG Y +A +R+ TL + A L
Sbjct: 3 DYGTDDDD-SLDTAAIQAALDDC--AGEGGEVYLPPGTYRSAPLRVGDDTTLRLANGAEL 59
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM---KFV-VTKN 125
++P SRW + +A +V ITG GV+DG +FV V
Sbjct: 60 RFVQDFTEFPTVESRWEGWNQDGFHPCLHVADAANVTITGEGVIDGGGSYWWEFVSVPPE 119
Query: 126 EIKNVMV-------SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
E + S N A S RP L+ GC NV V V LR +W H+V
Sbjct: 120 EYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYS 179
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--------P 230
++ + D+SI + PN DGIDI+ S ++ ID GDDAIC K+ P
Sbjct: 180 EDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRP 239
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+ T+ + + +GS + D + + N T
Sbjct: 240 TENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 277
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +FGAKG+GI DT A + AI+ C + P G Y I LKS++TL I
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKAIEECEKQGGG-TIFVPAGIYHIGAIHLKSNMTLYIESG 62
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L EDYP +RW ++ AENA +V + G G +DGQ K+
Sbjct: 63 AVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW------ 116
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
W RPR + F C NV + +++ W ++ + C N + ++
Sbjct: 117 -------WRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNV 169
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSW 240
I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 170 KIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCI 229
Query: 241 IRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 230 MAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|294674947|ref|YP_003575563.1| polygalacturonase/beta-xylosidase [Prevotella ruminicola 23]
gi|294474354|gb|ADE83743.1| putative polygalacturonase/beta-xylosidase [Prevotella ruminicola
23]
Length = 936
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 27/275 (9%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
L +++ H ++ +GA+ D T A+Q AIDAC +V P G Y TI+L
Sbjct: 11 LCIASMHAADFNIKSYGAQNDTTVLSTHALQQAIDACSAAGG-GRVVVPAGIYKIGTIQL 69
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPEESSRWY----------VVLAENATDVGITGGGVVD 114
KSHV L + + ATL G R+EDY S + ++ A+ DV I G G +D
Sbjct: 70 KSHVHLYLEQGATLYGSTRLEDYIPMKSDYLSLRTQTTTIQLIYADGVQDVSIDGFGTID 129
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
G+ F +SWN G RP L+ F+ +++ V + LR W H
Sbjct: 130 GRGRAF---------KKLSWNDEGI-----TRPHLIRFIQSQDILVRGITLRNSGCWMQH 175
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL-YN 233
+ CD I + ++ + N NND +DI+ + ++ + D+ DD I K+ + L N
Sbjct: 176 YLACDRLNIDGIKVF-NRNNYNNDALDIDGCHEVIVRGMIADSDDDGITLKSTSPRLCEN 234
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ +D + + +A+KLG+ + F+ + I +
Sbjct: 235 VRISDCVVSSHCNAVKLGTETNGGFRNINISGIVV 269
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 39/300 (13%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
+ L S + +V D+G + D DTAAIQ+A+D C + +V PPG Y +A
Sbjct: 29 MNALADASGVTLEQRNVRDYGIEDDD-SLDTAAIQAALDDC--AGEGGEVYLPPGTYRSA 85
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGG 111
+R+ T + A L ++P SRW + +A++V ITG G
Sbjct: 86 PLRVGDDTTFRLANGAELRFVQDFTEFPTVESRWEGWDQDGFHPCLHVADASNVTITGEG 145
Query: 112 VVDGQAM---------------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCR 156
V+DG + EI+ S N S RP L+ GC
Sbjct: 146 VIDGGGSYWWVFVSLPPEQYPSELAARLEEIR----SGNQQDEVSTFTVRPPLLQIDGCE 201
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
NV V V LR +W H+V D+ I D+SI + PN DGIDI+ S ++ ID
Sbjct: 202 NVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHID 261
Query: 217 TGDDAICPKTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GDDAIC K+ P N+ T+ + + +GS + D + + N T
Sbjct: 262 AGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 321
>gi|116623081|ref|YP_825237.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226243|gb|ABJ84952.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 473
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 21/273 (7%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTAT 61
LL I V D+GAKGDG+ DTAAIQ AID K QV G+ YL T
Sbjct: 30 LLARSGRAQTKIFDVRDYGAKGDGVTLDTAAIQRAIDEAAAEGKGAQVLVRGGKKYLIGT 89
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV 121
+ LK + ++ +DA L+ + P + V+ A A + ITG G ++G+A +F
Sbjct: 90 LELKGAIDFHLADDAELV----VTADPAQYRGAAVIAATGAEGLRITGTGNINGRAREF- 144
Query: 122 VTKNEIKNVMVSWNHTGAC-SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
M ++ G RP++ C+ + V + E W LH+V C++
Sbjct: 145 ---------MTGYDQPGEWWLPKTFRPKMFVLTACKGLEVHGISFSEAPEWGLHMVGCEH 195
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLT 235
+ + I + PN DGID + + I I GDDAI K+ G +
Sbjct: 196 VLVDGLRIRNLLDVPNCDGIDPDHCRDVEIKNCDIVCGDDAIVVKSTRQERDFGACSGIR 255
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
D I+T+ +K+G+ + + +VF+ I
Sbjct: 256 VHDCLIQTQDCGVKIGTETTQEIHDVVFERCEI 288
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ +V D+G D DTAAIQ+A+D C + +V PPG Y +A +R+ T
Sbjct: 3 LEQRNVRDYGIDDDD-SLDTAAIQAALDDC--AGEGGEVYLPPGTYRSAPLRVGDDTTFR 59
Query: 72 IHEDATLLGGPRIEDYPEESSRW------------YVVLAENATDVGITGGGVVDGQAM- 118
+ A L ++P SRW +V AEN T ITG GV+DG
Sbjct: 60 LANGAELRFVQDFTEFPTVESRWEGWDQDGFHPCLHVADAENVT---ITGEGVIDGGGSY 116
Query: 119 ----------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
++ E + N S RP L+ GC NV V V LR
Sbjct: 117 WWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNS 176
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT 228
+W H+V D+ I D+SI + PN DGIDI+ S ++ ID GDDAIC K+
Sbjct: 177 PFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGK 236
Query: 229 G--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ T+ + + +GS + D + + N T
Sbjct: 237 DEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 284
>gi|418298163|ref|ZP_12910002.1| polygalacturonase [Agrobacterium tumefaciens CCNWGS0286]
gi|355536758|gb|EHH06025.1| polygalacturonase [Agrobacterium tumefaciens CCNWGS0286]
Length = 450
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE- 89
T AIQ AID +V G +++ + LKS V L++ EDA L E Y +
Sbjct: 17 TTAIQQAIDTVSAAGGG-RVSLAAGRHVSGGLVLKSGVELHLAEDAVLAPVSDYEAYADT 75
Query: 90 ------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A A D+ +TG G ++ F++ ++ V
Sbjct: 76 TVSVIAEDSNRGMLIASGAHDIAVTGPGRIEAGGENFIIGDDKAMGTYVPAKK------- 128
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RPR++ C NV + N+ + W LH+V C++ R++ I D PN DGI ++
Sbjct: 129 --RPRVMVLEACHNVRLENLHVSASPMWTLHMVDCEDLHFRNLRIENDRRLPNTDGIVLD 186
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP ++T + + S A+KLG+ S+
Sbjct: 187 ACRRALIEDCFISTADDGICLKTSAGPDGKAVGVCADITVRRCTVSSMSCALKLGTESFG 246
Query: 257 DFKALVFDNITI 268
DF +VF++ +I
Sbjct: 247 DFTNVVFEDCSI 258
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 59/307 (19%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT 61
+ + ++++ I +V D+GA GDG+ D+ AIQ AIDAC PG V P G Y TA
Sbjct: 132 KQISVITSNEGKIFNVKDYGAVGDGVTKDSKAIQDAIDACTPG---GVVVIPAGTYYTAP 188
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGV 112
++LKS +TLNI + AT+L + DY SRW ++ A +A ++ I G G
Sbjct: 189 LKLKSDMTLNIEKGATILASRDVSDYKIIDSRWEGTSFKSYMSIITAIDAKNLNIIGEGT 248
Query: 113 VDGQA---MKFVVTKNE------IKNVMVSWNH---TGACSGDE---------------- 144
+DG A + + E + V VS + G +GD+
Sbjct: 249 IDGNAGPIKEAAAGETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPK 308
Query: 145 --------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY---GDFN 193
RPR + + C V + V+++ W +H + N I D+++ +
Sbjct: 309 ATDPTKQTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVD 368
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--------PLYNLTATDSWIRTKS 245
+PN DG+D + +N ++ D GDD I K+ P N+T +S +
Sbjct: 369 SPNTDGLDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGH 428
Query: 246 SAIKLGS 252
+ LGS
Sbjct: 429 GGVTLGS 435
>gi|237711639|ref|ZP_04542120.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|229454334|gb|EEO60055.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
Length = 457
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+ +I FGAKGDG D AAIQ AI+AC V P G +L ++L S+V L++
Sbjct: 16 YDIIAFGAKGDGKTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLQLASYVNLHLE 74
Query: 74 EDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
++ LL P Y E + R W + ++ + ITG G +DG + F+
Sbjct: 75 PNSRLLANPDESIYTESAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNGIAFMG--- 129
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K + S+ D RP ++ + + ++ +R AYW +H++ C + I
Sbjct: 130 --KELDDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTIHLIGCYDALIDG 186
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
+S+ + N DGID++ S I I++GDD IC K G ++ T+
Sbjct: 187 ISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCEDIVVTNCV 246
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + + ++F+N I
Sbjct: 247 MTSRSCAIKIGSENMDKIENVLFNNCII 274
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 23/266 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DF DG DTA Q A+D + PPG Y T+ L SH+ L++
Sbjct: 4 SLADFHPVADGETLDTACFQRALDHLTQRGGGT-LTVPPGRYRLGTLTLGSHLKLHLAAG 62
Query: 76 ATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
ATLL R+EDY E S+ ++ A ++ I+G GV+DG + + + +
Sbjct: 63 ATLLASQRVEDYQHCLAQSQAELSQHVLLYAVGQRNISISGKGVIDGDGEAWFAAEKDAQ 122
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
+ RPR++ F C V + + + W +H+V C + + ++I
Sbjct: 123 GYRLPRPQ---------RPRIIVFEDCEQVTLQEFTIVQAPMWTVHLVSCRHVHVEHLTI 173
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSWIR 242
PN D +DI+ ++ + DDAIC KT P + + ++ +R
Sbjct: 174 DNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPTHLRRAARQIMISNCQLR 233
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+ S A K+G+ ++ D + + TI
Sbjct: 234 SWSCAFKIGTETFDDVEDVTVSGCTI 259
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 124/285 (43%), Gaps = 31/285 (10%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ +V D+G D DTAAIQ+A+D C + +V PPG Y +A +R+ T
Sbjct: 3 LEQRNVRDYGIDDDD-SLDTAAIQAALDDC--AGEGGEVYLPPGTYRSAPLRVGDDTTFR 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM---K 119
+ A L ++P SRW + +A++V ITG GV+DG +
Sbjct: 60 LANGAELRFVQDFTEFPTVESRWEGWDQDGFHPCLHVADASNVTITGEGVIDGGGSYWWE 119
Query: 120 FVVTKNEIKNVMVS--------WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
FV E ++ N S RP L+ GC NV V V LR +W
Sbjct: 120 FVSLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFW 179
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-- 229
H+V D+ I D+SI + PN DGIDI+ S ++ ID GDDAIC K+
Sbjct: 180 NTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQ 239
Query: 230 ------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ T+ + + +GS + D + + N T
Sbjct: 240 GREVGRPTENVVVTNCTVEHGHGGVVIGSETAGDVRHVTVTNCTF 284
>gi|265753058|ref|ZP_06088627.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513915|ref|ZP_08793430.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423230932|ref|ZP_17217336.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|423244643|ref|ZP_17225718.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
gi|263236244|gb|EEZ21739.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345456135|gb|EEO45804.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392630052|gb|EIY24054.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|392641492|gb|EIY35268.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
Length = 470
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+ +I FGAKGDG D AAIQ AI+AC V P G +L ++L S+V L++
Sbjct: 29 YDIIAFGAKGDGKTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLQLASYVNLHLE 87
Query: 74 EDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
++ LL P Y E + R W + ++ + ITG G +DG + F+
Sbjct: 88 PNSRLLANPDESIYTESAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNGIAFMG--- 142
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K + S+ D RP ++ + + ++ +R AYW +H++ C + I
Sbjct: 143 --KELDDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTIHLIGCYDALIDG 199
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
+S+ + N DGID++ S I I++GDD IC K G ++ T+
Sbjct: 200 ISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCEDIVVTNCV 259
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 260 MTSRSCAIKIGSENMDKIDNVLFNNCII 287
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 41/253 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA G G +DTA++Q+AI +CPP + V P G YLTA + LKS++TL I +
Sbjct: 85 NVKDFGATGTGEKHDTASLQAAIMSCPPSGR---VLIPEGTYLTAPLYLKSNITLEIQKG 141
Query: 76 ATLLGGPRIEDYP---------EESSRWYV---------VLAENATDVG-----ITGGGV 112
A LLG EDYP + +Y+ A T +G I G G+
Sbjct: 142 AKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLTGIGVNNVKIIGKGI 201
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A F + K V+W RPRL+ CR++ + V ++ W
Sbjct: 202 IDGNA-SFDNWWKDAKKKRVAW-----------RPRLIFIKNCRDILIEEVTVQNSPSWT 249
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTG 229
+H + N + ++ + ++PN DGI+ E N I V GDD I K+ Y G
Sbjct: 250 IHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLG 309
Query: 230 PLYNLTATDSWIR 242
+ + D IR
Sbjct: 310 QRLKIASQDIMIR 322
>gi|294675242|ref|YP_003575858.1| polygalacturonase family protein [Prevotella ruminicola 23]
gi|294473577|gb|ADE82966.1| polygalacturonase family protein [Prevotella ruminicola 23]
Length = 440
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 27/287 (9%)
Query: 1 VQLLLL----LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE 56
+QL+LL +S ++ V GA G+GI D AIQ AID C +V P
Sbjct: 7 LQLILLWMIVMSAAAQSVYDVTAAGAIGNGIVDDAQAIQRAIDRCSAEGGG-RVLLPRNH 65
Query: 57 -YLTATIRLKSHVTLNIHEDATLLGGP-----RIEDYPEESSRWYVVL-AENATDVGITG 109
++ I+LKS+V L + A L P ++ + + + L AE+A ++ I G
Sbjct: 66 TFMAGPIQLKSNVELYLEATAILKANPDESIYKLSAFGQNRGEGMLWLWAEHAENISICG 125
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDEC---RPRLVGFLGCRNVNVWNVRLR 166
G + G + F+ + +S ++ D+ RP ++ +N+ + +V ++
Sbjct: 126 KGTIHGNGIAFMGAE-------LSDSYELKPLKDQTFDPRPHVLTLTDVKNLTIRDVTIK 178
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
E AYW +H++ CD I +++ + N DGIDI+ S + I I +GDD IC K
Sbjct: 179 EGAYWTVHLIGCDEAVIDGINLLNNLKIRNGDGIDIDHSKHVRIANCHITSGDDCICLKN 238
Query: 227 YT-----GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
G +++T T+ + ++S AIK+GS + +VFDN I
Sbjct: 239 RREFEQYGSCHDITVTNCVMSSRSCAIKIGSENMDSIYNVVFDNCII 285
>gi|393787227|ref|ZP_10375359.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
gi|392658462|gb|EIY52092.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
Length = 513
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 124/258 (48%), Gaps = 31/258 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++DFGAK + ++AAIQ+AID C V P G YLT TI LKS+V L +H
Sbjct: 23 SILDFGAKQNS-RDNSAAIQAAIDKCALSGGG-TVYVPAGTYLTTTIFLKSNVHLFLHNG 80
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
A L G + D P+ +V+ EN + I G G +DGQ N
Sbjct: 81 AVLQG---VTD-PKAYKGRAIVVGENVKNTSIQGEGCIDGQG-----------------N 119
Query: 136 HTGACSGDEC--RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
H GD+ RP +V F C NV V +V L A W L D + ++ IY N
Sbjct: 120 HKNFQFGDDKGRRPHVVLFENCSNVKVKDVFLYNSASWTLRCANNDGVIVNNIRIYSHGN 179
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYN---LTATDSWIRTKSSAIKL 250
N DGIDI +S N VI+ +D DD IC KT P ++ +T ++ I + + IK
Sbjct: 180 -HNCDGIDI-NSRNVVISDCIVDCDDDGICFKTDI-PGFDVEHVTVSNCVIASNCNGIKF 236
Query: 251 GSASWFDFKALVFDNITI 268
G+ S+ F+ + N I
Sbjct: 237 GTGSFGTFRNISISNCVI 254
>gi|150004707|ref|YP_001299451.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933131|gb|ABR39829.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 625
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T + I V +GA GDG +T AIQ AIDAC VR GEY+T TI LKS V
Sbjct: 53 TVPVSIFDVRKYGAIGDGSTLNTTAIQKAIDACFVAGGGT-VRIAGGEYVTGTIELKSGV 111
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVL------------AENATDVGITGGGVVDGQ 116
L + + A LLG ++DYP++ R+ V+ AE A VGI G G
Sbjct: 112 MLEVAKGARLLGSTNLKDYPDKVERFQSVMNVIHKYRISLIYAERAERVGICGEGE---- 167
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + E KN GA G RP + + C NV + + LR A W +
Sbjct: 168 ----IYFRGEAKN-FPGPETIGALEG---RPFGIRMIECNNVVLKGITLRNSAAWMQSYI 219
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLT 235
C + ++++ N NND +D + N ++ + DDA+C K+ + P N+
Sbjct: 220 YCRDLIFDGITVFNHANH-NNDALDPDGCKNVIVRNCFFSSHDDAMCLKSASAKPCENIL 278
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALV 262
+S + +A KLG+ + D++ ++
Sbjct: 279 IENSTFYSTCNAFKLGTDTQGDYRNII 305
>gi|294777707|ref|ZP_06743158.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448775|gb|EFG17324.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 470
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 24/276 (8%)
Query: 8 STTHI-HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLK 65
ST+H + + ++ +GAKGDG D AAIQ AI+AC V P G +L + LK
Sbjct: 21 STSHQGNTYDIMTYGAKGDGQTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLYLK 79
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQA 117
S+V L++ ++ LL P Y E + R W + ++ + ITG G +DG
Sbjct: 80 SYVNLHLEPNSRLLANPDESIYTESAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNG 137
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ F+ K + S+ D RP ++ + + ++ +R AYW +H++
Sbjct: 138 IAFMG-----KELDDSYELKPVTDFDP-RPHVLTLINAEKTVIRDITIRNSAYWTIHLIG 191
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLY 232
C + I +S+ + N DGID++ S I I++GDD IC K G
Sbjct: 192 CYDALIDGISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCE 251
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ T+ + ++S AIK+GS + ++F+N I
Sbjct: 252 DIVVTNCVMTSRSCAIKIGSENMDKIDNVLFNNCII 287
>gi|333380567|ref|ZP_08472258.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826562|gb|EGJ99391.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
Length = 504
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T++ I+++ID+GAK DG+ TA IQ AI+ C V P G YL TI LKS+V
Sbjct: 17 TSNAKIYNIIDYGAKNDGVTLTTAQIQEAINECHKEGGGI-VHVPSGTYLVGTINLKSNV 75
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWY-VVLAENATDVGITGGGVVDGQAMKFVV----- 122
N A L + Y + + E + +V ITG G + G+ M+F+
Sbjct: 76 EFNFETGAILKATTDLTQYQRHNRELAGIFYTEKSENVSITGNGRIFGRGMEFMYEGKAK 135
Query: 123 TKNEIKNVMVSW--NHTGACSGDECRP--------RLVGFLGCRNVNVWNVRLREPAYWC 172
T + + V N SG P ++V F C NV + + + YW
Sbjct: 136 TIGDDQKVFTRQKENFRKVFSGLGDGPLYPKDRFHQMVIFSECTNVTLSDFECIDAPYWT 195
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--- 229
+ IV CD I +SI + PN DGIDI +N ++ I GDDAI Y
Sbjct: 196 ILIVHCDRVKITGLSIDNNLLIPNGDGIDIISCSNVNMSNCIITCGDDAIVVAGYANHHG 255
Query: 230 ---------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ ++ ++++SS I++G FDNI I
Sbjct: 256 DPGFKDIMKPSKNVNVSNCVLQSRSSGIRIGGHDQNHMSNYNFDNIVI 303
>gi|212695340|ref|ZP_03303468.1| hypothetical protein BACDOR_04887 [Bacteroides dorei DSM 17855]
gi|212662069|gb|EEB22643.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 470
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+ +I FGAKGDG D AAIQ AI+AC V P G +L ++L S+V L++
Sbjct: 29 YDIIAFGAKGDGKTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLQLASYVNLHLE 87
Query: 74 EDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
++ LL P Y E + R W + ++ + ITG G +DG + F+
Sbjct: 88 PNSRLLANPDESIYTESAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNGIAFMG--- 142
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K + S+ D RP ++ + + ++ +R AYW +H++ C + I
Sbjct: 143 --KELDDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTVHLIGCYDALIDG 199
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
+S+ + N DGID++ S I I++GDD IC K G ++ T+
Sbjct: 200 ISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCEDIVVTNCV 259
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 260 MTSRSCAIKIGSENMDKIDNVLFNNCII 287
>gi|397689076|ref|YP_006526330.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395810568|gb|AFN73317.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 469
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPG-EYLTATIRLKSHVTLNIH 73
++V+ FGA GDG DT AIQ+AID +V P G ++LT TI LKS V I
Sbjct: 38 YNVLKFGAAGDGKTLDTKAIQNAIDKAHAEGGNAKVIIPEGYKFLTGTIVLKSGVEFFID 97
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
+ A L+ DY + V AE A + ++G G ++G+A F+ E +
Sbjct: 98 QGAELIISANQADYKNSA----VFYAEGAEGLTMSGFGNIEGRATDFMSHYEEENEWWIP 153
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
++ RP++ CRN+ + + W +H++ C+N + + + +
Sbjct: 154 ---------NKWRPKMFILKECRNMQLKDFSFSRAPEWGVHMLGCENVLVDGIRVRNYLD 204
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSWIRTKSSAI 248
PN DG+D + I I GDDAI K GP ++ D + T+ S +
Sbjct: 205 VPNCDGVDPDHCRKVEIKNCDIVCGDDAIVVKATKQDKDYGPSTDIRVYDCILETQDSGV 264
Query: 249 KLGSASWFDFKALVFDNITI 268
K+G+ + D K ++F+N I
Sbjct: 265 KIGTETTSDIKNVLFENCKI 284
>gi|319640290|ref|ZP_07995015.1| hypothetical protein HMPREF9011_00612 [Bacteroides sp. 3_1_40A]
gi|345517319|ref|ZP_08796796.1| glycoside hydrolase [Bacteroides sp. 4_3_47FAA]
gi|254834081|gb|EET14390.1| glycoside hydrolase [Bacteroides sp. 4_3_47FAA]
gi|317388065|gb|EFV68919.1| hypothetical protein HMPREF9011_00612 [Bacteroides sp. 3_1_40A]
Length = 470
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 24/276 (8%)
Query: 8 STTHI-HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLK 65
ST+H + + ++ +GAKGDG D AAIQ AI+AC V P G +L + LK
Sbjct: 21 STSHQGNTYDIMTYGAKGDGQTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLYLK 79
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQA 117
S+V L++ ++ LL P Y E + R W + ++ + ITG G +DG
Sbjct: 80 SYVNLHLEPNSRLLANPDESIYTESAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNG 137
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ F+ K + S+ D RP ++ + + ++ +R AYW +H++
Sbjct: 138 IAFMG-----KELDDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTIHLIG 191
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLY 232
C + I +S+ + N DGID++ S I I++GDD IC K G
Sbjct: 192 CYDALIDGISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCE 251
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ T+ + ++S AIK+GS + ++F+N I
Sbjct: 252 DIVVTNCIMTSRSCAIKIGSENMDKIDNVLFNNCII 287
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +FGAKGDGI D+ AIQ IDA V F G YL+ +I +KS VTL + +
Sbjct: 33 NVTNFGAKGDGITLDSPAIQRTIDAA--AKSGGTVVFRAGTYLSGSIFVKSGVTLRVDKG 90
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKF----VV 122
T+LG +I DYP +R W L + ITG G +DG F
Sbjct: 91 VTILGSQKISDYPLMPTRVAGIEMTWPAALVNIYEQKNAEITGEGTIDGDGKVFWDGYWS 150
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
+ + + W A D RPRL+ V + + LR +W +HI +
Sbjct: 151 LRKDYDTRGIRW----AADYDSKRPRLIQVFNSSQVKLSGLMLRRSGFWTVHICYSHDVT 206
Query: 183 IRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLY 232
+ ++I + P+ DGIDI+ S ++ I DDA+C K P
Sbjct: 207 LDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTE 266
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ DS IR ++ + +GS + F+ + +T+
Sbjct: 267 DIVLRDSVIRDGAAGVTIGSETSGGFRNIEAYGLTV 302
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 43/239 (17%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
++ +V DFGAKGDG+ DTAA+Q++I ACP + + P G YL I LKS++T+ +
Sbjct: 54 YVLNVKDFGAKGDGLELDTAAVQASIAACPLHGR---IIVPKGRYLLTPIFLKSNITIEL 110
Query: 73 HEDATLLGGPRIEDYP------EESSRWYVVLAE----------------NATDVGITGG 110
E A LLG YP + SS+ L N +V I G
Sbjct: 111 EEGAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVNIIGN 170
Query: 111 GVVDGQAMKFVVTKN---EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G++DG A N E K ++W RPR++ +GC+N+ V +V ++
Sbjct: 171 GIIDGNAS----IDNWWFEAKKKRIAW-----------RPRMIFLVGCKNILVESVTVKN 215
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H + ++ ++ I ++PN DG+D E N I V GDD I K+
Sbjct: 216 SPSWTIHPLMSEDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKS 274
>gi|440286926|ref|YP_007339691.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
gi|440046448|gb|AGB77506.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
Length = 445
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 114/266 (42%), Gaps = 23/266 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ G G TA +Q ID + PPG +LT T+ L SH TL++
Sbjct: 4 SLEQAGLDNTGTRPVTAQLQQMIDTLAAAGG-GTLTIPPGVWLTGTLVLPSHFTLHLEAG 62
Query: 76 ATLLGGPRIEDYP-------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
A L P + DYP E S ++ A N + ++G G V+G A + + + +
Sbjct: 63 ACLRASPNVADYPVDLTQSMAELSHMALLYARNQQQITLSGEGRVEGNAAAWFAPQADAQ 122
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
G RPRL+ GC V + ++ L + W H+V C + FI ++I
Sbjct: 123 ---------GYRQPAAQRPRLLVLEGCEQVRLCDITLADSPMWTAHLVSCKHIFIHRLTI 173
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------YTGPLYNLTATDSWIR 242
D N D +D++ I+ DD IC KT P ++ + IR
Sbjct: 174 DNDLALSNTDALDLDSCQFVHISDSYFSAADDGICLKTTRKAPALQQPTRHVVVNNCIIR 233
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+KS AIK+G+ + D ++ N TI
Sbjct: 234 SKSCAIKVGTETAADISHIIVSNCTI 259
>gi|255531482|ref|YP_003091854.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344466|gb|ACU03792.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 492
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 21/262 (8%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFG + DG ++ +IQ+AID + ++ F G Y++ TI LKS+VTL++ A++
Sbjct: 25 DFGIQSDGKTLNSRSIQAAIDYIST-HGGGRLVFSAGSYVSGTIYLKSNVTLHLESGASI 83
Query: 79 LGGPRIEDYPEESS-RWY-VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
LG DY ++ + W ++ + ++GITG G+++G+ F N + NV H
Sbjct: 84 LGSNNPFDYIKDPAVNWQSLIFSIKQENIGITGPGMINGRG--FTTAINALSNV-----H 136
Query: 137 TG----ACSGDEC----RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
G A D RP+ + F C+N+ + ++ L++PA W +C N + ++++
Sbjct: 137 RGIFKDALKYDRIQEGNRPQNIYFRECKNIVIKDITLKDPASWNQTYDQCQNLLVDNITV 196
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIRTKSS 246
+ NNDG+DI D + ++ D DDAIC K++ N+ + R+ ++
Sbjct: 197 DSK-SYWNNDGVDIVDCKDVIVRNSYFDVADDAICLKSHDVNALCENILVENCTARSSAN 255
Query: 247 AIKLGSASWFDFKALVFDNITI 268
+K G+AS F+ + N+TI
Sbjct: 256 GLKFGTASRGGFRNVTVKNLTI 277
>gi|294675387|ref|YP_003576003.1| endo-polygalacturonase [Prevotella ruminicola 23]
gi|294472104|gb|ADE81493.1| putative endo-polygalacturonase [Prevotella ruminicola 23]
Length = 480
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 19/255 (7%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR------- 83
T +Q AID + PG YLT + L+S +TL E A LLG
Sbjct: 42 TNQLQQAIDRLAKKGGGTLL-LAPGHYLTGGLMLRSGITLQFDEGAVLLGSTNPYHYQSM 100
Query: 84 -IEDYPEE---SSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI----KNVMVSWN 135
+ED ++ ++ +++A+ A V I G GV+DGQ ++ + + + + V +N
Sbjct: 101 AVEDTDDQRGDNASMALLMADGAEHVSICGKGVIDGQGLQLALNIDSLHHTGERVDAHYN 160
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
+ RP+L F C+N+ V +V L+ A W L C + + +++I +
Sbjct: 161 QRRQRPSELARPKLFFFYRCKNIEVNDVTLKSSANWGLSFDLCQHLKLTNLTIE-NRAYW 219
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWIRTKSSAIKLGSA 253
NNDGID D + ++ +I++ DD +C K+Y ++ IR+ +SAIK G+A
Sbjct: 220 NNDGIDFTDCQHVLVADCRINSADDGVCLKSYHTQSECRDIELARLDIRSSASAIKFGTA 279
Query: 254 SWFDFKALVFDNITI 268
SW F+ + +I +
Sbjct: 280 SWGGFRQVYIHDIKV 294
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DT+ Q A+D A G + PPG Y T+ L S++ L++
Sbjct: 4 SLADFYPVADGETLDTSCFQRALDHLAARGGGT---LSVPPGRYHLGTLSLGSNIHLHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
ATLL R+EDY + E S+ ++ A ++ ++G G +DG + T+ +
Sbjct: 61 AGATLLASARVEDYQQQLAQSQAELSQHVLLYAVGQRNITVSGKGTIDGNGEAWFATEKD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + + W +H+V C + I +
Sbjct: 121 QQGYRLPRAQ---------RPRMLVFEDCEQVTLEDFSILQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSW 240
+I + PN D +DI+ ++ + DDAIC KT P + + ++
Sbjct: 172 TIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTSQKPAHLRRAARQIMISNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ ++ D + + TI
Sbjct: 232 LRSYSCAFKIGTETFDDVEDVTVSGCTI 259
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 29/267 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I +V +FGAKG+GI T A + AI+ C + P G Y I LKS++TL I
Sbjct: 2 IVNVREFGAKGNGIDKVTEAFKKAIEECEKQGGG-TIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L EDYP +RW ++ AENA +V + G G +DGQ K+
Sbjct: 61 SGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW---- 116
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
W RPR + F C NV + +++ W ++ + C N +
Sbjct: 117 ---------WRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVH 167
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATD 238
++ I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 168 NVKIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITN 227
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 228 CIMAHGHGGVVIGSEMSGGVRNVVISN 254
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC-PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+V DFGA G+G DT A + AI+A G V P G YLT I LKS++TL I
Sbjct: 4 NVRDFGAVGNGQVKDTEAFKKAIEASWEQGGG--TVYVPAGVYLTGPIHLKSNITLYIES 61
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKN 125
ATL ++D+P +RW ++ AENA ++ + G G +DGQ +
Sbjct: 62 GATLKFSNDLDDFPLVYTRWEGEEQEAYSPLIYAENAENIAVVGFGTIDGQGEMW----- 116
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
W RPR V F C+NV + +++ W ++ + C+N + +
Sbjct: 117 --------WKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHN 168
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDS 239
+ I +++PN DGI+ E I+ ID GDD + K+ T P N+ T+
Sbjct: 169 VKIQNPYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRIPCENIAITNC 228
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDN 265
+ I +GS + +V N
Sbjct: 229 IMAHGHGGIVIGSEMSGGVRNVVISN 254
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 117/271 (43%), Gaps = 53/271 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV DFGA GDG+ DT +IQ+A++ P G + +RFP G YLT I LKSH+T+ E
Sbjct: 78 SVKDFGAVGDGVADDTLSIQTAVNCLPAGGR---LRFPEGTYLTGPINLKSHITIEFTEK 134
Query: 76 ATLLGGPRIEDYPE--------------ESSRW---------YVVLAENATDVGITGGGV 112
ATLLG + YP+ W ++ AE A D+ I G G
Sbjct: 135 ATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAEDIKIVGRGT 194
Query: 113 VDGQAMK---FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
VDG A +V KN+ + RPRL+ F C+ V V + + A
Sbjct: 195 VDGNAQNSQWWVDVKNQ----------------EVPRPRLIFFNRCKLVTVHGITAQNAA 238
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--- 226
W LH D+S+ ++PN D +D E + I + GDD I K+
Sbjct: 239 SWQLHPYFSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKI 298
Query: 227 -----YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P T + ++ AI LGS
Sbjct: 299 EIGRKFKQPANRHTIRNCIMQFGHGAITLGS 329
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 29/276 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V D+GAK DG +T A+Q AIDA K V F PG YL+ + LKS++ L + E
Sbjct: 20 VTDYGAKADGKTVNTVALQKAIDAAAKAGKGVVV-FAPGVYLSGALFLKSNMELRLDEGV 78
Query: 77 TLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQA-----MKFVV 122
+ G + YP +R W L ++V ++G G VDG + + +
Sbjct: 79 EIRGVQDLAAYPLMQTRVAGIEMKWPAALLNVYEQSNVRLSGKGTVDGDGKIWWDLYWKM 138
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
+ E + + W A D RPRL+ + V++ ++ L+ P +W +HI +
Sbjct: 139 RREEYEPKGLRW----AVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYSERVT 194
Query: 183 IRDMSIYG--DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLY 232
+ ++I D P+ DGIDI+ S++ ++ ID DDAIC K P
Sbjct: 195 VDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVNLPTE 254
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ TD+ +R ++ + +GS + + + D++T+
Sbjct: 255 RVRITDNVVRGGAAGVTIGSETSGGIRHIEVDHLTV 290
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 122/290 (42%), Gaps = 49/290 (16%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ ++GA GD DT AIQ+A+D C V P G Y+T +R+ TL + A
Sbjct: 11 IREYGATGDSDEPDTEAIQAALDEC--AESGGTVYVPSGTYVTGPLRVGDRTTLYLDAGA 68
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDG------------ 115
TL E +P SRW +L ++A +V ITG G +DG
Sbjct: 69 TLQFVGDYEAFPTVQSRWEGWNQYGFHPCLLVDDAENVSITGRGTIDGGGEYWWQFYDAP 128
Query: 116 ---------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ + KNE ++ + S+ H RP L G NV+V V L
Sbjct: 129 ESEIPDGLQERLAEFEEKNEKQDDVSSFTH---------RPPLFQIYGSENVSVSGVTLE 179
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W H+V +N I D++I + PN DGIDI+ S I+ I+ GDDAIC K+
Sbjct: 180 NSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKS 239
Query: 227 YTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P +T T+ + + +GS D + + N T
Sbjct: 240 GKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTF 289
>gi|423241439|ref|ZP_17222552.1| hypothetical protein HMPREF1065_03175 [Bacteroides dorei
CL03T12C01]
gi|392641332|gb|EIY35109.1| hypothetical protein HMPREF1065_03175 [Bacteroides dorei
CL03T12C01]
Length = 470
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 23/268 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
+ ++ +GAKGDG D AAIQ AI+AC V P G +L + LKS+V L++
Sbjct: 29 YDIMTYGAKGDGQTDDAAAIQRAINACSAAGGG-TVIIPAGHTFLCGPLYLKSYVNLHLE 87
Query: 74 EDATLLGGPRIEDYPEESSR--------WYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
++ LL P Y + + R W + ++ + ITG G +DG + F+
Sbjct: 88 PNSRLLANPDESIYTKSAFRENRGEGMMW--ISGKDLKQISITGTGEIDGNGIAFMG--- 142
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K + S+ D RP ++ + + ++ +R AYW +H++ C + I
Sbjct: 143 --KELDDSYELKPVTDFDP-RPHVLTLINVEKTVIRDITIRNSAYWTIHLIGCYDALIDG 199
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDSW 240
+S+ + N DGID++ S I I++GDD IC K G ++ T+
Sbjct: 200 ISLLNNLKIRNGDGIDVDHSKKVRIANCFIESGDDCICLKNRREFEEYGSCEDIVVTNCV 259
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + + ++F+N I
Sbjct: 260 MTSRSCAIKIGSENMDKIENVLFNNCII 287
>gi|160892041|ref|ZP_02073044.1| hypothetical protein BACUNI_04501 [Bacteroides uniformis ATCC 8492]
gi|156858519|gb|EDO51950.1| glycosyl hydrolase, family 43 [Bacteroides uniformis ATCC 8492]
Length = 979
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 31/272 (11%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ I V +GA GDG +T AIQ AIDAC VR GEY+T TI LKS V L
Sbjct: 56 VSIFDVRKYGAIGDGSTLNTTAIQKAIDACFVAGGGT-VRIAGGEYVTGTIELKSGVMLE 114
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVL------------AENATDVGITGGGVV--DGQA 117
+ + A LLG ++DYP++ R+ V+ AE A VGI G G + G+A
Sbjct: 115 VAKGARLLGSTNLKDYPDKVERFQSVMNVIHKYRISLIYAERAERVGICGEGEIYFRGEA 174
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
F + GA G RP + + C NV + + LR A W +
Sbjct: 175 KNFPGPET-----------IGALEG---RPFGIRMIECNNVVLKGITLRNSAAWMQSYIY 220
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PLYNLTA 236
C + ++++ N NND +D + N ++ + DDA+C K+ + P N+
Sbjct: 221 CRDLIFDGITVFNHANH-NNDALDPDGCKNVIVRNCFFSSHDDAMCLKSASAKPCENILI 279
Query: 237 TDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+S + +A KLG+ + D++ ++ + +
Sbjct: 280 ENSTFYSTCNAFKLGTDTQGDYRNIIARKLVL 311
>gi|219128212|ref|XP_002184312.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404113|gb|EEC44061.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 271
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 8/172 (4%)
Query: 99 AENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNV 158
A+N T+V ITGGGV+ G A ++ + +N D RPRL+ +
Sbjct: 1 AQNVTNVTITGGGVLYGNAEHYISYYDP------RYNRFEPIDPDPRRPRLLLINESSYI 54
Query: 159 NVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG 218
NV + L+ + W LHI ++ + + IYGD PNNDGID + S++ I+ ID
Sbjct: 55 NVHYLSLQNSSDWTLHIRNSEHVTVHKLRIYGDRRFPNNDGIDPDSSSHVHISHCVIDVA 114
Query: 219 DDAICPKTY--TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
DD +CPK T L+NLT T+ IR++S AIK GS + + ++F+NITI
Sbjct: 115 DDGVCPKARDSTRVLHNLTVTNVLIRSRSHAIKFGSHTDANMTDILFENITI 166
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D + +T AIQ AIDA V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDEL--NTEAIQKAIDAAASAGGGTVV-VPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
+FGAK DGI+ + AA A+ + P G + T IRL + +TL++ E A L
Sbjct: 8 NFGAKADGIYNNAAAFAEAVSVLHEAGG-GTLTVPAGIWKTGPIRLCAKMTLHLAEGAVL 66
Query: 79 LGGPRIEDYPEESSRW-----YVVLA----ENATDVGITGGGVVDG----------QAMK 119
P E YP +RW Y + A ++ V +TG GV+DG Q
Sbjct: 67 RFIPDPELYPPVYTRWEGVECYAMQACLYCADSDSVTVTGKGVIDGSGDTWWDLRWQKAD 126
Query: 120 FVVTKNEIKNVMVSWN-----HTGACSGDEC---RPRLVGFLGCRNVNVWNVRLREPAYW 171
K+ I+ + + N G G E RP LV F C NV + V L +W
Sbjct: 127 QGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNVRLEQVTLENSPFW 186
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-- 229
+H V CDN +R ++I + PN DGIDI+ N I ++ GDD I K+ +G
Sbjct: 187 TVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVGDDGIALKSGSGED 246
Query: 230 ------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
P N+T +R + +GS + + ++ +N
Sbjct: 247 GIRVNRPTRNVTVRGCTVRDAHGGMVIGSETAAGIRHVLAEN 288
>gi|354603309|ref|ZP_09021308.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
gi|353349186|gb|EHB93452.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
Length = 495
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ V DFGA DG +T A+Q AID ++ FP G Y++ T+ L S VTL++
Sbjct: 24 YRVSDFGAVADGTTLNTRALQRAIDVIHE-EGGGKLIFPLGRYVSGTLHLLSGVTLHLES 82
Query: 75 DATLLGGPRIEDYPEESS-RWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
A LLG DY E +LA ++G+TG G++D + + ++ + +
Sbjct: 83 GAVLLGSNNPYDYDREPGLNTAFLLARGQKNIGVTGEGLIDCRGRQTAYNLVDLIHRGLV 142
Query: 134 WNHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
+ G +E RP + F C V V + L+ A W +C N I +++ +
Sbjct: 143 DDRLGLDRPNESIRPMIFYFRECDGVTVEGISLKNSASWVQTYDQCKNLKIDRINVESNA 202
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP--LYNLTATDSWIRTKSSAIKL 250
NNDG+DI D N +T D DDAIC K+++G N+ D+ R+ +S IK
Sbjct: 203 YW-NNDGLDIVDCENVTVTNSYFDASDDAICLKSHSGAHMCRNILIRDNVARSGASGIKF 261
Query: 251 GSASWFDFK 259
G+ S FK
Sbjct: 262 GTVSAGGFK 270
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DT Q A++ A G + PPG Y T+ L S++ L++
Sbjct: 4 SLADFYPIADGETLDTYCFQRALNHLASRGGGT---LSVPPGRYHLGTLTLGSNINLHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
ATLL RIEDY + E S+ ++ A ++ I+G GV+DG + + +
Sbjct: 61 AGATLLASSRIEDYQQQLAQSQAELSQHVLLYAAGQRNIRISGKGVIDGNGDAWFAAEKD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
H G RPR+V F C V + + + + W +H+V C + I +
Sbjct: 121 ---------HQGYRLPRPQRPRIVVFEDCEQVTLEDFTIIQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSW 240
+I + PN D +DI+ ++ + DDAIC KT P + + ++
Sbjct: 172 TIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPAHLRRAARQILISNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ ++ D + + TI
Sbjct: 232 LRSYSCAFKIGTETFDDVEDVTVSGCTI 259
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 107/233 (45%), Gaps = 38/233 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGAKGDG DT+ IQ+AI +CP G + V FP G YLT I LKS++TL + +D
Sbjct: 86 NVRDFGAKGDGKTIDTSFIQAAIYSCPEGGR---VFFPGGIYLTGPIFLKSNITLELSKD 142
Query: 76 ATLLGGPRIEDYP------------EES--SRWYVVLAE---------NATDVGITGGGV 112
A LLG YP EE + W AE N +V I G G
Sbjct: 143 AVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIGEGT 202
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A N W G RPR V C+N+ + V ++ W
Sbjct: 203 IDGNA-----------NFETWWKEHKIKKG-AWRPRTVFLNQCKNILIEGVTIKNSPAWT 250
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+H + +N +++I N+PN DG++ E S N +I + GDD I K
Sbjct: 251 IHPFQSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIK 303
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GA GDG+ DTAAIQ AID C V Y++ + LKSH+TL+I TL
Sbjct: 28 YGATGDGVTKDTAAIQKAIDDCAAAGGGTVVLAGAPMYVSGPLVLKSHITLSIATGTTLA 87
Query: 80 GGPRIEDYP-----EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
G +DYP ES R ++ ++ ATD+ I GGG +DG+ + W
Sbjct: 88 GSEEHDDYPLIEELRESGRQPLLSSDKATDITINGGGTIDGRGQSW-------------W 134
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG-DFN 193
A + RPRL+ F ++ + N+ ++ W + + R+M++Y D
Sbjct: 135 PDRSAAN---KRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRV 191
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N DGID S++ +I V IDTGDD I K+
Sbjct: 192 SHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKS 224
>gi|354603314|ref|ZP_09021313.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
gi|353349191|gb|EHB93457.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
Length = 491
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 7/246 (2%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K +G +T++IQ AID ++ F G YLT +I L+S+VT+ ++E A LL
Sbjct: 27 FGIKSNGTTLNTSSIQKAIDYIHS-EGGGRLVFYVGRYLTGSINLRSNVTIQLNEGAVLL 85
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVT-KNEIKNVMVSWNHTG 138
G DYP +SS +V A +V ITG GV+DGQ + ++I+ +++
Sbjct: 86 GSTNPYDYPIDSSYCALVRAVKVDNVAITGKGVIDGQGREASYNLLDQIQKGIINDPAKY 145
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP-NN 197
R R + F C++V + + L+ W +CD I +++ D NN
Sbjct: 146 DRPDGSRRARTLYFRECKDVTIDGITLKNSGDWVQTYDQCDRLKINGITV--DSKAYWNN 203
Query: 198 DGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP--LYNLTATDSWIRTKSSAIKLGSASW 255
DG+DI D NT +T ID DD IC K+++ N+ + R+ +S IK G+ S
Sbjct: 204 DGLDIVDCRNTTVTNSFIDATDDGICLKSHSHEHMCENIEIRNCVARSSASGIKFGTVSA 263
Query: 256 FDFKAL 261
+K +
Sbjct: 264 GGYKNI 269
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 122/290 (42%), Gaps = 49/290 (16%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ ++GA GD DT AIQ+A+D C V P G Y+T +R+ TL++ A
Sbjct: 36 IREYGATGDSDALDTEAIQTALDEC--AESGGTVYVPSGTYVTGPLRVGDQTTLHLDAGA 93
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDG------------ 115
TL E +P SRW +L ++A +V ITG G +DG
Sbjct: 94 TLQFVGDYEAFPTVQSRWEGWNQYGFHPCLLVDDAENVSITGRGTIDGGGEYWWQFYDAP 153
Query: 116 ---------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ + KNE ++ + S+ H RP L NV+V V L
Sbjct: 154 ESEIPDGLQERLAEFEEKNEKQDDVSSFTH---------RPPLFQISESENVSVSGVTLE 204
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W H+V +N I D++I + PN DGIDI+ S I+ I+ GDDAIC K+
Sbjct: 205 NSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKS 264
Query: 227 YTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P +T T+ + + +GS D + + N T
Sbjct: 265 GKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVSNCTF 314
>gi|255530629|ref|YP_003091001.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255343613|gb|ACU02939.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 559
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I+++ D+GAKGDG DT AIQ+AIDAC V P G +L+ T++LKS+VT ++
Sbjct: 45 IYNIRDYGAKGDGESLDTVAIQAAIDACNAAGGGT-VFIPTGVFLSGTLQLKSNVTFHLS 103
Query: 74 EDATLLGGPRIEDY------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
LLG P+ Y P + + A NA + I G G +DG + F K +
Sbjct: 104 AGGKLLGSPKRAHYTAGKGVPAGNGNIVFLYAVNAERLSIEGKGTIDGNGLAFYNGKGD- 162
Query: 128 KNVMVSWNHTG----ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+TG G+ RP L+ F C + + + L+ AY C+ +++C +I
Sbjct: 163 --------NTGPGQKGIDGNFDRPHLLIFYQCTELRLHDAFLQASAYHCIRLLQCKQVYI 214
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
+ IY N NNDG IT + DDA
Sbjct: 215 DGVRIYNRVNK-NNDGFHFSSCQYVHITNCDVQCQDDA 251
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-ATIRLKSHVTLNIHEDATL 78
FG + DG AIQ AIDA +V PG + + +RLKSHV L + ATL
Sbjct: 63 FGGRADGRSDARPAIQKAIDAAHRAGG-GRVTLSPGVWFSRGPVRLKSHVELRVEAGATL 121
Query: 79 LGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFV------- 121
L P +DY P +RW + A DV ITGGGV+DG A
Sbjct: 122 LFSPEPDDYLPPVKTRWEGTEVYTYSPFIYAAGVEDVAITGGGVIDGNAQSRFHAWHNLA 181
Query: 122 ------VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ + + V V+ G G RP L+ G + V + R +W H+
Sbjct: 182 EPDFQRLRRMGFEGVPVAQRRFG--KGTHLRPPLIQVFGGKRVRLEGFTARNSPFWVNHL 239
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V D +R +++ D + PNNDG+D+E S +I + TGDD++ K+
Sbjct: 240 VYADEVVVRGITV--DSHFPNNDGVDVESSTRVLIENSRFRTGDDSVVIKS 288
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA GDG H +TA IQ+AI CP + V P G YLT + LKS++TL + E
Sbjct: 85 NILDFGAVGDGNHVNTAFIQAAIQVCPAFGR---VIIPKGTYLTGPLFLKSNITLELEEG 141
Query: 76 ATLLGGPRIEDYP---------------------EESSRWYVVLAENATDVGITGGGVVD 114
+ LLG E YP E ++ A N +V I G G +D
Sbjct: 142 SVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAINVENVNIIGKGTID 201
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
G + F + K ++W RPR + C+N+ V V ++ W +H
Sbjct: 202 GNS-DFDTWWFKAKEKRIAW-----------RPRTLFLNACKNILVEGVTIKNSPSWTIH 249
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK------TYT 228
+ D+ ++SI FN PN D +D E N +I GDD I K +
Sbjct: 250 PLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSGKIDISKK 309
Query: 229 GPLY--NLTATDSWIRTKSSAIKLGSASWFDFKALVFD 264
P+ N+ + +R+ A+ LGS K++ +
Sbjct: 310 NPVSSENINIRNCNMRSGHGAVVLGSEMSSGLKSIFIE 347
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 108/234 (46%), Gaps = 38/234 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGAKGDG DT+ IQ+AI +CP G + V FP G YLT I LKS++TL + +D
Sbjct: 86 NVRDFGAKGDGKTIDTSFIQAAIYSCPEGGR---VFFPGGIYLTGPIFLKSNITLELSKD 142
Query: 76 ATLLGGPRIEDYP------------EES--SRWYVVLAE---------NATDVGITGGGV 112
A LLG YP EE + W AE N +V I G G
Sbjct: 143 AVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIGEGT 202
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A N W G RPR V C+N+ + + ++ W
Sbjct: 203 IDGNA-----------NFETWWKEHKIKKG-AWRPRTVFLNQCKNILIEGLTIKNSPAWT 250
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H + +N +++I N+PN DG++ E S N +I + GDD I K+
Sbjct: 251 IHPFQSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKS 304
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 24/232 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHE 74
+V+ GAKGD I + A A+ C + P G Y + I S+V L I +
Sbjct: 43 NVLKLGAKGDSITNNKAVFDKAMALCKKKGGGTII-VPKGIYKINGPIHFVSNVNLKIEK 101
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK----FV 121
A + +DYP + W ++ A + T++ ITG G++DG+ K F
Sbjct: 102 GAKIKFSDNPQDYPLVLTSWEGTMLYNYSPLIYAVDCTNIAITGVGIIDGEGGKIWKSFK 161
Query: 122 VTKNEIKNVMVSWNHTGACSGDE-------CRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
+ KN+ NH D RP+++ FL C+N+ V NVR+ +WCLH
Sbjct: 162 AKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVENVRIENSPFWCLH 221
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+++ N +R +S Y N NNDGID E + + +I V D GDD + K
Sbjct: 222 LLKSQNITVRGIS-YKSLNY-NNDGIDPEYAKDVLIENVTFDNGDDNVAIKA 271
>gi|427385173|ref|ZP_18881678.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
gi|425727341|gb|EKU90201.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
Length = 486
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG+ +T +IQ+ ID V F G YLT +I LKS+V + + E A L+
Sbjct: 27 FGIKSDGVTLNTNSIQTGIDYIHKEGGGVLV-FNVGRYLTGSIELKSNVAIQLKEGAVLV 85
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
G DY E + ++ A + ++ I G GV+D Q + V+ N I V +
Sbjct: 86 GSLNPYDYNMEGPCYSMIRAISQKNIAIYGKGVIDAQGRQ--VSYNIIDQVHKGFIKDPL 143
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
+ RPR + F C+ + + + L+ W CD+ ++R +++ + NNDG
Sbjct: 144 ENDRPRRPRGIHFKQCQGITIEGITLKNTCDWTQEYEECDSLWVRGITV-DNKAYWNNDG 202
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKLGSAS 254
IDI D N +I D DDA+C K++ + N+ + +R+ ++ IKLG+ +
Sbjct: 203 IDIVDCRNVLIENSFFDASDDAVCLKSHKAEVACRNVVIRNCTMRSSANGIKLGTMT 259
>gi|423226672|ref|ZP_17213137.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628199|gb|EIY22233.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG+ +T +IQ+ I+ V F G YLT +I LKS+V + + E A L+
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIHKEGGGVLV-FNVGRYLTGSIELKSNVAIQLKEGAVLV 85
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
G DY E + ++ A N ++ I G G++D Q + V+ N I V +
Sbjct: 86 GSLNPYDYNMEGPCYSMIRAINQKNIAIYGKGIIDAQGRQ--VSYNIIDQVHKGFIKAPL 143
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
+ RPR + F CR + + + ++ W CD+ ++R +++ + NNDG
Sbjct: 144 ENDRPRRPRGIHFKQCRGITIEGITIKNTCDWTQEYEECDSLWVRGITV-DNKAYWNNDG 202
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKLGSAS 254
IDI D N +I D+ DDA+C K++ N+ + +R+ ++ IKLG+ +
Sbjct: 203 IDIVDCQNVLIENSFFDSSDDAVCLKSHKTETACRNVVIRNCTMRSSANGIKLGTMT 259
>gi|227820003|ref|YP_002823974.1| polygalacturonase [Sinorhizobium fredii NGR234]
gi|36958630|gb|AAQ87098.1| possible polygalacturonase [Sinorhizobium fredii NGR234]
gi|227339002|gb|ACP23221.1| polygalacturonase [Sinorhizobium fredii NGR234]
Length = 444
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE- 89
T+ IQSAI+ + +V GE++ + LKS V L++ + A L P E Y +
Sbjct: 17 TSEIQSAINTVS-ASGGGRVSLLAGEHMAGGLLLKSGVELHLADGALLRPIPDYEAYRDT 75
Query: 90 ------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A NA DV I+G G ++ F+ + +
Sbjct: 76 TVRVIAEKSNRGMIIARNAEDVRISGPGRIEAGGEHFITGDDPDVGTFIPA--------- 126
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
E RPR+V F GCR V + ++ W LH+ C++ IR+++I D PN DG+ ++
Sbjct: 127 EFRPRVVVFEGCRTVRLDGFQVAGSPMWTLHLADCEDVVIRNVTIANDRRLPNTDGMVLD 186
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP ++T + + S A+KLG+ S
Sbjct: 187 ACRRVLIEDCTISTADDGICLKTSAGPDGKAIGVCEDVTVRRCNVSSLSCALKLGTESHG 246
Query: 257 DFKALVFDNITI 268
DF +VF++ +
Sbjct: 247 DFDNVVFEDCKV 258
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 33/265 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +FGAKG+GI DT A + AI+ C + P G Y I LKS++TL I
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKAIEECEKQGGG-TIFVPAGIYHIGAIHLKSNMTLYIESG 62
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L + EE +RW ++ AENA +V + G G +DGQ K+
Sbjct: 63 AVL----KFSQDEEEYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKW------ 112
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
W RPR + F C NV + +++ W ++ + C N + ++
Sbjct: 113 -------WRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNV 165
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSW 240
I +++PN DGI+ E I+ ID GDD + K+ T P N+T T+
Sbjct: 166 KIQNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCI 225
Query: 241 IRTKSSAIKLGSASWFDFKALVFDN 265
+ + +GS + +V N
Sbjct: 226 MAHGHGGVVIGSEMSGGVRNVVISN 250
>gi|255533858|ref|YP_003094230.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255346842|gb|ACU06168.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 543
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 37/273 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA DG +TAAIQ AID C K +V P G YL+ T+ +KS+V L+I E
Sbjct: 26 NILDFGAVRDGKTLNTAAIQKAIDEC--SKKGGRVVIPKGVYLSGTLYMKSNVELHIEEG 83
Query: 76 ATLLGGPRIEDYPE------------ESSRWYV----VLAENATDVGITGGGVVDGQ--A 117
A L G +DYP+ E + Y + AEN +++ TG G ++G +
Sbjct: 84 AILKGSASFKDYPDNKVTYKNAFTHFEDGKLYANKAFIFAENVSNISFTGKGTINGSGDS 143
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+F + ++ S RP ++ + +++ + ++ L AYW + +
Sbjct: 144 PEFNLGNDD-------------TSISRSRPCMLLIIDSKHIKLNDLTLENSAYWLQNYLG 190
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP--LYNLT 235
C+ ++ + IY N N DG+DI D+ + ++ +D DD IC K++ + ++
Sbjct: 191 CEFLELKGLKIYNQSNY-NQDGMDI-DAKHVLVEGCTLDVDDDGICFKSHDPKRIVEDVV 248
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ I + +AIK G+ S K + N I
Sbjct: 249 VRNCKISSNCNAIKFGTKSMAGLKNVSISNCNI 281
>gi|251787804|ref|YP_003002525.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536425|gb|ACT05046.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 604
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 56/288 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GAKGDG +TAAIQ AIDAC G C+V PPG + + LKS +TLN+ +
Sbjct: 153 NITQYGAKGDGTTLNTAAIQKAIDACQIG---CRVDIPPGVFKIGALWLKSDMTLNLLQG 209
Query: 76 ATLLGGPRIEDYPEE-SSRWYVVLAENAT----------------DVGITGGGVVDGQAM 118
ATLLG + DYP+ S+ Y L+ A+ ++ ITG G++DG
Sbjct: 210 ATLLGSDKPSDYPDTYSNNAYSSLSRPASLINAIDKNHASGGKLKNIRITGKGIIDGNGW 269
Query: 119 KF---------------------------VVTKNEIKNVMVSWNHTGACSGDECRPRLVG 151
K ++ KN+++ + S + + ++ R L+
Sbjct: 270 KRSANVNDELGNGLPQYVKSDSDRVSLDGILAKNQVEAAVASGVNI-KTAYNQRRSSLIS 328
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
+NV + +V +R PA + I+ N + + + FNT N DG++ S N ++
Sbjct: 329 LSNVQNVYIADVTIRNPANHGVMILENSNV-VENGVTHQTFNTNNGDGVEFGSSQNIMVF 387
Query: 212 RVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
DTGDD I + G P+ N+ +++ R A+ LGS
Sbjct: 388 NSVFDTGDDCINFASGMGQQAQSQAPVKNVWLFNNYFRHGHGAVVLGS 435
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG +TA++Q A+D C +V P G YLT + L+S VTL + +D
Sbjct: 51 NVRDFGATGDGSTLETASLQQALDRCNVLGGG-EVLIPAGRYLTGGLSLRSRVTLRLDKD 109
Query: 76 ATLLGGPRIEDYPEESSRW-------YVVL--AENATDVGITGGGVVDG-QAMKFVVTK- 124
ATLLG P + YP RW Y L A +A ++ I G G ++G +A+ TK
Sbjct: 110 ATLLGSPDLAHYPVAQVRWEGKWIPGYTALLHALDARNIAIVGEGKIEGNEAVAGRPTKD 169
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
N ++ RP L+ F+ C V++ + W +H CDN R
Sbjct: 170 NPLR-----------------RPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFR 212
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+++I N DGIDI+ + +I I +GDD I K+ G
Sbjct: 213 NLTIRS--TKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRG 255
>gi|129749|sp|P15922.1|PEHX_ERWCH RecName: Full=Exo-poly-alpha-D-galacturonosidase; Short=Exo-PG;
Flags: Precursor
gi|148447|gb|AAA24842.1| exo-poly-alpha-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GAKGDG +T+AIQ AIDACP G C++ P G + T + LKS +TLN+ +
Sbjct: 153 NITQYGAKGDGTTLNTSAIQKAIDACPTG---CRIDVPAGVFKTGALWLKSDMTLNLLQG 209
Query: 76 ATLLGGPRIEDYPEESSRWYVV-----------LAENATDVG------ITGGGVVDGQAM 118
ATLLG DYP+ + V + +N++ VG I G G++DG
Sbjct: 210 ATLLGSDNAADYPDAYKIYSYVSQVRPASLLNAIDKNSSAVGTFKNIRIVGKGIIDGNGW 269
Query: 119 KFVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRLVGF 152
K K+E+ N + + N A + R LV
Sbjct: 270 KRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRRSSLVTL 329
Query: 153 LGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITR 212
G +N + +V +R PA + + +N + + I+ FN N DG++ +S N ++
Sbjct: 330 RGVQNAYIADVTIRNPANHGIMFLESENV-VENSVIHQTFNANNGDGVEFGNSQNIMVFN 388
Query: 213 VQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
DTGDD+I G P N +++ R A+ LGS
Sbjct: 389 SVFDTGDDSINFAAGMGQDAQKQEPSQNAWLFNNFFRHGHGAVVLGS 435
>gi|418408778|ref|ZP_12982092.1| polygalacturonase [Agrobacterium tumefaciens 5A]
gi|358004794|gb|EHJ97121.1| polygalacturonase [Agrobacterium tumefaciens 5A]
Length = 450
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 35/275 (12%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ H+ I A+G TA IQ AID V G +++ + LKS V L+
Sbjct: 1 MSAHTNITIAAEG---RDATADIQQAIDTASAAGGGV-VSLLAGRHVSGGLHLKSGVELH 56
Query: 72 IHEDATLLGGPRIEDY-----------PEESSRWYVVLAENATDVGITGGGVVDGQAMKF 120
+ +DA L I DY E+S R +V A+ A+++ +TG G ++ F
Sbjct: 57 LAQDAVL---APISDYDAYAHTPVSVIAEDSDRGMIV-AKGASNIAVTGPGRIEAGGENF 112
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
++ +E V RPR++ CR+V + N+ + W LH+V C++
Sbjct: 113 IIGDDEAMGTYVPAKK---------RPRVMVLESCRDVRLENLVVSGSPMWTLHMVDCED 163
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYN 233
R++ + D PN DGI ++ +I I T DD IC KT GP +
Sbjct: 164 LSFRNIRVENDRRLPNTDGIVLDACRRALIEDCSISTADDGICLKTSAGPDGKAVGACAD 223
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+T + + S A+KLG+ S+ DF + F++ +
Sbjct: 224 ITVRRCTVSSMSCALKLGTESFGDFTDVAFEDCKV 258
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 123/274 (44%), Gaps = 39/274 (14%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKP-CQVRFPPGEYLTATI 62
L S H S+ +FGA GDG+ +T A Q+AI NK Q+ P G +LT +
Sbjct: 34 LTASVYRPHSVSITEFGAVGDGMTRNTKAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSF 93
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGIT 108
L SH+T+++ +DA +LG P D+P ++ N TDV IT
Sbjct: 94 SLVSHLTVSLDKDAVILGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIIT 153
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G +DGQ + WN + + RP LV F+ V V N+
Sbjct: 154 GANGTIDGQGE-------------IWWNWFHNHTLNYTRPPLVEFMYSTRVVVSNLTFTN 200
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-- 225
+W +H V C ++ ++I ++PN DGID + S N I I GDD + K
Sbjct: 201 SPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSG 260
Query: 226 ------TYTGPLYNLTATDSWIRTKSSA-IKLGS 252
++ P N++ + +T+SSA I LGS
Sbjct: 261 WDEYGISFAYPSSNISIQNITGQTRSSAGIALGS 294
>gi|332717221|ref|YP_004444687.1| polygalacturonase [Agrobacterium sp. H13-3]
gi|325063906|gb|ADY67596.1| polygalacturonase [Agrobacterium sp. H13-3]
Length = 450
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 35/275 (12%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ H+ I A+G TA IQ AID V G +++ + LKS V L+
Sbjct: 1 MSAHTNITIAAEG---RDATADIQQAIDTASAAGGGV-VSLLAGRHVSGGLHLKSGVELH 56
Query: 72 IHEDATLLGGPRIEDY-----------PEESSRWYVVLAENATDVGITGGGVVDGQAMKF 120
+ +DA L I DY E+S R +V A+ A+++ +TG G ++ F
Sbjct: 57 LAQDAVL---APISDYDAYAHTPVSVIAEDSDRGMIV-AKGASNIAVTGPGRIEAGGENF 112
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
++ +E V RPR++ CR+V + N+ + W LH+V C++
Sbjct: 113 IIGDDEAMGTYVPAKK---------RPRVMVLESCRDVRLENLVVSGSPMWTLHMVDCED 163
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYN 233
R++ + D PN DGI ++ +I I T DD IC KT GP +
Sbjct: 164 LSFRNIRVENDRRLPNTDGIVLDACRRALIEDCSISTADDGICLKTSAGPDGKAVGACAD 223
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+T + + S A+KLG+ S+ DF + F++ +
Sbjct: 224 ITVRRCTVSSMSCALKLGTESFGDFTDVAFEDCKV 258
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
++ + FGA DG +T +IQ+AIDAC V PPG +LT + LKS+V LN+
Sbjct: 36 SVYPITKFGAVPDGYTLNTKSIQAAIDACTAKGGGV-VAVPPGLWLTGPLTLKSNVNLNL 94
Query: 73 HEDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------ 117
ATLL YP + W + A+NA ++ ITG G++DG
Sbjct: 95 AAGATLLFTKDKTQYPLVKANWEGFEQMRNQSPISAKNAVNIAITGNGIIDGNGDAWRMV 154
Query: 118 MKFVVTKNEIKNVMVS----------W------------NHTGACSGDE----------- 144
K +T+++ KN++ S W G S D+
Sbjct: 155 KKDKLTESQWKNLVASGGVLAEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQSVKDF 214
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP LV C V + V + WCLH + N +R++ + + N DGID+E
Sbjct: 215 FRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLES 274
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
+N +I + D GDD +C K+
Sbjct: 275 CSNVLIENSKFDVGDDGLCMKS 296
>gi|224537416|ref|ZP_03677955.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520942|gb|EEF90047.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
Length = 486
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG+ +T +IQ+ I+ V F G YLT +I LKS+V + + E A L+
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIHKEGGGVLV-FNVGRYLTGSIELKSNVAIQLKEGAVLV 85
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
G DY E + ++ A N ++ I G G++D Q + V+ N I V +
Sbjct: 86 GSLNPYDYNMEGPCYSMIRAINKKNIAIYGKGIIDAQGRQ--VSYNIIDQVHKGFIKDPL 143
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
+ RPR + F CR + + + ++ W CD+ ++R +++ + NNDG
Sbjct: 144 ENDRPRRPRGIHFKQCRGITIEGITIKNTCDWTQEYEECDSLWVRGITV-DNKAYWNNDG 202
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPKTYTGPL--YNLTATDSWIRTKSSAIKLGSAS 254
IDI D N +I D+ DDA+C K++ N+ + +R+ ++ IKLG+ +
Sbjct: 203 IDIVDCQNVLIENSFFDSSDDAVCLKSHKTETACRNVVIRNCTMRSSANGIKLGTMT 259
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 126/289 (43%), Gaps = 28/289 (9%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
LLL T + +++ FGA G TAAIQ AID PG+ V PPG YLT +
Sbjct: 4 LLLPHKRTIMAKLNILAFGADASGQQLATAAIQHAIDIAAPGDT---VVVPPGRYLTGAL 60
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVV 113
LK+H+ + A LLG +EDYP +R W ++ DV + G G +
Sbjct: 61 FLKNHLIFELQTGAVLLGSRELEDYPLRQTRVAGIDMVWPTGIINILQCHDVCVCGSGTI 120
Query: 114 DGQAM----KFVVTKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLR 166
DGQ KF T +E ++ ++ G D RPR + V + R
Sbjct: 121 DGQGAVWWHKFWGT-DENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSR 179
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
E +W +H+ + ++ + + + P+ DGIDI+ S + ++ DD IC K
Sbjct: 180 ESGFWNIHLCYSQHLYLHHLQVE-NSGGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKA 238
Query: 227 YTGP---LYNLTATDSWIRT----KSSAIKLGSASWFDFKALVFDNITI 268
G TA D IR S I LGS + + ++ +NIT
Sbjct: 239 GRGAEAERIGATARDIVIRECELLHGSGITLGSETSGGIEQVLIENITF 287
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 115/270 (42%), Gaps = 36/270 (13%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
DT AIQ+A+D C + +V P G YL+A +R+ TL + A L ++P
Sbjct: 43 DTEAIQAALDDC--AGEGGEVYLPSGTYLSAPLRVGDDTTLRVANGAELRFVGDFREFPT 100
Query: 90 ESSRW------------YVVLAENATDVGITGGGVVDGQA-----------MKFVVTKNE 126
SRW YV AEN T ITG GVVDG +F E
Sbjct: 101 VESRWEGWNQDGFHPCLYVADAENVT---ITGEGVVDGGGSHWWDLVETPEAEFPDDLKE 157
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ S + S RP L+ C NV V V LR +W H+V ++ I D+
Sbjct: 158 RLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGVTLRNSPFWNTHVVYSEDVTIHDV 217
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--------PLYNLTATD 238
SI + PN DGIDI+ S ++ ID GDDAIC K+ P N+ T+
Sbjct: 218 SIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTN 277
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + D + + N T
Sbjct: 278 CTVEHGHGGVVVGSETAGDVRHVTVTNCTF 307
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 25/233 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHE 74
+++ GAKGD + + A A+ C N + P G Y + I S+V L + +
Sbjct: 45 NILKLGAKGDSVSDNKKAFDKAMALCKKNNGGTII-VPKGIYKINGPIHFVSNVNLKLEK 103
Query: 75 DATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK----F 120
A + EDY P + W ++ A N T++ I+G G +DG+ K F
Sbjct: 104 GAKIKFSDNPEDYLPMVLTSWEGTMLYNYSPLIYANNCTNIAISGEGTIDGEGGKTWKTF 163
Query: 121 VVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+NE KN NH G RP+++ FL C+N+ V N+R+ +WCL
Sbjct: 164 KAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIRIENSPFWCL 223
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H+++ ++ IR +S Y N NNDGID E + + +I V D GDD + K
Sbjct: 224 HLLKSESITIRGIS-YKSLNH-NNDGIDPEYAKDVLIENVTFDNGDDNVAIKA 274
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLT 59
+L+ LS + S+ DFG DGI +T A Q AID K + P G++LT
Sbjct: 17 RLVPGLSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLT 76
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWYVVLAENA--TDV 105
L SH+TL + +DAT+L +D+P E + Y L TDV
Sbjct: 77 GCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDV 136
Query: 106 GITGG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
ITG G +DGQ + V WN + + R LV F+ N+ V NV
Sbjct: 137 AITGNNGTIDGQGL-------------VWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVT 183
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
L +W LH V + I+ ++I PN DG+D + S+N I I GDDA+
Sbjct: 184 LINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAV 243
Query: 225 KT 226
K+
Sbjct: 244 KS 245
>gi|242238419|ref|YP_002986600.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242130476|gb|ACS84778.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 448
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 22/228 (9%)
Query: 54 PGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVG 106
PG Y T T+ L S L + ATLL DY E S ++ A ++
Sbjct: 41 PGIYRTGTLVLPSDFCLQLDAGATLLASADYGDYAAAQTLTTAELSNSALLYARGQQNIT 100
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ G G +DG A F ++ + + + +H RPR+V F C+ + + ++ L
Sbjct: 101 LCGAGKIDGNADAFFSSQADEQGYRLPHSH---------RPRMVVFEDCQAIRLQDITLT 151
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H+V C FI + + D N D +DI+ I+ DD IC KT
Sbjct: 152 QSPMWTVHLVSCAQVFIARICVDNDLTMANTDALDIDSCQQVHISDCHFSAADDGICLKT 211
Query: 227 ------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
PL N+T T+ +R+KS AIK+G+ ++ D + + N +I
Sbjct: 212 TRKTPQIQRPLRNVTVTNCTLRSKSCAIKIGTETFADIENVTISNCSI 259
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FGA GDG+ +T A Q+AI ++ P G +LT + L SH+TL
Sbjct: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA +LG ED+P ++ N TDV ITG G +DG
Sbjct: 101 SLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN S D RP LV + V + N+ +W +H
Sbjct: 161 QGS-------------IWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V C ++++ I ++PN DGID + S+N I I TGDD I K+ Y
Sbjct: 208 VYCSQVTVQNVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAY 267
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ RT++S I +GS
Sbjct: 268 GRPSTNIIIHRLVGRTQTSGIAIGS 292
>gi|251787803|ref|YP_003002524.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536424|gb|ACT05045.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 602
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GAKGDG +T+AIQ AIDACP G C++ P G + T + LKS +TLN+ +
Sbjct: 153 NITQYGAKGDGTTLNTSAIQKAIDACPTG---CRIDVPAGVFKTGALWLKSDMTLNLLQG 209
Query: 76 ATLLGGPRIEDYPEESSRWYVV-----------LAENATDVG------ITGGGVVDGQAM 118
ATLLG DYP+ + V + +N++ VG I G G++DG
Sbjct: 210 ATLLGSDNAADYPDAYKIYSYVSQVRPASLLNAIDKNSSAVGTFKNIRIVGKGIIDGNGW 269
Query: 119 KFVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRLVGF 152
K K+E+ N + + N A + R LV
Sbjct: 270 KRSADVKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRRSSLVTL 329
Query: 153 LGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITR 212
G +N + +V +R PA + + +N + + I+ FN N DG++ +S N ++
Sbjct: 330 RGVQNAYIADVTIRNPANHGIMFLESENV-VENGVIHQTFNANNGDGVEFGNSQNIMVFN 388
Query: 213 VQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
DTGDD+I G P N +++ R A+ LGS
Sbjct: 389 SVFDTGDDSINFAAGMGQDAQKQEPSQNAWLFNNFFRHGHGAVVLGS 435
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 4 LLLLSTTHIH----IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT 59
L++ S +H ++++ DFGA DG +T A Q AI C N +V P G+YLT
Sbjct: 56 LVIRSIPQVHFSDKLYNINDFGAVADGKTLNTLAFQKAIQECA-ANGGGRVLVPNGKYLT 114
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGG 110
I L+S+V L++ + A +L +DYP + W ++ A+N T++ ITG
Sbjct: 115 GAIHLESNVNLHLEDHAEILFSLNPKDYPIVHTSWEGTEVMNYSPLIYAKNKTNIAITGK 174
Query: 111 GVVDGQA----------------MKFVVTKNEIKN--VMVSWNHTGA-------CSGDEC 145
G ++GQA K + ++N+ N V+V G G
Sbjct: 175 GTLNGQADSTNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFGDGRYL 234
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP + F C V ++++ +W LH ++ +N I +++ + + PNNDG D E S
Sbjct: 235 RPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPEYS 292
Query: 206 NNTVITRVQIDTGDDAICPK 225
N +I +TGDD I K
Sbjct: 293 QNILIRNCTFNTGDDCIAIK 312
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLT 59
+L+ LS + S+ DFG DGI +T A Q AID K + P G++LT
Sbjct: 46 RLVPGLSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLT 105
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWYVVLAENA--TDV 105
L SH+TL + +DAT+L +D+P E + Y L TDV
Sbjct: 106 GCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDV 165
Query: 106 GITGG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
ITG G +DGQ + + WN + + R LV F+ N+ V NV
Sbjct: 166 AITGNNGTIDGQGL-------------IWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVT 212
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
L +W LH V + I+ ++I PN DG+D + S+N I I GDDA+
Sbjct: 213 LINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAV 272
Query: 225 KT 226
K+
Sbjct: 273 KS 274
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ I+ + +GA+GDG+ +TAAI +AI+AC G V P G+Y+T I L+SH+TL
Sbjct: 1 MAIYDITSYGAQGDGLQDNTAAIAAAIEACSAGGG-GTVYVPAGDYVTGPIVLRSHITLQ 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM---- 118
+ + L PR + YP +RW ++ V I G GV++GQ
Sbjct: 60 LEAGSVLRFTPRFDAYPPVQTRWSGYEMWGYSPLIYGNGLKQVAIKGEGVIEGQGQAWWD 119
Query: 119 ------------------KFV----VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCR 156
K V V + +K+ +V W RP L+ + C
Sbjct: 120 AYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQT------QFLRPPLLQLMHCE 173
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
V + + L+ +W H+V CD+ +R + TPN DG+D++ +N I+ D
Sbjct: 174 EVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFD 233
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD +C K+ P N+ T+ + + LGS + + + N
Sbjct: 234 VGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISN 290
>gi|116625911|ref|YP_828067.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229073|gb|ABJ87782.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 553
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 25/261 (9%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
T I +H+++D+GAKGDG DT A+Q+AIDAC ++ V P G ++ T+ +KS+V
Sbjct: 38 TAGIRVHNILDYGAKGDGTTLDTEALQAAIDAC-TADRGGTVLVPAGVFVIGTVEMKSNV 96
Query: 69 TLNIHEDATLLGGPRIEDYPE------------ESSRWYVVLAENATDVGITGGGVVDGQ 116
TL I LLG + Y E ++ A NA ++ + G G +DGQ
Sbjct: 97 TLRIAAQGKLLGSADGKQYSAAAGIPLHGDSTLEDGNVGLIFAVNAENITVEGPGTIDGQ 156
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+F ++ + V+ GA RP + F CRN+ + N+ L A+ + ++
Sbjct: 157 GAQF---RSPSRGVLPPSGRGGA-----DRPYHLLFHRCRNLRIRNLSLVACAFHSIRVI 208
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTA 236
+ + ++ ++ I+ N+ NNDG S ++ + T DDA G +T
Sbjct: 209 QSSSVWMENLRIHNRVNS-NNDGFHFISSEFVHVSNCDVQTQDDACA---LFGTCRYVTV 264
Query: 237 TDSWIRTKSSAIKLGSASWFD 257
T+ T+ S + G + D
Sbjct: 265 TNCTFSTRWSVFRFGGGNPQD 285
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FGA GDG +T A ++A+ Q+ P G +LT +I+L SH+TL
Sbjct: 47 HSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHLTL 106
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDG 115
+ +AT+LG + DYP ++ E DV ITG G +DG
Sbjct: 107 FLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVITGDNGTIDG 166
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q V WN + D R LV + +++ + N+ R+ +W +H
Sbjct: 167 QGA-------------VWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHP 213
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++DM++ N+PN DGID + S I I GDDAI K+
Sbjct: 214 VYCRNVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKS 264
>gi|398351203|ref|YP_006396667.1| polygalacturonase [Sinorhizobium fredii USDA 257]
gi|390126529|gb|AFL49910.1| polygalacturonase [Sinorhizobium fredii USDA 257]
Length = 444
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 24/252 (9%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE- 89
TA IQSAID +V GE++ + LKS V L++ DA L P E Y +
Sbjct: 17 TAEIQSAIDQASV-RGGGRVSLLAGEHVAGGLVLKSGVELHLALDAVLRPIPDYEAYRDT 75
Query: 90 ------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD 143
E S +++A +A ++ ITG G ++ F+ + +
Sbjct: 76 TVSVIAEKSNRGMIVARSAENLRITGPGKIEAGGEHFIRGDDPDVGTFIPA--------- 126
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
E RPR++ F GCRNV++ + + W LH+ C++ IR+++I D PN DG+ ++
Sbjct: 127 EFRPRVIVFEGCRNVDLDGLEVTGSPMWTLHLADCEDVVIRNVTIANDRRLPNTDGMVLD 186
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWF 256
+I I T DD IC KT GP ++T + + S A+KLG+ S
Sbjct: 187 ACRLVLIEDCVIWTADDGICLKTSAGPDGKAIGSCEDVTVRRCTVSSLSCALKLGTESHG 246
Query: 257 DFKALVFDNITI 268
DF+ +VF++ +
Sbjct: 247 DFRNVVFEDCQV 258
>gi|160881342|ref|YP_001560310.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160430008|gb|ABX43571.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 491
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 25/273 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+++++D+GA DG+ + A IQ AID QV P G YL+ TI LKS++ ++
Sbjct: 49 VYNILDYGAVADGVTNNAATIQKAIDEATIHGG--QVVVPAGNYLSGTIILKSNIDFHLE 106
Query: 74 EDATLLGGPRIEDYPE---------ESSRW---YVVLAENATDVGITGGGVVDGQAMKFV 121
A L+ + ED + +++ W + A + ++ I+G G + GQ K
Sbjct: 107 MGAVLISSLKEEDILDFAKLFEDDNQTTGWDGGCFIFACHEENITISGQGTIYGQGDKVF 166
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
N H + RPR N+ V ++ +R+ A+W LH+ C +
Sbjct: 167 FDDNADNGA-----HECPLNVSAFRPRTTFLEDVTNLTVKDITIRDAAFWTLHMAGCRHV 221
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT------GPLYNLT 235
++D+ I D NNDGID + + +I+ + TGDDAI K G N+
Sbjct: 222 LVKDIKILNDIRGANNDGIDPDCCQDVMISGCLVKTGDDAIVVKATKPMSQKYGACENIV 281
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ + ++ S +K+G+ + D + ++ + I
Sbjct: 282 INNCILYSRDSGLKIGTETHGDIRNVMLSDCVI 314
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGAKGDG +T A +SAI G+ Q+ PPG++LT + L SH TL
Sbjct: 44 HSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTL 103
Query: 71 NIHEDATLLGG------PRIEDYPEESS-------RWYVVLAENATDVGITGG-GVVDGQ 116
+H+DA +LG P IE P + ++ N TDV ITGG G + GQ
Sbjct: 104 FVHKDAVILGAQDEAAYPLIEILPSYGAGRDGGGRHASLIFGTNLTDVVITGGNGTIHGQ 163
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W+ A + RP L+ + V + N+ L + W +H
Sbjct: 164 GQYW-------------WDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPT 210
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYN 233
N I+ ++I +PN DGI+ + S N +I I +GDD I K+ G +
Sbjct: 211 YSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFG 270
Query: 234 LTATDSWIR------TKSSAIKLGSASWFDFKALVFDNIT 267
+ D IR S+ I LGS K + +NIT
Sbjct: 271 MPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRAENIT 310
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT +IQSAI ACP G + V FP G YLT I LKS++T+ + +
Sbjct: 85 NVKDFGAVGDGKRIDTFSIQSAIMACPDGGR---VYFPEGVYLTYPIFLKSNITIELGKG 141
Query: 76 ATLLGGPRIEDYP--------EESSRWYV--------------VLAENATDVGITGGGVV 113
A LLG E YP +E S Y+ + + +V I G GV+
Sbjct: 142 AVLLGAKEREMYPILPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENVNIIGDGVI 201
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + +W + RPR V C+NV + + +R W +
Sbjct: 202 DGNSS------------FDTWWYDAKVKRIAWRPRTVYLNKCKNVLIEGITIRNSPSWTI 249
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H + N +++I + PN DG+D E + +I + GDD I K+
Sbjct: 250 HPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKS 302
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 28/235 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GA GDG+ +T A + AI AC +V P G +LT I+L+S V L++ E
Sbjct: 67 ITRYGAVGDGVTKNTRAFRDAIRACHRAGG-GRVVVPRGRFLTGAIQLRSQVELHVREGG 125
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM-------- 118
T+L DY P +RW + A D+ ITG G +DGQ M
Sbjct: 126 TVLFSTDPRDYLPMVFTRWEGTECWNYSSFIYARGQQDLAITGRGTLDGQGMAGPWKSWR 185
Query: 119 ----KFVVTKNEIKNVM---VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+V + E++ + V + G RP ++ F CRN+ + ++ + EP W
Sbjct: 186 DPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMW 245
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V C N +R++ + G N N+DG+D E +++ +IT + T DD+I K+
Sbjct: 246 TIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIAVKS 298
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 28/235 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GA GDG+ +T A + AI AC +V P G +LT I+L+S V L++ E
Sbjct: 52 ITRYGAVGDGVTKNTRAFRDAIRACHRAGG-GRVVVPRGRFLTGAIQLRSQVELHVREGG 110
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM-------- 118
T+L DY P +RW + A D+ ITG G +DGQ M
Sbjct: 111 TVLFSTDPRDYLPMVFTRWEGTECWNYSSFIYARGQQDLAITGRGTLDGQGMAGPWKSWR 170
Query: 119 ----KFVVTKNEIKNVM---VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+V + E++ + V + G RP ++ F CRN+ + ++ + EP W
Sbjct: 171 DPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMW 230
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V C N +R++ + G N N+DG+D E +++ +IT + T DD+I K+
Sbjct: 231 TIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIAVKS 283
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 49/292 (16%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + +FGA+ +T AIQ+A+D C V PPG Y+T +R+ TL +
Sbjct: 31 YDIREFGAQSGSDDSNTEAIQTALDEC--AGTGGTVSVPPGTYVTGPLRVGDRTTLQLEA 88
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
ATL E +P SRW +L + A V ITG G +DG
Sbjct: 89 GATLRFVGDYEAFPTVKSRWEGWDQVGFHPCLLVDGADTVSITGRGTIDGNGEYWWQFYG 148
Query: 118 -------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
+ +N+ ++ + S+ H RP L+ NV V V
Sbjct: 149 EPESTLPDGLQDRLAEFEAQNDKQDDVSSFTH---------RPPLLQVFDAENVTVSGVT 199
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
LR +W H+V +N I D++I + PN DGIDI+ S I+ I+ GDDAIC
Sbjct: 200 LRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICI 259
Query: 225 KTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
K+ P +T T+ + + +GS D + + N T
Sbjct: 260 KSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTF 311
>gi|373952519|ref|ZP_09612479.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889119|gb|EHQ25016.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 504
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGIT 108
+V P G + TA I++KS V L + DA L G DY E V+ AE ++ IT
Sbjct: 56 RVIVPAGNFATAPIQMKSSVELYLAPDAILYGSTNRLDYNE--GEMSVIWAEGQHNIAIT 113
Query: 109 GGGVVDGQAMKFVVTKNEIKNV--MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
G G ++GQ V E+ + + + RP L+ F C +N+ + LR
Sbjct: 114 GKGTINGQGRDVVEHALELLRAGKITDEQYLAKRPNEANRPNLIYFKNCERINITGITLR 173
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A W + +C + I ++++ + NNDG+DI DS N IT + DDAIC K+
Sbjct: 174 NAASWVQNYKQCKDLVIDSITVHSN-EYWNNDGLDIVDSKNVKITNSYFNAADDAICLKS 232
Query: 227 YTGPLYNLTATDSWI-----RTKSSAIKLGSASWFDFKALVFDNITI 268
+ T + WI R+ ++A K+G+ S +FK + N+T+
Sbjct: 233 ---EVKGETCENIWIENCIARSSANAFKIGTGSLGNFKNITVKNLTV 276
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DF DGI DT A ++AI + PPG YLT IRL S++ I
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAERQGG-GHIVVPPGTYLTGPIRLISNLVFEIQAG 65
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
ATLL +E +P SRW + +N T+V +TG G +DGQ + E
Sbjct: 66 ATLLFTDDVEQFPTVDSRWEGVKSKAYMPCIYGKNLTNVILTGSGTLDGQGTNWWKLHRE 125
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ RP L+GF + + ++ L W +H + C + I+++
Sbjct: 126 TPEKLAY-----------PRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNI 174
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-------GPLYNLTATDS 239
SI ++PN DGID E N I ID GDD I K+ T N+T ++
Sbjct: 175 SILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSACENITISNC 234
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDN 265
+ A+ LGS + + + N
Sbjct: 235 TMVHGHGAVVLGSEMSGNIRNVTISN 260
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQ------SAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
H S++DFGA GDG+ +T A Q S+I A G + P G +LT + L S
Sbjct: 27 HSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGG--AMLYVPEGRWLTGSFNLTS 84
Query: 67 HVTLNIHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITG-GG 111
H TL + A +LG P I+ P +V EN DV ITG G
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DGQ K+ W+ G + R LV F+ N+ + NV L +W
Sbjct: 145 TIDGQGAKWW-----------RWSKLGLL--NHTRGHLVEFVSSTNIIISNVTLVNSPFW 191
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YT 228
LH V C N I+ ++I ++PN DGID + S+N I I GDD I K+
Sbjct: 192 TLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEY 251
Query: 229 GPLYNLTATDSWIRTKSSAIKLGSA 253
G Y +++ IR + K G+A
Sbjct: 252 GIAYGQPSSNIHIRRVTGQTKRGAA 276
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 49/292 (16%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + +FGA+ +T AIQ+A+D C V PPG Y+T +R+ TL++
Sbjct: 9 YDIREFGAQSGSDDSNTEAIQTALDEC--AGTGGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
ATL E +P SRW +L + A V ITG G +DG
Sbjct: 67 GATLRFVGDYEAFPTVKSRWEGWDQVGFHPCLLVDGADTVSITGRGTIDGNGEYWWQFYG 126
Query: 118 -------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
+ +N+ ++ + S+ H RP L+ NV V V
Sbjct: 127 EPESTLPDGLQDRLAEFEAQNDKQDDVSSFTH---------RPPLLQVFDAENVTVSGVT 177
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
LR +W H+V +N I D++I PN DGIDI+ S I+ I+ GDDAIC
Sbjct: 178 LRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICI 237
Query: 225 KTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
K+ P +T T+ + + +GS D + + N T
Sbjct: 238 KSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVTVTNCTF 289
>gi|266619779|ref|ZP_06112714.1| polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288868656|gb|EFD00955.1| polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 483
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 32/267 (11%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+SV DFGA G+G DT AIQ+AID C V GE+++ T+ +KS V L +
Sbjct: 4 FYSVKDFGAAGNGKSLDTEAIQAAIDRCSQKGGG-YVLLEKGEFISGTLYMKSGVYLIVT 62
Query: 74 EDATLLGGPRIEDYPEES--SRWY--------VVLAENATDVGITGGGVVDGQAMKFVVT 123
A L I Y ++ +R+ + AE A + GI G G +DG A F
Sbjct: 63 ASAKLTASGSIAAYGTDTHYNRYVNEHDMDRCFIYAEEAENFGIMGEGTIDGNAECF--- 119
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
NE G RP ++ FL CRNV + ++L + A W + +N ++
Sbjct: 120 PNE---------------GSIYRPMMIRFLRCRNVKLKGIKLHQAAAWTTAFLDSENIWV 164
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--TYTGPLYNLTATDSWI 241
D+ I D N DG+D + N + R +I DD +C + + P+ N+ +D
Sbjct: 165 EDLEICND-KRYNGDGLDFDGCRNVFVARCRISGTDDNLCLQAGSREYPVENVHISDCHF 223
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
+ + I++G S D + + T
Sbjct: 224 TSICAGIRIGLKSIGDIRNVTVSGCTF 250
>gi|373953358|ref|ZP_09613318.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889958|gb|EHQ25855.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 523
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 19/267 (7%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + +GA DG +T AIQ AI+ N V P G+++T I LKS++ L+
Sbjct: 37 YPITRYGALPDGKTDNTLAIQKAINTAAE-NGGGTVLIPAGQFVTGVINLKSNINLHFEN 95
Query: 75 DATLLGGPRIEDY-PEESSRWYVVLAENATDVGITGGGVVDGQA----------MKFVVT 123
A LL DY P+++S +++A +A + ITG G +DG+ ++
Sbjct: 96 GAALLATTNRADYGPQKASA--LIVATDAQHIAITGKGTIDGRGDDLLKDIYRMLRAGTL 153
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
K++ W+ + RP L+ F+ C +V + N+ ++ W C + I
Sbjct: 154 KDDEWQTYNDWHQMRPAESN--RPHLIDFIKCSDVTIKNITIKNGLCWIQDYRSCQDMVI 211
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYNLTATDSWI 241
+++ + NNDGID+ D N ++ + DD IC K+ G N+ + I
Sbjct: 212 DSITVVSN-TFLNNDGIDLVDCKNVKLSNSFFNVADDGICLKSSDPNGACENIDISHCRI 270
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
R+ +SA K+G+AS+ FK + +I +
Sbjct: 271 RSSASAFKMGTASFGGFKKIKVRDIEV 297
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 38/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI ++ P G++LT + L SH+TL
Sbjct: 34 HSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 93
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG-GGVVDG 115
+ +DA +LG +D+P E R + ++ N TDV ITG G +DG
Sbjct: 94 WLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDG 153
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN + D RP LV + V + N+ +W +H
Sbjct: 154 QGS-------------IWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHP 200
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TY 227
V C +++++I ++PN DGID + S++ I I TGDD I K +Y
Sbjct: 201 VYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSY 260
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGS 252
P N+T +T S+ I +GS
Sbjct: 261 ARPSKNITIRGLVGQTTSAGIAIGS 285
>gi|391230412|ref|ZP_10266618.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391220073|gb|EIP98493.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 481
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ + GA +T AIQ AID C V FPPG +LT T+ LK++ TL +
Sbjct: 19 SITETGAIASPSAINTRAIQQAIDRCADAGGGV-VYFPPGTFLTGTLWLKTNTTLYLEAG 77
Query: 76 ATLLGGPRIEDY------PEE-------SSRWYVVLAENATDVGITGGGVVDGQAMKFVV 122
TLL P ++Y PE+ ++ ++++A +V + G G++DG F
Sbjct: 78 CTLLACPERDEYNAIDCFPEQDVVAHQAANGTHLLIAYRCDNVTLAGRGIIDGNPSAFFN 137
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
++ +H DE +++ F+G +V + NV L +W ++++ CD
Sbjct: 138 QGVIARDPEREGSHDHYKLPDERPGQMLYFVGSTHVRLENVSLANACFWSVYLLDCDTVK 197
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLT 235
I ++I D PN+DG+ N V+ IDT DD I + + P+ N
Sbjct: 198 ISGLTIRSDRKIPNSDGLHFNCCRNLVVDNCNIDTADDCIVLRGHYKVLGSANVPMENAV 257
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ +RT+ A++LG + +F N+ I
Sbjct: 258 VSNCILRTRCCALRLGVGDG-TIRDCLFSNLVI 289
>gi|325285350|ref|YP_004261140.1| glycoside hydrolase family protein [Cellulophaga lytica DSM 7489]
gi|324320804|gb|ADY28269.1| glycoside hydrolase family 28 [Cellulophaga lytica DSM 7489]
Length = 460
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 32/267 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNIH 73
++++D+GAK +G DT A+Q ID C +V P G+ L TI LK +VTL +
Sbjct: 21 YNIMDYGAKANGKTLDTKAVQKTIDLCSK-QGGGKVVIPAGKTVLIGTIYLKDNVTLYLE 79
Query: 74 EDATLLGGPRIEDYPEESSR----------WYVVLAENATDVGITGGGVVDGQAMKFVVT 123
+ LLG P +DY + + ++ A+ A I G G ++G
Sbjct: 80 NGSILLGSPDYKDYATNTHKNTYKNEPHMDRCLIFAKEANSFSIEGNGTINGNGF----- 134
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
N T A G RP ++ FL C N+ + NV L A W + C+ +
Sbjct: 135 ---------PKNFTKAKGG---RPMVLRFLNCNNIKIKNVTLINSASWTSAWLYCNEIVV 182
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--GPLYNLTATDSWI 241
+ I N N DG+D + N ++ +T DD+IC +T P N+ +
Sbjct: 183 DGIKIISRVNQ-NGDGLDFDGCTNVRVSNSSFNTSDDSICLQTSRPDKPCKNIVINNCVF 241
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
+K +A+++G AS DF+++ N T
Sbjct: 242 TSKWAAMRIGLASRGDFESVTVSNSTF 268
>gi|409440610|ref|ZP_11267622.1| Polygalacturonase [Rhizobium mesoamericanum STM3625]
gi|408748212|emb|CCM78811.1| Polygalacturonase [Rhizobium mesoamericanum STM3625]
Length = 432
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 55 GEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY--------PEESSRWYVVLAENATDVG 106
G +++ IRL S VTL I E ATL P E Y E S R Y+V A + V
Sbjct: 32 GRHISGPIRLASRVTLVIQEGATLEFMPDYELYRGNSVSVIAEGSDRAYIV-ANRSDGVA 90
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
I G G + F +E G + +E RPR++ F C +V + +
Sbjct: 91 IVGTGKIVASGHAFSTGFDET---------VGTYTPNERRPRVLVFEDCSDVRLEGFVIE 141
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H+VRC + + DM+++ + PN DGI I+ +N + V I T DD IC KT
Sbjct: 142 DSPMWTVHLVRCRDVIVADMAVFNNRQLPNTDGIVIDSCSNVTVRDVVIRTADDGICLKT 201
Query: 227 Y-----TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVF 263
G + +D + +KS A+K+G+ S+ D + + F
Sbjct: 202 SRSEMGIGCCEKIEVSDCVVESKSCALKIGTESFGDIRDVRF 243
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQ------SAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
H S++DFGA GDG+ +T A Q S+I A G + P G +LT + L S
Sbjct: 27 HSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGG--AMLYVPEGRWLTGSFNLTS 84
Query: 67 HVTLNIHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITG-GG 111
H TL + A +LG P I+ P +V EN DV ITG G
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DGQ K+ W+ G + R LV F+ N+ + NV L +W
Sbjct: 145 TIDGQGAKWW-----------RWSKLGLL--NHTRGHLVEFVSSTNIIISNVTLVNSPFW 191
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YT 228
LH V C N I+ ++I ++PN DGID + S+N I I GDD I K+
Sbjct: 192 TLHPVYCTNVLIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEY 251
Query: 229 GPLYNLTATDSWIRTKSSAIKLGSA 253
G Y +++ IR + K G+A
Sbjct: 252 GIAYGQPSSNIHIRRVTGQTKRGAA 276
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA+ DG T AIQ AIDAC +V+F PG+YLT ++ +KS V L++ E L
Sbjct: 57 DFGAREDGKTISTKAIQQAIDACAKKGG-GKVQFRPGKYLTGSVFIKSGVFLHVDEGVEL 115
Query: 79 LGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
LG +EDYP+ ++R W L GI+G G+++GQ F ++++
Sbjct: 116 LGSQSLEDYPQINTRVAGIEMIWPAALVNINGQQKAGISGKGIINGQGKPFWDAYWKLRS 175
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI--RDMS 187
D RPR V G ++ + +V L++ +W +H++ + +
Sbjct: 176 EYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHLLYSSYVTVDGIIIK 235
Query: 188 IYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ P+ DGIDI+ S I ID DD C K+
Sbjct: 236 NNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKS 274
>gi|271502414|ref|YP_003335440.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
gi|270345969|gb|ACZ78734.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
Length = 604
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 125/286 (43%), Gaps = 54/286 (18%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GAKGDG +T+AIQ AIDACP G C++ P G + T + LKS++TLN+ + A
Sbjct: 156 ITQYGAKGDGTTLNTSAIQKAIDACPTG---CRIDVPAGIFKTGALWLKSNMTLNLLQGA 212
Query: 77 TLLGGPRIEDYPEE------SSRWYVVLAENA-----------TDVGITGGGVVDGQAMK 119
TLLG DYP+ SS+ NA T++ I G GV+DG K
Sbjct: 213 TLLGSDNAADYPDAYKIYSYSSQMRPASLINAIDKTSSAVGTFTNIRIVGKGVIDGNGWK 272
Query: 120 FVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRLVGFL 153
K+E+ N + + N A + + R L+
Sbjct: 273 RSADAKDELGNSLPQYVKSDNSKVSKDGILAKNQVAAATATGMDTKTAYSQRRSSLITLR 332
Query: 154 GCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRV 213
G +N V +V +R PA + + N + + + FN N DG++ +S N ++
Sbjct: 333 GVQNAYVADVTIRNPANHGVMFLESQN-VVENGVTHQTFNANNGDGVEFGNSQNIMVFNS 391
Query: 214 QIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
DTGDD+I G P N +++ R A+ LGS
Sbjct: 392 VFDTGDDSINFAAGMGQAAQKQEPSQNAWLFNNYFRHGHGAVVLGS 437
>gi|424876089|ref|ZP_18299748.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393163692|gb|EJC63745.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 454
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGG 81
A+GD DT +Q+AID +V G ++ ++L+S V L++ ATL
Sbjct: 12 AQGD----DTVRLQAAIDGLSASGGG-RVELMAGIHVCRGLQLRSGVDLHLAAGATLRPV 66
Query: 82 PRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
P Y + E S +++A++A +G+TG G ++ F+V +E +
Sbjct: 67 PDYAAYAQTSVSVIAEKSDRGMIVAKDARRIGLTGAGRIEAGCDSFIVGDDETVGTFIPA 126
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
E RPR+V F C V + +V + W LH V C + +R+++I D
Sbjct: 127 ---------EFRPRVVVFEDCDEVEISSVHISRSPMWTLHFVNCTDVAVRNVTIDNDRRL 177
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSA 247
PN DGI ++ VI +I T DD IC KT GP N+ +++ S A
Sbjct: 178 PNTDGIVLDACRGAVIEDCRISTADDGICLKTSIGPDRVAIGRCENILVRRCSVQSLSCA 237
Query: 248 IKLGSASWFDFKALVFDNITI 268
+K+G+ + D +VF++ ++
Sbjct: 238 LKIGTETHGDVTNVVFEDCSV 258
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 29/278 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I V DFGAKGDG D+ AIQ AIDA + V P G YL +I +KS VTL I
Sbjct: 34 IFKVSDFGAKGDGTTLDSPAIQRAIDAA--SHSGGTVIVPAGTYLCGSIFVKSGVTLQIE 91
Query: 74 EDATLLGGPRIEDYPEESSR-------WYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
+DAT+ G +I DYP +R W L N + + +
Sbjct: 92 KDATIRGSQKITDYPLMPTRVAGIEMTWPAALV-NVYEQKNAAITGGGTIDGDGKIFWDS 150
Query: 127 IKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI-----VRC 178
+ + ++ G A D RPRLV ++ + + L+ +W +HI +
Sbjct: 151 YRTLRSDYDPKGLRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYSHDIEV 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
D IR+ D P+ DGIDI+ S ++ I DDA+C K P
Sbjct: 211 DGVTIRNNE---DGKGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVNRP 267
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ DS +R ++ + GS + F+ + IT+
Sbjct: 268 TEDVVLKDSVVRAGAAGVTFGSETSGGFRNVEAYGITV 305
>gi|224537907|ref|ZP_03678446.1| hypothetical protein BACCELL_02796 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520470|gb|EEF89575.1| hypothetical protein BACCELL_02796 [Bacteroides cellulosilyticus
DSM 14838]
Length = 787
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 26/268 (9%)
Query: 6 LLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLK 65
L H +++ FGA D T AI +AI+ C +V P G Y + TI LK
Sbjct: 15 LTGNAHSTEYNIFQFGASKDTSVVQTQAINAAIENCHR-QGGGKVIIPSGIYKSGTIFLK 73
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAENATDVGITGGGVVD 114
+V L++ A L +D+P + Y ++ A +A ++ ITG G +D
Sbjct: 74 DNVELHLESGAYLYASDNYDDFPVQPQASYRSQKDAGGWVSLIYAVDAKNISITGKGTID 133
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
G+ K I +G RPR + F+ C++V+V + +R A W H
Sbjct: 134 GKGKG---RKGRI---------SGLGGDRNGRPRNILFISCKDVHVEGITMRNSALWNQH 181
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-TYTGPLYN 233
+ C++ I + +Y N NNDGIDI+ +++ ID+ DD I K T T P N
Sbjct: 182 YLNCEDVTIDHIKVYNHSNG-NNDGIDIDGCRRFILSNSIIDSDDDGIVLKSTGTAPCEN 240
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKAL 261
+ ++ + + ++AIK G+ S FK +
Sbjct: 241 VIISNCIVSSFANAIKCGTESTGGFKNI 268
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 119/268 (44%), Gaps = 47/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV DFGAKGDG DT +IQ+AI+ C P N ++ FP G YLTA I LKSH+TL+I E
Sbjct: 78 SVRDFGAKGDGFSDDTVSIQTAIN-CLPNNG--RLYFPEGVYLTAPIVLKSHITLDISEK 134
Query: 76 ATLLGGPRIEDY---PEESS--------------------RWYVVLAENATDVGITGGGV 112
A LLG P Y P + ++ AE A D+ I G GV
Sbjct: 135 AKLLGLPDQSAYNVIPGTAKDIITGEDIHFGTWEGNAVPMHQALIFAEYAEDIRIVGRGV 194
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A +N +K + RPRL+ F C+ + V + + A W
Sbjct: 195 IDGNAEAGGWWEN-VKERNIP------------RPRLLFFNRCKLITVHGITVCNAASWQ 241
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H D+ I ++PN D +D E +N I+ + GDD I K+
Sbjct: 242 IHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIG 301
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P N + ++ A+ LGS
Sbjct: 302 RKFKQPAENHNIRNCLMQFGHGAVTLGS 329
>gi|302829543|ref|XP_002946338.1| hypothetical protein VOLCADRAFT_44529 [Volvox carteri f.
nagariensis]
gi|300268084|gb|EFJ52265.1| hypothetical protein VOLCADRAFT_44529 [Volvox carteri f.
nagariensis]
Length = 143
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
+CRPRLVG V + + LR+ A+W LH+ ++ F+R + + GD N PNNDGIDI+
Sbjct: 1 QCRPRLVGVCESSGVQITEMALRDSAFWTLHVRDSEHVFMRGLVVEGDMNFPNNDGIDID 60
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTATDSWIRTKSSAIKLGSASWFDFKA 260
S+N + + + T DDA+C K +G + ++ ++ +R++S+A+KLGS + D
Sbjct: 61 GSSNVTLLQSYVATADDAVCIKATSGGERAVRHVLVSNCTLRSRSAAVKLGSETKADMTN 120
Query: 261 LVFDNITI 268
+ F ++ +
Sbjct: 121 ITFSHLKV 128
>gi|373851794|ref|ZP_09594594.1| glycoside hydrolase family 28 [Opitutaceae bacterium TAV5]
gi|372474023|gb|EHP34033.1| glycoside hydrolase family 28 [Opitutaceae bacterium TAV5]
Length = 466
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ + GA +T AIQ AID C V FPPG +LT T+ LK+++TL +
Sbjct: 4 SITETGAIASPSAINTRAIQQAIDRCADAGGGV-VYFPPGTFLTGTLWLKTNITLYLEAG 62
Query: 76 ATLLGGPRIEDY------PEE-------SSRWYVVLAENATDVGITGGGVVDGQAMKFVV 122
TLL P ++Y PE+ ++ ++++A +V + G G +DG F
Sbjct: 63 CTLLACPERDEYNAIDCFPEQDVVAHQAANGTHLLIAYRCDNVTLAGRGTIDGNPSAFFN 122
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
++ +H DE +++ F+G +V + NV L +W ++++ CD
Sbjct: 123 QGVIARDPEREGSHDHYKLPDERPGQMLYFVGSTHVRLENVSLVNACFWSVYLLDCDTVK 182
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLT 235
I ++I D PN+DG+ N V+ IDT DD I + + P+ N
Sbjct: 183 ISGLTIRSDRKIPNSDGLHFNCCRNLVVDNCDIDTADDCIVLRGHYKVLGDADVPMENAI 242
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++ +RT+ A++LG + +F N+ I
Sbjct: 243 VSNCILRTRCCALRLGVGDG-TIRDCLFSNLVI 274
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 21/228 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ V DFG GDG +T AIQ AID C N + F PG YL+ +I +K ++ I
Sbjct: 82 VYFVNDFGGIGDGKTINTEAIQKAIDKCAE-NGGGTIAFKPGTYLSGSIFIKKNIHFKIG 140
Query: 74 EDATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFV--- 121
++ T+LG I DY E +R W L N +V I G G++DGQ F
Sbjct: 141 KNVTILGSQDINDYKEIDTRVAGIEMKWPAALINVSNQENVIIDGEGLIDGQGKVFWDYY 200
Query: 122 --VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ KNE + + W D RPR + +N+ + ++ +++ +W +H++ +
Sbjct: 201 WDLRKNEYEPKGLRW----IVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYSE 256
Query: 180 NTFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S +I ID DD C K
Sbjct: 257 KITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLK 304
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 37/245 (15%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFGA DG +TAA + AI C N +V P G+YLT I L+++V L++ +
Sbjct: 58 YNINDFGAVADGKTLNTAAFEKAIQTCTE-NGGGKVLVPNGKYLTGAIHLENNVNLHLED 116
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
A +L +DYP + W ++ A+N T+V ITG G+++GQA
Sbjct: 117 KAEILFSLNPKDYPIVHTSWEGTELMNYSPLIYAKNKTNVAITGKGILNGQADSTNWWIW 176
Query: 118 --------MKFVVTKNEIKN--VMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNV 160
K + ++N+ N V+V G RP + F C V V
Sbjct: 177 SGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIFGEGRYLRPNFIEFFECNTVLV 236
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
++ + +W LH ++ +N I +++ + + PNNDG D E S N VI +TGDD
Sbjct: 237 KDITVINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPEYSQNIVIKNCTFNTGDD 294
Query: 221 AICPK 225
I K
Sbjct: 295 CIAIK 299
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAKGDG DT A+Q+AI +CP G V FPPG YL + LKS++T+ I +DA
Sbjct: 84 VRDFGAKGDGKTLDTFAVQAAIMSCPEGG---TVVFPPGTYLLTPVFLKSNLTIEIQKDA 140
Query: 77 TLLGGPRIEDYP---------------------EESSRWYVVLAENATDVGITGGGVVDG 115
LLG YP S +V +V I G GV+D
Sbjct: 141 VLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRIIGQGVIDA 200
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
A W RPR + C+N+ + + +R W +H
Sbjct: 201 NAN------------FDDWWFNPKVKRIAWRPRSIFLNRCKNILIEGITIRNSPSWTVHP 248
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ C + + ++I N+PN DGI+ E +N +I +I GDD + K
Sbjct: 249 LFCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKA 299
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+++V D+GAKGD + +T AIQ AIDA V F PG YLT + + ++V NI
Sbjct: 49 VYNVTDYGAKGDALEMNTTAIQKAIDAAEQAGGGI-VTFSPGIYLTGALFVGNNVNFNIP 107
Query: 74 EDATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAM----KF 120
+ TL+G I+DY + +R W L + I+G GV++G+ K+
Sbjct: 108 KGTTLIGSQDIDDYKKIDTRVAGVEMNWPSALVNIIGKKNAAISGDGVINGRGKVFWDKY 167
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ E + W C RPR + C NV V N+ L +P +W LHI+
Sbjct: 168 RSMRKEYDPKGLRWIVDYDCE----RPRGILIAECENVTVENIVLYQPGFWSLHILYSKY 223
Query: 181 TFIRDMSIYGDFN--TPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + P+ DGIDI+ S ++ I+ DD C K
Sbjct: 224 VTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLK 270
>gi|336427665|ref|ZP_08607662.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009040|gb|EGN39040.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 438
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++++D+GA DG + IQ+AI+ C +V P G +L+ TI+LKS+V L + +
Sbjct: 3 YNIMDYGALPDGKTNNQKQIQAAIEDCAKTGG--RVLVPAGNFLSGTIQLKSNVELYLEK 60
Query: 75 DATLLGGPRIEDYPEESS---------RWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+ L ED + S + A +A ++ I G G +DGQ K + N
Sbjct: 61 GSVLTASNSPEDIIDFSEDRDAMDGIENGCFLYACHARNITIAGEGTIDGQGRKVYLDDN 120
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ H + R R + V + + +W LH+ C N +
Sbjct: 121 ADEGF-----HECPLAVAGFRARTTYLEDVDGLQVRGITFYDACFWTLHMAGCQNVIVDG 175
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY-------NLTATD 238
+ I+ + PNNDGID + N +I I++GDD+I K T P++ N+ T+
Sbjct: 176 IRIFNNDRGPNNDGIDPDGCRNVIIRNCIIESGDDSIVLKA-TRPVWEKYGNCENIVITN 234
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++ SA+K+G+ +W D + ++F + +
Sbjct: 235 CILHSRDSALKIGTETWGDIRNVIFGDCVV 264
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 120/266 (45%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG-GGVVDG 115
+ +DA +LG D+P E R + ++ N TDV +TG G +DG
Sbjct: 101 WLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN + + RP LV F+ V + NV +W +H
Sbjct: 161 QGS-------------IWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TY 227
V C I++++I ++PN DGID + SN+ I I TGDD I K +Y
Sbjct: 208 VYCSQVIIQNVTILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISY 267
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGS 252
P N+ +T SSA I +GS
Sbjct: 268 ARPSTNIIIRRLVGKTNSSAGIAIGS 293
>gi|317490827|ref|ZP_07949263.1| polygalacturonase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920374|gb|EFV41697.1| polygalacturonase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 25/267 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ F DGI DT Q A+D + + G Y+ + L S+ L++
Sbjct: 4 AISQFSPAADGITRDTQKFQHALDLIS-AHGGGTLYVDSGRYMLGGLLLGSNTCLHLEAG 62
Query: 76 ATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQA-MKFVVTKNEI 127
A L+ +D+ + E S + A NA ++ I G G + G A F T NE
Sbjct: 63 AELIVSDNYQDFAQARTHSSAECSDRAFLYALNAQNITICGSGKIFGSADAYFSATPNE- 121
Query: 128 KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMS 187
G E RPR++ F GC+NV + + W +H+V C+N I +++
Sbjct: 122 ---------QGYRIPLELRPRIIVFEGCQNVQLREFTIEHAPMWTIHLVSCNNVKISELT 172
Query: 188 IYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSWI 241
+ D N D +DI+ IT DDAIC KT P + + ++ +
Sbjct: 173 VQNDLTMANTDALDIDSCQLVHITNSLFSAADDAICLKTTRKPAFLQQPAQQIVISNCTL 232
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
++KS A+K+G+ ++ D + + N TI
Sbjct: 233 QSKSCALKIGTETFADIEDVSVSNCTI 259
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
V LL S +V +GA+GDG DT AIQ AIDAC G V +++TA
Sbjct: 12 VTTLLPFSGLAAKTCNVRAYGARGDGATKDTVAIQKAIDACA-GKGGTVVIGGSSKFITA 70
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEESS-----RWYVVLAENATDVGITGGGVVDG 115
+ LKS + + TL D+PE+ R ++ A+ A D+ ITGGGV+DG
Sbjct: 71 PLTLKSKMIFRVEAGTTLEASTDHNDFPEKEEFKDHGRQAMLTAKAAEDITITGGGVIDG 130
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ + W + RPRL+ F C+++ + N+ + A W +
Sbjct: 131 RGESW-------------WPQP-----NLPRPRLIVFDHCKHIRMENITAQNSAMWQIVP 172
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
D+ R+M + + N DGID S VI V IDTGDD + K+
Sbjct: 173 YYSDDLVFRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKS 223
>gi|255531484|ref|YP_003091856.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344468|gb|ACU03794.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 489
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
LL + +I++ FG K +G +T +IQ A++ +RF G YLT TI
Sbjct: 13 LLFSIPAFSENIYNASLFGIKSNGSTMNTNSIQKAVNYISEKGGGT-LRFYVGRYLTGTI 71
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVV 122
+LKS+VT+ + E A ++G I DY + ++ A+ ++GI G GV++GQ VV
Sbjct: 72 QLKSNVTILLEEGAIIVGSTNIYDYNIDVPNPALIYAKGVNNIGIKGKGVIEGQGR--VV 129
Query: 123 TKNEIKNVMVSWNHTGACSGD-------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ + + H G D RP+ + F C VN+ + + A W
Sbjct: 130 AYDLLDQI-----HKGLIVDDIKNDRPTNRRPKAIYFRECNQVNIDGINIWNAADWVQVY 184
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY--TGPLYN 233
+C I ++++ + NNDGIDI D + + ID DDAIC K++ T N
Sbjct: 185 DQCQQVLINNITVKSN-EFWNNDGIDIVDCKDFKLLNSFIDAADDAICLKSHDRTKRCEN 243
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFK 259
+ + R+ ++ IK G+ S +K
Sbjct: 244 IEIRNCVARSSANGIKFGTVSAGGYK 269
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA ++G P D+P ++ N TDV ITG G +DG
Sbjct: 101 SLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W H+ + RP LV + +V + N+ + +W +H
Sbjct: 161 QGA-----------IWWDWFHSNTL--NYTRPHLVELMYSTDVVISNLTFKNSPFWNIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C ++ ++I N+PN DGID + S N I + GDD I K+
Sbjct: 208 VYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKS 258
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 49/292 (16%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + +FGA+ +T AIQ+A+D C V PPG Y+T +R+ TL++
Sbjct: 9 YDIREFGAQSGSDDSNTEAIQTALDEC--AGTGGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
ATL E +P SRW +L + V ITG G +DG
Sbjct: 67 GATLRFVGDYEAFPTVQSRWEGWDQIGFHPCLLVDGTDTVSITGQGAIDGNGEYWWQFYG 126
Query: 118 -------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
+ +N+ ++ + S+ H RP L+ NV V V
Sbjct: 127 EPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTH---------RPPLLQIFDAENVTVSGVT 177
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
LR +W H+V +N I D++I PN DGIDI+ S I+ I+ GDDAIC
Sbjct: 178 LRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICI 237
Query: 225 KTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
K+ P +T + + + +GS D + + N T
Sbjct: 238 KSGKDAEGREVGEPASQITVANCTVEAGHGGVVIGSEMSGDVRDVTVSNCTF 289
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 25 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTL 84
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA ++G P D+P ++ N TDV ITG G +DG
Sbjct: 85 SLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDG 144
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W H+ + RP LV + +V + N+ + +W +H
Sbjct: 145 QGA-----------IWWDWFHSNTL--NYTRPHLVELMYSTDVVISNLTFKNSPFWNIHP 191
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C ++ ++I N+PN DGID + S N I + GDD I K+
Sbjct: 192 VYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKS 242
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FGA GDG+ +T A Q+AI ++ P G +LT + L SH+TL
Sbjct: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ +DA +LG ED+P ++ N TDV ITG G +DG
Sbjct: 101 WLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN + D RP LV + V + N+ +W +H
Sbjct: 161 QGS-------------IWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V C ++++ I ++PN DGID + S+N I I TGDD I K+ Y
Sbjct: 208 VYCSQVTVQNVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAY 267
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ +T++S I +GS
Sbjct: 268 GRPSTNIIIHRLVGKTQTSGIAIGS 292
>gi|402491495|ref|ZP_10838283.1| polygalacturonase [Rhizobium sp. CCGE 510]
gi|401809894|gb|EJT02268.1| polygalacturonase [Rhizobium sp. CCGE 510]
Length = 454
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-- 87
+TA +Q+AIDA +V G ++ ++L+S + L++ A L P Y
Sbjct: 16 NTARLQAAIDALSASGGG-RVELLAGIHICRGLQLRSGIDLHLAAGAILRPVPDYSAYGH 74
Query: 88 ------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A + + +TG G ++ F++ +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-ARASRRISLTGPGRIEAGCESFIIGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V F GC V + +V + W LH V C N +R+++I D PN DGI
Sbjct: 127 --EFRPRVVVFEGCDEVEISSVHISRSPMWTLHFVDCTNVAVRNVTIENDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI +I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCEISTADDGICLKTSIGPDGVAIGRCENILVRRCAVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D +VF++ +I
Sbjct: 245 HGDITNIVFEDCSI 258
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ I+ + +GA+GDG+ +TAAI +AI+AC G V P G+Y+T I L+SH+TL
Sbjct: 1 MAIYDITSYGAQGDGLQDNTAAIAAAIEACSAGGG-GTVYVPAGDYVTGPIVLRSHITLQ 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM---- 118
+ + L PR + Y +RW ++ V I G GV++GQ
Sbjct: 60 LEAGSMLRFTPRFDAYAPVQTRWSGYEMWGYSPLIYGNGLKQVAIKGEGVIEGQGQAWWD 119
Query: 119 ------------------KFV----VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCR 156
K V V + +K+ +V W RP L+ + C
Sbjct: 120 AYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQT------QFLRPPLLQLMHCE 173
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
V + + L+ +W H+V CD+ +R + TPN DG+D++ +N I+ D
Sbjct: 174 EVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFD 233
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD +C K+ P N+ T+ + + LGS + + + N
Sbjct: 234 VGDDCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISN 290
>gi|255532776|ref|YP_003093148.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345760|gb|ACU05086.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 530
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 21 GAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG 80
GA DG + A IQ ID G +V PPG +++ + LKS V L++ A LLG
Sbjct: 30 GAVADGQTNNAAVIQQLIDKAAAGGG-GRVIVPPGNFMSGPVFLKSGVDLHLELGARLLG 88
Query: 81 GPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV------VTKNEIKNVMVSW 134
DY + R +V A+N ++ I+G G++DGQ + + + E+K SW
Sbjct: 89 STDRADYGAYNGRPALVSAKNQNNISISGKGIIDGQGQELMLDIFKKLRSGEMKQDS-SW 147
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
+ G R ++ F C NV V V L++ W C+ I +++
Sbjct: 148 LYKRPGIG---RTMILTFTSCTNVKVTGVTLKDATDWVQDYRECNGVIIDGITVQSTAYW 204
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--GPLYNLTATDSWIRTKSSAIKLGS 252
NNDG+DI DS N IT I+ DDA+C K+ N+ + +R+ ++ +K G+
Sbjct: 205 -NNDGLDITDSKNVRITNCFINASDDALCFKSENPDSSCENVFVDNCTLRSSANGLKFGT 263
Query: 253 ASWFDFKALVFDNITI 268
+ F+ N++I
Sbjct: 264 RNSGGFRNFKIRNLSI 279
>gi|423226738|ref|ZP_17213203.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627011|gb|EIY21052.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 469
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 23/269 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNI 72
I++++D+GAKGDG+ D AAIQ+AID C V P G ++ + L S V L++
Sbjct: 28 IYNIMDYGAKGDGVTDDAAAIQAAIDQCSKSGGG-TVLVPAGRTFMCSPFHLASFVELHL 86
Query: 73 HEDATLLGGP--------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
++ LL P D E W + ++ +V ITG G +DG + F+
Sbjct: 87 EPNSCLLANPDEAAYTLSAFRDNRGEGMMW--IYGQDLKEVSITGTGAIDGNGVSFMG-- 142
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K + S+ D RP ++ + + +V +R AYW +H++ C++ I
Sbjct: 143 ---KELEDSYELKPVTDFDP-RPHVLTLINIEKTVIRDVTIRNSAYWTVHLIGCNDVSID 198
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDS 239
+SI + N DGID++ S N I I++GDD IC K G ++ T+
Sbjct: 199 GISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYGSCEDIVVTNC 258
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 259 TMVSRSCAIKIGSENMDKINNVLFNNCII 287
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 8 STTHIHIHSVI----------DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
S+ HI SV+ DFGA GDG DT A+Q +D C +V P GEY
Sbjct: 40 SSAKNHIESVLPKPVVKLNVRDFGAVGDGKTKDTLALQQTLDRCSLLGG-GEVFVPAGEY 98
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRW-------YV--VLAENATDVGIT 108
LT + L+S+ L + DA+LLG P + DYP RW Y+ + A +A ++GI
Sbjct: 99 LTGALVLRSNTLLRLDGDASLLGSPDVADYPLTQVRWEGRWIKGYIGFISAMDAENIGIV 158
Query: 109 G-GGVVDGQAMKFVVTK-NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
G G +V A+K V + + +N P L+ F+ CRNV V +
Sbjct: 159 GKGKIVGNTAIKGRVERATQFRN-----------------PALLEFVSCRNVRVEDCFTS 201
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H C+N ++++++ DGID++ + VI DT DD I K+
Sbjct: 202 QNDMWSIHPTYCENITFKNVTVHS-----GADGIDVDSCKHVVIDGCDFDTHDDCISLKS 256
Query: 227 YTG 229
G
Sbjct: 257 GRG 259
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 50/279 (17%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
+T AI +AI+AC G V P G+Y+T I L+SH+TL + + L PR + YP
Sbjct: 18 NTPAIAAAIEACSAGGG-GTVYVPAGDYVTGPIVLRSHITLQLEAGSVLRFTPRFDAYPP 76
Query: 90 ESSRWY---------VVLAENATDVGITGGGVVDGQAM---------------------- 118
+RW ++ V I G GV++GQ
Sbjct: 77 VQTRWSGYEMWGYSPLIYGNGLKQVAIKGEGVIEGQGQAWWDAYRVIRAGGAAPASEHLP 136
Query: 119 KFV----VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
K V V + +K+ +V W RP L+ + C V + + L+ +W H
Sbjct: 137 KLVELNRVLTDTVKSNIVEWQT------QFLRPPLLQLMHCEEVVLEGITLQNSPFWNTH 190
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
+V CD+ +R + TPN DG+D++ +N I+ D GDD +C K+
Sbjct: 191 LVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDEDGRR 250
Query: 227 YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
P N+ T+ + + LGS + + + N
Sbjct: 251 VGRPTENVAVTNCTMLHGHGGVVLGSETAGGIRNVTISN 289
>gi|302871635|ref|YP_003840271.1| glycoside hydrolase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574494|gb|ADL42285.1| glycoside hydrolase family 28 [Caldicellulosiruptor obsidiansis
OB47]
Length = 454
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 21/253 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAK DG+ + T AIQ AID C N V P G YL+ IRLKS+VTL + E A
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAIDICFE-NGGGVVVIPAGIYLSRPIRLKSNVTLYLEEGA 74
Query: 77 TLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVD---GQAMKFVVTKNE 126
+ IEDY + + W + A N D+ + G G +D M F N+
Sbjct: 75 VIKATNNIEDYYQIGYYHNEWGEVTSFLYAMNEKDIAVEGKGTIDLSGSSFMDFSRAFNQ 134
Query: 127 IKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ +S EC+P + + F C N+++ V + + W + I
Sbjct: 135 FEE--LSQLDKEQFEETECKPICRPNQPIFFYNCENISLSGVSIIDSPCWTVCIHSSKYI 192
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTATD 238
+ ++ I + PN+DGI + N ++T GDD + T P N+ ++
Sbjct: 193 KVHNIRIMNNLRVPNSDGIHLCSCENVILTDSFFTCGDDCVAISGITNWDKPCENIIVSN 252
Query: 239 SWIRTKSSAIKLG 251
++T+S+A+++G
Sbjct: 253 CIMQTRSAAVRMG 265
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V FGA GDG DT A+Q AIDA P G + P G Y TA ++LKS +TL + +
Sbjct: 133 NVKQFGAIGDGKSDDTRALQRAIDAVPKGGT---LYVPAGTYYTAPLQLKSDMTLYLAKG 189
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFV----- 121
ATLLG I+ Y SRW ++ +N +V ITG GV+DG +
Sbjct: 190 ATLLGSSNIDAYKPIWSRWEGTEMYRYMSLITGDNVRNVTITGEGVIDGNGETPIHDNAG 249
Query: 122 ---------VTKNEIKNVMVSWNHTGACSGD--ECRPRLVGFLGCRNVNVWNVRLREPAY 170
K + + VS + S RP L+ FL +N+ + V ++
Sbjct: 250 NTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQGVTVQNSPS 309
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V CD+ + D+ I + N DG+D + N I GDD I K+
Sbjct: 310 WTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDDIAIKS 365
>gi|399043687|ref|ZP_10737760.1| endopolygalacturonase [Rhizobium sp. CF122]
gi|398057869|gb|EJL49801.1| endopolygalacturonase [Rhizobium sp. CF122]
Length = 433
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 55 GEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP--------EESSRWYVVLAENATDVG 106
G +++ IRL S VTL+I ATL P E Y E S+R Y+V A++A DV
Sbjct: 32 GRHISGPIRLCSGVTLSIEIGATLEFVPDYELYARNSVSVIAEGSNRAYIV-AQDAHDVA 90
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
I+G G + F + G + E RPR++ F C NV + +
Sbjct: 91 ISGKGKIVASGGAFNTGFD---------GAVGTYTPSERRPRVIVFEDCSNVRLEGFVIE 141
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H+VRC+ I M ++ + PN DGI I+ + ++ V I T DD IC KT
Sbjct: 142 DSPMWTVHLVRCNAVIINGMKVFNNRQLPNTDGIVIDSCVDVAVSEVVISTADDGICLKT 201
Query: 227 Y-----TGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVF 263
G N+ +D + + S A+K+G+ S+ D + + F
Sbjct: 202 SRSEHGIGHCQNIDVSDCVVESNSCALKIGTESFGDIRDVRF 243
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 29/230 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGAKGDG +T A +SAI G+ Q+ PPG++LT + L SH TL
Sbjct: 299 HSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTL 358
Query: 71 NIHEDATLLGG------PRIEDYPEESS-------RWYVVLAENATDVGITGG-GVVDGQ 116
+H+DA +LG P IE P + ++ N TDV ITGG G + GQ
Sbjct: 359 FVHKDAVILGAQDEAAYPLIEILPSYGAGRDGGGRHASLIFGTNLTDVVITGGNGTIHGQ 418
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W+ A + RP L+ + V + N+ L + W +H
Sbjct: 419 GQYW-------------WDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPT 465
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N I+ ++I +PN DGI+ + S N +I I +GDD I K+
Sbjct: 466 YSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKS 515
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 29/230 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FG GDG +T A ++AID + ++ PPG++LT + L SH TL
Sbjct: 47 HSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTL 106
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWY-VVLAENATDVGITGG-GVVDGQ 116
IH+DA +LG DYP + R+ ++ N TDV I GG G ++GQ
Sbjct: 107 YIHKDAVILGSQEESDYPHIPPLPSYGKGRDGGGRFSSLIFGTNLTDVVIIGGNGTINGQ 166
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
V W+ + RP L+ + V + N+ L + W +H V
Sbjct: 167 GR-------------VWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPV 213
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C + I+ M+I + PN DGI+ + N I I +GDD I K+
Sbjct: 214 YCSDVIIQGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKS 263
>gi|254469570|ref|ZP_05082975.1| polygalacturonase [Pseudovibrio sp. JE062]
gi|211961405|gb|EEA96600.1| polygalacturonase [Pseudovibrio sp. JE062]
Length = 461
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 26/259 (10%)
Query: 25 DGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRI 84
DG T A+Q AIDA QV P G++++ ++LKS V L++ L
Sbjct: 12 DGEKDITQAVQQAIDAVHAAGGG-QVVLPRGQWVSKALKLKSFVDLHLPTGCELSCSTDY 70
Query: 85 EDY--------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
DY E+S R ++ A + + I+G G + G + K+ + W
Sbjct: 71 ADYEAGKVSVIAEDSDRAFIT-ARDQQGISISGSGTIHGHSDKWCGRDGLFEGTF--WPK 127
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
RPR+V F C+++++ + + E W +H++ C + + I D PN
Sbjct: 128 M-------LRPRIVVFENCKDISLTGISIVEAPMWTIHLIACHQVKVESLRILNDMRMPN 180
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKT-------YTGPLYNLTATDSWIRTKSSAIK 249
DG++ + + I I DDA+C KT GP + ++S + +KS A+K
Sbjct: 181 TDGVNFDSCTDASIFNCVIRAADDAVCVKTCRKEDESLNGPAERIIVSNSILSSKSCALK 240
Query: 250 LGSASWFDFKALVFDNITI 268
+G+ ++ D + ++F TI
Sbjct: 241 IGTETYQDVRDVLFTTCTI 259
>gi|374331222|ref|YP_005081406.1| polygalacturonase [Pseudovibrio sp. FO-BEG1]
gi|359344010|gb|AEV37384.1| polygalacturonase [Pseudovibrio sp. FO-BEG1]
Length = 461
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 26/259 (10%)
Query: 25 DGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRI 84
DG T A+Q AIDA QV P G++++ ++LKS V L++ L
Sbjct: 12 DGEKDITQAVQQAIDAVHAAGGG-QVVLPRGQWVSKALKLKSFVDLHLPTGCELSCSTDY 70
Query: 85 EDY--------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
DY E+S R ++ A + + I+G G + G + K+ + W
Sbjct: 71 ADYEAGKVSVIAEDSDRAFIT-ARDQQGISISGSGTIHGHSDKWCGRDGLFEGTF--WPK 127
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
RPR+V F C+++++ + + E W +H++ C + + I D PN
Sbjct: 128 M-------LRPRIVVFENCKDISLTGISIVEAPMWTIHLIACHQVKVESLRILNDMRMPN 180
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKT-------YTGPLYNLTATDSWIRTKSSAIK 249
DG++ + + I I DDA+C KT GP + ++S + +KS A+K
Sbjct: 181 TDGVNFDSCTDASIFNCVIRAADDAVCVKTCRKEDESLNGPAERIIVSNSILSSKSCALK 240
Query: 250 LGSASWFDFKALVFDNITI 268
+G+ ++ D + ++F TI
Sbjct: 241 IGTETYQDVRDVLFTTCTI 259
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 29/270 (10%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ +++++D+GA DG T AI SAI+A V P G YLT I LKS++ L+
Sbjct: 1 MQLYNIVDYGAVQDGTTLATGAIASAIEAASNAGG-GTVFVPSGTYLTGAIFLKSNIELH 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF-V 121
+ ATL + DYP SRW + EN ++ +TG G +DG +
Sbjct: 60 VSPGATLSFSTELADYPVVESRWEGVQREVHASCIYGENLENISVTGSGTLDGNGQPWWQ 119
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+N + + RP+L+ F C+ V + +V L+ W ++ + C N
Sbjct: 120 KHRNHPEELQYP------------RPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNV 167
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLT 235
I ++SI ++PN DGI+ E +N I+ ID GDD I K T P N+T
Sbjct: 168 TIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIPCENIT 227
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
T+ + A+ LGS D + + N
Sbjct: 228 ITNCTMVHGHGAVVLGSEMSGDIRNVTISN 257
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 120/243 (49%), Gaps = 31/243 (12%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GAK DG DTAAIQ AI+ C P K V G +L+ + L+S +TL I + ATLL
Sbjct: 29 YGAKADGKTKDTAAIQKAIEICAP--KHGTVILKGGTFLSGPLTLRSDLTLEIDKGATLL 86
Query: 80 GGPRIEDYP-EESSRWYVVL---AENATDVGITGG----GVVDGQAMKFVVTKNEIKNVM 131
G I+DYP E ++W V A++ +++ +TGG G++DG F E+
Sbjct: 87 GSRDIDDYPLREDAKWRRVALLHADHVSNLRVTGGKTEGGIIDGSGDIFW----EMARTH 142
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD-----NTFIRDM 186
N T + SG RP LV +++ ++ L+ + L CD +T IR+
Sbjct: 143 RVPNDT-SGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRNP 201
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------YTGPLYNLTATDS 239
+ G PN DGID S N I+ V IDTGDD I K+ GP+ ++ DS
Sbjct: 202 AKTG----PNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDPKIGPVEHVYIHDS 257
Query: 240 WIR 242
R
Sbjct: 258 IFR 260
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 37/235 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FGA GDG +T A ++A+ Q+ P G +LT +I+L SH+TL
Sbjct: 3 HSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHLTL 62
Query: 71 NIHEDATLLGGPRIEDYP-----------------EESSRWYVVLAENATDVGITGG--G 111
+ +AT+LG ++DYP SS ++ E DV ITG G
Sbjct: 63 FLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSS---LINGEGLEDVVITGSDNG 119
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DGQ V W+ + D R LV + ++ + N+ R+ +W
Sbjct: 120 TIDGQGA-------------VWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFW 166
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V C N ++DM+I ++PN DGID + S+N I I G DAI K+
Sbjct: 167 TIHPVYCRNVVVKDMTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKS 221
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATI 62
L S H SV DFGA GDG +T A Q+A+ K Q+ P G +LT +
Sbjct: 43 LTASVERPHRASVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSF 102
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGIT 108
L SH+TL++ +DA +LG P D+P ++ N TDV IT
Sbjct: 103 SLISHLTLSLDKDAVILGSPDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIIT 162
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G VDGQ V W H + RP LV + V + N+
Sbjct: 163 GANGTVDGQGA-----------VWWDWFHNHTL--NYTRPPLVELMYSTRVVISNLTFIN 209
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C ++ ++I ++PN DGID + S N I + GDD I K+
Sbjct: 210 SPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYVRNGDDIIVIKS 268
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC----QVRFPPGEYLTATIRLKSHVTLN 71
SV +FGA GDG+ +TAA + A+ A + PPG +LT + L S TL
Sbjct: 78 SVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTSRFTLF 137
Query: 72 IHEDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQ 116
+H A +LG E++P E ++ L EN DV ITG G +DGQ
Sbjct: 138 LHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNGTIDGQ 197
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R L+ + NV + NV LR +W +H V
Sbjct: 198 GRMWW---------ELWWNRTL----NHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPV 244
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+D++I N PN DGID + S++ I I++GDD + K+
Sbjct: 245 YCRNVVIKDLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKS 294
>gi|118592173|ref|ZP_01549566.1| probable polygalacturonase protein [Stappia aggregata IAM 12614]
gi|118435145|gb|EAV41793.1| probable polygalacturonase protein [Labrenzia aggregata IAM 12614]
Length = 444
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 31/264 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
H ++ +GD TA +Q+A+D + ++ G Y T + L+S V L++ E
Sbjct: 3 HDIMFTSEEGDA----TARLQAALDQASESGQ--RLVLKAGVYQTGGLVLRSGVHLHLCE 56
Query: 75 DATL--------LGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L ++ E+S R +V A++ + ITG GV++ F+ E
Sbjct: 57 GAVLKPSGDYVAYASTTVDVIAEDSDRAMLV-AKDVKGIRITGKGVIEAPGADFIA--GE 113
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ +V H A RPR++ F GCR+V++ ++ +R W LH + C+ I +
Sbjct: 114 LDDV---GTHLPA----RLRPRVMVFDGCRDVHIEDITIRNSPMWTLHFIACEQVGIARV 166
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY-------TGPLYNLTATDS 239
+I D PN DGI I+ +N I I T DD I KT TGP ++
Sbjct: 167 TIENDRLMPNTDGIVIDSCSNVDIENTNIATADDGIVLKTTRRASGVPTGPCRSIRIRKC 226
Query: 240 WIRTKSSAIKLGSASWFDFKALVF 263
I ++S A+K+G+ S+ DFK + F
Sbjct: 227 RIESQSCALKIGTESFSDFKDIEF 250
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT +IQ+AI ACP G + V FP G YLT I LKS++T+ + +
Sbjct: 85 NVKDFGAVGDGKRLDTFSIQAAIMACPDGGR---VYFPEGVYLTYPIFLKSNITIELGKG 141
Query: 76 ATLLGGPRIEDYP--------EESSRWYVVLAENATD--------------VGITGGGVV 113
A LLG E YP +E Y+ E T+ V I G G++
Sbjct: 142 AVLLGAKGREMYPILPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNIIGDGII 201
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + F + K ++W RPR V C+NV + + ++ W +
Sbjct: 202 DGNS-SFDTWWQDAKVKRIAW-----------RPRTVYLNKCKNVLIEGITIKNSPSWTI 249
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H + N +++I + PN DG+D E + +I + GDD I K+
Sbjct: 250 HPLMSQNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKS 302
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 25/267 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DF DG DT A+Q AID ++ PP Y + ++ L S+ L++
Sbjct: 4 SLADFHPAADGETPDTQALQRAIDQIAEAGG-GRLTLPPVRYRSGSLNLPSNFELHLAAG 62
Query: 76 ATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMK-FVVTKNEI 127
A L+ + DY + E S ++ A ++ I+G G ++G A F V +E
Sbjct: 63 AVLIASRHLADYQQWKTLSSAEKSHNVLLYALGQRNLTISGKGRIEGDAEAWFAVEADEQ 122
Query: 128 KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMS 187
M + RPR++ F C V + + L + W +H+V C + I ++
Sbjct: 123 GYRMPRAD----------RPRMIVFEDCEQVTLKDFTLFQAPMWTVHLVSCRHVHIDHLT 172
Query: 188 IYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSWI 241
I PN D +DI+ +I+ DDAIC P + P + ++ +
Sbjct: 173 IDNAMTLPNTDALDIDSCEAVLISNSYFSAADDAICIKTTLKPGSLRRPARRIAISNCLL 232
Query: 242 RTKSSAIKLGSASWFDFKALVFDNITI 268
R+ S AIK+G+ +W D + + +I
Sbjct: 233 RSDSCAIKIGTETWDDVEDITVTGCSI 259
>gi|9437307|emb|CAB99320.1| exo-poly-a-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 124/290 (42%), Gaps = 54/290 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ ++ +GAKGDG +T AIQ AIDAC G C+V P G + T + LKS +TLN+
Sbjct: 150 QVINITQYGAKGDGTTLNTTAIQKAIDACQTG---CRVDIPAGVFKTGALWLKSDMTLNL 206
Query: 73 HEDATLLGGPRIEDYPEE------SSRWYVVLAENATD-----------VGITGGGVVDG 115
+ ATLLG DYPE SS+ NA D + I G GV+DG
Sbjct: 207 LQGATLLGSDNAADYPEAYKIYSYSSQVRPASLINAIDKTTSAVGTFKNIRIIGKGVIDG 266
Query: 116 QAMKFVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRL 149
K K+E+ N + + N A + R L
Sbjct: 267 NGWKRSADAKDELGNSLPQYVKSDSSKVSKDGILAKNQVAAAVAKGMDTKTAYSQRRSSL 326
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
V G +NV + +V +R PA + + N + + I+ F+ N DG++ +S N +
Sbjct: 327 VTLRGVKNVYIADVTIRNPANHGVMFLESQNV-VENGVIHQTFDANNGDGVEFGNSQNIM 385
Query: 210 ITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+ DTGDD+I G P N +++ R A+ +GS
Sbjct: 386 VFNSVFDTGDDSINFAAGMGQDAQSQEPSQNAWLFNNYFRRGHGAVVMGS 435
>gi|224537469|ref|ZP_03678008.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520907|gb|EEF90012.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
Length = 469
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 23/269 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKSHVTLNI 72
I++++D+GAKGDG+ D AAIQ+AID C V P G ++ + L S V L++
Sbjct: 28 IYNIMDYGAKGDGVTDDAAAIQAAIDQCSKSGGG-MVLVPAGRTFMCSPFHLASFVELHL 86
Query: 73 HEDATLLGGP--------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
++ LL P D E W + ++ +V ITG G +DG + F+
Sbjct: 87 EPNSCLLANPDEAAYTLSAFRDNRGEGMMW--IHGQDLKEVSITGTGAIDGNGVSFMG-- 142
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K + S+ D RP ++ + + +V +R AYW +H++ C++ I
Sbjct: 143 ---KELEDSYELKPVTDFDP-RPHVLTLINIEKTVIRDVTIRNSAYWTVHLIGCNDVSID 198
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-----GPLYNLTATDS 239
+SI + N DGID++ S N I I++GDD IC K G ++ T+
Sbjct: 199 GISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYGSCEDIVVTNC 258
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ ++S AIK+GS + ++F+N I
Sbjct: 259 TMVSRSCAIKIGSENMDKINNVLFNNCII 287
>gi|424883833|ref|ZP_18307461.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392515494|gb|EIW40227.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 454
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
DT +QSAID ++ G ++ ++LKS V L++ A L P E Y
Sbjct: 16 DTVRLQSAIDGLSASGGG-RLELMAGIHVCRGLQLKSGVDLHLAAGAILRPVPDYEAYAH 74
Query: 89 -------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A A + +TG G ++ F+V +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-ASGARRISLTGAGRIEAGCDSFIVGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V F GC + + +V + W LH+V C + +R+++I + PN DGI
Sbjct: 127 --EFRPRVVVFEGCDEIEISSVHISRSPMWTLHLVNCTDVAVRNVTIDNNRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI +I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCRISTADDGICLKTSIGPDRVAIGRCENILVRRCSVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D +VF++ ++
Sbjct: 245 HGDVTNVVFEDCSV 258
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 27/250 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
T AIQ ID ++ F G Y T + LKS++ L++ ATL+ +DYP
Sbjct: 18 TEAIQEKIDELHQQGGG-RITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYPVV 76
Query: 91 SSRWYVV---------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
SRW V AENA ++ +TG G++DGQ ++ T E + +
Sbjct: 77 VSRWEGVKREVYASCLYAENAENIAVTGLGMLDGQGQRWWKTFRENREQLAY-------- 128
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP+L+ F C+ + + ++RL + W ++ + C N I ++ I ++PN DGID
Sbjct: 129 ---PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGID 185
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKLGSASW 255
E N I+ ID GDD I K+ T N+T + + A+ LGS
Sbjct: 186 PESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGHGAVVLGSEMS 245
Query: 256 FDFKALVFDN 265
D + + N
Sbjct: 246 GDIRNVTISN 255
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 560 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 619
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 620 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 679
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 680 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 737
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 738 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 797
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 798 CNGLCIGSEMSGGVENIYMDNIQI 821
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S L++
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIAAAGGGR---LTLPAGRYRSGCLNLPSDFELHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ PR+ DY E S ++ A ++ I+G G +DG+ + + +
Sbjct: 61 AGAVLIASPRLADYQAVQALSCAEKSHNVLLYALGQRNITISGTGRIDGEGEAWFAAERD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + W +H+V C + I +
Sbjct: 121 EQGYRLPRPD---------RPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ + DDAIC P P + T+
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKTTHKPAALRRPARQIMITNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ +W D + + TI
Sbjct: 232 LRSYSCAFKIGTETWDDVEDVTVTGCTI 259
>gi|325970193|ref|YP_004246384.1| glycoside hydrolase family protein [Sphaerochaeta globus str.
Buddy]
gi|324025431|gb|ADY12190.1| glycoside hydrolase family 28 [Sphaerochaeta globus str. Buddy]
Length = 437
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 15/223 (6%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGA GDG +T AIQ+AID + V G YL+ + LK + L I + ATLL
Sbjct: 29 FGAIGDGRTLNTLAIQAAID--EAATQQAVVVVADGIYLSGALFLKQGMALEIRKGATLL 86
Query: 80 GGPRIEDYPEESSRWYVVL---------AENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
G P + DYP + +R+ L + +DV + G G +DG F + +
Sbjct: 87 GSPNLADYPIQQTRFEGRLCTWPVGFLNGMHLSDVKVYGEGTLDGNGFPFWEQFWDARQA 146
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI-- 188
++ N + D RPRL F C +++ + L+ A+W LH+ N I+ ++I
Sbjct: 147 AIASN-AAFSNRDIMRPRLCYFEDCDRIHLEGLTLQNSAFWNLHLYLSHNITIKALTIQA 205
Query: 189 -YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+ ++D IDI+ +N I+ T DD +C K GP
Sbjct: 206 PHEGVRAASSDAIDIDACSNVTISDCTFSTDDDCVCIKGGKGP 248
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 35/254 (13%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
T IQ AID N +V P GE+LT + LK ++ L++ A L + EDYP
Sbjct: 18 TEGIQKAIDEAYQ-NGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQEDYPVV 76
Query: 91 SSRWYVV---------LAENATDVGITGGGVVDGQAMK----FVVTKNEIKNVMVSWNHT 137
+SRW V AE A ++ +TG G +DG M+ F + E+K
Sbjct: 77 TSRWEGVKRKVYASCLFAEGARNIAVTGFGTIDGNGMEWWDVFRNRREELKYP------- 129
Query: 138 GACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNN 197
RP+L+ F C ++ + +VRL W ++ + C + + ++SI ++PN
Sbjct: 130 --------RPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNT 181
Query: 198 DGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKLG 251
DGID E N I+ ID GDD I K+ T N+T T+ + A+ G
Sbjct: 182 DGIDPESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVACENITITNCTMVHGHGAVVFG 241
Query: 252 SASWFDFKALVFDN 265
S D + + N
Sbjct: 242 SEMSGDIRNVTISN 255
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 37/246 (15%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ D+GA DG +T A + AI C N +V P G+YLT I L+S+V L++ +
Sbjct: 58 YNIKDYGAVADGTTLNTGAFEKAIKECAE-NGGGKVIVPNGKYLTGAIHLESNVNLHLDD 116
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA-------- 117
+A +L +DYP E + +V A+N T+V ITG G ++GQA
Sbjct: 117 NAEILFSTNPKDYPIVHTSFEGTEVMNYSPLVYAKNKTNVAITGKGTLNGQANSSNWWVW 176
Query: 118 --------MKFVVTKNEIKN--VMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNV 160
K ++N+ N V+V G G RP + F C V +
Sbjct: 177 SGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRPNFIEFFECNTVLI 236
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
++++ +W LH ++ +N I +++ + + PNNDG D E S N +I +TGDD
Sbjct: 237 KDIKIINAPFWILHPMKSNNIIIDGVTV--NSHGPNNDGCDPEYSQNIIIKNCVFNTGDD 294
Query: 221 AICPKT 226
I K+
Sbjct: 295 CIAIKS 300
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 21/223 (9%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA+ +T AIQ+AID+C V+F PG YL+ +I LK +V L++ ++ TL
Sbjct: 58 DFGAQSKVGFTNTKAIQTAIDSCAASGGGI-VKFRPGTYLSGSIFLKDNVQLHLDKEVTL 116
Query: 79 LGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQA-----MKFVVTK 124
LG I DY E ++R W L A + +V I+G G +DGQ M + + K
Sbjct: 117 LGSQNILDYKEIATRVAGIEMEWPAALVNAIDTQNVLISGEGTIDGQGKVFWDMYWDMRK 176
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
N+ + + W D RPR V +NV V ++ L+ +W + I+ +
Sbjct: 177 NDYEPKGLRW----IVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKHVTTD 232
Query: 185 DMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
++I + + P+ DGIDI+ S+ ++ ID DD C K
Sbjct: 233 GLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLK 275
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 558 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 617
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 618 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 677
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 678 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 735
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 795
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 796 CNGLCIGSEMSGGVENIYMDNIQI 819
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S L++
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIAAAGGGR---LTLPAGRYRSGCLNLPSDFELHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ PR+ DY E S ++ A ++ I+G G +DG+ + + +
Sbjct: 61 AGAVLIASPRLADYQAVQALSCAEKSHNVLLYALGQRNITISGTGRIDGEGEAWFAAERD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + W +H+V C + I +
Sbjct: 121 EQGYRLPRPD---------RPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ + DDAIC P P + T+
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKTTHKPAALRRPARQIMITNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ +W D + + TI
Sbjct: 232 LRSYSCAFKIGTETWDDVEDVTVTGCTI 259
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 27/250 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
T AIQ ID ++ F G Y T + LKS++ L++ ATL+ +DYP
Sbjct: 18 TEAIQEKIDELHQQGGG-RITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYPVV 76
Query: 91 SSRWYVV---------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
SRW V AENA ++ +TG G++DGQ ++ T E + +
Sbjct: 77 VSRWEGVKREVYASCLYAENAENIAVTGLGMLDGQGQRWWKTFRENREQLAY-------- 128
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP+L+ F C+ + + ++RL + W ++ + C N I ++ I ++PN DGID
Sbjct: 129 ---PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGID 185
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKLGSASW 255
E N I+ ID GDD I K+ T N+T + + A+ LGS
Sbjct: 186 PESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGHGAVVLGSEMS 245
Query: 256 FDFKALVFDN 265
D + + N
Sbjct: 246 GDIRNVTISN 255
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 558 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 617
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 618 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 677
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 678 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 735
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 795
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 796 CNGLCIGSEMSGGVENIYMDNIQI 819
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DT +Q AID A G + + PPG Y + + L S L++
Sbjct: 4 SLGDFHPVADGETPDTRILQQAIDQIAAAGGGR---LTLPPGRYRSGCLNLPSDFELHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ + DY + E S ++ A ++ ITG G ++G A + + +
Sbjct: 61 AGAVLVASRHLADYQQWKALSCAEKSHNVLLYALGQRNLTITGQGHIEGDAEAWFAAEPD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ V RPR++ F C V + ++ L W +H+V C + I +
Sbjct: 121 EQGYRVP---------KADRPRMIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHVHIERL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------YTGPLYNLTATDSW 240
+I PN D +DI+ I+ DDAIC KT P + ++
Sbjct: 172 TIDNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLRRPARRIAVSNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A+K+G+ +W D + + T+
Sbjct: 232 LRSDSCALKIGTETWDDIEDITVSGCTL 259
>gi|365834727|ref|ZP_09376169.1| polygalacturonase [Hafnia alvei ATCC 51873]
gi|364568558|gb|EHM46199.1| polygalacturonase [Hafnia alvei ATCC 51873]
Length = 444
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 23/266 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ F DGI DT Q A+D + + G Y+ + L S+ L++
Sbjct: 4 AISQFSPAADGITRDTQKFQHALDLIS-AHGGGTLYVDSGRYMLGGLLLGSNTCLHLEAG 62
Query: 76 ATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
A L+ +D+ + E S + A NA ++ I+G G + G A + K
Sbjct: 63 AELIVSDNYQDFAQARTHSSAECSDRAFLYALNAQNITISGSGKIFGSADAYFSAKP--- 119
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
N G E RPR++ F GC+NV + + W +H+V C+N I ++++
Sbjct: 120 ------NEQGYRIPLEQRPRIIVFEGCQNVQLREFTIEHAPMWTIHLVSCNNVKISELTV 173
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSWIR 242
D N D +DI+ IT DDAIC KT P + + ++ ++
Sbjct: 174 QNDLTMANTDALDIDSCQLVHITNSLFSAADDAICLKTTRKPEFLQQPARQIVISNCTLQ 233
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
+KS A+K+G+ ++ D + + N I
Sbjct: 234 SKSCALKIGTETFADIEDVSVSNCAI 259
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 46/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG+ D+ IQ+A++ACP K V P G YL + LKS++ L I +D
Sbjct: 84 NVKDFGAAGDGVKIDSVCIQAAVNACP---KDGTVYIPKGRYLCTPVFLKSNIDLWIDKD 140
Query: 76 ATLLGGPRIEDYP---------EESSRWYV--------------VLAENATDVGITGGGV 112
A L+G + YP +E + + + + + +V I G G+
Sbjct: 141 AVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYGEGI 200
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A M+ W RP V C+N+ + + + W
Sbjct: 201 LDGNAG------------MLDWWKDAKKKNIAWRPNTVFLHNCKNIAMQGLCIMNSPSWT 248
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
LH DN + +I N+PN DG+D E N +I I GDD I K+
Sbjct: 249 LHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMA 308
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P N+ +S R ++ +GS
Sbjct: 309 LRHYKPAKNIVIRNSIFRKGHGSVTIGS 336
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 558 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 617
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 618 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 677
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 678 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 735
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 795
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 796 CNGLCIGSEMSGGVENIYMDNIQI 819
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 541 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 600
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 601 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 660
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 661 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 718
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 719 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 778
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 779 CNGLCIGSEMSGGVENIYMDNIQI 802
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S L++
Sbjct: 5 SLADFHPVADGETPDTAVLQRAMDQIAAAGGGR---LTLPAGRYRSGCLNLPSDFELHLE 61
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ PR+ DY E S ++ A ++ I+G G +DG+ + + +
Sbjct: 62 AGAVLIASPRLADYQAVQALSCAEKSHNVLLYALGQRNIIISGTGRIDGEGEAWFAAERD 121
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + W +H+V C + I +
Sbjct: 122 EQGYRLPRAD---------RPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 172
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ + DDAIC P P + T+
Sbjct: 173 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALRRPARQIMITNCL 232
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ +W D + + TI
Sbjct: 233 LRSYSCAFKIGTETWDDVEDVTVTGCTI 260
>gi|307133005|ref|YP_003885021.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530534|gb|ADN00465.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 606
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 55/297 (18%)
Query: 7 LSTTHI-HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLK 65
++TT + I + +GAKG+G +T+AIQ AIDACP G CQV P G + T + LK
Sbjct: 145 ITTTAVPQIIDITRYGAKGNGTTLNTSAIQKAIDACPSG---CQVNVPAGVFKTGALWLK 201
Query: 66 SHVTLNIHEDATLLGGPRIEDYP------EESSRWYVVLAENATD-----------VGIT 108
S++TLN+ ATLLG DYP + S+ N TD + IT
Sbjct: 202 SNMTLNLSPGATLLGSENAADYPGGYTIGKSSTDMRPASLLNVTDKTSSKGGVFQNIRIT 261
Query: 109 GGGVVDGQAMKFVVT-KNEIKNVMVSW--------NHTGACSGDEC-------------- 145
G G +DG K ++E+ N + + N+ G + ++
Sbjct: 262 GKGAIDGSGWKRSADGQDELGNKLPQYVKSDNANVNNDGILAKNQVAAARAKGIDLKTAY 321
Query: 146 ---RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
R L+ G NV + ++ +R PA + ++ N I + I+ F+ N DG++
Sbjct: 322 RQYRSSLITLRGANNVYIADITIRNPADHGIVFMKSQNV-IENGVIHQTFDANNGDGVEF 380
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+S + + DTGDD I G P N +++ R AI +GS
Sbjct: 381 SNSQDITVLNSVFDTGDDCINFAAGLGQEGQKQSPTQNARLFNNYFRHGHGAIVMGS 437
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESS 92
IQ AID+C + YL + LKS V L++ +DA LL + +D+ PE +
Sbjct: 558 IQRAIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDFLPEVWT 617
Query: 93 RWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK-----------NVMV 132
RW ++ A++AT++ ITG G +D Q + + ++I+ ++
Sbjct: 618 RWEGTELYGHSPMIYAKHATNIAITGQGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLI 677
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
G RP + F+GC + V + ++ +W +H V CDN +R ++I D
Sbjct: 678 PVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DS 735
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTK 244
+ PNNDG D E ++N +I TGDDAI K P N+ + +++
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSE 795
Query: 245 SSAIKLGSASWFDFKALVFDNITI 268
+ + +GS + + DNI I
Sbjct: 796 CNGLCIGSEMSGGVENIYMDNIQI 819
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FGAKGDG +T A ++A++ + Q+ PPG +LT + L SH TL
Sbjct: 9 HSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHFTL 68
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+H+ A LL ++YP + R+ ++ N TDV ITG G +DG
Sbjct: 69 YLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGANGTIDG 128
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + + RP ++ + V + N+ L W +H
Sbjct: 129 QGESW-------------WKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHP 175
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLY 232
V C + IR ++I ++PN DGID + +N I I +GDD I K+ G +
Sbjct: 176 VYCRDVIIRGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRF 235
Query: 233 NLTATDSWIR------TKSSAIKLGS 252
N+ D IR S+ I LGS
Sbjct: 236 NMPTQDVVIRHLTCISPTSATIALGS 261
>gi|436835773|ref|YP_007320989.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384067186|emb|CCH00396.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 505
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 38/288 (13%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
V L L+ ++ +S+ DFGAK D +T AIQ AID C N +V P G + T
Sbjct: 17 VCLSLMATSVLGQSYSIRDFGAKTDSTFLNTKAIQKAIDKC-HANGGGEVVVPAGTFYTG 75
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDYPEE---SSRWY---------------VVLAENA 102
TI LKS+V L++ A L G DYPE +++ + +V+A+ A
Sbjct: 76 TIFLKSNVYLHLMPGAVLQGSYNPADYPEHDILAAKKFGTITHNGLYLTYMKALVIADKA 135
Query: 103 TDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
T GI G G + G E K + N G +P+ + F+GC++V +
Sbjct: 136 THTGIIGLGTLRGPG--------EGKAFQLGLNKDG-------KPKNIFFIGCQDVLLEG 180
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+R+ A + I C+ I + ++ N N DG+DI D + +I ID+ DDA+
Sbjct: 181 IRILNSAQITVSISGCERVTINRIYLHSWVNW-NCDGLDI-DGKDVIIANSIIDSEDDAL 238
Query: 223 CPKT-YTGPL-YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
C K+ Y N+T T+ + + + IK G+ S F+ + N I
Sbjct: 239 CFKSEYLAKFCENITVTNCVLSSICNGIKFGTGSRSGFRNITVTNCII 286
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 46/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG+ D+ IQ+AI+ACP K V P G+YL + LKS++ L I +D
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACP---KDGTVYIPKGKYLCTPVFLKSNIDLWIDKD 140
Query: 76 ATLLGGPRIEDYP---------EESSRWYV--------------VLAENATDVGITGGGV 112
A L+G + YP +E+ + + + + +V I G G+
Sbjct: 141 AILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGEGI 200
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A M+ W RP V C+N+ + + + W
Sbjct: 201 LDGNAG------------MLDWWKDAKKKNIAWRPNTVFLYNCKNIAMQGLCIMNSPSWT 248
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
LH DN + +I N+PN DG+D E N +I I GDD + K+
Sbjct: 249 LHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P N+ +S R ++ +GS
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGS 336
>gi|294053995|ref|YP_003547653.1| glycoside hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293613328|gb|ADE53483.1| glycoside hydrolase family 28 [Coraliomargarita akajimensis DSM
45221]
Length = 488
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L L + +++D+GAK + D AIQ+AIDAC + +V P G Y T T+
Sbjct: 15 LTSLAQAAEDKVFNILDYGAKPWVLSTD--AIQAAIDACHEAGEG-RVVLPKGNYKTGTL 71
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPE----------ESSRWYVVLAENATDVGITGGGV 112
LKS+V L+ + TL G ++DY + +YV AEN T G V
Sbjct: 72 FLKSNVHLDFEDGVTLYGSSDLKDYADVPVATEEPHFSKCLFYVRGAENITITG-QDTSV 130
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
++GQ F H+ RP+L +N+ N+ ++ WC
Sbjct: 131 INGQGYFF--------------KHSPE------RPKLFRIEQSKNIRFENITVKNSGSWC 170
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-PL 231
++ CDN + +S+Y N NNDG++ + +N I + DDAIC K+ P
Sbjct: 171 IYFGECDNIRMTRVSVYNKENH-NNDGMNYDGCSNVWIKDCNLQVEDDAICLKSSVARPC 229
Query: 232 YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
N+ + + +A KLG+AS + FK + N
Sbjct: 230 ENINIEGCTVSSYHAAFKLGTASGWTFKDISIKN 263
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++++ GA+ GI T A +AID + P G +LT I L+SH+ L++
Sbjct: 20 NLLEHGAQEGGIQSCTTAFANAIDTLA-AQGGGTLTVPAGRWLTGPICLRSHIRLHLETG 78
Query: 76 ATLLGGPRIEDY--PEESSR---WY-----VVLAENATDVGITGGGVVDGQAMKFVV-TK 124
A ++ DY P + R W ++ A +AT + ITG G DGQ + K
Sbjct: 79 AHVVFSREHADYQPPVLAHRAGCWVMNFHPLLYARDATHIAITGRGTFDGQGDAWWEWKK 138
Query: 125 NE----------IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
NE + V ++ G + D RP ++ F+ CR+V + NV LR+ + +H
Sbjct: 139 NEDGVRRLIDMVARRVPIAERIFGTVA-DCVRPNMLEFINCRDVLIENVTLRDSPAYLVH 197
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C+N +R +SI G N PNNDGID E N +I +DTGDD IC K+
Sbjct: 198 PVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTGDDCICLKS 247
>gi|374374710|ref|ZP_09632368.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231550|gb|EHP51345.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 550
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 25/252 (9%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ I++V FGAKGDG DT AIQ+AID C NK V FPPG +++ T++LKS+VTL
Sbjct: 40 VGIYNVKAFGAKGDGKTLDTKAIQTAIDTCNR-NKGGTVFFPPGIFVSGTLQLKSNVTLY 98
Query: 72 IHEDATLLGGPRIEDY------PEESSRWYV------VLAENATDVGITGGGVVDGQAMK 119
+ ATLLG + Y P V + A NA ++GI G G +DG +
Sbjct: 99 LSAQATLLGTTDGKQYFAAAEIPLHGDSTLVDGNVGLLYAVNAENIGIEGMGTIDGNGAQ 158
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
F ++ K +GA RP + F C NV V ++ L++ AY + +++ +
Sbjct: 159 F---RSPSKGAPSPAGISGA-----QRPYHILFYKCTNVQVNDIFLKDSAYHSIRMIQSE 210
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDS 239
+ I G NNDG + + T DDA G +T +DS
Sbjct: 211 YLKFSGLRIKGRV-IHNNDGFHFISCRYVHVHACDVRTQDDACA---LFGSCQYVTVSDS 266
Query: 240 WIRTKSSAIKLG 251
T+ S + G
Sbjct: 267 TFSTRWSVFRFG 278
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLN 71
I S++DFG GDG +T + Q AI G Q+ P G +LT + L S TL
Sbjct: 75 IKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDFTLF 134
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+H A +LG I+++P ++ A +V ITG G VDGQ
Sbjct: 135 LHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQ 194
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T R L+ + NV V N+ R +W +H V
Sbjct: 195 GRMWW---------ELWWNRTLV----HTRGHLLELMNSENVLVSNLTFRNSPFWTIHPV 241
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+ M+I N PN DGID + S N I I++GDD + K+
Sbjct: 242 YCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKS 291
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGA GDG+ +T A + A+ A + Q+ PPG++LTA L SH+TL +
Sbjct: 78 NLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHMTLFLA 137
Query: 74 EDATLLGGPRIEDY----PEESSRWY-----------VVLAENATDVGITG-GGVVDGQA 117
EDA +L G + E+Y P S Y ++ +N D+ ITG G +DGQ
Sbjct: 138 EDAVIL-GIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTIDGQG 196
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ W + R LV + ++ N+ LR +W LH
Sbjct: 197 QTW-------------WKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYD 243
Query: 178 CDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YT 228
C N IR+++I F PN DGID + + VI I GDDAI K+ Y
Sbjct: 244 CKNVTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 303
Query: 229 GPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA I +GS ++ +N+ +
Sbjct: 304 RPSTNILIRNLVVRSMVSAGISIGSEMSGGVSSVTVENLLV 344
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV +FGA GDG+ +TAA + A+ A G ++ PPG ++T + L S TL +H
Sbjct: 81 SVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRFTLFLH 140
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQAM 118
A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 141 HGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGR 200
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R L+ + N+ + N+ LR +W +H V C
Sbjct: 201 IWW---------DLWWNRTL----NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYC 247
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR++++ N PN DGID + S+ I I++GDD + K+
Sbjct: 248 RNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 295
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV +FGA GDG+ +TAA + A+ A G ++ PPG ++T + L S TL +H
Sbjct: 81 SVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRFTLFLH 140
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQAM 118
A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 141 HGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGR 200
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R L+ + N+ + N+ LR +W +H V C
Sbjct: 201 IWW---------DLWWNRTL----NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYC 247
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR++++ N PN DGID + S+ I I++GDD + K+
Sbjct: 248 RNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 295
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV +FGA GDG+ +TAA + A+ A G ++ PPG ++T + L S TL +H
Sbjct: 81 SVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRFTLFLH 140
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQAM 118
A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 141 HGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGR 200
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R L+ + N+ + N+ LR +W +H V C
Sbjct: 201 IWW---------DLWWNRTL----NHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYC 247
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR++++ N PN DGID + S+ I I++GDD + K+
Sbjct: 248 RNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 295
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 128/295 (43%), Gaps = 49/295 (16%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIR 63
L + TH + GA GI T I AID A G + FP G YLTATIR
Sbjct: 15 LSTAVTHARTFDMKRLGADLTGIKPCTDLINRAIDEAAAEGGG--TIYFPAGTYLTATIR 72
Query: 64 LKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVV 113
+KS++TL+I ATL R EDY P RW ++ A+NA ++ ITG G +
Sbjct: 73 MKSNITLDIESGATLRFSDRFEDYLPFVKIRWEGTVMNTLSPLIYADNADNLTITGRGTL 132
Query: 114 DGQAMKF----VVTKNEI---------------------KNVMVSWNHTGACSGDECRPR 148
DG K+ V T+ I K++ +S + + RP
Sbjct: 133 DGNGFKWWAWEVDTRRLIKENGGKLPSLNKLQQMWVDANKDLEISDYYKPSLERRMFRPP 192
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG---DFNTPNNDGIDIEDS 205
+ F C N+ + NV++ +W ++ CDN + ++I + PN DGI+
Sbjct: 193 FIQFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSC 252
Query: 206 NNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
+N I+ I GDD I K+ Y P NLT T+ + + + +GS
Sbjct: 253 SNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGHGGVVIGS 307
>gi|9437306|emb|CAB99319.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 124/290 (42%), Gaps = 54/290 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ ++ ++GAKGDG +T AIQ AIDACP G C+V P G + T + LKS +TLN+
Sbjct: 152 QVINITEYGAKGDGTTLNTTAIQKAIDACPTG---CRVDIPAGVFKTGALWLKSDMTLNL 208
Query: 73 HEDATLLGGPRIEDYPEE------SSRWYVVLAENATD-----------VGITGGGVVDG 115
+ ATLLG DYP+ SS+ NA D + I G G +DG
Sbjct: 209 LQGATLLGSDTAADYPDAYKLYSYSSQVRPASLINAIDKTSSAAGTFKNIRIIGKGAIDG 268
Query: 116 QAMKFVVT-KNEIKNVMVSW----------------NHTGACSG---------DECRPRL 149
K K+E+ N + + N A + R L
Sbjct: 269 NGWKRSADGKDELGNSLPQYVKSDSSKVSNDGILAKNQVAAAVAKGIDIKLAYSQLRSSL 328
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
V G +N + +V +R PA + + N + + I+ F+ N DG++ +S N +
Sbjct: 329 VTLRGVKNAYIADVTIRNPANHGIIFLESRNV-VENSVIHQTFDANNGDGVEFINSQNIM 387
Query: 210 ITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+ DTGDD+I G P N +++ R A+ +GS
Sbjct: 388 VFNSVFDTGDDSINFGAGLGQDAQKQEPSQNAQLFNNYFRHGHGAVVMGS 437
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRL 64
L+ H ++ +FGA GDG+ +T A Q+AI ++ P G +LT + L
Sbjct: 35 LAVIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDL 94
Query: 65 KSHVTLNIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG- 109
SH+TL + +DA +LG +D+P E R + ++ N TDV ITG
Sbjct: 95 ISHLTLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGD 154
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DGQ + W+ + + RP LV F+ V + N+
Sbjct: 155 NGTIDGQGS-------------IWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSP 201
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK---- 225
+W +H V C +++++I ++PN DGID + S++ + + TGDD I K
Sbjct: 202 FWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWD 261
Query: 226 ----TYTGPLYNLTATDSWIRTKSSAIKLGS 252
+Y P N+T +T S+ I +GS
Sbjct: 262 EYGMSYGRPSKNITIRRLVGQTTSAGIAIGS 292
>gi|307133006|ref|YP_003885022.1| polygalacturonase [Dickeya dadantii 3937]
gi|306530535|gb|ADN00466.1| polygalacturonase [Dickeya dadantii 3937]
Length = 606
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 124/290 (42%), Gaps = 54/290 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ ++ ++GAKGDG +T AIQ AIDACP G C+V P G + T + LKS +TLN+
Sbjct: 152 QVINITEYGAKGDGTTLNTTAIQKAIDACPTG---CRVDIPAGVFKTGALWLKSDMTLNL 208
Query: 73 HEDATLLGGPRIEDYPEE------SSRWYVVLAENATD-----------VGITGGGVVDG 115
+ ATLLG DYP+ SS+ NA D + I G G +DG
Sbjct: 209 LQGATLLGSDTAADYPDAYKLYSYSSQVRPASLINAIDKTSSAAGTFKNIRIIGKGAIDG 268
Query: 116 QAMKFVVT-KNEIKNVMVSW----------------NHTGACSG---------DECRPRL 149
K K+E+ N + + N A + R L
Sbjct: 269 NGWKRSADGKDELGNSLPQYVKSDSSKVSNDGILAKNQVAAAVAKGIDIKLAYSQLRSSL 328
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
V G +N + +V +R PA + + N + + I+ F+ N DG++ +S N +
Sbjct: 329 VTLRGVKNAYIADVTIRNPANHGIIFLESRNV-VENSVIHQTFDANNGDGVEFINSQNIM 387
Query: 210 ITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+ DTGDD+I G P N +++ R A+ +GS
Sbjct: 388 VFNSVFDTGDDSINFGAGLGQDAQKQEPSQNAQLFNNYFRHGHGAVVMGS 437
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYAFCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S + L++
Sbjct: 4 SLADFHPAADGETPDTAVLQRALDQIAAAGGGR---LTLPAGRYRSGCLNLPSDIELHLD 60
Query: 74 EDATLLGGPRIEDYP-------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ ++ DY E S ++ A ++ ++G G +DG+ + + +
Sbjct: 61 AGAVLIASQQLADYQTVQALSCAEKSHNVLLYALGQRNITLSGTGRIDGEGDAWFAAERD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPRL+ F C V + L + W +H+V C + I +
Sbjct: 121 AQGYRLPHAD---------RPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ DDAIC P P + T+
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKTTHKPAALRRPARQIMITNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A+K+G+ +W D + + TI
Sbjct: 232 LRSYSCALKIGTETWDDVEDVTVTGCTI 259
>gi|9437305|emb|CAB99318.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 55/297 (18%)
Query: 7 LSTTHI-HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLK 65
++TT + I + +GAKG+G +T+AIQ AIDACP G CQV P G + T + LK
Sbjct: 145 ITTTAVPQIIDITRYGAKGNGTTLNTSAIQKAIDACPSG---CQVNVPAGVFKTGALWLK 201
Query: 66 SHVTLNIHEDATLLGGPRIEDYP------EESSRWYVVLAENATD-----------VGIT 108
S++TLN+ ATLLG DYP + S+ N TD + IT
Sbjct: 202 SNMTLNLSPGATLLGSENAADYPGGYTIGKSSTDMRPASLLNVTDKTSSKGGVFQNIRIT 261
Query: 109 GGGVVDGQAMKFVVT-KNEIKNVMVSW--------NHTGACSGDEC-------------- 145
G G +DG K ++E+ N + + N+ G + ++
Sbjct: 262 GKGAIDGSGWKRSADGQDELGNKLPQYVKSDNANVNNDGILAKNQVAAARAKGIDLKTAY 321
Query: 146 ---RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
R L+ G NV + ++ +R PA + ++ N I + I+ F+ N DG++
Sbjct: 322 RQYRSSLITLRGANNVYIADITIRNPADHGIVFMKSQNV-IENGVIHQTFDANNGDGVEF 380
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+S + + DTGDD I G P N +++ R AI +GS
Sbjct: 381 SNSPDITVLNSVFDTGDDCINFAAGLGQEGQKQSPTQNARLFNNYFRHGHGAIVMGS 437
>gi|307133007|ref|YP_003885023.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530536|gb|ADN00467.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 602
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 124/290 (42%), Gaps = 54/290 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ ++ +GAKGDG +T AIQ AIDAC G C+V P G + T + LKS +TLN+
Sbjct: 150 QVINITQYGAKGDGTTLNTTAIQKAIDACQTG---CRVDIPAGVFKTGALWLKSDMTLNL 206
Query: 73 HEDATLLGGPRIEDYPEE------SSRWYVVLAENATD-----------VGITGGGVVDG 115
+ ATLLG DYP+ SS+ NA D + I G GV+DG
Sbjct: 207 LQGATLLGSDNAADYPDAYKIYSYSSQVRPASLINAIDKTSSAVGTFKNIRIIGKGVIDG 266
Query: 116 QAMKFVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRL 149
K K+E+ N + + N A + R L
Sbjct: 267 NGWKRSADAKDELGNSLPQYVKSDSSKVSKDGILAKNQVAAAVAKGMDTKTAYSQRRSSL 326
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
V G +NV + +V +R PA + + N + + I+ F+ N DG++ +S N +
Sbjct: 327 VTLRGVKNVYIADVTIRNPANHGVMFLESQNV-VENGVIHQTFDANNGDGVEFGNSQNIM 385
Query: 210 ITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
+ DTGDD+I G P N +++ R A+ +GS
Sbjct: 386 VFNSVFDTGDDSINFAAGMGQDAQSQEPSQNAWLFNNYFRRGHGAVVMGS 435
>gi|116249351|ref|YP_765192.1| polygalacturonase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254001|emb|CAK12397.1| putative polygalacturonase [Rhizobium leguminosarum bv. viciae
3841]
Length = 454
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 28/261 (10%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGG 81
A+GD DT +Q+ ID +V G ++ ++L+S V L++ A L
Sbjct: 12 AQGD----DTVRLQATIDGLSASGGG-RVELMAGIHICRGLQLRSGVDLHLAAGAILRPV 66
Query: 82 PRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
P Y E S +++A++A + +TG G ++ F+V +E +
Sbjct: 67 PDYAAYAHTSVSVIAEKSDRGMIVAKDARRISLTGAGRIEAGCESFIVGDDETVGTFIPA 126
Query: 135 NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
E RPR+V F GC V + +V + W LH V C + +R+++I D
Sbjct: 127 ---------EFRPRVVVFEGCDEVEISSVHICRSPMWTLHFVNCTDVAVRNVTIDNDRRL 177
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSA 247
PN DGI ++ VI +I T DD IC KT GP N+ +++ S A
Sbjct: 178 PNTDGIVLDACRGAVIEDCRISTADDGICLKTSIGPDRVAIGRCENILVRRCSVQSLSCA 237
Query: 248 IKLGSASWFDFKALVFDNITI 268
+K+G+ + D +VF++ ++
Sbjct: 238 LKIGTETHGDVTNVVFEDCSV 258
>gi|312960267|ref|ZP_07774778.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
gi|311285489|gb|EFQ64059.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
Length = 599
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 52/285 (18%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
++ +T + V +GAKGDGIH DT AIQ+AIDAC PG C+V P G Y + +
Sbjct: 140 VMQRTTKVAAVFDVKRYGAKGDGIHLDTLAIQTAIDACTPG---CKVLLPKGTYKSGALY 196
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLA------------------ENATDV 105
LKS++TL + E ATLLG R EDYP Y + ++
Sbjct: 197 LKSNMTLEVAEGATLLGSERAEDYPLAGYIQYPYSTTVRPASLINALPRDPRQHQAFENI 256
Query: 106 GITGGGVVD--------------GQAMKF-------------VVTKNEIKNVMVSWNHTG 138
I G G +D GQA+ F V+ K +++ + +
Sbjct: 257 RIVGKGTIDGNGWKRNADVVDERGQALPFYVPSDNTRYAQDGVLAKAQVEQAVARGMNFK 316
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
G + R L+ +NV + PA+ + + +N + + + + ++ N D
Sbjct: 317 DAYG-QMRSSLITLRNVKNVFYGGFTVLNPAFHGIMNLETENVVLAN-TTHKTYDANNGD 374
Query: 199 GIDIEDSNNTVITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
GI+ +S ++ DTGDD + TG ++ D+WI
Sbjct: 375 GIEFANSKGAMVFNNFFDTGDDCVNFAAGTGANAVHQPPQQDAWI 419
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V N++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKNIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|359413926|ref|ZP_09206391.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
gi|357172810|gb|EHJ00985.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
Length = 448
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 23/267 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++++++GAK DGI + AIQ ID C G +V P G +L+ T+ LKS++ L++
Sbjct: 4 YNILNYGAKPDGITNNREAIQKTIDECTAGGGG-RVIIPKGNFLSGTLILKSNIDLHLES 62
Query: 75 DATLLGGPRIEDYPEESSRWY------------VVLAENATDVGITGGGVVDGQAMKFVV 122
A L ED + + + + A + ++ ITG G + GQ K
Sbjct: 63 GAYLSCSIHQEDLIDFAKNFEDDNKDIGWEGGCFLCAFHEENISITGQGTIYGQGDKIFY 122
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
N ++ E RPR F +N+ V ++ ++ A+W LH+ C++
Sbjct: 123 DDN----ADGGFHECPLNIRTELRPRTTFFENIKNLVVKDITFKDAAFWTLHMAGCEHVI 178
Query: 183 IRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT------GPLYNLTA 236
+ + I D NNDGID + + VI+ I GDDAI K G N+
Sbjct: 179 VNGIKILNDQRGANNDGIDPDTCKDVVISNCIIKAGDDAIVIKNSEPMAAKYGSCENIVI 238
Query: 237 TDSWIRTKSSAIKLGSASWFDFKALVF 263
+ + + SA+K+G+ ++ + ++
Sbjct: 239 NNCILYSHDSALKIGTETFNAIRNVIL 265
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 27/250 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
T AIQ ID ++ F G Y T + LKS++ L++ ATL+ +DYP
Sbjct: 18 TEAIQEKIDELHQQGGG-RITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYPVV 76
Query: 91 SSRWYVV---------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
SRW V AENA ++ +TG G++DGQ ++ T E + +
Sbjct: 77 VSRWEGVKREVYASCLYAENAENIAVTGLGMLDGQGQRWWKTFRENREQLAY-------- 128
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP+L+ F C+ + + ++RL + W ++ + C + I ++ I ++PN DGID
Sbjct: 129 ---PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGID 185
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKLGSASW 255
E N I+ ID GDD I K+ T N+T + + A+ LGS
Sbjct: 186 PESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGHGAVVLGSEMS 245
Query: 256 FDFKALVFDN 265
D + + N
Sbjct: 246 GDIRNVTISN 255
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+++V D+GAKGD + +T AIQ AIDA V F PG YLT ++ + ++V L+I
Sbjct: 46 VYNVTDYGAKGDALSMNTMAIQKAIDAAEQAGGGIVV-FHPGIYLTGSLFVGNNVNLHIS 104
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAE---------NATDVGITGGGVVDGQAM----KF 120
+ TL+G I DY + +R + E + I+G GV++G+ K+
Sbjct: 105 KGVTLIGSQDIGDYKKIDTRVAGIEMEWPSALINIIGKKNAAISGDGVINGRGKVFWDKY 164
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C RPR + C NV V ++ L +P +W LHI+ +
Sbjct: 165 WNMREDYEAKGLRWIVDYDCE----RPRGILIAECENVTVRDIVLYQPGFWSLHILYSKH 220
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
I + I + + P+ DGIDI+ S ++ I+ DD C K
Sbjct: 221 ITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKA 268
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 29/258 (11%)
Query: 10 THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVT 69
++ + ++ DFGA DG T A + A+ C + P G++LT I L S+
Sbjct: 2 SYTTVFNITDFGAVPDGKTLCTEAFKKAVKKCEEAGGG-TIYVPAGKFLTGPIHLVSNTN 60
Query: 70 LNIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF 120
L+I A LL IEDYP SRW ++ + +V ITG G +DGQ +
Sbjct: 61 LHIDAGAVLLFSQNIEDYPLVYSRWEGEEAEVYSPLIYGDKVENVSITGHGTLDGQGEPW 120
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
W RPR + F V + +++ W ++ VRC+N
Sbjct: 121 -------------WRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNN 167
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------YTGPLYNL 234
I ++I ++PN DGI+ + N IT I GDD + K+ Y P N+
Sbjct: 168 VVIDGITIKNPADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGVEYSKYRIPCENI 227
Query: 235 TATDSWIRTKSSAIKLGS 252
T T+ + + +GS
Sbjct: 228 TITNCTMLDGHGGVVIGS 245
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A +SAID + ++ PPG++LT + L SH TL
Sbjct: 51 HSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGG------PRIEDYPEE-------SSRWYVVLAENATDVGITGG-GVVDGQ 116
I +DA +LG P IE P ++ N TDV ITGG G ++GQ
Sbjct: 111 YIDKDAVILGAQDESAYPLIEVLPSYGVGRDGGGRHSSLIFGTNLTDVVITGGNGTLNGQ 170
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W+ A ++ RP L+ + +V + N+ L + W +H V
Sbjct: 171 GKYW-------------WDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPV 217
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYN 233
N ++D++I ++PN DGI+ + I I +GDD I K+ G +
Sbjct: 218 YSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFG 277
Query: 234 LTATDSWIRT------KSSAIKLGSASWFDFKALVFDNIT 267
+ D IR S+ I LGS K + ++IT
Sbjct: 278 MPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWAEDIT 317
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FGA GDGI +T A Q+AI ++ P G +LT + L SH+TL
Sbjct: 49 HSVSITEFGAVGDGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTL 108
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ DA +LG +D+P ++ N TDV ITG G +DG
Sbjct: 109 WLDNDAVILGSMNSDDWPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDG 168
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN+ + + RP LV + V + NV +W +H
Sbjct: 169 QGS-------------IWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFMNSPFWTIHP 215
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TY 227
V C + I++++I ++PN DGI+ + S+N I I TGDD I K ++
Sbjct: 216 VYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISF 275
Query: 228 TGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ +T S+ I +GS
Sbjct: 276 GRPSTNINIRRLIGKTTSAGIAIGS 300
>gi|222529558|ref|YP_002573440.1| glycoside hydrolase family protein [Caldicellulosiruptor bescii DSM
6725]
gi|222456405|gb|ACM60667.1| glycoside hydrolase family 28 [Caldicellulosiruptor bescii DSM
6725]
Length = 443
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 21/253 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAKGDG+ + T IQ AID C N V P G YL+ IRLKS+VTL + E A
Sbjct: 5 VTDFGAKGDGVSFCTEVIQKAIDTCFE-NGGGVVVIPAGIYLSRPIRLKSNVTLYLEEGA 63
Query: 77 TLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVD---GQAMKFVVTKNE 126
+ IEDY + + W + A N ++ + G G +D M F N+
Sbjct: 64 VIKATNNIEDYYQIGYYHNEWGEVTSFLYAMNEKNIAVDGKGTIDLSGSSFMDFSRAFNQ 123
Query: 127 IKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ +S EC+P + + F C N+++ + + + W + I
Sbjct: 124 FEE--LSQLDKDQFEETECKPIYRPNQPIFFYNCENISLSGISIIDSPCWTVCIHSSKYI 181
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTATD 238
+ ++ I + PN+DGI + N +I+ GDD + T P N+ ++
Sbjct: 182 KVHNIRIMNNLRVPNSDGIHLCSCENVIISDSFFTCGDDCVAISGITNWDKPCENIIVSN 241
Query: 239 SWIRTKSSAIKLG 251
++T+S+A+++G
Sbjct: 242 CIMQTRSAALRMG 254
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 27/250 (10%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
T AIQ ID ++ F G Y T + LKS++ L++ ATL+ +DYP
Sbjct: 18 TEAIQEKIDELHQQGGG-RITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYPVV 76
Query: 91 SSRWYVV---------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
SRW V AENA ++ +TG G++DGQ ++ T E + +
Sbjct: 77 VSRWEGVKREVYASCLYAENAENIAVTGLGMLDGQGQRWWKTFRENREQLAY-------- 128
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP+L+ F C+ + + ++RL + W ++ + C + I ++ I ++PN DGID
Sbjct: 129 ---PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGID 185
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKLGSASW 255
E N I+ ID GDD I K+ T N+T + + A+ LGS
Sbjct: 186 PESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGHGAVVLGSEMS 245
Query: 256 FDFKALVFDN 265
D + + N
Sbjct: 246 GDIRNVTISN 255
>gi|241113419|ref|YP_002973254.1| Parallel beta-helix repeat-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861627|gb|ACS59293.1| Parallel beta-helix repeat protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 454
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 24/253 (9%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
DT +Q+AID +V G ++ ++L+S V L++ A L P Y +
Sbjct: 16 DTVRLQAAIDGLSASGGG-RVELMAGIHVCRGLQLRSGVDLHLAAGAILRPVPDYAAYAQ 74
Query: 90 -------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
E S +++A++A + +TG G ++ F+V +E +
Sbjct: 75 TTVSVIAEKSDRGMIVAKDARRISLTGAGRIEAGCDSFIVGDDETVGTFIPA-------- 126
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
E RPR+V F GC V + +V + W LH V C + +R++ I D PN DGI +
Sbjct: 127 -EFRPRVVVFEGCDEVEISSVHICRSPMWTLHFVNCTDVAVRNVIIDNDRRLPNTDGIVL 185
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ VI +I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 186 DACRGAVIEDCRISTADDGICLKTSIGPDRVAIGRCENILVRRCSVQSLSCALKIGTETH 245
Query: 256 FDFKALVFDNITI 268
D +VF++ ++
Sbjct: 246 GDVTNVVFEDCSV 258
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A +SAID + ++ PPG++LT + L SH TL
Sbjct: 51 HSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGG------PRIEDYPEE-------SSRWYVVLAENATDVGITGG-GVVDGQ 116
I +DA +LG P IE P ++ N TDV ITGG G ++GQ
Sbjct: 111 YIDKDAVILGAQDESAYPLIEVLPSYGVGRDGGGRHSSLIFGTNLTDVVITGGNGTLNGQ 170
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W+ A ++ RP L+ + +V + N+ L + W +H V
Sbjct: 171 GKYW-------------WDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPV 217
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYN 233
N ++D++I ++PN DGI+ + I I +GDD I K+ G +
Sbjct: 218 YSRNVLVKDLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFG 277
Query: 234 LTATDSWIR------TKSSAIKLGSASWFDFKALVFDNIT 267
+ D IR S+ I LGS K + ++IT
Sbjct: 278 MPTKDLLIRRLTCISPDSATIALGSEMSGGIKNVWAEDIT 317
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTL 100
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
++ +DA ++G P R + P E + ++ N TDV ITG G +D
Sbjct: 101 SLDKDAVIIGSPDSSNWPVIDPLPSYGRGRELPGERHQ-SLIFGYNLTDVIITGANGTID 159
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ V W H + RP LV + NV + N+ + +W +H
Sbjct: 160 GQGA-----------VWWDWFHNHTL--NYTRPHLVELMYSTNVVISNLTFKNSPFWNIH 206
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
V C + ++I ++PN DGI+ + S N I + GDD I K +
Sbjct: 207 PVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGIS 266
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGS 252
+ P N++ T+ T+ A I +GS
Sbjct: 267 FAHPSSNISITNITGETRGGAGIAIGS 293
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ +++++D+GA DG T AI +AI+A V P G YLT I LKS++ L+
Sbjct: 1 MQLYNIVDYGAVQDGTKMATEAIAAAIEAASNAGGG-TVFVPAGTYLTGAIFLKSNIELH 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF-V 121
+ A L + DYP SRW + EN ++ ITG G +DG +
Sbjct: 60 VSPGAILSFSTELADYPVVESRWEGVQREVHASCIYGENLENISITGSGTLDGNGQPWWE 119
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+N + + RP+L+ F C+ V + +V L+ W ++ + C N
Sbjct: 120 KHRNHPEELQYP------------RPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNV 167
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLT 235
I ++SI ++PN DGI+ E +N I+ ID GDD I K T P N+T
Sbjct: 168 TIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIPCENIT 227
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
T+ + A+ LGS D + + N
Sbjct: 228 ITNCTMVHGHGAVVLGSEMSGDIRNVTISN 257
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H SV DFG GDG +T A Q+AID + + PPG +LT + L S+ TL
Sbjct: 42 HSASVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEGGSLLYVPPGRWLTGSFNLTSYFTL 101
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+ +DA LL +YP + +R+ ++ N TDV ITG G +DG
Sbjct: 102 YLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDG 161
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W A + RP L+ + N+ + N+ L W +H
Sbjct: 162 QGELW-------------WTKFRAGELNHTRPYLIEIMFSTNIQISNLTLINSPSWNVHP 208
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 209 VYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAVKS 259
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPG--NKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFGA GDG +T A ++A+ + Q+ P G +LT +I L SH+TL +
Sbjct: 24 SITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHLTLFLE 83
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITG-GGVVDGQAM 118
A +LG DYP E Y L +N DV ITG G +DGQ
Sbjct: 84 NGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTIDGQGG 143
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V W + D R ++ +G +++ ++N+ + W +H V C
Sbjct: 144 -------------VWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYC 190
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLT 235
N I+++++ ++PN DGID + S + I I GDDAI K+ G Y +
Sbjct: 191 KNVVIKNLTVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMP 250
Query: 236 ATDSWIRTKSSAIK 249
+ IR SA K
Sbjct: 251 SKHIQIRRIVSASK 264
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTL 100
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
++ +DA ++G P R D P + + ++ N TDV ITG G +D
Sbjct: 101 SLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQ-SLIFGLNLTDVIITGANGSID 159
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ + W H + RP LV + NV + N+ + +W +H
Sbjct: 160 GQGA-----------IWWGWFHNHTL--NYTRPHLVELMYSTNVVISNLTFKNSPFWNIH 206
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
V C +R ++I N+PN DG+ + S N I + G D I K +
Sbjct: 207 PVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGIS 266
Query: 227 YTGPLYNLTATDSWIRTK-SSAIKLGS 252
+ P N++ +D T+ S I GS
Sbjct: 267 FAQPSSNISISDITGETRGGSGIAFGS 293
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 27/242 (11%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDGIH DT AIQ+AI +CP K +V P G+YL ++ LKS TL+I ++A LL
Sbjct: 87 FGAKGDGIHDDTLAIQTAIASCP---KDGRVYIPEGKYLVTSLFLKSDFTLDIGKNAVLL 143
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF---VVTKNEIKNVMVSWNH 136
G E + + ++ + G G +G + ++T + NV+++
Sbjct: 144 GHAEREKFGVLPG-----MIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNVVITGEG 198
Query: 137 T--GACSGDE-----------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
T G + D+ RPR+V C +V + V ++ W LH D+
Sbjct: 199 TLDGCATFDDWWEDDRAKIIAFRPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFSDDLRF 258
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTATDSW 240
D++I +++PN DG+D E N I + GDD I K+ Y G Y + + +
Sbjct: 259 LDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVPSQNIE 318
Query: 241 IR 242
+R
Sbjct: 319 VR 320
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT +IQ+AI +CP G + V FP G YLT + LKS++TL + +
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAIISCPDGGR---VFFPEGIYLTYPLFLKSNITLELGKG 141
Query: 76 ATLLGGPRIEDYP-----------EES--SRWY---------VVLAENATDVGITGGGVV 113
A LLG E YP E+S W ++ +V I G G +
Sbjct: 142 AVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGEGTI 201
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + +W H RPR + C+NV + + ++ W +
Sbjct: 202 DGNSS------------FDTWWHDAKVKRIAWRPRTIFLNKCKNVLIEGITIKNSPSWTI 249
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H + N +++I + PN DG+D E + VI + GDD I K+
Sbjct: 250 HPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKS 302
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV+DFGA GI +T +I +AIDAC +V P GE+LT + LKS+V L + E+
Sbjct: 52 SVVDFGAVKGGIADNTKSIAAAIDACHKAGGG-RVVIPEGEWLTGPVHLKSNVNLYLSEN 110
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVV--- 122
A L DY P + W +V A +V ITG G++ + + V
Sbjct: 111 AVLCFTDHPSDYLPAVMTSWEGMECYNYSPLVYAIGCENVAITGKGMLKPKMDTWKVWFA 170
Query: 123 ----TKNEIKNV--MVSWN-----HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
N +K + M S + A + RP L+ F CRNV + ++RE +W
Sbjct: 171 RPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGFKIRESPFW 230
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+HI C+ R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 231 TIHIYMCNGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 283
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FG GDG +T A ++AID + ++ PPG++LT + L SH TL
Sbjct: 4 HSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTL 63
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWY-VVLAENATDVGITGG-GVVDGQ 116
IH+DA +LG DYP + R+ ++ N TDV I GG G ++GQ
Sbjct: 64 YIHKDAVILGSQEESDYPHIPPLPSYGKGRDGGGRFSSLIFGTNLTDVVIIGGNGTINGQ 123
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
V W+ + RP L+ + V + N+ L + W +H V
Sbjct: 124 GR-------------VWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPV 170
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYN 233
C + I+ M+I + PN DGI+ + N I I +GDD I K+ G Y
Sbjct: 171 YCSDVIIQGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 230
Query: 234 LTATDSWIR------TKSSAIKLGSASWFDFKALVFDNIT 267
+ D IR S+ I LGS K + ++IT
Sbjct: 231 VPTRDIVIRRLTCISPDSAVIALGSEMSGGIKNVRAEDIT 270
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 113/266 (42%), Gaps = 28/266 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DF DGI DT A ++AI + PPG YLT IRL S++ I
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAERQGG-GHIVAPPGTYLTGPIRLISNLVFEIQAG 65
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
ATLL +E +P SR + +N T+V +TG G +DGQ + E
Sbjct: 66 ATLLFTDDVEQFPIVDSRLEGVKSKAYMPCIYGKNLTNVILTGSGTLDGQGTNWWKLHRE 125
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ RP L+GF + + ++ L W +H + C + I+++
Sbjct: 126 TPEKLAYP-----------RPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNI 174
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-------GPLYNLTATDS 239
SI ++PN DGID E N I ID GDD I K+ T N+T ++
Sbjct: 175 SILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSACENITISNC 234
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDN 265
+ A+ LGS + + + N
Sbjct: 235 TMVHGHGAVVLGSEMSRNIRNVTISN 260
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTL 100
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
++ +DA ++G P R D P + + ++ N TDV ITG G +D
Sbjct: 101 SLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQ-SLIFGLNLTDVIITGANGSID 159
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ + W H + RP LV + NV + N+ + +W +H
Sbjct: 160 GQGA-----------IWWGWFHNHTL--NYTRPHLVELMYSTNVVISNLTFKNSPFWNIH 206
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
V C +R ++I N+PN DG+ + S N I + G D I K +
Sbjct: 207 PVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGIS 266
Query: 227 YTGPLYNLTATDSWIRTK-SSAIKLGS 252
+ P N++ +D T+ S I GS
Sbjct: 267 FAQPSSNISISDITGETRGGSGIAFGS 293
>gi|222106757|ref|YP_002547548.1| polygalacturonase [Agrobacterium vitis S4]
gi|221737936|gb|ACM38832.1| polygalacturonase [Agrobacterium vitis S4]
Length = 416
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE-------ESSRWYVVLAEN 101
+V G + + L+S V L++ E A L P + Y + E S +++A
Sbjct: 8 RVSLKAGSHQVGGLTLRSGVELHLGEGAVLRPVPDYQAYGDNIVSVIAEKSNRAMLVARG 67
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVW 161
A + +TG G +D F+ + V + E RPR++ GCR V +
Sbjct: 68 ADTIALTGSGRIDAGGDAFIAGDDVSVGVFIPA---------EFRPRVLVLEGCRGVRLD 118
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
++++ W LH V C++ + +++I + PN DGI ++ +I I T DD
Sbjct: 119 HIKVENSPMWTLHFVNCEDVSLANVAIRNNCRLPNTDGIVLDACRRVLIEDCTISTADDG 178
Query: 222 ICPKTYTGPLYNLTAT--DSWIR-----TKSSAIKLGSASWFDFKALVFDNITI 268
IC KT GP T D +R ++S A+KLG+ S+ DF +VF++ +
Sbjct: 179 ICLKTSVGPDGKAIGTCEDVLVRRCTVSSQSCALKLGTESFGDFSRVVFEDCRV 232
>gi|373952797|ref|ZP_09612757.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889397|gb|EHQ25294.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 415
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 16/244 (6%)
Query: 1 VQLLLLLST--THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ LL ST + + G D +T IQS ID V P G YL
Sbjct: 6 ISAFLLFSTLIARSQDYVITKLGVGADSTKLNTTVIQSVIDKANASGGGTIV-IPKGVYL 64
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITG 109
T + K L + E A L G I DYP SR +Y L A + + ITG
Sbjct: 65 TGALFFKPKTRLRLEEGARLKGSDNIADYPLIPSRMEGRNLDYYAALVNAYHVDNFSITG 124
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G ++G +++ + ++ + N + + + + RPRL+ GC NV + NV+L
Sbjct: 125 PGEINGNGLRYWKAFWDHRDSLKKLNQS-STNLEVHRPRLLFIWGCNNVTIQNVKLHNSG 183
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFN---TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W H+ + +N I + I F P+ DG+DI+ I I DDA+C K
Sbjct: 184 FWTTHLYQSNNVLIENCDIRSPFKPVPAPSTDGVDIDVCKKVTIRNCYISVNDDAVCIKG 243
Query: 227 YTGP 230
GP
Sbjct: 244 GKGP 247
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A Q+AID + Q+ PPG +LT + L SH TL
Sbjct: 51 HSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGG------PRIEDYPE-------ESSRWY-VVLAENATDVGITG-GGVVDG 115
+H+DA LL P I+ P + R+ ++ N TDV ITG G +DG
Sbjct: 111 YLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDG 170
Query: 116 QAMKFVVT--KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
Q + K E+K RP L+ + NV + ++ L W +
Sbjct: 171 QGALWWAKFHKGELKYT---------------RPYLIEIMHSDNVQISSLTLVNSPSWNV 215
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H V N I+ ++I +PN DGI+ + NT I I +GDD I K+
Sbjct: 216 HPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 268
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 38/271 (14%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRL 64
L+ H S+ +FGA GDGI +T A Q+AI ++ P G +LT + L
Sbjct: 43 LNEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDL 102
Query: 65 KSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG 110
SH+TL + DA +LG +D+P ++ N TDV ITG
Sbjct: 103 ISHLTLWLDNDAVILGSTNSDDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVVITGN 162
Query: 111 -GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DGQ + WN+ + + RP LV + V + NV
Sbjct: 163 NGTIDGQGS-------------IWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFLNSP 209
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK---- 225
+W +H V C + I++++I ++PN DGI+ + S+N I I TGDD I K
Sbjct: 210 FWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWD 269
Query: 226 ----TYTGPLYNLTATDSWIRTKSSAIKLGS 252
++ P N+ +T S+ I +GS
Sbjct: 270 GYGISFGRPSTNINIRRLIGKTTSAGIAIGS 300
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV+DFGA GI +T +I +AI+AC +V P GE+LT + LKS+V L + E+
Sbjct: 52 SVVDFGAVKGGIADNTKSITAAINACHKAGGG-RVVIPEGEWLTGPVHLKSNVNLYLSEN 110
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVV--- 122
A L DY P + W +V A +V ITG G++ + + V
Sbjct: 111 AVLCFTDNPSDYLPAVMTSWEGMECYNYSPLVYAVGCENVAITGKGMLKPKMDTWKVWFA 170
Query: 123 ----TKNEIKNV--MVSWN-----HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
N +K + M S + A + RP L+ F CRNV + ++RE +W
Sbjct: 171 RPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGFKIRESPFW 230
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+HI CD R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 231 TIHIYMCDGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 283
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A Q+AID + Q+ PPG +LT + L SH TL
Sbjct: 51 HSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGG------PRIEDYPE-------ESSRWY-VVLAENATDVGITG-GGVVDG 115
+H+DA LL P I+ P + R+ ++ N TDV ITG G +DG
Sbjct: 111 YLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDG 170
Query: 116 QAMKFVVT--KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
Q + K E+K RP L+ + NV + ++ L W +
Sbjct: 171 QGALWWAKFHKGELKYT---------------RPYLIEIMHSDNVQISSLTLVNSPSWNV 215
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H V N I+ ++I +PN DGI+ + NT I I +GDD I K+
Sbjct: 216 HPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 268
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 46/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG+ D+ IQ+AI+ACP K V P G+YL + LKS++ L I +D
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACP---KDGTVYIPKGKYLCTPVFLKSNIDLWIDKD 140
Query: 76 ATLLGGPRIEDYP---------EESSRWYV--------------VLAENATDVGITGGGV 112
A L+G + YP +E+ + + + + +V I G G+
Sbjct: 141 AILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGEGI 200
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A M+ W RP V C+N+ + + + W
Sbjct: 201 LDGNAG------------MLDWWKDAKKKNIAWRPNTVFLHNCKNIAMQGLCIMNSPSWT 248
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H DN + +I N+PN DG+D E N +I I GDD + K+
Sbjct: 249 VHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P N+ +S R ++ +GS
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGS 336
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV DFG GDG +T A + AI+ N Q+ PPG +LT ++ L SH TL IH
Sbjct: 44 SVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHFTLFIH 103
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWY-VVLAENATDVGITG-GGVVDGQAM 118
+DA +LG P I+ P + R+ ++ + TDV ITG G +DGQ
Sbjct: 104 KDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGD 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W RP L+ + NV + N+ L W +H V C
Sbjct: 164 LW-------------WKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 211 SNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 258
>gi|168335158|ref|ZP_02693265.1| glycoside hydrolase family 28 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 423
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 32/243 (13%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
TAAIQ AI+ + + F G YLT + +K + + ++G ++ DY E
Sbjct: 18 TAAIQDAINQTSAAGEI--LVFNKGTYLTGLLEMKDNTXIEFETGTAIIGSSQLSDY-EG 74
Query: 91 SSRWYV-----------VLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
S+ +V + A + ++ + G V+DG+ F +
Sbjct: 75 SAELFVDAVGSQRGRCLLYAHSKQNISLKGSCVIDGRLHNF----------------SKD 118
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
G RP L+ F+ C+N+ + + + W L I +C+ I +++I+ NNDG
Sbjct: 119 LPGYAKRPFLLNFINCKNITLDGILFKNSPAWMLCISKCNGFTIENVTIFSR-TGGNNDG 177
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDF 258
IDI S N VI IDT DDA+C K TY P N+ D + T A K+G+ S D
Sbjct: 178 IDINSSQNGVIRNCVIDTDDDAVCIKSTYDSPCENILIEDCMLCTNWGAFKIGTESMGDI 237
Query: 259 KAL 261
K +
Sbjct: 238 KNI 240
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 44/262 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V FGAKGDG+ DT A+Q+AI +CP + V P G+YL ++ LK ++T+ + E
Sbjct: 82 NVKRFGAKGDGVSNDTLALQTAIMSCPENGR---VYIPKGKYLITSLFLKDNLTIELGEG 138
Query: 76 ATLLGGPRIEDY--------PEESSRWYV--------------VLAENATDVGITGGGVV 113
A LLG + E++ +++ +Y+ + N +V I G G +
Sbjct: 139 AELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVRIIGRGCL 198
Query: 114 DGQAMKFVVTKN-EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+GQA K KN ++KN+ +W RPR + C NV + +++ W
Sbjct: 199 NGQASKENWWKNPKVKNI--AW-----------RPRSIFLNSCENVVIEGIKIMNSPSWT 245
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTG 229
+H +N ++ I ++PN DGID E N + GDD I K+ Y G
Sbjct: 246 IHPFLTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLG 305
Query: 230 PLYNLTATDSWIRTKSSAIKLG 251
+ N + + I K+ ++K G
Sbjct: 306 KVLNKPSKNFII--KNCSMKYG 325
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 123/283 (43%), Gaps = 48/283 (16%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT 61
+L+++ + +V +FGAKGDG+H DT IQ AI++CP K +V P G Y +T
Sbjct: 69 ELVVIKTDYEFVTLNVKEFGAKGDGVHDDTTMIQCAINSCP---KNGRVLIPEGCYKIST 125
Query: 62 IRLKSHVTLNIHEDATL-----------LGGPRIEDYPEESS----RWY---------VV 97
+ LKS + L + A L L G RIE + E W ++
Sbjct: 126 LFLKSDLRLELGRGAVLSAFTDRSKFPILPG-RIESFDETEEYNLGSWEGNPLDSFAGII 184
Query: 98 LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRN 157
N ++V ITG G +DG A + +W + RPRL+ C N
Sbjct: 185 TGINVSNVEITGEGTIDGCADE------------TNWWNNPKVRNIAWRPRLIFLNHCNN 232
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
+ V + ++ W +H D+ D++I ++PN DG+D E N +I V
Sbjct: 233 ITVQGITVKNSPCWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSL 292
Query: 218 GDDAICPKT---YTG-----PLYNLTATDSWIRTKSSAIKLGS 252
GDD I K+ Y G P NL +R +I +GS
Sbjct: 293 GDDCIAIKSGKIYMGAKHKRPSENLEIRQCCMRDGHGSITIGS 335
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGG---TVVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV +FGA GDG +TAA + A+ G ++ PPG +LT + L S TL +H
Sbjct: 96 SVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRFTLFLH 155
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQAM 118
A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 156 RGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQGN 215
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R L+ + N+ + ++ LR +W +H V C
Sbjct: 216 MWW---------ELWWNRTL----NHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYC 262
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++D++I N PN DGID + S+ I I++GDD + K+
Sbjct: 263 SNVVMKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 310
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|312621451|ref|YP_004023064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201918|gb|ADQ45245.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 446
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I ++ + GAK DGI + AIQ AID C +V P G YL+ I LKS+VTL +
Sbjct: 2 IINITELGAKPDGITFCEGAIQKAIDMCHEKGGG-RVVVPAGVYLSRPIELKSNVTLYLE 60
Query: 74 EDATLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVD---GQAMKFVVT 123
E A L P IEDY + + W + A N ++ I G G +D M F
Sbjct: 61 EGAILKASPYIEDYFKIGYYHNEWGDVTSFLFAMNQKNISIDGKGTIDLSGNSFMDFSQA 120
Query: 124 KN---EIKNVMVSWNHTGACSGDECRPRL-----VGFLGCRNVNVWNVRLREPAYWCLHI 175
N E++N+ EC+P+ + F C N+N+ + + + W + I
Sbjct: 121 FNIFDELQNLTPE-----QFEETECKPKFRPNQPIFFYNCGNINLSGISIIDSPCWTVCI 175
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLY 232
I + I + PN+DGI + N +IT GDD + + T P
Sbjct: 176 HSSKFIKINSIKIVNNLRVPNSDGIHLCSCENAIITSNFFVCGDDCVALSSITNWEKPCE 235
Query: 233 NLTATDSWIRTKSSAIKLG 251
N+ ++ ++T+S+A+++G
Sbjct: 236 NVIVSNCIMQTRSAALRMG 254
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFG GDG+ +T A + A+ A K Q+ PPG +LTA L SH+TL +
Sbjct: 74 NLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLA 133
Query: 74 EDATLLG---------GPRIEDY---PEESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
EDA +LG P + Y E Y ++ ++ DV ITG G ++GQ
Sbjct: 134 EDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQ 193
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W + R LV + ++ + N+ LR+ +W LH C
Sbjct: 194 TW-------------WKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDC 240
Query: 179 DNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
N I+ ++I F PN DGID + + +I I GDDAI K+ Y
Sbjct: 241 KNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGR 300
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA I +GS ++ +NI I
Sbjct: 301 PSMNIMIRNLVVRSMVSAGISIGSEMSGGVSNVMVENILI 340
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTK 124
A L +DYP SRW + A+N ++ +TG G +DG K
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKK----- 112
Query: 125 NEIKNVMVSWNHTGACSGDEC---RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
W HT D RP+L+ F C + V +++L + W ++ + C N
Sbjct: 113 ---------WWHTFRNESDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNA 163
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLT 235
+++I ++PN DGID E N I+ ID GDD I K T Y N+T
Sbjct: 164 TFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENIT 223
Query: 236 ATDSWIRTKSSAIKLGS 252
T+ + + LGS
Sbjct: 224 ITNCTMVHGHGGVVLGS 240
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA ++G P D+P ++ N TDV ITG G +DG
Sbjct: 101 SLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + + RP LV + +V + N+ + +W +H
Sbjct: 161 QGAYW-------------WDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C + ++I ++PN DGI+ + S N I+ + GDD I K+
Sbjct: 208 VYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKS 258
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGG---TVVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWNTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H SV DFG GDG +T A Q+AID + + PPG +LT + L S+ TL
Sbjct: 51 HSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTL 110
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+ +DA LL +YP + +R+ ++ N TDV ITG G +DG
Sbjct: 111 YLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W A + RP L+ + N+ + N+ L W +H
Sbjct: 171 QGELW-------------WTKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 218 VYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTL 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA ++G P D+P ++ N TDV ITG G +DG
Sbjct: 101 SLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + + RP LV + +V + N+ + +W +H
Sbjct: 161 QGAYW-------------WDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C + ++I ++PN DGI+ + S N I+ + GDD I K+
Sbjct: 208 VYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKS 258
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASAGGG---TVVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPIVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWNTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|404406296|ref|ZP_10997880.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 635
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 24/249 (9%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ + GA GDG +TA +Q+AID C V G Y+T T++LKS+VTL + A
Sbjct: 182 IAEAGAVGDGATVNTAVLQAAIDKCSARKGGGTVWVRDGIYVTGTLQLKSNVTLRVEAGA 241
Query: 77 TLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G +D+P + ++ AE A+++ I GGG++DG ++
Sbjct: 242 ILRGSVNHDDFPPLRCSLPSFRGKEDFQMIYAEKASNITICGGGIIDGCSL--------- 292
Query: 128 KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMS 187
+ G + E RPRL+ + C NV + V L A W + C + +++
Sbjct: 293 ---FEGYPWRGRNNEHE-RPRLIRMVECENVAIDGVTLARSANWTQYYEACRGMRVENVT 348
Query: 188 IYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-GPLYNLTATDSWIR-TKS 245
+ T N DGID+ ++ V+ GDDAIC K + P N+ D R
Sbjct: 349 VRCYTGTNNQDGIDLSGCSDVVVRNFLCSCGDDAICLKALSLTPAENIFVEDVRARYANC 408
Query: 246 SAIKLGSAS 254
+ +K+G+ +
Sbjct: 409 NLVKIGTET 417
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV DFG GDG +T A + AI+ N Q+ PPG +LT + L SH TL IH
Sbjct: 44 SVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFIH 103
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWY-VVLAENATDVGITG-GGVVDGQAM 118
+DA +LG P I+ P + R+ ++ + TDV ITG G +DGQ
Sbjct: 104 KDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGD 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W RP L+ + NV + N+ L W +H V C
Sbjct: 164 LW-------------WKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 211 SNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 258
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFGA GDG +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 3 HSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHLTL 62
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDG 115
+ E A +LG + ++P E ++ L +N DV ITG G +DG
Sbjct: 63 FLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTIDG 122
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q +V W H D R LV + R++ + NV + +W +H
Sbjct: 123 QG-----------SVWWDWFHNKTL--DFTRGHLVELIDSRHITISNVTFKNSPFWTIHP 169
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C + I+D++I PN DGID + S+N I I TGDD I K+
Sbjct: 170 VYCSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKS 220
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 30/237 (12%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRL 64
L H S+ +FGA GDGI +T A Q+AI + ++ P G +LT + L
Sbjct: 35 LDKVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDL 94
Query: 65 KSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG 110
SH+TL + +DA +LG ED+P ++ N TDV ITG
Sbjct: 95 ISHLTLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGN 154
Query: 111 -GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G++DGQ + W+ + D RP LV + V + N+
Sbjct: 155 EGIIDGQGS-------------IWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSP 201
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C +++++I ++PN DGID + S++ I I TGDD I K+
Sbjct: 202 FWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKS 258
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG+ +T A + AI+ + + Q+ PPG++LT + L SH TL
Sbjct: 52 HTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTL 111
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRWY-VVLAENATDVGITGG-GVVDG 115
+H+DA +LG ++P+ R+ ++ N TDV ITG G +DG
Sbjct: 112 FVHKDAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDG 171
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + RP L+ + + + ++ L W +H
Sbjct: 172 QGAYW-------------WDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHP 218
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I+ ++I ++PN DGID + +NT I I +GDD I K+
Sbjct: 219 IYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKS 269
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ---VRFPPGEYLTATIRLKSHVTLNI 72
S+ DFGA GDG +T A SAID N + + P G YLT + L SH+TL +
Sbjct: 46 SISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYL 105
Query: 73 HEDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQA 117
+ A + E +P E R Y+ + + DV ITG G +DGQ
Sbjct: 106 ADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQG 165
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ WN + RP L+ F N+ V +V L+ +W LH V
Sbjct: 166 EPW-------------WNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVY 212
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNL 234
C N + ++I ++ N DGID + S+N I I TGDD + K+ G YN
Sbjct: 213 CSNVVVHHVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNR 272
Query: 235 TATDSWIR--TKSS---AIKLGSASWFDFKALVFDNITI 268
+ D IR T SS I +GS + + + +NIT+
Sbjct: 273 PSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENITL 311
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNGKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 127/279 (45%), Gaps = 39/279 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ---VRFPPGEYLTATIRLKSHVTLNI 72
S+ DFGA GDG +T A +AID N Q + P G YLT + L SH+TL +
Sbjct: 46 SIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSHMTLYL 105
Query: 73 HEDATL-----LGGPRIED-------YPEESSRWYV--VLAENATDVGITG-GGVVDGQA 117
+ A + G R+ D E R Y+ + + DV ITG G +DGQ
Sbjct: 106 ADGAVIKAVQDTGKWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGTIDGQG 165
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ WN + + RP L+ F N+ V +V L+ A+W LH V
Sbjct: 166 EPW-------------WNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVY 212
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNL 234
C N + ++I ++ N DGID + S+N I I TGDD + K+ G YNL
Sbjct: 213 CSNVVVHHVTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNL 272
Query: 235 TATDSWIR--TKSS---AIKLGSASWFDFKALVFDNITI 268
+ D IR T SS I +GS + + + +NIT+
Sbjct: 273 PSRDITIRRITGSSPFAGIAIGSETSGGIQNVTVENITL 311
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 108/242 (44%), Gaps = 35/242 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA GDG+ +T A + AI+AC N +V P G++LT I LKS+V L++ + A
Sbjct: 70 ITDFGAVGDGLTKNTEAFKKAIEACH-NNGGGRVVVPYGKFLTGGIYLKSNVNLHLADSA 128
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM--------- 118
T++ DYP +RW + A ++ +TG G++DG A
Sbjct: 129 TIVFSRDSSDYPIVFTRWEGMECMNYASFIYAYGEENIAVTGNGILDGNANNDYWWWWCG 188
Query: 119 -----------KFVVTKNEIKNVM---VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
K +N + +M V G RP + C+NV + +V+
Sbjct: 189 AKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCKNVWIADVK 248
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
L W L+ V C+N I + + + PNNDG D E N I DTGDD I
Sbjct: 249 LINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFDTGDDCIAI 306
Query: 225 KT 226
K+
Sbjct: 307 KS 308
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ ++ FGA D ++ + A G V P GE+LT + LKS+V L++
Sbjct: 1 MYDILTFGASIDELNTEAIQQAIDAAASDGGGT---VVVPAGEFLTGALFLKSNVELHLS 57
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT- 123
A L +DYP SRW + A+N ++ +TG G +DG K+ T
Sbjct: 58 AGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQNVENISVTGFGTLDGNEKKWWHTF 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+NE N+ RP+L+ F C + V +++L + W ++ + C N
Sbjct: 118 RNEPDNLAYP------------RPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATF 165
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTAT 237
+++I ++PN DGID E N I+ ID GDD I K T Y N+T T
Sbjct: 166 DNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYERIACENITIT 225
Query: 238 DSWIRTKSSAIKLGS 252
+ + + LGS
Sbjct: 226 NCTMVHGHGGVVLGS 240
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 116/268 (43%), Gaps = 43/268 (16%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 25 HSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFNLISHLTL 84
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
++ +DA ++G P +P ++ N TDV ITG G +DG
Sbjct: 85 SLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLIFGLNLTDVIITGANGSIDG 144
Query: 116 QAMKFVVTKNEIKNVMVSW--NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
Q + W NHT + RP LV + NV + N+ + +W +
Sbjct: 145 QGA-----------IWWGWFRNHTL----NYTRPHLVELMYSTNVVISNLTFKNSPFWNI 189
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-------- 225
H V C ++ ++I N+PN DG+ + S N I + GDD I K
Sbjct: 190 HPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGI 249
Query: 226 TYTGPLYNLTATDSWIRTKSSA-IKLGS 252
++ P N++ +D T+ A I GS
Sbjct: 250 SFAQPSSNISISDITGETRGGAGIAFGS 277
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 29/259 (11%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
D+GAKGDG+ +T AIQSAIDA + F G YLT +I LKS L + + +
Sbjct: 29 DYGAKGDGVTANTVAIQSAIDAA--AKTGGTIVFASGVYLTGSIFLKSGTRLRVDKGVEI 86
Query: 79 LGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAM----KFVVTKN 125
G YP +R W L ++V I+G GV+DG K+ +
Sbjct: 87 RGMQDQAAYPVMPTRIAGIEMKWPAALINVYEQSNVKISGQGVIDGDGKMWWDKYWQVRK 146
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + + W A D RPRL+ NV + + LR +W +HI +
Sbjct: 147 DYEPKGLRW----AADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWTVHICYSRKVTVDG 202
Query: 186 MSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLT 235
++I + P+ DGID++ S++ ++ I+ DDAI K P N+
Sbjct: 203 VTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVV 262
Query: 236 ATDSWIRTKSSAIKLGSAS 254
D +R ++ I GS +
Sbjct: 263 IHDVTVRDGAAGITFGSET 281
>gi|421726715|ref|ZP_16165884.1| polygalacturonase family protein [Klebsiella oxytoca M5al]
gi|410372442|gb|EKP27154.1| polygalacturonase family protein [Klebsiella oxytoca M5al]
Length = 452
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 23/258 (8%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DG+ DT Q A+D V G+Y +R+ S+ L + A L+
Sbjct: 12 ADGMTRDTEIFQKALDTLSQAGGGTLV-VESGKYYLGGLRMGSNTCLWLSPGAELIVSDN 70
Query: 84 IEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
D+ + E S + A +A ++ I GGG + G A + + S +
Sbjct: 71 YADFTQAVALSRAECSDRAFLYARDAENISICGGGTIYGNADGWFSS---------SVDD 121
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
G + E RPR++ C+ V + N+R+ W +H+V C I +S+ D N
Sbjct: 122 MGYRTPAEQRPRIILLENCQRVRLENIRVHHAPMWTIHLVSCSQVVIDGISVDNDLTMAN 181
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSWIRTKSSAIKL 250
D +DI+ I DDAIC P PL +T + + +KS A K+
Sbjct: 182 TDALDIDSCQQVHIANSFFSAADDAICLKTTDKPAAIQRPLRQVTIVNCTLHSKSCAFKI 241
Query: 251 GSASWFDFKALVFDNITI 268
G+ +W D + +V N TI
Sbjct: 242 GTETWQDIEDIVVSNCTI 259
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 33/262 (12%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA+GDG+ +TAA+Q AI+A + + PG YLT ++ LKS + L + + TL
Sbjct: 47 DFGARGDGVTRNTAALQRAIEAAA--AQNATLVLAPGTYLTGSLFLKSGMALRLDKGVTL 104
Query: 79 LGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+G IE YP +R W L + TDV I G G +DG F + ++
Sbjct: 105 VGEQTIESYPVMQTRIAGIELPWPSALLNVYDQTDVRIYGEGKIDGNGKVFW---DRFQS 161
Query: 130 VMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREP------AYWCLHIVRCDN 180
+ + G A D RPRL+ + + N + EP +W + IV +
Sbjct: 162 IRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHD 221
Query: 181 TFIRDMSIYG--DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
+ +++ D P+ DG+DI+ S+ ++ ID DDA+C K P
Sbjct: 222 VKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRP 281
Query: 231 LYNLTATDSWIRTKSSAIKLGS 252
N+ +S IR + + GS
Sbjct: 282 TENVVIRNSTIRAAYAGVTFGS 303
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 41 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTL 100
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
++ +DA ++G P R D P + + ++ N TDV ITG G +D
Sbjct: 101 SLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQ-SLIFGLNLTDVIITGANGSID 159
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ + W H + RP LV + NV + N+ + +W +H
Sbjct: 160 GQGA-----------IWWGWFHNHTL--NYTRPHLVELMYSTNVVISNLTFKNSPFWNIH 206
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
V C ++ ++I N+PN DG+ + S N I + G D I K +
Sbjct: 207 PVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGIS 266
Query: 227 YTGPLYNLTATDSWIRTK-SSAIKLGS 252
+ P N++ +D T+ S I GS
Sbjct: 267 FAQPSSNISISDITGETRGGSGIAFGS 293
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 43/264 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V F AKGDGI DT AIQ+AI +CP + V P G Y T TI LKS++TL + +
Sbjct: 85 NVKHFNAKGDGITDDTLAIQAAIMSCPDDGR---VFIPKGTYATKTIFLKSNLTLELEKG 141
Query: 76 ATLL------GGPRIEDYPEESS--RWYV--------------VLAENATDVGITGGGVV 113
ATLL G + Y + S+ +Y+ + N ++V + G GV+
Sbjct: 142 ATLLYSASFESGAILPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNLIGEGVL 201
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG +++NV +W RPRL + +VNV + L+ W +
Sbjct: 202 DGNGSIGWWDFPKVRNV--AW-----------RPRLFQIIHSHHVNVQGITLQNSPSWTV 248
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY- 232
H + D+ D+ I ++PN DG+D E + +I V GDD I K +G +Y
Sbjct: 249 HPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIK--SGKIYL 306
Query: 233 --NLTATDSWIRTKSSAIKLGSAS 254
L +I ++ ++ G +
Sbjct: 307 GSRLKRASEYITIRNCSMNFGHGA 330
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S L++
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIAAAGGGR---LTLPAGRYRSGCLNLPSDFELHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ R+ DY E S ++ A ++ I+G G +DG + + +
Sbjct: 61 AGAVLIASQRLADYQAVQALSCAEKSHNVLLYALGQRNITISGTGRIDGDGEAWFAAERD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + W +H+V C + I +
Sbjct: 121 EQGYRLPRAD---------RPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ + DDAIC P P + T+
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALRRPARQIMITNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ +W D + + TI
Sbjct: 232 LRSYSCAFKIGTETWDDVEDVTVTGCTI 259
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 27/268 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DF DG DTA +Q A+D A G + + P G Y + + L S L++
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIAAAGGGR---LTLPAGRYRSGCLNLPSDFELHLE 60
Query: 74 EDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L+ R+ DY E S ++ A ++ I+G G +DG + + +
Sbjct: 61 AGAVLIASQRLADYQAVQALSCAEKSHNVLLYALGQRNITISGTGRIDGDGEAWFAAERD 120
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + RPR++ F C V + + + W +H+V C + I +
Sbjct: 121 EQGYRLPRAD---------RPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSW 240
+I PN D +DI+ ++ + DDAIC P P + T+
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALRRPARQIMITNCL 231
Query: 241 IRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+ S A K+G+ +W D + + TI
Sbjct: 232 LRSYSCAFKIGTETWDDVEDVTVTGCTI 259
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 7 LSTTHIHIHSVI--DFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATI 62
S + HS I DFGA GDG +T A + AI + Q+ PPG++LT +
Sbjct: 35 FSALNCRKHSAILTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSF 94
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLA-ENATDVGI 107
L SH TL I AT+L ++P + R+ +++ N TDV I
Sbjct: 95 NLTSHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVI 154
Query: 108 TG-GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
TG G ++GQ + W+ RP L+ L +N+ + N+ L
Sbjct: 155 TGNNGTINGQGQYW-------------WDKFKKKQFKLTRPYLIELLFSKNIQISNITLI 201
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H V C+N ++ +++ PN DGI+ + NT+I I +GDD I K+
Sbjct: 202 DSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKS 261
Query: 227 --------YTGPLYNLTATD-SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ P L+ + I KS+ + LGS K + +++T+
Sbjct: 262 GWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTL 312
>gi|312127381|ref|YP_003992255.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311777400|gb|ADQ06886.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 454
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 21/253 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAK DG+ + T AIQ AID C N V P G YL+ IRLKS+VTL + E A
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAIDTCFE-NGGGVVVIPAGIYLSRPIRLKSNVTLYLEEGA 74
Query: 77 TLLGGPRIEDYPE---ESSRWYVVL----AENATDVGITGGGVVD---GQAMKFVVTKNE 126
+ IED+ + + W V A N ++ + G G +D M F N+
Sbjct: 75 VIKATNNIEDFYQIGYYHNEWGEVTSFLSAMNEKNIAVEGKGTIDLSGSSFMDFSRAFNQ 134
Query: 127 IKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ +S EC+P + + F C N+++ + + + W + I
Sbjct: 135 FEE--LSQLDKEQFEETECKPIYRPNQPIFFYNCENISLSGISIIDSPCWTVCIHSSKYI 192
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTATD 238
++ I + PN+DGI + N +IT GDD + T P N+ ++
Sbjct: 193 KAHNIRIINNLRVPNSDGIHLCSCENVIITDSFFTCGDDCVAISGITNWDKPCENIIVSN 252
Query: 239 SWIRTKSSAIKLG 251
++T+S+A+++G
Sbjct: 253 CIMQTRSAAVRMG 265
>gi|146295704|ref|YP_001179475.1| glycoside hydrolase family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409280|gb|ABP66284.1| glycoside hydrolase, family 28 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 454
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 22/270 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAK DG+ + T AIQ AID C N V P G YL+ IRLKS+VTL + E A
Sbjct: 16 VTDFGAKPDGLSFCTEAIQKAIDTCFE-NGGGVVVIPAGIYLSRPIRLKSNVTLYLEEGA 74
Query: 77 TLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVD---GQAMKFVVTKNE 126
+ IEDY + + W + A N ++ I G G +D M F N+
Sbjct: 75 VIKATNNIEDYYQIGYYHNEWGEVTSFLYAMNEKNIAIDGKGTIDLSGSSFMDFSRAFNQ 134
Query: 127 IKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ +S EC P + + F C N+ + + + + W + I
Sbjct: 135 FEE--LSQLDKEQFEETECNPIYRPNQPIFFYNCENICLSGISIIDSPCWTVCIHSSKYI 192
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTATD 238
+ ++ I + PN+DGI + N +IT GDD + T P N+ ++
Sbjct: 193 KVHNIRIMNNLRVPNSDGIHLCSCENAIITDSFFTCGDDCVAISGITNWDKPCENIIVSN 252
Query: 239 SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
++T+S+A+++G K ++ N+TI
Sbjct: 253 CIMQTRSAAVRMGHLDS-KVKNVIASNLTI 281
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 123/267 (46%), Gaps = 46/267 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGA GDG +T A + A+ A +K Q+ PPG +LTA L SH+TL +
Sbjct: 78 NLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 74 EDATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDG 115
E A +LG I+D P S Y ++ +N DV ITG G +DG
Sbjct: 138 EGAVILG---IQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIDG 194
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + K + ++ NHT R LV + ++ N+ LR+ +W LH
Sbjct: 195 QGQTW--WKKYRQKLL---NHT--------RGPLVQIMWSSDIVFTNITLRDSPFWTLHP 241
Query: 176 VRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
C N IR+++I F PN DGID + + VI I GDDAI K+
Sbjct: 242 YDCKNVTIRNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 301
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGS 252
Y P N+ + +R+ SA I +GS
Sbjct: 302 YGRPSTNILIRNLVVRSMVSAGISIGS 328
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 125/299 (41%), Gaps = 38/299 (12%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L LS+ ++V+ +GA+ D T AI+ AIDA V FP G+YLT I
Sbjct: 29 LSFGLSSNAQSYYNVLKYGARNDSSKLATQAIKKAIDAASKAGG-GTVYFPAGKYLTGAI 87
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVV---------LAENATDVGITGGGV 112
LKS++T+ I A L +DY P SR+ V A A ++ ITG G+
Sbjct: 88 HLKSNITIFIDAGAELHFSDNFDDYLPMVKSRYEGVDVTSFSPLFYAYKAENIAITGRGI 147
Query: 113 VDGQAMKF--VVTKNEIKNVMVSWNHTGACSGDE--------------CRPRLVGFLGCR 156
+DG K+ V + W + E RP + + C+
Sbjct: 148 IDGHGKKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCK 207
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY--GDFNTPNNDGIDIEDSNNTVITRVQ 214
NV + + +R +W ++ C+N I ++I G F PN DGI+ E NN I+
Sbjct: 208 NVFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSF-APNTDGINPESCNNVHISNCH 266
Query: 215 IDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
I GDD I K+ P N T T+ + + + +GS D + + N
Sbjct: 267 ISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGVVIGSEMSGDVRKISISN 325
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 50 VRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRW---------YVVLAE 100
V P GE+LT + LKS+V L++ A L +DYP SRW + A+
Sbjct: 34 VVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVVHSRWEGVHRKVYASCIYAQ 93
Query: 101 NATDVGITGGGVVDGQAMKFVVT-KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVN 159
N ++ +TG G +DG K+ T +NE N+ RP+L+ F C +
Sbjct: 94 NVENISVTGFGTLDGNGKKWWHTFRNEPDNLAYP------------RPKLMSFHNCHRIT 141
Query: 160 VWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGD 219
V +++L + W ++ + C N +++I ++PN DGID E N I+ ID GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 220 DAICPKTYTGPLY------NLTATDSWIRTKSSAIKLGS 252
D I K T Y N+T T+ + + LGS
Sbjct: 202 DCIAIKAGTEDTYERIACENITITNCTMVHGHGGVVLGS 240
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G + AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEIFCHEAINLAILTCSQAGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++ ITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIAITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN +N ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G + AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEIFCHEAINLAILTCSQAGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++ ITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIAITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN +N ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI--DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
SV +FGA GDG+ +TAA Q A+ G ++ P G +LT + L S TL +H
Sbjct: 80 SVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSRFTLFLH 139
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQAM 118
A +LG E++P E ++ L ++ DV ITG G +DGQ
Sbjct: 140 HGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTIDGQGR 199
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R L+ + NV + NV LR +W +H V C
Sbjct: 200 MWW---------ELWWNRTL----NHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYC 246
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N I+D++I N PN DGID + S+ I I++GDD + K+
Sbjct: 247 RNVVIKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 294
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 30/238 (12%)
Query: 6 LLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF--PPGEYLTATIR 63
L S H S+ +FGA GDG+ +T A Q+A+ + + P G++LT +
Sbjct: 34 LASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFD 93
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG 109
L SH+TL + + AT+LG E++P E R + ++ +N TDV ITG
Sbjct: 94 LISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITG 153
Query: 110 -GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
G +DGQ +V W G + RP LV + + + N+
Sbjct: 154 ENGTIDGQG-----------SVWWDWFRNGEL--NYTRPHLVELMNSTGLIISNLTFLNS 200
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C + +++++I +PN DG+D + S N I I TGDD + K+
Sbjct: 201 PFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKS 258
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG +T A + A+ Q+ P G +L+ + L S+ TL
Sbjct: 71 VMSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNFTLF 130
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ A +LG ++++P ++ +N T+V ITG G +DGQ
Sbjct: 131 LQRGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQ 190
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T R L+ C N+ + N+ L +W +H V
Sbjct: 191 GKMWW---------ELWWNRTLV----HTRGHLIELKNCHNILISNLTLLNSPFWTIHPV 237
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N IR+M+I N PN DGID + S N I I++GDD I K+
Sbjct: 238 YCSNVVIRNMTILAPINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKS 287
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
+ ++ DFG GDG +T A + A I + + Q+ P G +LTA L SH+TL
Sbjct: 50 VFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTL 109
Query: 71 NIHEDATLLGG------PRIEDYPE-------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ EDAT+L P ++ P R+ ++ ++ D+ ITG G +DG
Sbjct: 110 FLEEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDG 169
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
K+ W R RL+ F+ R + + +V LR +W +H
Sbjct: 170 NGRKW-------------WEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHP 216
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
C+N IR ++I + PN DGID + N +I I GDD + K+ Y
Sbjct: 217 YDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDY 276
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+T + + SA + +GS + +N+ I
Sbjct: 277 GKPCANITIRNIQVNAPVSAGVSIGSEMSGGITNVTVENVYI 318
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G + AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEIFCHEAINLAILTCSQAGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++ ITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIAITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN +N ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 99/230 (43%), Gaps = 38/230 (16%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGA GDG + DTA IQ+AI+ACP K VR P G YLT + L+S ++L + A LL
Sbjct: 89 FGALGDGKNDDTACIQAAIEACP---KDGTVRIPKGRYLTRPLFLRSGLSLWLDRGAVLL 145
Query: 80 GGPRIEDYPE-----------------------ESSRWYVVLAENATDVGITGGGVVDGQ 116
G P E YP E+S ++ +V I G G VDG
Sbjct: 146 GDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNVDIFGEGTVDGN 205
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
A + W RPR + CR + + V +R W +H
Sbjct: 206 ADR------------SDWWEEHKTKRGAWRPRTIFLCRCRCIRIQGVLVRNSPSWTIHPY 253
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
D + +++I+ ++PN DG D E + ++ +I GDD I K+
Sbjct: 254 YTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKS 303
>gi|344995464|ref|YP_004797807.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963683|gb|AEM72830.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 446
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 21/256 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I + GAK DGI + AIQ AID C +V P G YL+ I LKS+VTL +
Sbjct: 2 IIDITQLGAKPDGITFCEGAIQKAIDMCHEKGGG-KVIVPAGVYLSRPIELKSNVTLYLE 60
Query: 74 EDATLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVDGQAMKFVVTK-- 124
E ATL P IEDY + + W + A N ++ I G G +D F+
Sbjct: 61 EGATLKASPHIEDYFKIGYYHNEWGDVTSFLFAMNQKNISIDGKGTIDLSGSSFMDFSQA 120
Query: 125 ----NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW--CLHIVRC 178
+E++N+ C + + F C N+N+ V + + W C+H R
Sbjct: 121 FNIFDELQNLTPEQFEETECKPKHRPNQPIFFYNCENINLSGVSIIDSPCWTVCIHSSRY 180
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLT 235
+ + I + PN+DGI + N +IT GDD + T N+
Sbjct: 181 IK--VNSIKIVNNLRVPNSDGIHLCSCENVMITNSFFVCGDDCVALSGITNWEKSCENVI 238
Query: 236 ATDSWIRTKSSAIKLG 251
++ ++T+SSA+++G
Sbjct: 239 VSNCIMQTRSSALRMG 254
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATI 62
L S H S+ DFGA GDG +T A Q+A+ K Q+ P G +LT +
Sbjct: 50 LTASVERPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSF 109
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGIT 108
L SH+TL++ +DA +LG D+P ++ N TDV IT
Sbjct: 110 SLISHLTLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIIT 169
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G +DGQ V W H + RP LV + V + N+
Sbjct: 170 GSNGTIDGQGA-----------VWWDWFHNHTL--NYTRPPLVELMYSTRVVISNLTFIN 216
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C + ++I ++PN DGID + S N I I GDD + K+
Sbjct: 217 SPFWNIHPVYCSQVLAQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKS 275
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 110/267 (41%), Gaps = 44/267 (16%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAKGDGI DT IQ+AI ACP ++ V P G Y ++ LK +V + + E A
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAIMACPEKSR---VLIPAGTYRIVSLFLKDNVNIELAEGA 140
Query: 77 TL----------LGGPRIEDYPEESS----RWY---------VVLAENATDVGITGGGVV 113
L + I+ Y E+ W ++ N + I G G++
Sbjct: 141 VLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIYGQGII 200
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG A +W H CRPR++ CR V V + +R W +
Sbjct: 201 DGNA----------GTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNI 250
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-------- 225
H D+ D+ + ++PN DG+D E + I V GDD I K
Sbjct: 251 HPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGS 310
Query: 226 TYTGPLYNLTATDSWIRTKSSAIKLGS 252
TY P N++ +R ++ +GS
Sbjct: 311 TYKCPSKNISIRRCCMRDGHGSVTIGS 337
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIH 73
++++ FGA+ + AI +AI C QV PPG+Y + I KS+V L +
Sbjct: 49 YNILHFGAQKGAVKDSRPAINTAITKCS-DEGGGQVTVPPGKYFIKGPIIFKSNVNLYLS 107
Query: 74 EDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT 123
E A L+ +DY P +RW ++ A ++ ITG G+++GQ K +
Sbjct: 108 EGAELIFSHDEKDYLPAVLTRWEGTEVFNYSPLIYAYQVENIAITGKGILNGQGSKNIAN 167
Query: 124 -KNEIKN---VMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
K E K ++ GA + RP + L CRN+ + VR+ + +W
Sbjct: 168 WKPEQKKDQALIRKMGREGAPVYNRLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWV 227
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + C+N +R++SI FN N+DG D E + N ++ TGDD I K+
Sbjct: 228 IHPIGCNNVTVRNVSI-DSFNA-NSDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDG 285
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ +S + +S + +GS + + +NI I
Sbjct: 286 WRIGQPTENIIVRNSTFESLASGVCIGSEISGGVRNVFIENIKI 329
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 30/238 (12%)
Query: 6 LLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF--PPGEYLTATIR 63
L S H S+ +FGA GDG+ +T A Q+A+ + + P G++LT +
Sbjct: 34 LASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFD 93
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG 109
L SH+TL + + AT+LG E++P E R + ++ +N TDV ITG
Sbjct: 94 LISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITG 153
Query: 110 -GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
G +DGQ V W G + RP LV + + + N+
Sbjct: 154 ENGTIDGQG-----------TVWWDWFRNGEL--NYTRPHLVELMNSTGLIISNLTFLNS 200
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C + +++++I +PN DG+D + S N I I TGDD + K+
Sbjct: 201 PFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKS 258
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 44/233 (18%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG+ DTAA+Q+A+ ACPPG VR G YL+A + LKS + + + E A +L
Sbjct: 83 FGAKGDGVSDDTAALQAALMACPPGG---LVRLEAGRYLSAPLFLKSDMAVELCEGAHIL 139
Query: 80 GGPRIEDYPE--------------------------ESSRWYVVLAENATDVGITGGGVV 113
G I +P + + ++ A+N V I G GV+
Sbjct: 140 GHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQN---VQIYGRGVM 196
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
D QA F K + W RPRL+ + C V + + L+ W +
Sbjct: 197 DAQA-GFDTWWERPKARFIGW-----------RPRLIFMVECEQVILQGMTLKNSPSWTV 244
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H + D+ I ++PN DG++ E S + VI+ V GDD I K+
Sbjct: 245 HPLFSRGLTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKS 297
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +FGAKGDG T A + AID C +V PPG YLT I LKS+V L+I E
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAIDRCTNAGG-GRVVVPPGSYLTGAIHLKSNVDLHISEGT 115
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
T+ +DY P SRW + A T++ ITG G ++GQ+
Sbjct: 116 TVKFSQNPKDYLPVVFSRWEGVEVFNYSPFIYAFEQTNIAITGKGTLNGQSDNEHWWPWN 175
Query: 118 -------MKFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNV 163
+ + + +N + + G G RP+ + C NV + V
Sbjct: 176 GRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYLRPQFIQPYRCENVLIEGV 235
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC 223
+R W +H V C N ++++ I + + PNNDG + E + +I DTGDD I
Sbjct: 236 TIRNSPMWEIHPVLCRNVIVQNVII--NSHGPNNDGCNPESCTDVLIKDCDFDTGDDCIA 293
Query: 224 PKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
K+ P N+ T ++ I +GS
Sbjct: 294 IKSGRNADGRRLKAPTENIIVTGCRMKDGHGGITVGS 330
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GA GDG +TAA ++ I AC QV P G +LT I L+S V L++ A
Sbjct: 70 ITDYGAVGDGRTMNTAAFRATIAACHRAGG-GQVVVPEGRFLTGAIHLRSRVNLHVTAGA 128
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------M 118
T+ P D+ P +RW + A A DV +TG G +DGQA
Sbjct: 129 TIAFSPDPRDFLPVVLTRWEGTECYNYSPFIYAYGARDVAVTGPGTLDGQARLGPWESWY 188
Query: 119 KFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+ + + ++ TGA G RP++V F CRNV V ++ + +P W
Sbjct: 189 RDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQFYRCRNVLVSDLTIVDPPMW 248
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V N +R +++ D N DG D E ++ +IT + +T DD + K+
Sbjct: 249 TVHPVLSSNVTVRGVTV--DSTLYNTDGCDPECCSDVLITGCRFNTNDDCVAVKS 301
>gi|397659328|ref|YP_006500030.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394347522|gb|AFN33643.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 452
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 23/258 (8%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DGI DT Q A+D V G+Y +R+ S+ L + A L+
Sbjct: 12 ADGITRDTEIFQKALDTLSQAGGGTLV-VESGKYYLGGLRMGSNTCLWLSPGAELIVSDN 70
Query: 84 IEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
D+ + E S + A++A ++ I GGG + G A + + S +
Sbjct: 71 YADFTQAVALSRAECSDRAFLYAQDAENISICGGGTIYGNADGWFSS---------SVDD 121
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
G + E RPR++ C+ V + N+ + W +H+V C I +++ D N
Sbjct: 122 MGYRTPAEQRPRMILLENCQRVRLENICIHHAPMWTIHLVSCSQVVIDGITVDNDLTMAN 181
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSWIRTKSSAIKL 250
D +DI+ + DDAIC P PL +T + +R+KS A K+
Sbjct: 182 TDALDIDSCQQVHVANSFFSAADDAICLKTTDKPAAIQRPLRQVTIVNCTLRSKSCAFKI 241
Query: 251 GSASWFDFKALVFDNITI 268
G+ +W D + +V N TI
Sbjct: 242 GTETWQDIEDIVVSNCTI 259
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 108/261 (41%), Gaps = 53/261 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ ++G GDGI +T + AI+ V P G +LT IRLKSH+ L++ ++
Sbjct: 37 SLTEYGGVGDGITLNTECFREAIEHLSAKGGGTLV-VPTGIWLTGPIRLKSHIELHLEKN 95
Query: 76 ATLLGGPRIEDYPEESSRWYVVL---------AENATDVGITGGGVVDGQAMKFV-VTKN 125
A L+ YP S+ + V A N +D+ ITG GV+DG + V KN
Sbjct: 96 ALLIFTSDFWSYPSRSTFFTEVFYRQLQSPISAYNESDIAITGEGVIDGSGQDWRPVRKN 155
Query: 126 EIKNVMVSWNHTGACSG----------------------------------------DEC 145
++ + W H SG D
Sbjct: 156 KV--TVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNTPDEWVRLKDYV 213
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ C V + V + +W LH C + + + + +N+ N DG+DIE
Sbjct: 214 RPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDGLDIESC 273
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N ++ + D GDDA+C K+
Sbjct: 274 QNVLVVQSTFDVGDDAVCIKS 294
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PE 89
T ++++AI AC + +V P GEY TA I L S+V L++ + A L EDY P
Sbjct: 566 TESLKAAIQACHT-DGGGRVVIPKGEYYTAAIHLLSNVNLHLEKGAVLRFLTSPEDYLPV 624
Query: 90 ESSRWY---------VVLAENATDVGITGGGVVDGQAMK-------------FVVTKNEI 127
SRW ++ A T+V ITG G +DGQA + T+ ++
Sbjct: 625 VVSRWEGVDCRTLSPLIYANGQTNVAITGAGTLDGQASRDNWWSWKGRKSSSEQNTEAKV 684
Query: 128 KNVMVSWNHTGACSGDE--------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ W S DE RP + F C V V V + +W LH +
Sbjct: 685 GKDKLLWMEQNRISLDERIFSVNDKLRPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSK 744
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TYTGPL 231
N +R + D + PNNDG D E N +I + GDD + K T+ P
Sbjct: 745 NVIVRGVKF--DSHGPNNDGCDPESCENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPS 802
Query: 232 YNLTATDSWIRTKSSAIKLGS 252
N+ + +R + + +GS
Sbjct: 803 RNIIVRNCIMRDGHAGVAVGS 823
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 38/245 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA GDG + AI+SAI AC +V PPG+Y T I L+S+V L++ +DA
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAIQACAEAGG-GKVVVPPGDYPTGPIYLESNVNLHLEKDA 118
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
L+ +DY P +RW +V A ++ ITG G++DGQA
Sbjct: 119 RLMFSTDPKDYLPLVYTRWEGVELMNYSPLVYAFEEENIAITGEGILDGQANETNWWPWK 178
Query: 118 --MKFVVTKNEIKNVMVSWNHT--------------GACSGDECRPRLVGFLGCRNVNVW 161
++ T+ + + H G RP+ V C+NV V
Sbjct: 179 GKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQFVQPYRCKNVLVE 238
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
V++ W L+ V C+N I +++ + + PN+DG D E S N +I +TGDD
Sbjct: 239 GVKIVNSPMWILNPVLCENVTIEGVTV--ESHGPNSDGCDPESSKNVLIKDCYFNTGDDC 296
Query: 222 ICPKT 226
I K+
Sbjct: 297 IAIKS 301
>gi|402845566|ref|ZP_10893902.1| pectate lyase family protein [Klebsiella sp. OBRC7]
gi|423104224|ref|ZP_17091926.1| hypothetical protein HMPREF9686_02830 [Klebsiella oxytoca 10-5242]
gi|376384087|gb|EHS96813.1| hypothetical protein HMPREF9686_02830 [Klebsiella oxytoca 10-5242]
gi|402270847|gb|EJU20104.1| pectate lyase family protein [Klebsiella sp. OBRC7]
Length = 452
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 23/258 (8%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DGI DT Q A+D V G+Y +R+ S+ L + A L+
Sbjct: 12 ADGITRDTEIFQKALDTLSQAGGGTLV-VESGKYYLGGLRMGSNTCLWLSPGAELIVSDN 70
Query: 84 IEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
D+ + E S + A++A ++ I GGG + G A + + S +
Sbjct: 71 YADFTQAVALSRAECSDRAFLYAQDAENISICGGGTIYGNADGWFSS---------SVDD 121
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
G + E RPR++ C+ V + N+ + W +H+V C I +++ D N
Sbjct: 122 MGYRTPAEQRPRMILLENCQRVRLENICIHHAPMWTIHLVSCSQVVIDGVTVDNDLTMAN 181
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSWIRTKSSAIKL 250
D +DI+ + DDAIC P PL +T + +R+KS A K+
Sbjct: 182 TDALDIDSCQQVHVANSFFSAADDAICLKTTDKPAAIQRPLRQVTIVNCTLRSKSCAFKI 241
Query: 251 GSASWFDFKALVFDNITI 268
G+ +W D + +V N TI
Sbjct: 242 GTETWQDIEDIVVSNCTI 259
>gi|448419208|ref|ZP_21580299.1| glycoside hydrolase family 28 [Halosarcina pallida JCM 14848]
gi|445675521|gb|ELZ28051.1| glycoside hydrolase family 28 [Halosarcina pallida JCM 14848]
Length = 535
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 120/288 (41%), Gaps = 36/288 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
HS + DG DT A Q AIDAC G V P GE++ TI L+SHVTL +
Sbjct: 4 HSTVSVREYDDGAETDTDAFQRAIDACADGGG-GTVSVPAGEFVVGTIHLRSHVTLELVA 62
Query: 75 DATLLGGPRIEDYPEE-----SSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK- 128
AT+ E Y ++ R ++V A+ +V I G G DG+ +F++ I+
Sbjct: 63 GATVFAAFGEEAYDDDRIGPDGERPFLV-ADGVENVAIEGRGTFDGRGTEFMLMDTPIRG 121
Query: 129 -------NVMVSWNHTGACSGDECRPRLVG------------------FLGCRNVNVWNV 163
+ +VS A G+ R G F C NV V V
Sbjct: 122 HSDESGTHPLVSNGAHRARQGESYLDRSAGTDEWPVAKPDFRPGPMFLFEDCENVLVRGV 181
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC 223
LR+ W + + D I + I PN DG+ + +S N ++ I DDAI
Sbjct: 182 TLRDMPAWTVSVHDTDEVDIVGVDIDNHLRIPNCDGVSVMNSRNVHVSDCTIRACDDAIT 241
Query: 224 PKTYTG---PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
T P +T T+ + + + AIK GS + D + F+N +
Sbjct: 242 VGTRAESDRPTEGVTVTNCTLTSSACAIKFGSETARDVRNCTFENCVV 289
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 40/280 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFG GDG+ +T A + A+ A K Q+ PPG +LTA L SH+TL +
Sbjct: 75 NLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLA 134
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
EDA +LG P + P E Y ++ ++ DV ITG G ++GQ
Sbjct: 135 EDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQ 194
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W + R LV + ++ + N+ LR+ +W +H C
Sbjct: 195 SW-------------WKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDC 241
Query: 179 DNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
N I+ ++I F PN DGID + + +I I GDDAI K+ Y
Sbjct: 242 KNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGR 301
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA I +GS + +N+ I
Sbjct: 302 PSMNIMIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLLI 341
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+IDFGA GDG +T A + A+ + ++ P G +LT +IRL SH+TL +
Sbjct: 86 SIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHLTLFLE 145
Query: 74 EDATLLGGPRIEDYPE-------------ESSRWYVVL-AENATDVGITGG-GVVDGQAM 118
AT+LG DYP SR+ ++ + DV ITG G +DGQ
Sbjct: 146 SGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTIDGQGA 205
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V W+ + + + R L+ + +++ + N+ + +W +H V
Sbjct: 206 -------------VWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYS 252
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++ ++I N+PN DGID + S I I GDDAI K+
Sbjct: 253 KNVVVKRVTILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKS 300
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFGA GDG +T A Q+AI Q+ P G +LT + L SH+TL
Sbjct: 60 HSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHLTL 119
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDG 115
+ E A +LG + ++P E ++ L +N DV ITG G +DG
Sbjct: 120 FLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTIDG 179
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q +V W H D R LV + R++ + NV + +W +H
Sbjct: 180 QG-----------SVWWDWFHNKTL--DFTRGHLVELIDSRHITISNVTFKNSPFWTIHP 226
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C + I+D++I PN DGID + S+N I I TGDD I K+
Sbjct: 227 VYCSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKS 277
>gi|284040211|ref|YP_003390141.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283819504|gb|ADB41342.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 442
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 96/229 (41%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G D T AIQ ID N V P G +++ + K L++ E
Sbjct: 53 YVITDYGVGSDSTRVQTEAIQKVIDLAA-RNGGGIVVIPKGTFMSGALFFKPKTHLHLAE 111
Query: 75 DATLLGGPRIEDYPEESSRW------YVVLAENATDVG---ITGGGVVDGQAMKFVVTKN 125
A L G I DYP+ SR Y NA V I+G G +DG ++F
Sbjct: 112 GAVLKGSNDIADYPKLPSRMEGQNLDYFAALVNAYQVDGFTISGKGTIDGNGLRF----- 166
Query: 126 EIKNVMVSWNHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ C+ E RPRLV C NV V +V+L +W H +C N +
Sbjct: 167 -WEAFWARRKENPNCTNLEVSRPRLVFIWKCNNVQVQDVKLHNAGFWTSHYYQCTNVKVL 225
Query: 185 DMSIYGDF---NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
D IY + P+ D IDI+ +N +I + DDAI K GP
Sbjct: 226 DAHIYSPYKPVKAPSTDAIDIDACSNVLIKGCYMSVNDDAIALKGGKGP 274
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFGA GDG +T A ++AI N Q+ P G +LT +I L SH+TL
Sbjct: 3 HSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHLTL 62
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRWYVVLAENA-TDVGITG-GGVVDG 115
+ AT+LG DYP R+ ++ N DV ITG +DG
Sbjct: 63 FLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATIDG 122
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q V W+ + + R ++ + +N+ + N+ + +W +H
Sbjct: 123 QGA-------------VWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHP 169
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++ ++I F+ PN DGID + S + I I GDDAI K+
Sbjct: 170 VYCKNVVVKSLTILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKS 220
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A ++AI + Q+ PPG++LT + L SH TL
Sbjct: 30 HSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGSFNLSSHFTL 89
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H+DA LL ++P E + R+ ++ + TDV +TG G +DG
Sbjct: 90 FLHKDAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTIDG 149
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q V W+ RP L+ FL V + N+ L W +H
Sbjct: 150 QG-------------AVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHP 196
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+ ++I ++PN DGI+ + S+N I + +GDD I K+
Sbjct: 197 TYCSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKS 247
>gi|209547361|ref|YP_002279279.1| polygalacturonase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209538605|gb|ACI58539.1| putative polygalacturonase protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 454
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
+T +Q+AID ++ G ++ +RL+S V L++ A L P Y
Sbjct: 16 NTDRLQAAIDDLSASGGG-RLELLAGIHICRGLRLRSGVDLHLTAGAILRPVPDYAAYAH 74
Query: 89 -------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A+ A +G+TG G ++ F++ +E +
Sbjct: 75 TSVSVIAEKSDRGMIV-AKGARRIGLTGPGRIEAGCESFIIGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V F GC V + + + W LH V C + +R+++I D PN DGI
Sbjct: 127 --EFRPRVVVFEGCDEVEISALHISRSPMWTLHFVDCTDVAVRNVTIDNDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCTISTADDGICLKTSIGPQGVAIGRCENIVIRRCAVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D +VF++ ++
Sbjct: 245 HGDVTNVVFEDCSV 258
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG D+ IQ+AI+ACP K V P G+YL + LKS++ + I +D
Sbjct: 84 NVKDFGALGDGSGLDSGYIQAAINACP---KDGTVYIPKGKYLCTPVFLKSNIDIWIDKD 140
Query: 76 ATLLGGPRIEDYP---------EESSRWYV--------------VLAENATDVGITGGGV 112
A L+G + YP +E + + + + +V I G G+
Sbjct: 141 AILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYGEGI 200
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A M+ W RP V C+N+ + + + W
Sbjct: 201 LDGNAS------------MLDWWKDAKKKNIAWRPNTVFLHNCKNIAMQGLCIMNSPSWT 248
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H DN + +I N+PN DG+D E N +I I GDD + K+
Sbjct: 249 VHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMA 308
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
+ P N+ +S R ++ +GS
Sbjct: 309 LKHYKPAKNIVIRNSIFRKGHGSVTIGS 336
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 19 DFGAK---GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
DFGAK D + T AI AIDA V P G++LT + LKS++ L++ ++
Sbjct: 70 DFGAKEMDADKTNKCTDAIHKAIDAASESGG-GTVLVPAGQWLTGPVHLKSNINLHLEKN 128
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVV--- 122
A+L DY P R+ ++ A N T+V ITG G ++GQ ++
Sbjct: 129 ASLFFSEDKTDYLPVVPQRYEGVEVYNYSPLIYAANVTNVSITGKGTLEGQGQHWLEWGT 188
Query: 123 ---TKNEIKNVMVSWNHTGACSGDE-CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
N K + + G +G E RP V F +N+ V + L E W +H+V
Sbjct: 189 VQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITLNESPMWNIHLVYS 248
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N +RD+++ ++ N DG+ ++ S++ ++ Q+ TGDDAI K+
Sbjct: 249 QNAIVRDITV-NSLDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLKS 295
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A Q+AID + Q+ PPG++LT + L SH TL
Sbjct: 51 HEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGG------PRIEDYPE-------ESSRWY-VVLAENATDVGITGG-GVVDG 115
+ +DA LL P IE P E R+ ++ N TDV ITG G +DG
Sbjct: 111 FLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGANGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + RP L+ + N+ + N+ L W +H
Sbjct: 171 QGDLW-------------WKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++ ++I N+PN DGI+ + NT I I +GDD + K+
Sbjct: 218 TYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 31/235 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GAK G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 344 ITDYGAKSGGETDNTKAIAAAIEACYKAGG-GRVVVPDGIWLTGPIHFKSNVNLYLEENA 402
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L +DY P + W ++ A +V I+G G +
Sbjct: 403 VLSFSDNPKDYLPAVMTSWEGLECYNYSPLLYAFECENVAISGKGTLQPKMGTWRVWFKR 462
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK V V A + RP L+ F C+N+ + R+RE +
Sbjct: 463 PQPHLEALKELYTKAST-GVPVE-ERQMAVGENNLRPHLIHFNRCKNIQLEGFRIRESPF 520
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W +HI CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 521 WTIHIYMCDGGVVRNLDVRA--HGHNNDGIDFEMSKNFLVENCSFDQGDDAVVIK 573
>gi|405377398|ref|ZP_11031340.1| endopolygalacturonase [Rhizobium sp. CF142]
gi|397326029|gb|EJJ30352.1| endopolygalacturonase [Rhizobium sp. CF142]
Length = 432
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 24/250 (9%)
Query: 27 IHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL-------- 78
+ D A +Q +ID + G ++T IRL S +TL+I ATL
Sbjct: 5 VEPDGAELQQSIDRLV-STGGGTLLLQAGRHITGPIRLFSGITLSIGPGATLEFVPDYAL 63
Query: 79 LGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
G + E S R Y+V A+ A DV I G G + F +E G
Sbjct: 64 YAGNSVSVIAEGSDRAYIV-AQEAHDVAIVGEGKILASGGAFSTGFDET---------VG 113
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
+ E RPR++ F C + + + + W +H+VRC + + ++++ + PN D
Sbjct: 114 TYTPSEKRPRVLVFEDCSKIRLGGFVIEDSPMWTVHLVRCRDVIVEGIAVFNNRQLPNTD 173
Query: 199 GIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-----LYNLTATDSWIRTKSSAIKLGSA 253
GI I+ + RV I T DD +C KT + +D + + S A+K+G+
Sbjct: 174 GIVIDSCAKVAVRRVIIKTADDGVCLKTSRSEKGIARCAEIEVSDCLVESNSCALKIGTE 233
Query: 254 SWFDFKALVF 263
S+ D + + F
Sbjct: 234 SFGDIRDVAF 243
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T A Q+AI + ++ P G +LT + L SH+TL
Sbjct: 51 HSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTL 110
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDG 115
+ ++A +LG +D+P ++ N TDV ITG G +DG
Sbjct: 111 WLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITGDNGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W S + RP LV + + + N+ +W +H
Sbjct: 171 QGS-------------IWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V C +++++I ++PN DGID + S++ I I TGDD I K+ Y
Sbjct: 218 VYCSKVIVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILY 277
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGS 252
P N+T +T+SSA I +GS
Sbjct: 278 GRPCRNITIRRLVGQTRSSAGIAIGS 303
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++D+GA GD + +TA + A N ++ PPG +++ T L SHVTL +
Sbjct: 57 NIVDYGAVGDNVTVNTAVFNKIV-ALVAANGDGEIYIPPGIFVSGTFNLTSHVTLRLASG 115
Query: 76 ATLLGGPRIEDYP-------------EESSRWY--VVLAENATDVGIT---GGGVVDGQA 117
A L G P D+ ES Y +V EN DV IT G GV+DG
Sbjct: 116 AVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSDNGQGVIDGNG 175
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
M + W A + R LV + ++ + NV LR +W +H
Sbjct: 176 MGW-------------WAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYS 222
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNL 234
N + +++I ++PN DG D + N VI GDD I K+ G Y +
Sbjct: 223 STNVLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGV 282
Query: 235 TATDSWIRT------KSSAIKLGS 252
TD IR S+AI +GS
Sbjct: 283 PTTDVVIRNMTMHTPTSAAIAIGS 306
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 102/234 (43%), Gaps = 25/234 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFGA G H TAA + AI+ +V P GE+LT I L+S+V L++
Sbjct: 74 SITDFGADPTGEHLSTAAFRDAIEEVSAAGG-GRVVIPAGEFLTGAIHLRSNVELHVGSG 132
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK------ 119
A + + Y P +RW + A +V ITG GV+DGQA +
Sbjct: 133 AVVRFSQNPDHYLPAVYTRWEGVELYNYSPFIYARGVENVAITGSGVLDGQADEKHWWNW 192
Query: 120 FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
T+ E + + G +G RP V F RN+ V V L+ W
Sbjct: 193 SGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFYDSRNILVQGVTLKNSPMWM 252
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V N + D + PNNDG++ E S + VI + D GDD I K+
Sbjct: 253 IHPVLSHNITV-DGVVLDSPEGPNNDGVNPESSRDVVIKNSRFDNGDDCIAIKS 305
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGA G +T AI +AIDAC +V P G +LT + KS+V L + ED
Sbjct: 53 KITDFGAVPGGEVDNTKAIAAAIDACNKAGGG-RVVVPAGIWLTGPVHFKSNVNLCLEED 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG---------- 115
A L EDY P + W ++ A +V I+G G +
Sbjct: 112 AVLSFTDNPEDYLPAVMTSWEGLECYNYSPLLYAFECENVAISGKGTLQPKMGTWKVWFK 171
Query: 116 ------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
QA+K + TK NV V A + RP L+ F C+NV + ++RE
Sbjct: 172 RPAPHLQALKELYTKAST-NVPVIERQM-ATGENHLRPHLIHFNRCKNVMLDGFKIRESP 229
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 230 FWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 7 LSTTHIHIHSVI--DFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATI 62
S + HS I DFGA GDG +T A ++AI + Q+ PPG++LT +
Sbjct: 35 FSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSF 94
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRW-YVVLAENATDVGI 107
L SH TL I AT+L ++P + R+ ++ N TDV I
Sbjct: 95 NLTSHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVI 154
Query: 108 TG-GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
TG G ++GQ + W+ RP L+ L +N+ + N+ L
Sbjct: 155 TGNNGTINGQGQYW-------------WDKFKKKQFKITRPYLIEILFSKNIQISNITLI 201
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H V C++ ++ +++ PN DGI+ + NT+I I +GDD I K+
Sbjct: 202 DSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKS 261
Query: 227 --------YTGPLYNLTATD-SWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ P L+ + I KS+ + LGS K + +++T+
Sbjct: 262 GWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTL 312
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT +IQ+AI +CP G + V F G YLT + LKS++TL + +
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAIISCPDGGR---VFFHEGIYLTYPLFLKSNITLELGKG 141
Query: 76 ATLLGGPRIEDYP-----------EES--SRWY---------VVLAENATDVGITGGGVV 113
A LLG E YP E+S W ++ +V I G G +
Sbjct: 142 AVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGEGTI 201
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG + +W H RPR + C+NV + + ++ W +
Sbjct: 202 DGNSS------------FDTWWHDAKVKRIAWRPRTIFLNKCKNVLIEGITIKNSPSWTI 249
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H + N +++I + PN DG+D E + VI + GDD I K+
Sbjct: 250 HPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKS 302
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FGA GDG +T A + AI P + Q+ PPG++LT + L SH TL
Sbjct: 54 HTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTL 113
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
I + AT+L +YP + ++ N TDV ITG G ++G
Sbjct: 114 FIQKGATILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTING 173
Query: 116 QAMKFVVTKNE--IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
Q + V KN+ RP + + +NV + N+ + + W +
Sbjct: 174 QGKYWWVKYRSGGFKNIT--------------RPYTIEIMFSQNVQISNITIIDSPAWNI 219
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H V C+N ++ ++I ++PN DGI+ + NT+I + +GDD I K+
Sbjct: 220 HPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKS 272
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 113/266 (42%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTL 112
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITGG-GVVDG 115
+++DA LL I ++P + R+ ++ N TDV +TGG G +DG
Sbjct: 113 YLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + + + N+ L W LH
Sbjct: 173 QGAFW-------------WQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V N I+ ++I +PN DGI+ + NT I I +GDD + K+ +
Sbjct: 220 VYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKF 279
Query: 228 TGPLYNLTATD-SWIRTKSSAIKLGS 252
P L + I +S+AI LGS
Sbjct: 280 GWPTKQLVIRRLTCISPQSAAIALGS 305
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 119/279 (42%), Gaps = 39/279 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFG GDG+ +T A + A+ A K Q+ PPG +LTA L SH+TL +
Sbjct: 75 NLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLA 134
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
EDA +LG P + P E Y ++ ++ DV ITG G ++GQ
Sbjct: 135 EDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQ 194
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W + R LV + ++ + N+ LR+ +W +H C
Sbjct: 195 SW-------------WKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDC 241
Query: 179 DNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
N I+ ++I F PN DGID + + +I I GDDAI K+ Y
Sbjct: 242 KNITIKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGR 301
Query: 230 PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ + T + I +GS + +N+ I
Sbjct: 302 PSMNIMIRNLVKSTPFAGISIGSEMSGGVSNVTVENLLI 340
>gi|227114087|ref|ZP_03827743.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 444
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
HS+ + DGI DTA Q AID A G + PG YL + L S+ L +
Sbjct: 3 HSIQSYSPAADGITPDTAIFQQAIDRIAAQGGGT---LTVEPGRYLLGGLLLPSNFCLQL 59
Query: 73 HEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L+ E + + E S + A ++ I G G + G A + +
Sbjct: 60 EAGAVLIVSGDYEQFAQATTISMAELSHRAFLYAYQQRNITICGQGKIMGNADAYFSAEP 119
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + + H RPR+V F C +V + + + W +H+V C + +
Sbjct: 120 DAQGYRLPAQH---------RPRIVVFEDCEHVRLCDFTIEHAPMWTVHLVSCRHVIVER 170
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDS 239
++I D + N D +D++ I+ + DDA+C KT P + + ++
Sbjct: 171 LTIDNDLSMANTDALDLDSCQQVQISNCSLSAADDALCIKTTHKPPHLQRKVQQIVISNC 230
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+KS A+K+G+ ++ D + + N I
Sbjct: 231 LLRSKSCALKIGTETFADIEDISVSNCAI 259
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 44/286 (15%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++V D+GA GDG D AIQ AIDAC V G Y++ ++ L+S+V L +
Sbjct: 3 YNVRDYGAAGDGASKDRNAIQKAIDACSEAGGGRVVLPGGGTYMSGSLVLRSNVELYVES 62
Query: 75 DATLLGGPRIEDY-------PEES------------------SRWYVVLAENATDVGITG 109
A L DY PE S R+Y + ++ ITG
Sbjct: 63 GAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINCEYDGKPRYYFIYGRGGENIRITG 122
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFL--GCRNVNVWNVRLRE 167
G +DG + + + ++ GA PR+ L ++ V +V L
Sbjct: 123 FGTIDGSEEIYYGKQ-------IRYHIEGAYY-----PRIPMILMEDVEHLTVRDVTLTR 170
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTY 227
A+W LH+ C + + + I + N DGID + + I ++ DD I K
Sbjct: 171 CAFWTLHMAGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNT 230
Query: 228 T-----GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GP N+ + + + SSA+K+G+ S DF+ ++ +N I
Sbjct: 231 KGFEKYGPCKNILISGCTLISTSSAVKIGTESEDDFENIIIENCCI 276
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++GITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIGITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN ++ ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGA G +T AI +AIDAC +V P G +LT + KS++ L + ED
Sbjct: 42 KITDFGAVPGGEVDNTKAIAAAIDACNKAGGG-RVVVPAGIWLTGPVHFKSNINLCLEED 100
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG---------- 115
A L EDY P + W ++ A +V I+G G +
Sbjct: 101 AVLSFTDNPEDYLPAVMTSWEGLECYNYSPLLYAFECENVAISGKGTLQPKMGTWKVWFK 160
Query: 116 ------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
QA+K + TK NV V A + RP L+ F C+NV + ++RE
Sbjct: 161 RPAPHLQALKELYTKAST-NVPVIERQM-AIGENHLRPHLIHFNRCKNVMLDGFKIRESP 218
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 219 FWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 273
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++GITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIGITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN ++ ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 13 HIHSVIDFGAK--GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++++ DFGAK +G AI AI C V PPGE+LT I LKS+V L
Sbjct: 45 RVYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGG-TVLVPPGEFLTGPITLKSNVNL 103
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK- 119
++ E A L Y P +RW ++ A +++GITG G++DGQA
Sbjct: 104 HLEEGAYLKFSSEKYLYTPTVLTRWEGVDCYNLHPLIYAYGESNIGITGKGIIDGQASND 163
Query: 120 ----------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCR 156
KN ++ ++ + T A D RP+L+ C
Sbjct: 164 NWWSMCGAPHYGWKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCN 223
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + NV L+ +W +H + C++ +R + + + PN+DG D E S N +I D
Sbjct: 224 TILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGPNSDGCDPESSKNVLIENCIFD 281
Query: 217 TGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
TGDD I K+ + P N+ + ++ + +GS +K L +N +
Sbjct: 282 TGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGGVVVGSEISGGYKNLFVENCKM 341
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDGI +T ++Q ID C +V P G YLT ++ L++ VTL + +
Sbjct: 51 NVRDFGAIGDGITLETESLQRTIDRCGVLGGG-EVIIPAGRYLTGSVSLRTKVTLRLAAE 109
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
+LG P + Y RW ++ A +A + + G G ++G
Sbjct: 110 CVILGSPDLAHYAVSQVRWEGKWIPGYLGLIHALDARKIAVLGPGSIEG----------- 158
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
NV V+ T RP L+ FL C +V++ W +H CDN R++
Sbjct: 159 --NVAVAGRPTK--ENPLRRPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNL 214
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
++ N DGIDI+ + +I I +GDD I K+ G
Sbjct: 215 TVRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRG 255
>gi|242237658|ref|YP_002985839.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242129715|gb|ACS84017.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 605
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 49/255 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I ++ +GAKGDG +T AIQ+AI+AC G C++ P G + T + LKS +TLN+
Sbjct: 151 QIINITHYGAKGDGTTLNTTAIQNAINACNTG---CRIDIPAGVFKTGALWLKSDMTLNL 207
Query: 73 HEDATLLGGPRIEDYPEE------SSRWYVVLAENATD-----------VGITGGGVVDG 115
E ATLLG DYP SS+ NA D + I G GV+DG
Sbjct: 208 MEGATLLGSENAADYPAAYQIYSYSSQMRPASLLNAIDKHHSTVGTFQNIRIIGKGVIDG 267
Query: 116 QAMK-----------------FVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
K +V + N K+ +++ + A D + R
Sbjct: 268 NGWKRDTATEAKDETGAVIPHYVKSNNSKVGKDGILASSQVAAAIADGLDAKTAYGQARS 327
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G +NV + ++ +R PA+ + + + + ++ + ++ N DGI+ +S +
Sbjct: 328 SLITLRGVKNVYLADITIRNPAFHGMMFLENQHVVVNGVT-HHTYDANNGDGIEFGNSQD 386
Query: 208 TVITRVQIDTGDDAI 222
T++ DTGDD I
Sbjct: 387 TMVFNSVFDTGDDCI 401
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG +TAA + A+ Q+ P G +L+ + L S+ TL
Sbjct: 71 VMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLF 130
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ A +LG ++++P ++ +N T+V ITG G +DGQ
Sbjct: 131 LERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQ 190
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T R L+ N+ + N+ L +W +H V
Sbjct: 191 GKMWW---------ELWWNRTLV----HTRGHLIELKNSHNILISNLTLLNSPFWTIHPV 237
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N IR+M+I N PN DGID + S N I I++GDD + K+
Sbjct: 238 YCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 287
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA G+G H DT AIQ AI +CP K ++ P GEY ++I LKS +TL++ +
Sbjct: 87 NVKDFGAYGNGEHDDTNAIQCAIMSCP---KAGRILVPAGEYKISSIFLKSDITLDLAKG 143
Query: 76 ATLLGGPRIEDYP---------EESSRW--------------YVVLAENATDVGITGGGV 112
A L E +P +E+ + +V N +V ITG G
Sbjct: 144 AVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVITGEGT 203
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG A F +K ++W RPRL CRNV + + ++ W
Sbjct: 204 IDGNA-GFDNWWYNVKVRNIAW-----------RPRLFFINHCRNVTMHGITVQNSPSWT 251
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTG 229
LH D+ D+ I N+ N DG+D E + + I GDD I K+ Y G
Sbjct: 252 LHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMG 311
Query: 230 PLYNLTATDSWIR 242
+ + +D +R
Sbjct: 312 RKHKIPTSDMEVR 324
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-ATIRLKSHVTLNI 72
I+ V +GAK D AI AI+ C N V P G Y + TI LKS+V L++
Sbjct: 60 IYDVTAYGAKSDTSFDSRPAILEAINQCNT-NGGGTVLIPAGNYFSKGTILLKSNVNLHV 118
Query: 73 HEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ-AMKF- 120
+ A L DY P ++W + A T+V +TG G +DG A+ F
Sbjct: 119 ADGARLEFSTVASDYLPMVLTKWEGTECFNYSPFIYAYQCTNVALTGKGTIDGNGAVTFN 178
Query: 121 -----------VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
+ + I ++ V G G RP ++ F GC+NV V +V++ +
Sbjct: 179 GWHALQGPALDRLRQMGIDSIPVYERVFG--EGYYLRPCMIQFYGCKNVLVEDVQIYDSP 236
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V CDN +R+ +Y D N NNDG D E S N +I + + GDD I K+
Sbjct: 237 FWIIHPVFCDNVTVRN--VYIDSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKS 291
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 21/227 (9%)
Query: 19 DFGA--KGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
DFGA K + H T AI AIDA +V P G +LT I LKS++ L++ E A
Sbjct: 70 DFGARQKNNNNHKSTDAIHRAIDAATTAGG-GKVLIPRGNWLTGPIHLKSNINLHLEEGA 128
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVV---- 122
+L EDY P R+ ++ A+N +V ITG G+++GQ ++
Sbjct: 129 SLYFSEDKEDYLPVVKHRYEGVETYNYSSLIYAKNIENVAITGKGILEGQGEHWLKWGTV 188
Query: 123 --TKNEIKNVMVSWNHTGACSGDE-CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
K + + G +G E RP V F +N+ + + LRE W +H++
Sbjct: 189 QPRATATKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSS 248
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ +RD++I + N DGI ++ S++ ++ + TGDDAI K+
Sbjct: 249 HIVVRDITI-NSVESHNGDGIVLDSSSDALLEYNHLSTGDDAIVLKS 294
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FGA GDG +T A + AI P + Q+ PPG++LT + L SH TL
Sbjct: 43 HTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTL 102
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
I + AT+L +YP + ++ N TDV ITG G ++G
Sbjct: 103 FIQKGATILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTING 162
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + V +G G RP + + +NV + N+ + + W +H
Sbjct: 163 QGKYWWVKY-----------RSGGFKGIT-RPYTIEIIFSQNVQISNITIIDSPAWNIHP 210
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C+N ++ ++I ++PN DGI+ + NT+I + +GDD I K+
Sbjct: 211 VYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKS 261
>gi|424892220|ref|ZP_18315800.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|424893553|ref|ZP_18317133.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393183501|gb|EJC83538.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393184834|gb|EJC84871.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 454
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
+T +Q+AIDA ++ G ++ +RL+S V L++ A + P Y
Sbjct: 16 NTDRLQAAIDALSASGGG-RLELLAGTHICRGLRLRSGVDLHLAAGAIMRPVPDYAAYAH 74
Query: 89 -------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A++A + +TG G ++ +F+ +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-AKDARRISLTGEGRIEAGCERFITGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+ F GC V + + + W LH V C + +R+++I D PN DGI
Sbjct: 127 --EFRPRVAVFEGCDEVEISALHISRSPMWTLHFVDCTDVAVRNVTIENDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCTISTADDGICLKTSIGPRGVAIGRCENILIRRCSVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D +VF++ +
Sbjct: 245 HGDVTNVVFEDCRV 258
>gi|375262209|ref|YP_005021379.1| polygalacturonase family protein [Klebsiella oxytoca KCTC 1686]
gi|365911687|gb|AEX07140.1| polygalacturonase family protein [Klebsiella oxytoca KCTC 1686]
Length = 452
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 23/258 (8%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DGI DT Q A+D V G+Y +R+ S+ L + A L+
Sbjct: 12 ADGITRDTEIFQKALDTLSQAGGGTLV-VESGKYYLGGLRMGSNTCLWLSPGAELIVSDN 70
Query: 84 IEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
D+ + E S + A +A ++ I GGG + G A + + S +
Sbjct: 71 YADFTQAVALSRAECSDRAFLYALDAENISICGGGTIYGNADGWFSS---------SVDD 121
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
G + E RPR++ C+ V + N+ + W +H+V C I +++ D N
Sbjct: 122 MGYRTPAEQRPRMILLENCQRVRLENICIHHAPMWTIHLVSCSQVVIDGITVDNDLTMAN 181
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPLYNLTATDSWIRTKSSAIKL 250
D +DI+ + DDAIC P PL +T + +R+KS A K+
Sbjct: 182 TDALDIDSCQQVHVANSFFSAADDAICLKTTDKPAAIQRPLRQVTIVNCTLRSKSCAFKI 241
Query: 251 GSASWFDFKALVFDNITI 268
G+ +W D + +V N TI
Sbjct: 242 GTETWQDIEDIVVSNCTI 259
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FGA GDG +T A + AI P + Q+ PPG++LT + L SH TL
Sbjct: 54 HTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTL 113
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
I + AT+L +YP + ++ N TDV ITG G ++G
Sbjct: 114 FIQKGATILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTING 173
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + V +G G RP + + +NV + N+ + + W +H
Sbjct: 174 QGKYWWVKY-----------RSGGFKGIT-RPYTIEIIFSQNVQISNITIIDSPAWNIHP 221
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C+N ++ ++I ++PN DGI+ + NT+I + +GDD I K+
Sbjct: 222 VYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKS 272
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 103/252 (40%), Gaps = 39/252 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAKGDGI DT IQ+AI ACP ++ V P G Y ++ LK V + + E A
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAIMACPEKSR---VLIPAGTYRIVSLFLKDDVNIELAEGA 140
Query: 77 TL----------LGGPRIEDYPEESS----RWY---------VVLAENATDVGITGGGVV 113
L + I+ Y E+ W ++ N I G G +
Sbjct: 141 VLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIYGQGTI 200
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DG A + +W H CRPR++ CR V V + +R W +
Sbjct: 201 DGNA----------GDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNI 250
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGP 230
H D+ D+ + ++PN DG+D E + I V GDD I K+ Y G
Sbjct: 251 HPYFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGS 310
Query: 231 LYNLTATDSWIR 242
Y + D IR
Sbjct: 311 TYKRPSKDISIR 322
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + +FGA GDG +T A + AI P + Q+ PPG++LT + L SH TL
Sbjct: 54 HTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTL 113
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
I + AT+L +YP + ++ N TDV ITG G ++G
Sbjct: 114 FIQKGATILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTING 173
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + V +G G RP + + +NV + N+ + + W +H
Sbjct: 174 QGKYWWVKY-----------RSGGFKGIT-RPYTIEIIFSQNVQISNITIIDSPAWNIHP 221
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C+N ++ ++I ++PN DGI+ + NT+I + +GDD I K+
Sbjct: 222 VYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKS 272
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 31/239 (12%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATI 62
LLL + + S++DFG GDG +T + A+ + Q+ P G +LT +
Sbjct: 69 LLLPRREV-VRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSF 127
Query: 63 RLKSHVTLNIHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGIT 108
L S+ TL + E A +LG P IE P ++ T+V IT
Sbjct: 128 NLTSNFTLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIIT 187
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G +DGQ + + WN T + R LV + N+ + N+ R
Sbjct: 188 GNNGSIDGQGKMWW---------ELWWNRTL----EHTRGHLVELMNSHNILISNLTFRN 234
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C N ++DM+I N PN DGID + S N I I++GDD + K+
Sbjct: 235 SPFWTIHPVYCSNVVVKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 293
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 40/282 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
+ ++ DFG GDG +T A + A I + + Q+ P G +LTA L SH+TL
Sbjct: 50 VFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTL 109
Query: 71 NIHEDATLLGG------PRIEDYPE-------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ EDAT+L P ++ P R+ ++ ++ D+ ITG G +DG
Sbjct: 110 FLEEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDG 169
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
K+ W R RL+ + R + + +V LR +W +H
Sbjct: 170 NGRKW-------------WEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHP 216
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
C+N IR ++I + PN DGID + N +I I GDD + K+ Y
Sbjct: 217 YDCENVTIRGVTIIAPPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDY 276
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+T + + SA + +GS + +N+ I
Sbjct: 277 GKPCANITIRNIQVNAPVSAGVSIGSEMSGGITNVTVENVFI 318
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V D GA GDG DT A+Q A+D C +V P GEYLT +R+ S+ L I E
Sbjct: 42 NVRDLGATGDGSTKDTVAMQLALDRCSVLGG-GEVLVPAGEYLTGALRIHSNTVLRIEEG 100
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGG-----------VVDG 115
A+L G P I DYP RW + A++ +V I G G VV
Sbjct: 101 ASLNGSPDIGDYPFTQVRWEGRWIKGYSAFISAQDGENVTIIGKGKIVASPAIKGRVVHA 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECR-PRLVGFLGCRNVNVWNVRLREPAYWCLH 174
V T+ T D R P L+ F CRNV V +V + W H
Sbjct: 161 DGSPMVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCRNVLVQDVFTQGNDMWSTH 220
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
V C+N R+++++ DGID++ VI + T DD I K+ G
Sbjct: 221 PVYCENVTFRNVTVHS-----GADGIDVDSCKGVVIDGCEFVTRDDCISLKSGRG 270
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 46/267 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFG GDG+ +T A + A+ A + Q+ PPG +LTA L SH+TL +
Sbjct: 65 NLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHMTLFLA 124
Query: 74 EDATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDG 115
+DA +LG I+D P S Y ++ +N DV ITG G ++G
Sbjct: 125 QDAVILG---IQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTING 181
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + E NHT R LV + ++ + N+ LR+ +W LH
Sbjct: 182 QGQSWWTKYRE-----KLLNHT--------RGPLVQIMWSSDIVIANITLRDSPFWTLHP 228
Query: 176 VRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
C N I++++I ++ PN DGID + + +I I GDDAI K+
Sbjct: 229 YDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIA 288
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGS 252
Y P N+ + +R+ SA I +GS
Sbjct: 289 YGKPSKNIIIRNLVVRSNVSAGISIGS 315
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG+ +T A + AI+ + + Q+ P G++LT + L SH TL
Sbjct: 52 HTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTL 111
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRWY-VVLAENATDVGITGG-GVVDG 115
+H+DA +LG ++P+ R+ ++ N TDV ITG G +DG
Sbjct: 112 FVHKDAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDG 171
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + RP L+ + + + ++ L W +H
Sbjct: 172 QGAYW-------------WDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHP 218
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I+ ++I ++PN DGID + +NT I I +GDD I K+
Sbjct: 219 IYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKS 269
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+V+DFGAK D T AI+ AI A G + FPPG YLT I LKS++TL I
Sbjct: 24 NVLDFGAKNDSSALATTAIKEAIAKASQAGGG--TIYFPPGTYLTGPIHLKSNITLFIEA 81
Query: 75 DATLLGGPRIEDY-PEESSRWYVVLAEN---------ATDVGITGGGVVDGQAMK-FVVT 123
A L + Y P SRW + N A ++ ITG G ++G K + +
Sbjct: 82 GAELCFSDNFDHYLPMVPSRWEGTMVTNFSPFIYAYEAENIRITGRGTLNGNGKKWWAYS 141
Query: 124 KNEIKNVMVS-WNHT--------------GACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
+ +KN S W G RP + + C+NV + + ++
Sbjct: 142 EVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRIDGITIKNS 201
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-- 226
+W ++ CDN I ++I + +PN DGI+ E +N I+ I GDD I K+
Sbjct: 202 PFWTVNPEFCDNVTIDGVTI-NNPPSPNTDGINPESCSNVHISNCHISVGDDCITIKSGK 260
Query: 227 ------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
P N T T+ + + + +GS D K +V N
Sbjct: 261 DRSGRKEARPAENYTITNCTMLSGHGGVVIGSEMSGDVKKIVISN 305
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIH 73
++V D+GAK D AI AI+ C N V P G Y + I LKS+V L+I
Sbjct: 49 YNVTDYGAKNDTAFDSRPAILEAINKCNQ-NGGGTVLIPAGNYFIKGAITLKSNVNLHIV 107
Query: 74 EDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ-AMKF-- 120
E A L DY P ++W + A T+V +TG G +DG A+ F
Sbjct: 108 EGARLEFSTAASDYLPMVLTKWEGTECFNYTPFIYAYQCTNVALTGKGTLDGNGAVTFNG 167
Query: 121 ----------VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+ + I ++ V G G RP ++ F GC+NV V +VR+ + +
Sbjct: 168 WHAKQGPAVDRLRQMGIDSIPVYERVFG--EGYYLRPCMIQFYGCKNVLVEDVRIFDSPF 225
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C+N +R+ IY D N NNDG D E N +I + + GDD I K+
Sbjct: 226 WIIHPVFCNNVTVRN--IYIDSNNYNNDGCDPESCTNVLIENMDFNVGDDGIAIKS 279
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 36/239 (15%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I + +FGA GDG +T AIQ+AI + P N ++R G YLT + LKS++T+NI
Sbjct: 81 ILDIREFGAVGDGKTVNTFAIQTAILSAPE-NSIIEIR--DGNYLTGPVLLKSNITINIA 137
Query: 74 EDATLLGGPRIEDYP------EESSRWY---------------VVLAENATDVGITGGGV 112
+A L E YP ++ R + + + +V ITG G
Sbjct: 138 GNARLTALKEREMYPILPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNITGEGT 197
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DG + + K + K +SW RPR + C N+N+ + + W
Sbjct: 198 IDGNSDRETWWK-DAKIKRISW-----------RPRTIFLTDCSNINIVGINIENSPSWT 245
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL 231
LH V N DM I ++PN DGID E N I V+ GDD I K+ G +
Sbjct: 246 LHPVFSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKI 304
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GA GDG +T A ++AI AC V P G +LT I L+S V L++ E
Sbjct: 19 TITHYGAVGDGQKMNTEAFRAAIAACHRAGG-GHVLVPEGRFLTGAIHLRSGVDLHVTEG 77
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM------- 118
AT+ P D+ P +RW + A +V +TG G +DGQA
Sbjct: 78 ATIAFSPDPRDFLPVVFTRWEGTECYNYSPFIYAYGERNVAVTGPGTLDGQARLGPWESW 137
Query: 119 ----------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
+ ++ + V V+ G G RP++V F CRNV V + + +P
Sbjct: 138 YRSSGPQGPDQSLLRRMGSAGVPVAERVFG--DGHYLRPKMVQFYRCRNVLVSGLTIVDP 195
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT 228
W +H V N +RD+++ D N DG D E ++ +IT + +T DD + K+
Sbjct: 196 PMWTVHPVLSTNVTVRDITV--DSTLYNTDGCDPECCSDVLITGCRFNTNDDCVAVKSGR 253
Query: 229 G--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ D W + + +GS + + +N I
Sbjct: 254 DEDGHRVGVPSRNIVVRDCWFSGRWGGMTVGSEMSGGVRDVFAENCEI 301
>gi|397694832|ref|YP_006532713.1| glycoside hydrolase family protein [Pseudomonas putida DOT-T1E]
gi|397331562|gb|AFO47921.1| glycoside hydrolase family protein [Pseudomonas putida DOT-T1E]
Length = 606
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GAKGDG DTAAIQ AIDAC G C+V P G Y + + LKS +TL I
Sbjct: 151 LFNVQRYGAKGDGKALDTAAIQRAIDACSKG---CKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 74 EDATLLGGPRIEDYPEESSRWYVV-----------------LAENA-TDVGITGGGVVD- 114
E ATLLG R EDYP + Y A A ++ I G G +D
Sbjct: 208 EGATLLGSERAEDYPRQGYIQYPYSTTVRPASLINALPRDPRAHQAFENIRIVGKGTIDG 267
Query: 115 -------------GQAMKF-------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
GQA+ F V+ K +++ + + G + R
Sbjct: 268 NGWKRNPDVLDERGQALPFYLPSDNSRYMHDGVLAKAQVERAVAEGMNVKDAYG-QMRSS 326
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PAY + + N + + + + ++ N DGI+ +S
Sbjct: 327 LITLRNVKNVFYGGFTVVNPAYHGIMNLETQNVVLAN-TTHRTYDANNGDGIEFANSRGA 385
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG ++ ++WI
Sbjct: 386 LVFNNFFDTGDDCVNFAAGTGADAVHQKAQEEAWI 420
>gi|386011445|ref|YP_005929722.1| Glycoside hydrolase family protein [Pseudomonas putida BIRD-1]
gi|313498151|gb|ADR59517.1| Glycoside hydrolase family protein [Pseudomonas putida BIRD-1]
Length = 606
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GAKGDG DTAAIQ AIDAC G C+V P G Y + + LKS +TL I
Sbjct: 151 LFNVQRYGAKGDGKALDTAAIQRAIDACSKG---CKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 74 EDATLLGGPRIEDYPEESSRWYVV-----------------LAENA-TDVGITGGGVVD- 114
E ATLLG R EDYP + Y A A ++ I G G +D
Sbjct: 208 EGATLLGSERAEDYPRQGYIQYPYSTTVRPASLINALPRDPRAHQAFENIRIVGKGTIDG 267
Query: 115 -------------GQAMKF-------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
GQA+ F V+ K +++ + + G + R
Sbjct: 268 NGWKRNPDVLDERGQALPFYLPSDNSRYMHDGVLAKAQVERAVAEGMNVKDAYG-QMRSS 326
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PAY + + N + + + + ++ N DGI+ +S
Sbjct: 327 LITLRNVKNVFYGGFTVVNPAYHGIMNLETQNVVLAN-TTHRTYDANNGDGIEFANSRGA 385
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG ++ ++WI
Sbjct: 386 LVFNNFFDTGDDCVNFAAGTGADAVHQKAQEEAWI 420
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDF A D T AIQ AID+ G+ V P G +LT + LKS +TL + +D
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAIDSASAGDT---VLIPAGRFLTGALFLKSEMTLELAKD 61
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAM----KFVV 122
A LLG R+EDYP+ +R W + + +V + G G +DGQ KF
Sbjct: 62 AVLLGSQRLEDYPDIPTRVAGIDMVWPAAMLNINHCRNVTVCGSGTLDGQGAVWWHKF-W 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ + G D RPR V V + + ++ +W LH+
Sbjct: 121 GDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSK 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP---LYNLTA 236
++ + + + P+ DGIDI+ S + + DD IC K+ G TA
Sbjct: 181 QVNLQRLRVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLGRTA 239
Query: 237 TDSWIR----TKSSAIKLGSAS 254
D IR K S I LGS +
Sbjct: 240 RDIIIRDCTLLKGSGITLGSET 261
>gi|149199370|ref|ZP_01876407.1| putative polygalacturonase [Lentisphaera araneosa HTCC2155]
gi|149137612|gb|EDM26028.1| putative polygalacturonase [Lentisphaera araneosa HTCC2155]
Length = 484
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 21 GAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG 80
G K DG+ + +Q ID C V G ++ I LKS+VTL I +DA L
Sbjct: 16 GVKADGVSNNALILQGLIDRCASEGGGTVV-IDKGVVVSGAITLKSYVTLEIAKDAVLQN 74
Query: 81 GPRIEDYPE--------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
EDYP R ++ A+N V + G G ++G++ KF
Sbjct: 75 TGDREDYPYVPVDFLSYYPERRAMIYAQNQKHVAVVGKGTIEGRSDKF------------ 122
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
A S + R L+ F GC NV + ++ L+ + W H RCD + +++
Sbjct: 123 -----KARSSESARVSLIRFDGCENVLIKDITLQNASMWTQHYYRCDKVNVSGITVKNYM 177
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL-YNLTATDSWIRTKSSAIKLG 251
N+DG++I+ ++ I I + DDAI KT + N+ T+ + + SA K G
Sbjct: 178 --KNDDGLNIDGCHDVKIDNCDIRSHDDAITLKTCSRRANKNILVTNCRLNSVKSAFKFG 235
Query: 252 SASWFDFKALVFDNITI 268
+ S F + N+ I
Sbjct: 236 TESHAGFINVTARNLKI 252
>gi|148547114|ref|YP_001267216.1| glycoside hydrolase [Pseudomonas putida F1]
gi|148511172|gb|ABQ78032.1| glycoside hydrolase, family 28 [Pseudomonas putida F1]
Length = 606
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GAKGDG DTAAIQ AIDAC G C+V P G Y + + LKS +TL I
Sbjct: 151 LFNVQRYGAKGDGKALDTAAIQRAIDACSKG---CKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 74 EDATLLGGPRIEDYPEESSRWYVV-----------------LAENA-TDVGITGGGVVD- 114
E ATLLG R EDYP + Y A A ++ I G G +D
Sbjct: 208 EGATLLGSERAEDYPRQGYIQYPYSTTVRPASLINALPRDPRAHQAFENIRIVGKGTIDG 267
Query: 115 -------------GQAMKF-------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
GQA+ F V+ K +++ + + G + R
Sbjct: 268 NGWKRNPDVLDERGQALPFYLPSDNSRYMHDGVLAKAQVERAVAEGMNVKDAYG-QMRSS 326
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PAY + + N + + + + ++ N DGI+ +S
Sbjct: 327 LITLRNVKNVFYGGFTVVNPAYHGIMNLETQNVVLAN-TTHRTYDANNGDGIEFANSRGA 385
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG ++ ++WI
Sbjct: 386 LVFNNFFDTGDDCVNFAAGTGADAVHQKAQEEAWI 420
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 27/237 (11%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPG-EYLTATIRLKSHVTL 70
++ ++ GAKG+G A + A A G ++ P G Y+ + L S+V L
Sbjct: 33 YVINIQKMGAKGNGTTDCLPAFKKAFKKAVRKGG--ARIVVPAGVYYIKGPLHLVSNVCL 90
Query: 71 NIHEDATLLGGPRIEDY-PEESSRWYVVLAENAT---------DVGITGGGVVDGQAMKF 120
I E ATL P E Y P + W +N + DV I G G +DG AM
Sbjct: 91 EIQEGATLKFAPEPEYYLPAVKTSWEGTFLQNYSPFIYGYQLHDVSIIGKGTIDGNAMTT 150
Query: 121 VVT----KNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
T + + NH G GD RP L+ GC + + +V +
Sbjct: 151 FATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIEDVFITNSP 210
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+WC+H+++ +N +R SI D NNDGID E S N +I V + GDD + K+
Sbjct: 211 FWCIHLLQSENAILR--SIRFDAKLVNNDGIDPEMSRNVLIEDVHFNNGDDNVAIKS 265
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNI 72
++ V D+GAK D AI AI C N V P G Y + I LKS++ L+I
Sbjct: 50 VYDVTDYGAKSDTTFDSCPAILQAISHCNT-NGGGTVLIPAGNYFIKGAITLKSNINLHI 108
Query: 73 HEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ-AMKF- 120
E A L DY P ++W + A T+V +TG G +DG ++ F
Sbjct: 109 AEGARLEFSTEAADYLPMVLTKWEGTECFNYSPFIYAYQCTNVAVTGKGTIDGNGSVTFN 168
Query: 121 -----------VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
+ + I +V V G G RP ++ F GC+NV V ++++ +
Sbjct: 169 GWHAIQGPAVDRLRQMGIDSVPVYQRVFG--EGHYLRPCMIQFYGCKNVLVEDLKIYDSP 226
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V CDN +R+ +Y D N NNDG D E N +I + + GDD I K+
Sbjct: 227 FWIIHPVFCDNVTVRN--VYIDSNNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKS 281
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 6 LLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAI--DACPPGNKPCQVRFPPGEYLTATIR 63
L S H S+ +FGA GDG+ +T A Q+A+ ++ P G++LT +
Sbjct: 34 LASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFD 93
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWY--VVLAENATDVGITG 109
L SH+TL + AT+LG E++P E R + ++ +N TDV ITG
Sbjct: 94 LISHLTLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITG 153
Query: 110 -GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
G +DGQ +V W G + RP LV + + + N+
Sbjct: 154 ENGTIDGQG-----------SVWWDWFRNGEL--NYTRPHLVELMNSTGLIISNLTFLNS 200
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C + +++++I +PN DG+D + S N I I T DD + KT
Sbjct: 201 PFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKT 258
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 104/264 (39%), Gaps = 52/264 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
H S+ +FGA DGI +T A IDA V P G +LT I LKS++ L++
Sbjct: 57 HSRSITEFGAVADGITLNTEAFAQTIDAVSQ-QGGGTVVVPAGLWLTGPIVLKSNINLHL 115
Query: 73 HEDATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVT 123
E+A +L YP E V A A ++ ITG GV+DG +
Sbjct: 116 EENALVLFTADHTQYPIIKTSFEGLETRRCQSPVSANGAENIAITGKGVMDGNGDTWRPV 175
Query: 124 KNEIKNVMVSWNHTGACSG----------------------------------------- 142
K K WN A G
Sbjct: 176 KKG-KMTASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFNVPEGIETEEDWNSIR 234
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
D RP L+ F+ C+ V + V + WCLH + C++ + ++S+ + + N D +DI
Sbjct: 235 DWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNGDALDI 294
Query: 203 EDSNNTVITRVQIDTGDDAICPKT 226
E N ++ D GDD IC K+
Sbjct: 295 ESCNRVLVLNSSFDAGDDGICIKS 318
>gi|312794448|ref|YP_004027371.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181588|gb|ADQ41758.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 446
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I + GAK DGI + AIQ AID C +V P G YL+ I LKS+VTL +
Sbjct: 2 IIDITQLGAKPDGITFCEGAIQKAIDMCHEKGGG-KVIVPAGVYLSRPIELKSNVTLYLE 60
Query: 74 EDATLLGGPRIEDYPE---ESSRW----YVVLAENATDVGITGGGVVDGQAMKFVVTK-- 124
E A L P IEDY + + W + A N ++ I G G +D F+
Sbjct: 61 EGAILKASPHIEDYFKIGYYHNEWGDVTSFLFAMNQKNISIDGKGTIDLSGSSFMDFSQA 120
Query: 125 ----NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW--CLHIVRC 178
+E++N+ C + + F C N+N+ V + + W C+H R
Sbjct: 121 FNIFDELQNLTPEQFEETECKPKHRPNQPIFFYNCENINLSGVSIIDSPCWTVCIHSSRY 180
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLT 235
+ + I + PN+DGI + N +IT GDD + T N+
Sbjct: 181 IK--VNSIKIVNNLRVPNSDGIHLCSCENVMITNSFFVCGDDCVALSGITNWEKSCENVI 238
Query: 236 ATDSWIRTKSSAIKLG 251
++ ++T+S+A+++G
Sbjct: 239 VSNCIMQTRSAALRMG 254
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
LL + ++ ++ DFGA GDG DT AIQ AIDAC NK V P G YLT +
Sbjct: 106 LLYVRTSLSPKYFNIKDFGAVGDGKSLDTKAIQQAIDAC---NKQGIVVVPKGVYLTGAL 162
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVV 122
KS++TL I E A L G + YP SR+ + + I GG ++ G +F +
Sbjct: 163 FFKSYMTLYIEEGAILKGSSDLAHYPIVRSRFEGIEGSQYASL-INGGTLLSGGIQEFSI 221
Query: 123 TKNEI-----KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
I +N++ G R R++ + N+ + V + W +H +
Sbjct: 222 RGKGIIDANGENLINQQKKEGLG----YRGRILSLMNGENICLEGVTFLQSPAWGVHFIY 277
Query: 178 CDNTFIRDMSIYGDFNTP--------NNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C I+D+ I F+ N DG+ I+ S + V+ I + DD + K+
Sbjct: 278 CMGVTIKDVYINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKS 334
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 11 HIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
+ +++++D+GA DG T AI +AI+A V P G YLT I LKS++ L
Sbjct: 23 EMQVYNIVDYGAPQDGTTLATGAIAAAIEAASNAGG-GTVFVPSGTYLTGAIFLKSNIEL 81
Query: 71 NIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFV 121
++ A L + DYP SRW + +N ++ +TG G +DG
Sbjct: 82 HLSPGAILSFSTDLVDYPVVESRWEGVQREVHASCIYGQNLENISVTGSGTLDGNGQ--- 138
Query: 122 VTKNEIKNVMVSWNHTGACSGDEC---RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
W +E RP+L+ F C+ V + +V L+ W ++ + C
Sbjct: 139 -----------PWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIAC 187
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLY 232
N I ++SI ++PN DGI+ E +N I+ ID GDD I K T P
Sbjct: 188 YNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIPCE 247
Query: 233 NLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
N+T T+ + A+ LGS D + + N
Sbjct: 248 NITITNCTMVHGHGAVVLGSEMSGDIRNVTISN 280
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 113/277 (40%), Gaps = 46/277 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +FGAKGDG+ DT IQ+AI ACP K +V P G Y ++ LKSH+ L +
Sbjct: 82 NVKEFGAKGDGLQDDTGFIQAAILACP---KNGRVLIPKGTYRITSLFLKSHIRLELGAG 138
Query: 76 ATLLGG------PR----IEDYPEES----SRWY---------VVLAENATDVGITGGGV 112
A L PR IE Y E W ++ +V I G G+
Sbjct: 139 AILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLPMFAGIINGIEVENVVIYGEGL 198
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DGQA +N W G G RPR+V C+++ + L+ W
Sbjct: 199 IDGQA--------SFENW---WKDAGTMRG-AFRPRMVFLERCKDITLQGFYLKNSPAWV 246
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
LH D+ I ++PN DG+D E + IT + GDD I K+
Sbjct: 247 LHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMG 306
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKAL 261
Y P N+ + A+ +GS KA+
Sbjct: 307 RRYKTPSENIEIRQCLMENGHGAVTVGSEVGAGVKAV 343
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 116/274 (42%), Gaps = 34/274 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT IQ+AI ACP K +V P G Y ++ LKS++ L + +
Sbjct: 84 NVRDFGATGDGKQDDTKFIQAAILACP---KESRVLIPKGSYRITSLFLKSNLRLELAKG 140
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF---VVTKNEIKNVMV 132
A L+ YP+ + + E+ + G G +G + ++T +++NV++
Sbjct: 141 AELIADTDRAAYPK-----FPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLI 195
Query: 133 S--------------WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
W + G RPRL C+NV + V + W LH
Sbjct: 196 YGRGTINGNASKENWWKNPKVMVG-AFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFS 254
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
DN ++I ++PN DG+D E N I V+ GDD I K+ Y P
Sbjct: 255 DNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTP 314
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFD 264
N+ + A+ +GS K LV +
Sbjct: 315 SENIHIRQCLMENGHGAVTVGSEMAGGVKNLVVE 348
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 38/232 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A Q+AID + Q+ PPG++LT + L SH TL +H
Sbjct: 44 SLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHFTLFLH 103
Query: 74 EDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITG-GGVVDGQA- 117
+DA +L D+P + R+ ++ N TDV ITG G +DGQ
Sbjct: 104 KDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGD 163
Query: 118 ---MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
KF K E+K RP L+ + NV + N+ L W +H
Sbjct: 164 LWWQKF--RKGELKYT---------------RPYLIEIMYSDNVQISNLTLVNSPSWNVH 206
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N ++ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 207 PIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 258
>gi|417107200|ref|ZP_11962432.1| putative polygalacturonase protein [Rhizobium etli CNPAF512]
gi|327189815|gb|EGE56955.1| putative polygalacturonase protein [Rhizobium etli CNPAF512]
Length = 454
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
+T+ +Q+AID +++ G +L ++L+S V L++ A L E Y
Sbjct: 16 NTSRLQAAIDDLSASGGG-RLKLLAGIHLCRGLQLRSGVELHLAAGAILRPVSDYEAYAH 74
Query: 89 -------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A+ A + +TG G ++ F++ +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-AKGARRISLTGPGRIEAGCESFIIGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V F C V + V + W LH V C + +R+++I D PN DGI
Sbjct: 127 --EFRPRVVVFESCDEVEISAVHISRSPMWTLHFVNCTDVAVRNVTIENDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCTISTADDGICLKTSIGPQGVAIGRCENILIRRCSVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D +VF++ ++
Sbjct: 245 HGDVTNVVFEDCSV 258
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 46/267 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFG GDG+ +T A + A+ A K Q+ PPG ++TA L SH+TL +
Sbjct: 77 NLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSHMTLFLA 136
Query: 74 EDATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDG 115
ED+ +LG IED P S Y ++ +N DV ITG G ++G
Sbjct: 137 EDSIILG---IEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNGTING 193
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + R LV + ++ + N+ LR+ +W LH
Sbjct: 194 QGQTW-------------WKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHP 240
Query: 176 VRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
C N IR+++I PN DGID + + VI I GDD I K+
Sbjct: 241 YDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIA 300
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGS 252
Y P N+ + +R+ SA I +GS
Sbjct: 301 YRRPSTNILIRNLVVRSMVSAGISIGS 327
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNI 72
I+ V ++GAK D AI AI+ C + V P G Y + I LKS++ L+I
Sbjct: 50 IYDVTEYGAKDDTAFDSRPAILKAINQCNT-DGGGTVLIPAGNYFIKGAITLKSNINLHI 108
Query: 73 HEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVV 122
E A L DY P ++W + A T+V +TG G +DG V
Sbjct: 109 AEGARLEFSTEAADYLPMVLTKWEGTECFNYSPFIYAYQCTNVAVTGKGTIDGNGS---V 165
Query: 123 TKNE----------------IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
T N+ I +V V G G RP ++ F GC+NV V ++++
Sbjct: 166 TFNDWHAIQGPAVDRLRQMGIDSVPVYERVFG--EGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ +W +H V CDN +R+ +Y D N NNDG D E S N +I + + GDD I K+
Sbjct: 224 DSPFWIIHPVFCDNVTVRN--VYIDSNNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKS 281
>gi|395448466|ref|YP_006388719.1| glycoside hydrolase family protein [Pseudomonas putida ND6]
gi|388562463|gb|AFK71604.1| glycoside hydrolase family protein [Pseudomonas putida ND6]
Length = 623
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GAKGDG DTAAIQ AIDAC G C+V P G Y + + LKS +TL I
Sbjct: 168 LFNVQRYGAKGDGKALDTAAIQRAIDACSKG---CKVLLPAGTYKSGALYLKSDMTLEIA 224
Query: 74 EDATLLGGPRIEDYPEESSRWYVV-----------------LAENA-TDVGITGGGVVD- 114
E ATLLG R EDYP + Y A A ++ I G G +D
Sbjct: 225 EGATLLGSERAEDYPRQGYIQYPYSTTVRPASLINALPRDPRAHQAFENIRIVGKGTIDG 284
Query: 115 -------------GQAMKF-------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
GQA+ F V+ K +++ + + G + R
Sbjct: 285 NGWKRNPDVLDERGQALPFYLPSDNSRYMHDGVLAKAQVERAVAEGMNVKDAYG-QMRSS 343
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PAY + + N + + + + ++ N DGI+ +S
Sbjct: 344 LITLRNVKNVFYGGFTVVNPAYHGIMNLETQNVVLAN-TTHRTYDANNGDGIEFANSRGA 402
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG ++ ++WI
Sbjct: 403 LVFNNFFDTGDDCVNFAAGTGADAVHQKAQEEAWI 437
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDA----CPPGNKPCQVRFPPGEYLTATIRLKSHV 68
H + DFGA GDG +T A AI P G Q+ P G++LT + L SH
Sbjct: 12 HSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGG--AQLIVPAGKWLTGSFNLTSHF 69
Query: 69 TLNIHEDATLLGGPRIEDYP-----------EESSRW----YVVLAENATDVGITG-GGV 112
TL +H+DA LL +++P E++ + ++ A N TDV ITG G
Sbjct: 70 TLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVIITGNNGT 129
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
VDGQ + NE K + RP L+ + V + N+ L W
Sbjct: 130 VDGQGAVWWEKFNEKKLKKLE------------RPYLIEIMYSDQVQISNITLINSPQWH 177
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + N +I+ ++I + PN DGI+ + N +I I +GDD I K+
Sbjct: 178 VHPIYSSNLWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYG 237
Query: 227 --YTGPLYNLTATD-SWIRTKSSAIKLGSASWFDFKALVFDNIT 267
P+ L + I KS+AI LGS + + ++IT
Sbjct: 238 IKVGMPMKQLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDIT 281
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTA 60
L L H + DFG GDG +T A +SAID + + PPG++LT
Sbjct: 44 LEFLALNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTG 103
Query: 61 TIRLKSHVTLNIHEDATLLGG------PRIEDYPEE--------SSRWYVVLAENATDVG 106
+ L SH TL IH+DA LLG PR+ P ++ N TDV
Sbjct: 104 SFNLTSHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVV 163
Query: 107 ITGG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRL 165
+TG G +DGQ + W D RP L+ + V + N+
Sbjct: 164 VTGANGTIDGQGAYW-------------WGKFKKNQLDVTRPYLIEIMYSNQVQISNLTF 210
Query: 166 REPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W +H + N I+ ++I ++PN DGID + + I I +GDD I K
Sbjct: 211 VNSPSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVK 270
Query: 226 T 226
+
Sbjct: 271 S 271
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++I +GA DGI +T +I +AIDAC N V P G ++T I LKS+V L+I
Sbjct: 45 NIIKYGAVADGITLNTKSINNAIDACSK-NGGGVVLIPQGLWMTGPIVLKSNVNLHIDRA 103
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAM-------K 119
A + YP + V N ++ ITGGG++DG K
Sbjct: 104 AMVQMTDDKSQYPLVEGNYEGHAAVRNQSPVSGTNLVNIAITGGGIIDGNGTGVWRAIGK 163
Query: 120 FVVTKNEIKNVMVS----------WNHTGACSG-----------------------DECR 146
+T++E K ++ S W + + + D R
Sbjct: 164 DRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPGKSLSDYEEYKDYFR 223
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P +V GC+ + + + WCLH + C++ ++D+ + +N N D ID+E
Sbjct: 224 PNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAIDVESCR 283
Query: 207 NTVITRVQIDTGDDAICPKT 226
N ++ D GDD +C K+
Sbjct: 284 NVLVENSTFDAGDDGLCIKS 303
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGA G +T AI +AIDAC +V P G +LT + KS+V L + E+
Sbjct: 45 KITDFGAVPGGEVNNTQAIAAAIDACNKAGGG-RVVVPAGTWLTGPVHFKSNVNLCLEEN 103
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG---------- 115
A L EDY P + W ++ A +V I+G G +
Sbjct: 104 AVLSFTDNPEDYLPAVMTSWEGLECYNYSPLLYAFECENVAISGKGTLQPKMGTWKVWFK 163
Query: 116 ------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
+A+K + TK NV V A + RP L+ F C+NV + ++RE
Sbjct: 164 RPAPHLEALKDLYTKAST-NVPVIERQM-AVGENHLRPHLIHFNRCKNVMLDGFKIRESP 221
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 222 FWTIHLYMCDGGMVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 276
>gi|403059816|ref|YP_006648033.1| glycoside hydrolase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807142|gb|AFR04780.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 444
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
HS+ + DGI DTA Q AID A G + PG YL + L S+ L +
Sbjct: 3 HSIQSYSPAADGITPDTAIFQQAIDRIAAQGGGT---LTVEPGRYLLGGLLLPSNFCLQL 59
Query: 73 HEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L+ E + + E S + A ++ I G G + G A + +
Sbjct: 60 EAGAELIVSGDYEQFAQATTISMAELSHRAFLYAYQQRNITICGQGKIMGNADAYFSAEP 119
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + + H RPR+V F C +V + + + W +H+V C + +
Sbjct: 120 DDQGYRLPAQH---------RPRIVVFEDCEHVRLCDFTIEHAPMWTVHLVSCRHIIVER 170
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDS 239
++I D + N D +D++ I+ + DDA+C KT P + + ++
Sbjct: 171 LTIDNDLSMANTDALDLDSCQQVQISNCSLSAADDALCIKTTNKPPHLQRKVQQVVISNC 230
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+KS A+K+G+ ++ D + + N I
Sbjct: 231 LLRSKSCALKIGTETFADIEDISVSNCAI 259
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GAK G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHKSGGG-RVVVPAGIWLTGPIHFKSNVNLYLEENA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 113 ILNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 172
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 173 PQPHLEALKELYTKASTDVPVIE--RQMAVGENHLRPHLIHFNRCKNVLLDGFKIRESPF 230
Query: 171 WCLHIVRCDNTFIRDMSI--YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + +GD NNDGID E S N ++ D GDDA+ K
Sbjct: 231 WTIHLYMCDGGLVRNLDVKAHGD----NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 33/240 (13%)
Query: 7 LSTTHIHIHSVI--DFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATI 62
S + HS I DFGA GDG +T A ++AI + Q+ PPG++LT +
Sbjct: 35 FSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSF 94
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLA-ENATDVGI 107
L SH TL I AT+L ++P + R+ +++ N TDV I
Sbjct: 95 NLTSHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVI 154
Query: 108 TG-GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
TG G ++GQ + W+ RP L+ L +N+ + N+ L
Sbjct: 155 TGNNGTINGQGQYW-------------WDKFKKKQFKITRPYLIEILFSKNIQISNITLI 201
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W +H V C++ ++ +++ PN DGI+ + NT+I I +GDD I K+
Sbjct: 202 DSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKS 261
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 46/285 (16%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKPC-QVRFPPGEYLTATIRLKSHVTLN 71
+ + +FG GDG+ +T A + + A G+K Q+ PPG +LTA L SH+TL
Sbjct: 70 VFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLF 129
Query: 72 IHEDATLLG---------GPRIEDY--------PEESSRWYVVLAENATDVGITG-GGVV 113
+ DA +L P + Y P SS ++ +N DV ITG G +
Sbjct: 130 LARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSS---LIHGQNLVDVVITGHNGTI 186
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+GQ + TK K + NHT R LV L N+ + N+ LR+ +W L
Sbjct: 187 NGQGQTW-WTKYRQKLL----NHT--------RGPLVQILWSSNIVISNITLRDSPFWTL 233
Query: 174 HIVRCDNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK------- 225
H C N ++ ++I + PN DGID + + +I I GDDAI K
Sbjct: 234 HPYDCKNVTVKKVTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 293
Query: 226 -TYTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
TY P N+ + +R+ SA I +GS ++ +NI +
Sbjct: 294 ITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILV 338
>gi|253689733|ref|YP_003018923.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756311|gb|ACT14387.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 444
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
HS+ + DG+ DTA Q AID A G + PG YL + L S+ L +
Sbjct: 3 HSIQSYSPAADGVTPDTAIFQQAIDRIAAQGGGT---LTVEPGRYLLGGLLLPSNFCLQL 59
Query: 73 HEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L+ E + + E S + A ++ I G G + G A + +
Sbjct: 60 EAGAELIVSGDYEQFTQATTISMAELSHRAFLYAYQQRNITICGQGKIMGNADAYFSVEP 119
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + + H RPR+V F C ++ + + + W +H+V C + +
Sbjct: 120 DAQGYRLPAQH---------RPRIVVFEDCEHIRLCDFTIEHAPMWTVHLVSCRHVIVER 170
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDS 239
++I D + N D +D++ I+ + DDA+C KT P + + ++
Sbjct: 171 LTIDNDLSMANTDALDLDSCQQVQISNCSLSAADDALCIKTTNKPPHLQRKVQQVVISNC 230
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+KS A+K+G+ ++ D + + N I
Sbjct: 231 LLRSKSCALKVGTETFADIEDISVSNCAI 259
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 107/261 (40%), Gaps = 48/261 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
H ++ D+GA GDG++ +T A AI+AC V PPG +LT I+L+S + L+
Sbjct: 19 HTVTITDYGAVGDGVYDNTQAFHQAIEACAKAGGGTLV-IPPGIWLTGPIKLQSRIELHA 77
Query: 73 HEDATLLGGPRIEDYP-----EESSRWYVVLA----ENATDVGITGGGVVDG-------- 115
A ++ EDYP E + + + E DV ITGGG+ DG
Sbjct: 78 SAGAFVMFSKFFEDYPILMSTYEGRQMFRCQSPLDGEGLEDVAITGGGIFDGSGEAWRPV 137
Query: 116 --------QAMKFVVTKNEIKNVMVSWNHTGACSGDE----------------------C 145
Q + + + + + + W A G E
Sbjct: 138 KRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYEPVRDYL 197
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ C+ + + + A WCLH + I+++++ + N DG+DI+
Sbjct: 198 RPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSC 257
Query: 206 NNTVITRVQIDTGDDAICPKT 226
+ D GDDAIC K+
Sbjct: 258 KYVTVENSSFDVGDDAICLKS 278
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 6 LLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF--PPGEYLTATIR 63
L S H S+ +FGA GDG+ +T A Q+A+ + + P G++LT +
Sbjct: 34 LASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFD 93
Query: 64 LKSHVTLNIHEDATLLGG-----PRIEDYP------EESSRWY--VVLAENATDVGITG- 109
L SH+TL + + AT+LG P ++ P E R + ++ +N TDV ITG
Sbjct: 94 LISHLTLWLDKGATILGSTAKNWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGE 153
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DGQ V W G + RP LV + + + N+
Sbjct: 154 NGTIDGQG-----------TVWWDWFRNGEL--NYTRPHLVELMNSTGLIISNLTFLNSP 200
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V C + +++++I +PN DG+D + S N I I TGDD + K+
Sbjct: 201 FWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKS 257
>gi|86361024|ref|YP_472911.1| polygalacturonase [Rhizobium etli CFN 42]
gi|86285126|gb|ABC94184.1| probable polygalacturonase protein [Rhizobium etli CFN 42]
Length = 454
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 26/254 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
+T +Q+AID ++ G + +RL+S V L++ A L P Y
Sbjct: 16 NTDGLQAAIDTLSASGGG-RLELLAGIHRCQGLRLRSGVDLHLAAGAILRPVPDYAAYAH 74
Query: 89 -------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A +A + +TG G ++ F+ +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-ARDARRISLTGEGRIEAGCESFITGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V GC V + +V + W LH V C + +R ++I D PN DGI
Sbjct: 127 --EFRPRVVVLEGCDEVEISSVTISRSPMWTLHFVNCTDVAVRSVTIENDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ VI I T DD IC KT GP N+ ++++ S A+K+G+ +
Sbjct: 185 LDACRGAVIEDCNISTADDGICLKTSIGPEGVAIGRCENILVRRCFVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDNITI 268
D ++F++ ++
Sbjct: 245 HGDVTNVLFEDCSV 258
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 116/274 (42%), Gaps = 34/274 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDG DT IQ+AI ACP K +V P G Y ++ LKS++ L + +
Sbjct: 84 NVRDFGATGDGKQDDTKFIQAAILACP---KESRVLIPKGSYRITSLFLKSNLRLELAKG 140
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF---VVTKNEIKNVMV 132
A L+ YP+ + + E+ + G G +G + ++T +++NV++
Sbjct: 141 AELIADTDRAVYPK-----FPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLI 195
Query: 133 S--------------WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
W + G RPRL C+NV + V + W LH
Sbjct: 196 YGRGTINGNASKENWWKNPKVMVG-AFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFS 254
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
DN ++I ++PN DG+D E N I V+ GDD I K+ Y P
Sbjct: 255 DNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTP 314
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFD 264
N+ + A+ +GS K LV +
Sbjct: 315 SENIHIRQCLMENGHGAVTVGSEMAGGVKNLVVE 348
>gi|206578536|ref|YP_002237168.1| polygalacturonase family protein [Klebsiella pneumoniae 342]
gi|206567594|gb|ACI09370.1| polygalacturonase family protein [Klebsiella pneumoniae 342]
Length = 446
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 23/258 (8%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
DG+ DTA Q A+D V G Y +R+ S+ L + A L+
Sbjct: 12 ADGVTPDTALFQQALDELAEAGGGTLV-VDHGRYALGGLRIGSNTCLWLSPGAELIVSEN 70
Query: 84 IEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
+D+ + E S + A +A +V I GGG + G A + ++V +
Sbjct: 71 GDDFTQAVALSQAECSHRAFLYALDAQNVSICGGGEIYGSADGWFS-----RDV----DA 121
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
G + RPR++ CR V + N+ +R W +H+V C I +++ D N
Sbjct: 122 MGYRQPVKRRPRIILLENCRGVRLENITVRHAPMWTIHLVSCIGVTINGITVDNDLTMAN 181
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTATDSWIRTKSSAIKL 250
D +DI+ I DDAIC KT PL +T + +R+KS A+K+
Sbjct: 182 TDALDIDSCQQVHIANSYFSAADDAICLKTTAKPAHIQRPLRQVTIVNCTLRSKSCALKI 241
Query: 251 GSASWFDFKALVFDNITI 268
G+ +W D + ++ N TI
Sbjct: 242 GTETWQDIEDVLVSNCTI 259
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V DFGA G+G DT IQ+AI ACPP + V PPG+Y ++ LKS+ L +
Sbjct: 82 VLNVRDFGASGEGERDDTVFIQAAIMACPPEGR---VVIPPGKYRVTSLFLKSNSNLELE 138
Query: 74 EDATLL--GGP-RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
E A L+ G P R+ P S EN+ +G G D A F E N+
Sbjct: 139 EGAVLIYDGRPGRLPILPGLLSGK----GENSLALGSWEGEAADMYAALFTGCGAENVNL 194
Query: 131 MVSWNHTGACSGDE-----------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
G S ++ RPR++ C+++ V +R WC+H C
Sbjct: 195 YGKGEILGGASMEDWWSEENRQSSPHRPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCS 254
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+ I D+ I ++PN DGI+ E + I GDD I K+ G
Sbjct: 255 DLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKG 304
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H S+ ++G GDG +T A QSA+D + Q+ P G++LT + L SH TL
Sbjct: 43 HSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTL 102
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+H+DA LL + +YP R+ ++ N +DV ITG G +DG
Sbjct: 103 FLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDG 162
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + + + N+ + W +H
Sbjct: 163 QGSFW-------------WQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHP 209
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N ++ ++I +PN DGI+ + NT I I +GDD I K+
Sbjct: 210 VYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKS 260
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-ATIRLKSHVTLNI 72
I+ V +GAK D AI AI+ C N V P G Y + I LKS+V L+I
Sbjct: 50 IYDVTAYGAKSDTSFDSRPAILEAINQCNT-NGGGTVLIPAGNYFSKGAILLKSNVNLHI 108
Query: 73 HEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ-AMKF- 120
+ A L DY P ++W + A T+V +TG G +DG A+ F
Sbjct: 109 ADGARLEFSTVASDYLPMVLTKWEGTECFNYSPFIYAYQCTNVALTGKGTIDGNGAVTFN 168
Query: 121 -----------VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
+ + I ++ V G G RP ++ F GC+NV V +V++ +
Sbjct: 169 GWHALQGPALDRLRQMGIDSIPVYERVFG--EGYYLRPCMIQFYGCKNVLVEDVQIYDSP 226
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V CDN +R+ +Y D N NNDG D E S N +I + + GDD I K+
Sbjct: 227 FWIIHPVFCDNVTVRN--VYIDSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKS 281
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V+D+GA DG+ +T I C V P G Y T I L ++V L++ E
Sbjct: 58 NVMDYGAISDGVFDNTVVFNKTIKTCSEKGG-GMVLIPKGTYFTGPIHLDNNVNLHLSEG 116
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAM-------- 118
A ++ +DYP E + ++ A N T+V ITG G+++G+A
Sbjct: 117 AEIVFSTNPKDYPLVHTSFEGTELMNYSPLIYAYNKTNVAITGKGILNGKASNDNWWPWC 176
Query: 119 -------KFVVTKNEIKNVMVSWNHTGACS------GDECRPRLVGFLGCRNVNVWNVRL 165
K +K +M S A G+ RP + F C+NV++ + ++
Sbjct: 177 GKSVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNFIEFFECKNVHLKDFKI 236
Query: 166 REPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+W +H ++ ++ + + I + + PNNDG D E S N +I DTGDD I K
Sbjct: 237 VNAPFWIIHPIKSNHVIVDGIHI--ESHGPNNDGCDPEYSKNVIIRNCTFDTGDDCIAIK 294
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGA G +T AI +AIDAC +V P G +LT + KS++ L + E+
Sbjct: 55 KITDFGAVPGGEVDNTKAIAAAIDACNKAGGG-RVVVPAGIWLTGPVHFKSNINLCLEEN 113
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG---------- 115
A L EDY P + W ++ A +V I+G G +
Sbjct: 114 AVLSFTDNPEDYLPAVMTSWEGLECYNYSPLLYAFECENVAISGKGTLQPKMGTWKVWFK 173
Query: 116 ------QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
QA+K + TK ++ A + RP L+ F C+NV + ++RE
Sbjct: 174 RPAPHLQALKELYTKASTNVPVIE--RQMATGENHLRPHLIHFNRCKNVMLDGFKIRESP 231
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 232 FWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 286
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT + KS+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPVHFKSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIKA 284
>gi|238784759|ref|ZP_04628762.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
gi|238714355|gb|EEQ06364.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
Length = 608
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 125/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVEIPSGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
ATLLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGATLLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWQRAKTTEITDELGRPLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQQQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 28/262 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDF A D T AIQ AID+ G+ V P G +LT + LKS +TL + +D
Sbjct: 5 NIIDFDAVPDATSLSTQAIQRAIDSAAEGDT---VLIPAGRFLTGALFLKSKMTLELAKD 61
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAM----KFVV 122
A LLG ++EDYPE ++R W + +V + G G +DGQ KF
Sbjct: 62 AVLLGSQQLEDYPEIATRVAGIDMVWPTAMLNINQCRNVTVCGSGTLDGQGAVWWHKF-W 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ + G D RPR + V + + ++ +W LH+
Sbjct: 121 GDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNLHVCYSK 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNL---TA 236
++ +++ + P+ DGIDI+ S + + DD IC K+ G TA
Sbjct: 181 QVNLQRLNVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTA 239
Query: 237 TDSWIR----TKSSAIKLGSAS 254
D IR K S I LGS +
Sbjct: 240 RDIIIRDCTLLKGSGITLGSET 261
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 40/266 (15%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
++++ DFG GD + +T A + AI A K Q+ P G +LTA L SH+TL
Sbjct: 74 VYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLF 133
Query: 72 IHEDATLLG---------GPRIEDY----PEESSRW-YVVLAENATDVGITG-GGVVDGQ 116
+ +DA +LG P + Y +R+ ++ +N DV ITG G ++GQ
Sbjct: 134 LDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGHNGTINGQ 193
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W + R LV + ++ + N+ LR+ +W LH
Sbjct: 194 GQTW-------------WKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
Query: 177 RCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
C N I++++I F PN DGID + + VI I GDD I K+ Y
Sbjct: 241 DCKNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAY 300
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGS 252
P N+ + IR+ SA + +GS
Sbjct: 301 GRPSVNILIRNLVIRSMVSAGVSIGS 326
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT + KS+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPVHFKSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIKA 284
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++V D+GA DG+ +T AIQ AID C N V F PG+YLT ++ LK V I +
Sbjct: 46 YNVADYGAVADGVTMNTKAIQKAIDECAR-NGGGTVTFSPGKYLTGSVYLKEGVHFIIPK 104
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKF----V 121
TLLG ++DYPE ++R W L +V ++G GVV Q F
Sbjct: 105 HTTLLGSTDLKDYPEMNTRVAGIEMQWPSALINVLGQKNVMVSGEGVVHAQGKVFWDSYW 164
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ + + + W C RPR + +V V + R+ +W + I+
Sbjct: 165 AMRKDYEAKGLRWIVDYDCK----RPRTLLVSESSDVTVKGLTFRQAGFWTIQILYSSYC 220
Query: 182 FIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I + + P+ DG+DI+ S+ ++ ID DD C K+
Sbjct: 221 TVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKS 267
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDF A D T AIQ AID+ G+ V P G +LT + LKS +TL + +D
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAIDSASAGDT---VLIPAGRFLTGALFLKSEMTLELAKD 61
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAM----KFVV 122
A LLG R+EDYP+ +R W + + +V + G G DGQ KF
Sbjct: 62 AMLLGSQRLEDYPDIPTRVAGIDMVWPAAMLNINHCRNVTVCGSGTFDGQGAVWWHKF-W 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ + G D RPR V V + + ++ +W LH+
Sbjct: 121 GDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSK 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP---LYNLTA 236
++ + + + P+ DGIDI+ S + + DD IC K+ G TA
Sbjct: 181 QVNLQRLRVM-NATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTA 239
Query: 237 TDSWIR----TKSSAIKLGSAS 254
D IR K S I LGS +
Sbjct: 240 RDIIIRDCTLLKGSGITLGSET 261
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT + KS+V L++ E+
Sbjct: 15 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPVHFKSNVNLHLEEN 73
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 74 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 133
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 134 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 193
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 194 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIKA 246
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GAK G +T AI AI AC +V P GE+LT I LKS++ L + E A
Sbjct: 54 ITKYGAKAGGKKLNTKAIAKAITACHLVGGG-RVVIPKGEWLTGPIHLKSNINLYMEEGA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVV----DGQAMKFVV 122
L DY P + W ++ A + ++ ITG GV+ D + F
Sbjct: 113 VLRFTDTPSDYLPAVMTSWEGMECYNYSPLIYASDCENIAITGKGVLAPKMDTWRIWFAR 172
Query: 123 TKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ ++ + + A + RP L+ CRNV + ++RE +W
Sbjct: 173 PQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFKIRESPFWT 232
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ C +R + + N NNDGID+E S N +I + D GDDA+ K+
Sbjct: 233 IHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKS 284
>gi|116622096|ref|YP_824252.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225258|gb|ABJ83967.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 731
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 37/257 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA+GDG+ DT AI AI+ C V PPG YL+ T+RL+ ++TL +
Sbjct: 27 NVRDFGARGDGVALDTQAINRAIEKCGIAGGGT-VYLPPGTYLSGTVRLRDNITLWLDSG 85
Query: 76 ATLLGGPRIEDYPE--ESSRWY--VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
ATL G + Y + WY +VLA V + G G++DG N+++N
Sbjct: 86 ATLRGTRDLSQYQTAVDGQAWYLALVLASGVHHVAVAGRGIIDG---------NKVRNPK 136
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
G P + R+ +V +V +++ + L + + I +++ G
Sbjct: 137 GEERMRG--------PHALLIYNVRDGSVRDVSIQDAGNYALIVRSSERLNIDGITVRGG 188
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLG 251
+ DGI++ D+ N I +I +GDD++ + N+T ++ + + ++AI+ G
Sbjct: 189 W-----DGINMHDTRNATIANCRISSGDDSLAGAYWE----NVTVSNCILNSSANAIRAG 239
Query: 252 SASWFDFKALVFDNITI 268
+ ++F+N+ I
Sbjct: 240 G------RNVLFNNLVI 250
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S++DFG GDG +T A Q A+ Q+ P G++LT + L SH TL
Sbjct: 61 HSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTL 120
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H DA LL I +P + R+ ++ N TDV ITG G +DG
Sbjct: 121 FLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDG 180
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 181 QGGLW-------------WQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP 227
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 228 VYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 278
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 51/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
S+ DFGA DG+ TAA + AI D G +V P G +LT I LKS++ L++ +
Sbjct: 75 SITDFGAVSDGLTKSTAAFEKAIADVVAKGG--GKVIVPRGMWLTGPIVLKSNINLHVED 132
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MK 119
A +L +DYP + + + + +V ITG GV+DG K
Sbjct: 133 GALVLFSKDFDDYPLVKTSFEGLNTFRCQSPISGRDLENVAITGKGVIDGNGDAWRPVKK 192
Query: 120 FVVTKNEIKNVMVS----------WNHT-----GACSG------------------DECR 146
+T+++ K ++ S W T GA +G D R
Sbjct: 193 GKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVPLDLTEKEQFEPIKDFMR 252
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P +V + C+ V + + W +H + C++ IR++++ + + N DG+D+E
Sbjct: 253 PVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLESCK 312
Query: 207 NTVITRVQIDTGDDAICPKT 226
N+VI D GDDAIC K+
Sbjct: 313 NSVIYNNTFDVGDDAICIKS 332
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GAK G +T AI AI AC +V P GE+LT I LKS++ L + E A
Sbjct: 54 ITKYGAKAGGKKLNTKAIAKAITACHLVGGG-RVVIPKGEWLTGPIHLKSNINLYMEEGA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVV----DGQAMKFVV 122
L DY P + W ++ A + ++ ITG GV+ D + F
Sbjct: 113 VLRFTDTPSDYLPAVMTSWEGMECYNYSPLIYASDCENIAITGKGVLAPKMDTWRIWFAR 172
Query: 123 TKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ ++ + + A + RP L+ CRNV + ++RE +W
Sbjct: 173 PQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFKIRESPFWT 232
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ C +R + + N NNDGID+E S N +I + D GDDA+ K+
Sbjct: 233 IHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKS 284
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 100/248 (40%), Gaps = 46/248 (18%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLA 99
+V P G + + I LKS+V L++ DAT+L R +DYP +RW +V A
Sbjct: 97 RVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIVFTRWEGMELMNYSPLVYA 156
Query: 100 ENATDVGITGGGVVDGQA---------------------------MKFVVTKNEIKNVMV 132
+V +TG G +DGQA ++ V
Sbjct: 157 HGQENVALTGAGTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPARARLFQMAEANV 216
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
S GD RP V F C V + V+LR +W +H V C N +R + I+G
Sbjct: 217 SPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVVRGVDIHG-- 274
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAIC--------PKTYTGPLYNLTATDSWIRTK 244
PNNDG D E + +I + DTGDD I + P N+ D ++
Sbjct: 275 LGPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCRMKEG 334
Query: 245 SSAIKLGS 252
+ +GS
Sbjct: 335 HGGVVVGS 342
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S++DFG GDG +T A Q A+ Q+ P G++LT + L SH TL
Sbjct: 49 HSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTL 108
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H DA LL I +P + R+ ++ N TDV ITG G +DG
Sbjct: 109 FLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDG 168
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 169 QGGLW-------------WQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP 215
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 216 VYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 266
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+++ DFGA GDG +TAA + A++A Q+ PPG +LTA L SH+TL +
Sbjct: 77 YNITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
Query: 73 HEDATLLG---------GPRIEDYPEESSR-----WYVVLAENATDVGITG-GGVVDGQA 117
E A +LG P + Y R ++ +N DV ITG G ++GQ
Sbjct: 137 AEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQG 196
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
V W + RP LV + +++ V N+ LR +W LH
Sbjct: 197 -------------EVWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYD 243
Query: 178 CDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYN 233
C N + +++I + PN DGID + + +I I GDDAI K+ G Y
Sbjct: 244 CTNVTVSNVTIMSPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYG 303
Query: 234 LTATDSWIRT------KSSAIKLGSASWFDFKALVFDNITI 268
++D IR S+ I +GS + +N+ I
Sbjct: 304 RPSSDILIRNVTARSLVSAGISIGSEMSGGVANVTVENVRI 344
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDF A D T AIQ AID+ G+ V P G +LT + LKS +TL + +D
Sbjct: 5 NIIDFAAVPDATSLSTQAIQRAIDSASAGDT---VLIPAGRFLTGALFLKSEMTLELAKD 61
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAM----KFVV 122
A LLG R+EDYP+ +R W + + +V + G G DGQ KF
Sbjct: 62 AMLLGSQRLEDYPDIPTRVAGIDMVWPAAMLNINHCRNVTVCGSGTFDGQGAVWWHKF-W 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ + G D RPR V V + + ++ +W LH+
Sbjct: 121 GDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSK 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP---LYNLTA 236
++ + + + P+ DGIDI+ S + + DD IC K+ G TA
Sbjct: 181 QVNLQRLRVM-NATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTA 239
Query: 237 TDSWIR----TKSSAIKLGSAS 254
D IR K S I LGS +
Sbjct: 240 RDIIIRDCTLLKGSGITLGSET 261
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+IDFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLIDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+++DA LL I ++P + R+ ++ N TDV +TG G +DG
Sbjct: 113 YLNKDAFLLASQDIREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q F K + K + + RP L+ + + + N+ L W +H
Sbjct: 173 QGA-FWWQKFQKKKLKYT------------RPYLIELMFSDKIQISNLTLLNSPSWNVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V N I+ ++I +PN DGI+ + NT I I +GDD + K+ +
Sbjct: 220 VYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKF 279
Query: 228 TGPLYNLTATD-SWIRTKSSAIKLGS 252
P L + I +S+AI LGS
Sbjct: 280 GWPTKQLVIRRLTCISPESAAIALGS 305
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A ++AI + + PPG YLT + L SH+TL +
Sbjct: 44 SIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLS 103
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
+DA + P I P R+ + A+ DV ITG G +DGQ
Sbjct: 104 KDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTIDGQGE 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP L+ + RN+ + NV R+ +W +H V C
Sbjct: 164 -------------VWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++ ++I ++PN DGID + S+N I I TGDD + K+
Sbjct: 211 RNVVVQFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 258
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA G +T AI SAI+AC +V P G +LT I KS+V L + E+A
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQSGGG-RVVVPAGTWLTGPIHFKSNVNLYLEENA 113
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 114 VLNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 173
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 174 PQSHLEALKELYTKASTNIPVIE--RQMAIGENHLRPHLIHFNRCKNVLLDGFKIRESPF 231
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 232 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
>gi|159472068|ref|XP_001694178.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277345|gb|EDP03114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 546
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 46 KPCQVRFPPGE-YLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATD 104
K V F PG YL ++ L V L + D L Y WY++ +
Sbjct: 17 KAGMVLFAPGRTYLLGSLLLSGSVQLVVPADTVLQASAERSSYGRTQHTWYLLYFLGCRN 76
Query: 105 VGITGGGVVDGQAMKFVVTK---------------------------NEIKNVMVS-WNH 136
++GGG V G A F+ + + + VS W
Sbjct: 77 CSLSGGGTVRGCAEAFMPPQLPPQPQPQAPLPAADAGSAGTAGSGHVEDTSGMDVSNWAD 136
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPN 196
+CRPRLVG +GC +V + +V L + A+W LH+ R + + + + G+ PN
Sbjct: 137 PSCRVRRQCRPRLVGLVGCEHVALSDVALADSAFWTLHVRRSRHVELSGLRVSGNRRFPN 196
Query: 197 NDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGSASWF 256
NDGIDI+ S + I + T DDA ++ D +R++S+A+KLGS S
Sbjct: 197 NDGIDIDGSAHVTIRNCTVSTADDA-----------HVLVEDCVLRSRSAAVKLGSESRA 245
Query: 257 DFKALVFDNI 266
D + F +
Sbjct: 246 DMTNITFRRV 255
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 119/270 (44%), Gaps = 22/270 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V FGA GDG DTAAI AIDA V PG YLT + LKS+VTL++ A
Sbjct: 24 VKTFGAAGDGKKKDTAAIARAIDAAAKAGGGTVV-VSPGRYLTGALTLKSNVTLDVEAGA 82
Query: 77 TLLGGPRIEDYPEESSRW-------YVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
TLLG P EDYP + W ++ A+ A + I G G +DGQ +
Sbjct: 83 TLLGSPDPEDYPLRENVWGEKKEYSSLIYADGAVHITIRGRGTIDGQGQAWWKRMGWPDR 142
Query: 130 VMVSWNHTGACSGDEC------RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
++ A E RP ++ + ++V + + L A W ++ + C+ I
Sbjct: 143 RKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTVNPLLCEFVRI 202
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLT 235
++I +PN DGI+ E N I +ID GDD + K+ P N+T
Sbjct: 203 DGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENIT 262
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
T+ + A+ +GS + +V N
Sbjct: 263 ITNCVMLKGHGAVTIGSEMSGGVRNVVVSN 292
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GAK G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAIEACHKSGGG-RVVVPAGIWLTGPIHFKSNVNLYLEENA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 113 ILNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 172
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 173 PQPHLEALKELYTKASTDVPVIE--RQMAVGENHLRPHLIHFNRCKNVLLDGFKIRESPF 230
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 231 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ---VRFPPGEYLTATIRLKSHVTLNI 72
SV +FGA GDG +TAA + A+ + PPG +LT + L S TL +
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 73 HEDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQA 117
H A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 118 -MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
M + + +N + NHT R L+ + NV + +V L +W +H V
Sbjct: 209 HMWWELWRNR------TLNHT--------RGHLIELVNSTNVLISSVTLSNSPFWTVHPV 254
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N ++D++I + PN DGID + S+ I I++GDD + K+
Sbjct: 255 YCSNVVMKDLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKS 304
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA G +T AI SAI+AC +V P G +LT I KS+V L + E+A
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQSGGG-RVVVPAGTWLTGPIHFKSNVNLYLEENA 113
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 114 VLNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 173
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 174 PQPHLEALKELYTKASTNIPVIE--RQMAIGENHLRPHLIHFNRCKNVLLDGFKIRESPF 231
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 232 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 117/292 (40%), Gaps = 49/292 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +FGAKGD +T +I SAI C + P G YLT I L S++T+ I
Sbjct: 4 NITEFGAKGDSNTDNTESISSAIKRCADSGGG-TLYIPAGTYLTGPISLISNLTIYIESG 62
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
A L+ YP +RW ++ T+V I G G +DGQ
Sbjct: 63 AKLVFIDDFSAYPPVKTRWSGYECYGFSPLLYGNGLTNVSIIGSGCIDGQGEAWWEVNHL 122
Query: 118 -----------MKFVVTKN----EIKNV-MVSWNHTGACSGDECRPRLVGFLGCRNVNVW 161
K + N E KN +V W RP L+ C +V +
Sbjct: 123 LRKGEEYDHPQTKEIAELNKSITEPKNTNLVEW------PSQFLRPPLLQMYDCDSVTLD 176
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
+ L +W H V CDN I ++ ++TPN DG+D++ +N ++ D GDD
Sbjct: 177 GITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGDDC 236
Query: 222 ICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
+ K+ P N+ T+ ++ I +GS + + + N
Sbjct: 237 LAFKSGINEDGRRVARPTENVAVTNCTMKNGHGGIVMGSENSGGIRNIAVSN 288
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 102/259 (39%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFG GDGI+ +T A AIDA + P G +LT I+ KS++ L++ +
Sbjct: 48 KITDFGGIGDGIYLNTQAFSKAIDALS-AKGGGMLTVPAGIWLTGPIQFKSNINLHLEDR 106
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L P YP + + + +N T++ ITG G +DG + K +
Sbjct: 107 AIILFSPDKNLYPIVETSFEGLDTRRCQSPIWGKNLTNIAITGSGAIDGNGQFWRPLKKQ 166
Query: 127 IKNVMVSWNHTGACSG---------------------------------------DECRP 147
K W T + G D RP
Sbjct: 167 -KVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEEWQSVRDFLRP 225
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V F C+NV + V + W +H + C+N I + + N DG+D+E N
Sbjct: 226 VMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGDGLDLESCKN 285
Query: 208 TVITRVQIDTGDDAICPKT 226
++ D GDD IC K+
Sbjct: 286 VIVVNSSFDVGDDGICLKS 304
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S++DFG GDG +T A Q A+ Q+ P G++LT + L SH TL
Sbjct: 47 HSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTL 106
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H DA LL I +P + R+ ++ N TDV ITG G +DG
Sbjct: 107 FLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDG 166
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 167 QGGLW-------------WQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP 213
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 214 VYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 264
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 30/235 (12%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKS 66
T H S+ ++G GDG +T A QSA+D + Q+ P G++LT + L S
Sbjct: 39 TCRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTS 98
Query: 67 HVTLNIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-G 111
H TL +H+DA LL + +YP R+ + N +DV ITG G
Sbjct: 99 HFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNG 158
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DGQ + W RP L+ + + + N+ + W
Sbjct: 159 TIDGQGSFW-------------WQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSW 205
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V N ++ ++I +PN DGI+ + NT I I +GDD I K+
Sbjct: 206 NIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKS 260
>gi|340347659|ref|ZP_08670764.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
gi|339608853|gb|EGQ13736.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
Length = 502
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L LL+ T ++ + GDG +TAAIQ +D ++ F G YLT +
Sbjct: 13 LCLLVQTAAARDYAAEKYHIVGDGTTMNTAAIQQLVDRVSR-EGGGRIVFGHGRYLTGSF 71
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY------------PEESSRWYVVLAENATDVGITGG 110
++S+V +++ AT+LG DY +++ + ++ A ++ TG
Sbjct: 72 HMRSNVEVHVERGATILGSTSPFDYFNVTAHSGSETDRMDNAHLGLFVSHRARNISFTGE 131
Query: 111 GVVDGQAMKFVVTKNEIKN----VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
G +DGQ + + + + + V +N + RP L + + + LR
Sbjct: 132 GTIDGQGLALALAADSLHHAGAYVDAHYNTRRMRPSELVRPTLFYLAETDGIRIEQLHLR 191
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W L N IR + ++ + NNDGID+ D +T I++ DD IC K+
Sbjct: 192 NSSNWGLSFNMSRNITIRGIDLH-NRAYWNNDGIDLTDCQRVTVTGCCINSADDGICLKS 250
Query: 227 YTGPLYN--LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
Y N + + IR+ +SAIK G+ S+ F+ + +I +
Sbjct: 251 YNPDSGNDSIDVSHCEIRSSASAIKFGTGSYGGFRHVSIRHIRV 294
>gi|433652543|ref|YP_007296397.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|433303076|gb|AGB28891.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 526
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L LL+ T ++ + GDG +TAAIQ +D ++ F G YLT +
Sbjct: 37 LCLLVQTAAARDYAAEKYHIVGDGTTMNTAAIQQLVDRVSR-EGGGRIVFGHGRYLTGSF 95
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY------------PEESSRWYVVLAENATDVGITGG 110
++S+V +++ AT+LG DY +++ + ++ A ++ TG
Sbjct: 96 HMRSNVEVHVERGATILGSTSPFDYFNVTAHSGSETDRMDNAHLGLFVSHRARNISFTGE 155
Query: 111 GVVDGQAMKFVVTKNEIKN----VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
G +DGQ + + + + + V +N + RP L + + + LR
Sbjct: 156 GTIDGQGLALALAADSLHHAGAYVDAHYNTRRMRPSELVRPTLFYLAETDGIRIEQLHLR 215
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ W L N IR + ++ + NNDGID+ D +T I++ DD IC K+
Sbjct: 216 NSSNWGLSFNMSRNITIRGIDLH-NRAYWNNDGIDLTDCQRVTVTGCCINSADDGICLKS 274
Query: 227 YTGPLYN--LTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
Y N + + IR+ +SAIK G+ S+ F+ + +I +
Sbjct: 275 YNPDSGNDSIDVSHCEIRSSASAIKFGTGSYGGFRHVSIRHIRV 318
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKPC-QVRFPPGEYLTATIRLKSHVTLN 71
+ + +FG GDG+ +T A + + A G+K Q+ PPG +LTA L SH+TL
Sbjct: 75 VFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLF 134
Query: 72 IHEDATLLG---------GPRIEDY--------PEESSRWYVVLAENATDVGITG-GGVV 113
+ D+ +L P + Y P SS ++ +N DV ITG G +
Sbjct: 135 LARDSVILAVQDEKYWPLMPALPSYGYGREHPGPRYSS---LIHGQNLRDVVITGHNGTI 191
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+GQ + TK K + NHT R LV L N+ + N+ LR+ +W L
Sbjct: 192 NGQGQTW-WTKYRQKLL----NHT--------RGPLVQILWSSNIVISNITLRDSPFWTL 238
Query: 174 HIVRCDNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK------- 225
H C N +++++I + PN DGID + + +I I GDDAI K
Sbjct: 239 HPYDCKNVTVKNVTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 298
Query: 226 -TYTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
TY P N+ + +R+ SA I +GS ++ +NI +
Sbjct: 299 ITYGRPSKNIVIRNLVVRSNVSAGISIGSEMSGGVSNVLVENILV 343
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FG GDG+ +T A Q+A++ + Q+ P G++LT + L SH TL
Sbjct: 64 HTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHFTL 123
Query: 71 NIHEDATLLGG------PRIEDYP------EESSRWYV--VLAENATDVGITGG-GVVDG 115
+H+DA LL P +E P + S Y+ + N TDV ITG G +DG
Sbjct: 124 FLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTIDG 183
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ W RP L+ + ++ + ++ L W +H
Sbjct: 184 QGDRW-------------WQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHP 230
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + N I I +GDD + K+
Sbjct: 231 VYSSNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKS 281
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A QSAI + Q+ PPG++LT + L SH TL
Sbjct: 51 HSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+H+DA +L ++P+ R+ ++ + TDV ITG G +DG
Sbjct: 111 FLHKDAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + RP ++ + + + N+ L W +H
Sbjct: 171 QGSYW-------------WDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I+ ++I ++PN DGID + NT I I +GDD + K+
Sbjct: 218 IYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKS 268
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FG GDG+ +T A Q+A++ + Q+ P G++LT + L SH TL
Sbjct: 64 HTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHFTL 123
Query: 71 NIHEDATLLGG------PRIEDYP------EESSRWYV--VLAENATDVGITGG-GVVDG 115
+H+DA LL P +E P + S Y+ + N TDV ITG G +DG
Sbjct: 124 FLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTIDG 183
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q ++ W RP L+ + ++ + ++ L W +H
Sbjct: 184 QGDRW-------------WQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHP 230
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + N I I +GDD + K+
Sbjct: 231 VYSSNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKS 281
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHE 74
+V GAKGD I A+ C N V P G Y L I S+V L I +
Sbjct: 45 NVAKLGAKGDSISNSKPFFDKAMALCKKNNGGTIV-VPKGIYFLNGPIHFVSNVNLKIEK 103
Query: 75 DATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK----F 120
A + E+Y P + W ++ A + T++ I+G G +DG+ K F
Sbjct: 104 GAKIKFSDNPENYLPMVLTSWEGTMIYNYSPLIYAYDCTNIAISGEGTIDGEGGKTWKSF 163
Query: 121 VVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+ + K + NH +G RP+++ F C+N+ V N+R+ +WCL
Sbjct: 164 KDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVENIRIENSPFWCL 223
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H+++ ++ +R +S Y N NNDGID E + + +I V + GDD I K
Sbjct: 224 HLLKSESITVRGIS-YKSLNY-NNDGIDPEYAKDVLIENVTFNNGDDNIAIKA 274
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A + A+ + + P G +LT + L SH+TL +
Sbjct: 46 SITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHMTLFLA 105
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWYVVLAENA-TDVGITG-GGVVDGQAM 118
A L P +E P +R+ + N DV ITG GV+DGQ
Sbjct: 106 RGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVIDGQGE 165
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + + RP LV F+ +++ N+ L+ +W +H V C
Sbjct: 166 -------------VWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYC 212
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
DN + +M I ++PN DGID + S+N I I TGDD + K+
Sbjct: 213 DNVVVTNMMILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKS 260
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIH 73
+ + DFGA GDG A + AI C N ++ P G Y + + KS+V +++
Sbjct: 47 YVITDFGAVGDGKTLCKEAFEKAITICS-DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 74 EDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT 123
+ A L DY P +RW ++ A + ++ +TG G V+G K
Sbjct: 106 KGAILDFSTNESDYLPAVITRWEGTELFNYSPLIYAYHVQNIALTGEGTVNGNGSKKFSP 165
Query: 124 KNEIKNV----MVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
N I+ V + T G + RP + GC NV + V + + +W
Sbjct: 166 WNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIMDSPFWV 225
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + C+N +R++++ D + NNDG D E N +I TGDDAI K+
Sbjct: 226 IHPIFCNNVIVRNVTV--DSHNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDA 283
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ + R+K + + +GS + + +NITI
Sbjct: 284 WRIGQPTENVVIRNCSFRSKINGVCIGSEIAGGVRNIFIENITI 327
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFGAKGDG+ +T A + AI+ C +V P G +LT I LKS+V L++ +
Sbjct: 56 YNIADFGAKGDGVTKNTEAFRLAIEKCH-AEGGGRVVVPNGVFLTGAIYLKSNVNLHLTD 114
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
T+L DYP +RW + A ++ ITG G +DG
Sbjct: 115 GTTILFSRDSSDYPIVFTRWEGMECMNYSSFIYAYGEENIAITGKGTLDGNSDNDNWWWW 174
Query: 117 --AMKF----------VVTKNEIKNVM---VSWNHTGACSGDECRPRLVGFLGCRNVNVW 161
A K+ + + +M V G RP V C+N+ +
Sbjct: 175 CGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYNCKNILIE 234
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
++R+ W L+ V C+N I + + + PNNDG D E N +I DTGDD
Sbjct: 235 DIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCYFDTGDDC 292
Query: 222 ICPKT 226
I K+
Sbjct: 293 IAIKS 297
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT I +S+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIVACNKAGGG-RVVIPEGEWLTGPIHFQSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIKA 284
>gi|238789354|ref|ZP_04633140.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
gi|238722497|gb|EEQ14151.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
Length = 596
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 58/304 (19%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSH 67
+T I +V DFGA DG +T AIQ AID+C PG C++ P G Y + + LKS
Sbjct: 138 TTAKPQIVNVRDFGAVDDGKTLNTKAIQQAIDSCKPG---CRIEIPAGIYKSGALWLKSD 194
Query: 68 VTLNIHEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGG 110
+TLN+ ATLLG EDYP + E NA D + ITG
Sbjct: 195 MTLNLQAGATLLGSENPEDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGS 254
Query: 111 GVVDGQA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD-------- 143
G++DG ++V +KN ++ +++ N +
Sbjct: 255 GIIDGNGWLRAKTAEITDELGHPLPQYVASKNSKVHEDGILAKNQVEKAVSEGMDLKNAY 314
Query: 144 -ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
+ R L+ G NV + +R PA+ + + N + I+ ++ N DGI+
Sbjct: 315 GQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEF 373
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--A 253
+S N ++ DTGDD I TG P+ +++ R A+ GS
Sbjct: 374 GNSQNVMVFNNFFDTGDDCINFAAGTGEKAQQQEPMKGAWLFNNYFRMGHGAVVTGSHTG 433
Query: 254 SWFD 257
+W +
Sbjct: 434 AWIE 437
>gi|329849704|ref|ZP_08264550.1| glycosyl hydrolase family 28 family protein [Asticcacaulis
biprosthecum C19]
gi|328841615|gb|EGF91185.1| glycosyl hydrolase family 28 family protein [Asticcacaulis
biprosthecum C19]
Length = 503
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 50 VRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESS------------RWYVV 97
VR GEY++ T+ L+SHV L + + A LLG ++DYPE + ++
Sbjct: 91 VRLSQGEYVSGTLDLRSHVRLEVAKGARLLGSLDLKDYPERVATRPTVMDSNMGMNQSLI 150
Query: 98 LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRN 157
AE ++ + G G +DG+ F + G RP L+ + C+
Sbjct: 151 FAEGCENIALCGEGEIDGRGHNFKGDET--------------IHGTPGRPFLIRVIDCKR 196
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
V++ + L++ W + + CD+ + M++ N NNDG+DI+ ++ I +
Sbjct: 197 VHIHGITLKDSPCWMQNYLNCDDLLVEHMTVENQANF-NNDGLDIDGCRRVIVRDCFISS 255
Query: 218 GDDAICPKTYTGPL-YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GDDAIC K N+ + T +AIK G+ S F+ ++ + I
Sbjct: 256 GDDAICFKGAAQRAGENILIERCKLYTSCNAIKYGTDSQSVFRNVLVRHCEI 307
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 50/263 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ S+ +FGA DGI +T A AI A +V P G +LT I L+S++ L +
Sbjct: 57 YSRSITEFGAVADGITLNTEAFDKAIKAVAE-KGGGKVIVPAGLWLTGPIVLQSNINLYL 115
Query: 73 HEDATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------ 117
E+A +L YP E + A NA ++ ITG GV+DG
Sbjct: 116 EENALVLFTADHTQYPIVKTSFEGLETRRCQSPISALNAENLAITGKGVMDGNGDTWRPV 175
Query: 118 MKFVVTKNEIKNVMVS-----------WNHTGACSG-----------------------D 143
K +T N+ K ++ S + G+ G D
Sbjct: 176 KKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTDEEWNSIRD 235
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP L+ F+ C+ V + V + WCLH + C++ I ++S+ + + N D +D+E
Sbjct: 236 WLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQNGDALDLE 295
Query: 204 DSNNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 296 SCNRALIQNSSFDAGDDGICIKS 318
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ ++GA G +T AI AI AC +V P GE+LT + L S+V L + +
Sbjct: 56 SIANYGAVKGGKTINTKAIAKAIKACNKAGG-GRVVIPAGEWLTGPVHLMSNVNLYLSDG 114
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L EDY P + W +V A + +V ITG G ++D F
Sbjct: 115 AILRFTDNPEDYLPAVMTSWEGMECYNYSPLVYAFDCENVAITGTGTLQPIMDTWRKWFK 174
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++RE +W
Sbjct: 175 RPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKNVLLDQFKIRESPFW 234
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ +Y + NNDG+D+E S N +I + D GDDA+ K
Sbjct: 235 TIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEMSRNFLIEDCKFDQGDDAVVIKA 287
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 47/267 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A Q+AI+ + Q+ PPG++LT + L SH TL +H
Sbjct: 69 SLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHFTLFLH 128
Query: 74 EDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITG-GGVVDGQA- 117
+DA +L D+P + R+ ++ N TDV ITG G +DGQ
Sbjct: 129 KDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGD 188
Query: 118 ---MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
KF K E+K RP LV + NV + N+ L W +H
Sbjct: 189 LWWQKF--HKGELKYT---------------RPYLVEIMYSDNVQISNLTLVNSPSWNVH 231
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPL 231
+ N ++ ++I +PN DGI+ + +T I I +GDD + K+ G
Sbjct: 232 PIYSSNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIA 291
Query: 232 YNLTATDSWIRTK------SSAIKLGS 252
Y + IR S+AI LGS
Sbjct: 292 YGMPTKQLVIRRLTCISPFSAAIALGS 318
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A + AID + Q+ P G++LT + L SH TL
Sbjct: 41 HSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHFTL 100
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+H+DA LL ++++P + R+ ++ N TDV ITG G +DG
Sbjct: 101 YLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + RP L+ + + + N+ L W +H
Sbjct: 161 QGAFW-------------WQNFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V + ++ ++I ++PN DGI+ + NT I I +GDD + K+
Sbjct: 208 VYSRDILVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 258
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 26/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+IDFGA+ H +T AI AI A + +V P G ++T I ++S+V L + +
Sbjct: 27 SIIDFGAQCGPDHVNTMAINQAIKAVSQ-HGGGKVIIPAGYWMTGAIEMQSNVNLYLDYN 85
Query: 76 ATLLGGPRIEDYP--------EESSRWYV-VLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A + I DY S R + + ++ ITG GV DG ++ K
Sbjct: 86 AFVSFTTNISDYRLVDTDFEGSPSKRCIAPISGTHLQNIAITGHGVFDGSGERWRPVKRS 145
Query: 127 IKNVMVSWNHTGACSGD---------------ECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K W + + G RP L+ F C+NV + V + W
Sbjct: 146 -KLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNVKLEGVTFKNSPAW 204
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C+H + C+N I ++ + + N D +D+E N VI D GDDAIC K+
Sbjct: 205 CVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAGDDAICIKS 259
>gi|190894826|ref|YP_001985119.1| putative polygalacturonase [Rhizobium etli CIAT 652]
gi|190700487|gb|ACE94569.1| probable polygalacturonase protein [Rhizobium etli CIAT 652]
Length = 454
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 24/253 (9%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
+T +Q+AID +++ G +L ++L+S V L++ A L E Y
Sbjct: 16 NTDRLQAAIDDLSASGGG-RLKLLAGIHLCRGLQLRSGVELHLAAGAILRPVSDYEAYAH 74
Query: 90 -------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
E S +++A+ A + +TG G ++ F++ +E +
Sbjct: 75 TTVSVIAEKSDRGMIVAKGARRISLTGPGRIEAGCESFIIGDDETVGTFIPA-------- 126
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
E RPR+V F C V + V + W LH V C + +R+++I D PN DGI
Sbjct: 127 -EFRPRVVVFESCDEVEISAVHISRSPMWTLHFVNCTDVAVRNVTIENDRRLPNTDGIVF 185
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ VI I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 186 DACRGAVIEDCTISTADDGICLKTSIGPQGVAIGRCENILIRRCSVQSLSCALKIGTETH 245
Query: 256 FDFKALVFDNITI 268
D +VF++ ++
Sbjct: 246 GDVTNVVFEDCSV 258
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 31/268 (11%)
Query: 15 HSVIDFGA-KGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++++D+GA K G+ A + A G V P G ++T I LKSH+ L +
Sbjct: 4 YNIVDYGAVKDSGVPATAAIAAAITAASEAGGG--TVVVPAGTFVTGAIFLKSHIELRLS 61
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF-VVT 123
A L +DYP SRW + E+ +V +TG G ++G +
Sbjct: 62 PGAVLSFSTNPDDYPVVKSRWEGVQREVHASCIYGEDLENVTVTGSGCINGNGQPWWEKQ 121
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+N + + RP+L+ F CR V + +V L + W ++ +RC N I
Sbjct: 122 RNRPEELHYP------------RPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTI 169
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLTAT 237
++SI ++PN DGI+ E +N I+ ID GDD I K T P N+T T
Sbjct: 170 DNVSILNPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEETAERVPCENITIT 229
Query: 238 DSWIRTKSSAIKLGSASWFDFKALVFDN 265
+ + + +GS + + + N
Sbjct: 230 NCTMIHGHGGVVIGSEMSGNIRNVTISN 257
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ V+ +GA +G +T+AIQ AIDAC V F PG+YLT +I LK +V L I
Sbjct: 45 VFKVLAYGAVNNGTTLNTSAIQKAIDACSAKGGGI-VSFAPGKYLTGSIFLKKNVRLQID 103
Query: 74 EDATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKFVVTK 124
+ LLG ++DYP+ +R W L + +V +TG G+V+ Q F
Sbjct: 104 KGVELLGSQNLDDYPQMDTRIAGIEMKWPAALINIIDQENVAVTGEGLVNAQGKPFW--- 160
Query: 125 NEIKNVMVSWNHTGA---CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI-----V 176
++ N+ ++ G D RPR + G N+ + + L++ +W + + V
Sbjct: 161 DKYWNMRKEYDPKGLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYV 220
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
D +R+ D + P+ DGID++ S +I ID DD C K
Sbjct: 221 TVDGIIVRNNI---DGHGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLK 266
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT + +S+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPVHFQSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TVHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIKA 284
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSAALTDFGGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+ +DA LL I ++P + R+ ++ N TDV +TG G +DG
Sbjct: 113 YLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + N+ + N+ L W +H
Sbjct: 173 QGEFW-------------WQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N ++ ++IY +PN DGI+ + N I I +GDD + K+
Sbjct: 220 VYSSNIIVQGITIYAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKS 270
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+++ DFGA GDG +T A + A++ A Q+ PPG +LTA L SH+TL +
Sbjct: 82 YNLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFL 141
Query: 73 HEDATLLG---------GPRIEDYPEESSR-----WYVVLAENATDVGITG-GGVVDGQA 117
E A +LG P + Y R ++ +N DV ITG G ++GQ
Sbjct: 142 AEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQG 201
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
V W + RP LV + +++ + N+ LR +W LH
Sbjct: 202 -------------EVWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYD 248
Query: 178 CDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YT 228
C N + +++I + PN DGID + S + +I I GDDAI K+ Y
Sbjct: 249 CTNVTVSNVTILSPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYG 308
Query: 229 GPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N++ + R+ SA I +GS + +N+ I
Sbjct: 309 RPSSNISIRNVNARSLVSAGISIGSEMSGGVANVTVENVRI 349
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GAK G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHKSGGG-RVVVPAGIWLTGPIHFKSNVNLYLEENA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V I G G +
Sbjct: 113 ILNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAIIGKGTLQPKMDTWKVWFKR 172
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 173 PQPHLEALKELYTKASTDVPVIE--RQMAVGENHLRPHLIHFNRCKNVLLDGFKIRESPF 230
Query: 171 WCLHIVRCDNTFIRDMSI--YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + +GD NNDGID E S N ++ D GDDA+ K
Sbjct: 231 WTIHLYMCDGGLVRNLDVKAHGD----NNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+ AKGDGI +TAA+Q AIDAC PG+ V P G YLT ++L S + L + E A L
Sbjct: 122 YWAKGDGITKNTAALQRAIDACGPGDA---VYLPAGTYLTGALQLHSDMELYLEEGAVLQ 178
Query: 80 GGPRIEDY-PEESSRW-------YVVL----------AENATDVGITGGGVV--DGQAMK 119
G ++ DY P SR+ Y L N +V I G G + G+A+
Sbjct: 179 GTAQLVDYQPRIPSRFEGIERRCYSSLLNLGKMDHDDGYNCVNVVIRGKGTIAGGGKALA 238
Query: 120 FVVTKNE---IKNVMVS-WNHTGACSGDE-----CRPRLVGFLGCRNVNVWNVRLREPAY 170
+ +E +K+ + + +C ++ RPRLV C+NV + + L++
Sbjct: 239 DAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLSNCQNVWISGLTLKDSPS 298
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
W L ++ DN + D + N DG D + S N + ++ TGDD++ K+ P
Sbjct: 299 WILQMIYSDN-IVTDHCAFHSEGIWNGDGWDPDSSTNCTLFASELYTGDDSVAIKSGKNP 357
Query: 231 LYN 233
N
Sbjct: 358 EGN 360
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA GDG+H T A AIDA ++ P G + T I LKS++ L+I + A +
Sbjct: 54 DFGAVGDGMHLCTEAFAKAIDALDKKGG-GKLTVPAGVWFTGPIVLKSNINLHIEKGAIV 112
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKFVVT 123
L P ++ YP + + + N +V ITG G +DG K VT
Sbjct: 113 LFSPDVDLYPLVETVFEGLDTRRCQSPISGRNLVNVAITGQGAIDGNGHYWRPLKKQKVT 172
Query: 124 KNEIKNVMVS----------WNHTGACSGDE----------------------CRPRLVG 151
+ + K + + GD RP +V
Sbjct: 173 EGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVS 232
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
F+ C+NV + V + W LH + C+N I ++ + N DG+D+E N +I
Sbjct: 233 FIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCKNALIV 292
Query: 212 RVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 293 NSSFDVGDDGICLKS 307
>gi|421592101|ref|ZP_16036849.1| polygalacturonase [Rhizobium sp. Pop5]
gi|403702279|gb|EJZ18884.1| polygalacturonase [Rhizobium sp. Pop5]
Length = 453
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-- 87
+T +Q+ ID+ ++ G ++ +RL+S V L++ A L P Y
Sbjct: 16 NTDRLQAEIDSLSASGGG-RLELLAGIHICRGLRLRSGVDLHLAAGAILRPVPDYAAYLN 74
Query: 88 ------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACS 141
E+S R +V A +A + +TG G ++ F+ +E +
Sbjct: 75 TTVSVIAEKSDRGMIV-ARDARRISLTGEGRIEAGCDSFITGDDETVGTFIPA------- 126
Query: 142 GDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
E RPR+V F GC V + ++ + W LH V C + +R+++I D PN DGI
Sbjct: 127 --EFRPRVVVFEGCDEVEISSIHISRSPMWTLHFVDCTDLTVRNVTIENDRRLPNTDGIV 184
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSAS 254
++ I +I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 185 LDACRGATIENCKISTADDGICLKTSIGPQGVAIGRCENILVRRCTVQSLSCALKIGTET 244
Query: 255 WFDFKALVFDN 265
D +VF++
Sbjct: 245 HGDVTNVVFED 255
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 19 DFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
DFG GDG+ +T A + A I + Q+ PPG +LTA L SH+TL + ED
Sbjct: 91 DFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFNLTSHMTLFLAED 150
Query: 76 ATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDGQA 117
+ +LG +ED P S Y ++ +N D+ ITG G ++GQ
Sbjct: 151 SEILG---VEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHNGTINGQG 207
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ W + R LV + ++ + N+ +R+ +W LH
Sbjct: 208 QSW-------------WKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYD 254
Query: 178 CDNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YT 228
C N IR+++I PN DGID + + VI I TGDDAI K+ Y
Sbjct: 255 CKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYG 314
Query: 229 GPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA + +GS + +N+ I
Sbjct: 315 RPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLI 355
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT I +S+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPIHFQSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIKA 284
>gi|307132357|ref|YP_003884373.1| Polygalacturonase [Dickeya dadantii 3937]
gi|306529886|gb|ADM99816.1| Polygalacturonase [Dickeya dadantii 3937]
Length = 459
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 23/266 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ + DG+ DT Q AID V PG YL +RL S+ L +
Sbjct: 19 SIRSYTPAADGVTPDTELFQRAIDDLTAQGGGTLV-VEPGRYLLGGLRLPSNFCLQLDAG 77
Query: 76 ATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
A L+ +D+ + E S + A ++ + G G + G A + + + +
Sbjct: 78 AELIASACYDDFAQTTTVSVAELSDRAFLYARRQRNITLCGKGKITGNADAYFSAEPDEQ 137
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
+ H RPR++ C VN+ ++ + + W +H+V C + +++
Sbjct: 138 GYRLPAQH---------RPRILVLEDCEQVNLQDLTIEQAPMWTVHLVSCRQVNVERLTV 188
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDSWIR 242
D N D ++++ + + + DDA+C KT P +T + +R
Sbjct: 189 DNDMTMANTDALNLDSCQDVTVHHCHLSAADDALCIKTTAKPPAMQYKAQRMTVSHCRLR 248
Query: 243 TKSSAIKLGSASWFDFKALVFDNITI 268
++S A+K+G+ ++ D + L I
Sbjct: 249 SRSCALKIGTETFADIEDLTVSRCAI 274
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT I +S+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPIHFQSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIKA 284
>gi|212690949|ref|ZP_03299077.1| hypothetical protein BACDOR_00439 [Bacteroides dorei DSM 17855]
gi|212666181|gb|EEB26753.1| hypothetical protein BACDOR_00439 [Bacteroides dorei DSM 17855]
Length = 520
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L L LS H+ + ++DFGA D + T AI AI++C +V
Sbjct: 9 LYLCLSVIHVFAQTKEHGRTGEFNILDFGATRDTMMVHTKAINEAIESCYRQGGG-RVVI 67
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 68 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAVYRSLKDAGGWSALIYAVG 127
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 128 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 174
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 175 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 233
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K +V N +
Sbjct: 234 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIVISNCIV 282
>gi|423229081|ref|ZP_17215486.1| hypothetical protein HMPREF1063_01306 [Bacteroides dorei
CL02T00C15]
gi|423244921|ref|ZP_17225995.1| hypothetical protein HMPREF1064_02201 [Bacteroides dorei
CL02T12C06]
gi|392634834|gb|EIY28746.1| hypothetical protein HMPREF1063_01306 [Bacteroides dorei
CL02T00C15]
gi|392640962|gb|EIY34753.1| hypothetical protein HMPREF1064_02201 [Bacteroides dorei
CL02T12C06]
Length = 515
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L L LS H+ + ++DFGA D + T AI AI++C +V
Sbjct: 4 LYLCLSVIHVFAQTKEHGRTGEFNILDFGATRDTMMVHTKAINEAIESCYRQGGG-RVVI 62
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 63 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAVYRSLKDTGGWSALIYAVG 122
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 123 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 169
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 170 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 228
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K +V N +
Sbjct: 229 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIVISNCIV 277
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GAK G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHKSGGG-RVVVPAGIWLTGPIHFKSNVNLYLEENA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 113 ILNFTDNPFDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 172
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 173 PQPHLEALKELYTKASTDVPVIE--RQMAVGENHLRPHLIHFNRCKNVLLDGFKIRESPF 230
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 231 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|168335159|ref|ZP_02693266.1| glycoside hydrolase, family 28 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 418
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 36/253 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I+++ DFGAKGD + DT ++Q AID C V G + TI K VT+ +
Sbjct: 2 IYNIYDFGAKGDSLTDDTDSLQQAIDKCSFEGGGI-VLVDDGTFKVGTIYFKDDVTIEVG 60
Query: 74 EDATLLGGPRIEDYPEESSRWY----------VVLAENATDVGITGGGVVDGQAMKFVVT 123
++ Y +++ + A+ ++G+TG G +DG +F
Sbjct: 61 IRGKIIAQTERHFYKDDTHHQMYTRETHMDKCLFFAKECKNIGLTGRGEIDGCGSEF--- 117
Query: 124 KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
+ RP L +L C N+ + N++LR PA W + C+N ++
Sbjct: 118 -------------------KKFRPMLFRYLDCENIRITNIKLRNPASWTNAFIGCNNIWV 158
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--YTGPLYNLTATDSWI 241
+ I N N DG+D + N ++ + D DD IC + + N+ T+
Sbjct: 159 DGIDIKSRANN-NGDGLDFDGCENVFVSNCKFDCSDDCICLQNSYFDRVCKNIVVTNCIF 217
Query: 242 RTKSSAIKLGSAS 254
++ + +++G S
Sbjct: 218 SSRWAGMRIGLLS 230
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 105/259 (40%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGA+GDGI +T AI AI V P G ++T I LKS++ L+I D
Sbjct: 61 SIVRFGAQGDGISLNTQAINRAIAETSQKGGGV-VLIPAGVWVTGPIELKSNINLHIQRD 119
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTK-- 124
A LL + Y + W + N ++ ITG G++DG + + K
Sbjct: 120 AILLFTDDFDQYKLVEANWEGQPAWRNQSPISGSNLENIAITGTGIIDGNGGAWRMVKKS 179
Query: 125 -----------------NEIKNV----------MVSWNHTGACSG----------DECRP 147
NE KN+ + N + G D RP
Sbjct: 180 KMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRP 239
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ C+ + + V + W LH + C + +R++ + + N DGIDIE N
Sbjct: 240 NLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKN 299
Query: 208 TVITRVQIDTGDDAICPKT 226
++ D GDD IC K+
Sbjct: 300 VLVENSTFDVGDDGICIKS 318
>gi|149243741|pdb|2UVE|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243742|pdb|2UVE|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243745|pdb|2UVF|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
gi|149243746|pdb|2UVF|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
Length = 608
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 124/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|345512535|ref|ZP_08792061.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|345456384|gb|EEO45475.2| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 515
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L L LS H+ + ++DFGA D + T AI AI++C +V
Sbjct: 4 LYLCLSVIHVFAQTKEHGRTGEFNILDFGATRDTMMVHTKAINEAIESCYRQGGG-RVVI 62
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 63 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAVYRSLKDAGGWSALIYAVG 122
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 123 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 169
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 170 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 228
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K +V N +
Sbjct: 229 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIVISNCIV 277
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+ +DA LL I ++P + R+ ++ N TDV +TG G +DG
Sbjct: 113 YLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + N+ + N+ L W +H
Sbjct: 173 QGEFW-------------WQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N ++ ++I+ +PN DGI+ + N I I +GDD + K+
Sbjct: 220 VYSSNIIVQGITIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKS 270
>gi|3089553|gb|AAC15064.1| exopolygalacturonase [Yersinia enterocolitica]
Length = 601
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 124/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|238794289|ref|ZP_04637902.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
gi|238726373|gb|EEQ17914.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
Length = 608
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 129/309 (41%), Gaps = 58/309 (18%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
L+ ++ I +V DFGA DG +T AIQ AID+C PG C+V P G + + +
Sbjct: 145 LVTAKTSAKPQIVNVRDFGAVNDGNTLNTKAIQQAIDSCKPG---CRVEIPAGIFKSGAL 201
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------V 105
LKS +TLN+ ATLLG +DYP + E NA D +
Sbjct: 202 WLKSDMTLNLQAGATLLGSENPDDYPAGYLLYPYSTIERPASLINAIDPHKSAPGTFRNI 261
Query: 106 GITGGGVVDGQA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD--- 143
ITG GV+DG ++V +KN ++ +++ N D
Sbjct: 262 RITGSGVIDGNGWQRAKTAEITDELGHPLPQYVASKNSKVHEDGILAKNQVEKAVADGMD 321
Query: 144 ------ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNN 197
+ R L+ G NV + +R PA+ + + N + I+ ++ N
Sbjct: 322 LKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNG 380
Query: 198 DGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKL 250
DGI+ +S N ++ DTGDD I TG P+ +++ R AI
Sbjct: 381 DGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQQQEPMKGAWLFNNYFRMGHGAIVT 440
Query: 251 GS--ASWFD 257
GS +W +
Sbjct: 441 GSHTGAWIE 449
>gi|420261144|ref|ZP_14763801.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511433|gb|EKA25311.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 608
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 124/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 39 HSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVV--LAENATDVGITGG---GVVDGQAMKFVVTKN 125
+ A +LG ++ S W V+ L + + GG +++G ++ VV
Sbjct: 99 FLERGAVILGS-------QDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITG 151
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDN 180
+ + V W+ + S + RP LV FL NV V N+ L PAY +H V C N
Sbjct: 152 DNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAY-NIHPVYCSN 210
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++++S+Y +P GI + S++T I I G DAI K+
Sbjct: 211 VRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKS 256
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 120/272 (44%), Gaps = 26/272 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGA T AIQ AI PG+ V P G YLT I LKS +TL++ +
Sbjct: 5 SILTFGADPSAERISTTAIQQAIAKAKPGDS---VVIPAGRYLTGAIFLKSDITLHLVQG 61
Query: 76 ATLLGGPRIEDYPEESS-------RW--YVVLAENATDVGITGGGVVDGQAM---KFVVT 123
+ LLG +EDYP + RW ++ NA +V +TG G +DGQ +
Sbjct: 62 SVLLGSQHLEDYPLIDTRVAGIDMRWPAGIINVINAQNVSLTGTGTLDGQGRIWWQRFWG 121
Query: 124 KNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+E ++ ++ G D RPR V +N+ + + E +W +H+ +
Sbjct: 122 DDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFWNVHLCYSRD 181
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG---PLYNLTAT 237
+ ++SI P+ DGIDI+ I R + DD IC K G TA
Sbjct: 182 VAVENLSIINSAG-PSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGREAAPKARTAR 240
Query: 238 DSWIR----TKSSAIKLGSASWFDFKALVFDN 265
IR K S I LGS + + ++ +N
Sbjct: 241 AIVIRECVLNKGSGITLGSETSGGIEHVLIEN 272
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+GA+ G +T AI +AI+AC +V P G +LT I KS+V L + E+A
Sbjct: 54 ITDYGAQPGGEADNTKAIAAAIEACNQAGGG-RVVVPAGTWLTGPIHFKSNVNLCLEENA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 113 VLNFTDNPSDYLPTVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 172
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++RE +
Sbjct: 173 PQPHLEALKELYTKASTNIPVIE--RQMAIGENHLRPHLIHFNRCKNVLLDGFKIRESPF 230
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 231 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKA 284
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA + AI+ AIDA +V P GE+LT + LKS+V L++ + A
Sbjct: 56 ITDFGAVAGDKEKISGAIRQAIDAANQAGG-GKVVVPAGEWLTGKVHLKSNVNLHLDKGA 114
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK----FVV 122
LL + EDY P S W ++ A +V ITG G V + F
Sbjct: 115 VLLFSEKPEDYLPAVHSSWEGIECYNYSPLIYAYQCKNVAITGEGEVRAKMEVWKEWFAR 174
Query: 123 TKNEIKNVMVSWNHTGACSGDE----------CRPRLVGFLGCRNVNVWNVRLREPAYWC 172
K ++++ +N + E RP+ + F C NV + + +W
Sbjct: 175 PKPHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVLMEGFTVTNSPFWT 234
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+H C N I + +Y + NNDG+D E S N IT D GDDAI K+ P
Sbjct: 235 IHPYLCKNVVISRLKVYA--HGHNNDGVDPEMSQNVFITDCVFDQGDDAIAIKSGRNP 290
>gi|398850820|ref|ZP_10607516.1| endopolygalacturonase [Pseudomonas sp. GM80]
gi|398247934|gb|EJN33366.1| endopolygalacturonase [Pseudomonas sp. GM80]
Length = 605
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ V +GAKGDG DT AIQ+AIDAC PG C+V P G Y + + LKS++T+ I
Sbjct: 155 VFDVRKYGAKGDGKSLDTLAIQNAIDACTPG---CKVWLPKGTYKSGALYLKSNITVEIA 211
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLA------------------ENATDVGITGGGVVD- 114
E ATLLG R EDYP Y + ++ ++ I G G +D
Sbjct: 212 EGATLLGSERAEDYPLAGYIQYPYSSTVRPASLINALPRDPRQHQSFENIRIVGKGTIDG 271
Query: 115 -------------GQAMKF-------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
GQ + F ++ K +++ + + G + R
Sbjct: 272 NGWKRRADVVDERGQPLPFYLPSDNTRYQQDGILAKAQVEQAVARGMNVKDAYG-QMRSS 330
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PA+ + + +N + + + + ++ N DGI+ +S
Sbjct: 331 LITLRNVKNVFYGGFTVVNPAFHGIMNLETENVVLAN-TTHKTYDANNGDGIEFANSKGA 389
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG + D+WI
Sbjct: 390 MVFNNFFDTGDDCVNFAAGTGADAVQQKPQEDAWI 424
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDF A D T AIQ AID+ G+ V P G +LT + LKS +TL + +D
Sbjct: 5 NIIDFDAVPDATSLSTQAIQRAIDSAAEGDT---VLIPAGRFLTGALFLKSKMTLELAKD 61
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVLA--ENATDVGITGGGVVDGQAM----KFVV 122
A LLG ++EDYPE ++R W + +V + G G +DGQ KF
Sbjct: 62 AVLLGSQQLEDYPEIATRVAGIDMVWPTAMLNINQCRNVTVCGSGTLDGQGAVWWHKF-W 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ + G D RPR + V + + ++ +W LH+
Sbjct: 121 GDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNLHVCYSK 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNL---TA 236
++ +++ T + DGIDI+ S + + DD IC K+ G TA
Sbjct: 181 QVNLQRLNVMNATGT-STDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTA 239
Query: 237 TDSWIR----TKSSAIKLGSAS 254
D IR K S I LGS +
Sbjct: 240 RDIIIRDCTLLKGSGITLGSET 261
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++D+GA G +T AI AI AC +V P GE+LT + +S+V L++ E+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAIAACNKAGGG-RVVIPEGEWLTGPVHFQSNVNLHLEEN 111
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFV 121
A L DY P + W ++ A + ++ ITG G ++D + F
Sbjct: 112 AILRFTDNPSDYLPAVMTSWEGMECYNYSPLLYAMDCENIAITGKGTLAPIMDTWKIWFK 171
Query: 122 VTKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
K + + + A + RP L+ F C+NV + ++R+ +W
Sbjct: 172 RPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFW 231
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ CD +R++ + + NNDGID+E S N +I D GDDA+ K
Sbjct: 232 TIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIKA 284
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 105/259 (40%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFGA G+G+ T A + AI+ + P G +LT I LKS++ L+I +
Sbjct: 50 SLPDFGAVGNGVELCTEAFEKAIETLS-SRGGGHLIVPAGIWLTGPIVLKSNIDLHIEKG 108
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L P +E YP + + V N T+V ITG G +DG + K E
Sbjct: 109 AVVLFSPDVELYPLVETVFEGLDTRRCQSPVSGRNLTNVAITGQGAIDGNGHFWRPLKRE 168
Query: 127 IKNVMVSWNHTGACSG--------------------------------DE-------CRP 147
K W T A G +E RP
Sbjct: 169 -KVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEWQSVRHFLRP 227
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V + C+NV + V + W LH + C+N I ++ + N DG+D+E N
Sbjct: 228 VMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKN 287
Query: 208 TVITRVQIDTGDDAICPKT 226
+I D GDD IC K+
Sbjct: 288 ALIVNSTFDVGDDGICLKS 306
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFGAKGDG+ +T A + AI+ C +V P G +LT I LKS+V L++ +
Sbjct: 56 YNIADFGAKGDGVTKNTEAFRLAIEKCH-AEGGGRVVVPHGVFLTGAIYLKSNVNLHLTD 114
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
T+L DYP +RW + A ++ ITG G +DG
Sbjct: 115 GTTILFSRDSSDYPIVFTRWEGMECMNYSSFIYAYGEENIAITGKGTLDGNSDNDNWWWW 174
Query: 117 --AMKF----------VVTKNEIKNVM---VSWNHTGACSGDECRPRLVGFLGCRNVNVW 161
A K+ + + +M V G RP V C+N+ +
Sbjct: 175 CGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYNCKNILIE 234
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
++++ W L+ V C+N I + + + PNNDG D E N +I DTGDD
Sbjct: 235 DIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCYFDTGDDC 292
Query: 222 ICPKT 226
I K+
Sbjct: 293 IAIKS 297
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GA DG T AI SAI AC +V P G YLT + L S+V L++ E+A L
Sbjct: 58 YGAVADGQSLSTGAINSAIIACHKAGG-GRVLVPAGHYLTGAVHLLSNVELHLAENARLS 116
Query: 80 GGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF--------- 120
DY P +RW ++ A A ++GITG GV+DG A +
Sbjct: 117 FSRDPNDYLPAVFTRWEGVEYMGYSPLIYAYQAENIGITGTGVLDGSASEMHWWPWKGTS 176
Query: 121 ------VVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLRE 167
+++ + + + G G RP + CRNV + +V +
Sbjct: 177 EWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIIN 236
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H V CDN R + + PN+DG + E N +I DTGDD I K+
Sbjct: 237 APFWLVHPVLCDNVTARRLHLQS--LGPNSDGCNPESCRNVLIEHCFFDTGDDCIAIKS 293
>gi|146301964|ref|YP_001196555.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156382|gb|ABQ07236.1| Candidate beta glycuronase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 442
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFG D T AIQ ID N + P G +L+ + K L + E
Sbjct: 53 YTITDFGVSKDSTKIQTTAIQKVIDKAS-ANGGGVIVIPKGVFLSGALFFKPKTALYVSE 111
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKN 125
L G I D+P SR +V A N + I+G G ++G K+
Sbjct: 112 GGVLKGSDNIADFPIMPSRMEGQNLDYFPALVNAYNVDNFSISGKGTINGNGKKYWEAFW 171
Query: 126 EIKNVMVSWNHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
E + C+ E RPRLV NV +V+L +W H +C+N +
Sbjct: 172 ERRK------ENPKCTNLEVSRPRLVFVWNSNNVQFQDVKLINSGFWTNHFYKCNNVKLL 225
Query: 185 DMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
D+ I+ + P+ D IDI+ NN ++ + DDAI K GP
Sbjct: 226 DLYIFSPHIEIKAPSTDAIDIDICNNFLVKGCYMSVNDDAIALKGGKGP 274
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 120/283 (42%), Gaps = 42/283 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFGA GDG+ +T A + AI K Q+ PPG +LTA L S++TL
Sbjct: 65 VFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLF 124
Query: 72 IHEDATLLGGPRIEDY----PEESSRWY-----------VVLAENATDVGITG-GGVVDG 115
+ E+A +L + E Y P S Y + +N DV +TG G ++G
Sbjct: 125 LSENAEIL-ALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSING 183
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + R LV + ++ N+ LR+ +W LH
Sbjct: 184 QGQTW-------------WKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHP 230
Query: 176 VRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
C N I +M+I F PN DGID + + +I I GDD I K T
Sbjct: 231 YDCKNVTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTT 290
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + IR+ SA I +GS + +NI I
Sbjct: 291 YGKPSKNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILI 333
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A + AI P + PPG YLT L SH+TL +
Sbjct: 44 SITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLTSHMTLYLA 103
Query: 74 EDATL------LGGPRIEDYPE--------ESSRWYVVLAENATDVGITG-GGVVDGQAM 118
A + L P I P + + DV ITG G +DGQ
Sbjct: 104 AGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGENGTIDGQGD 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ WN + RP LV F+ R++ + NV + +W +H V C
Sbjct: 164 AW-------------WNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N +R ++I ++PN DGID + S+N I I TGDD + K+
Sbjct: 211 SNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 258
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 37 HSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTL 96
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVV--LAENATDVGITGG---GVVDGQAMKFVVTKN 125
+ A +LG ++ S W V+ L + + GG +++G ++ VV
Sbjct: 97 FLERGAVILGS-------QDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITG 149
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDN 180
+ + V W+ + S + RP LV FL NV V N+ L PAY +H V C N
Sbjct: 150 DNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAY-NIHPVYCSN 208
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++++S+Y +P GI + S++T I I G DAI K+
Sbjct: 209 VRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKS 254
>gi|237712560|ref|ZP_04543041.1| polygalacturonase [Bacteroides sp. 9_1_42FAA]
gi|229453881|gb|EEO59602.1| polygalacturonase [Bacteroides sp. 9_1_42FAA]
Length = 548
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L + LS H+ + ++DFGA D + T AI AI++C +V
Sbjct: 37 LYICLSVIHVFAQTREHGRTGEFNILDFGATRDTMMVHTKAINEAIESCYRQGGG-RVVI 95
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 96 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAAYRSLKDAGGWSALIYAVG 155
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 156 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 202
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 203 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 261
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K +V N +
Sbjct: 262 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIVISNCIV 310
>gi|398868856|ref|ZP_10624247.1| endopolygalacturonase [Pseudomonas sp. GM78]
gi|398232390|gb|EJN18358.1| endopolygalacturonase [Pseudomonas sp. GM78]
Length = 607
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 111/275 (40%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ V + GAKGDG DTAAIQ AIDAC PG C+V P G Y + + LKS++TL I
Sbjct: 155 LFDVREQGAKGDGSTLDTAAIQRAIDACTPG---CKVLLPAGTYKSGALYLKSNMTLEIA 211
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLA------------------ENATDVGITGGGVVDG 115
E ATLLG R EDYP + Y + ++ I G G +DG
Sbjct: 212 EGATLLGSERAEDYPRDGYVQYPYSTTVRPASLINALPRDPRKHQAFENIRIVGKGTLDG 271
Query: 116 QAMKF---------------------------VVTKNEIKNVMVSWNHTGACSGDECRPR 148
K V+ K +++ + + G + R
Sbjct: 272 NGWKRQADAIDERGQPLPVYVPSDNTRYMHDGVLAKAQVERAVAEGMNVKDAYG-QMRSS 330
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ NV + PAY + + N + +++ + F+ N DG++ +S
Sbjct: 331 LITLRDVTNVFYGGFTVLNPAYHGIMNLENHNVVLANIT-HKTFDANNGDGVEFANSRGA 389
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG D+WI
Sbjct: 390 MVFNNFFDTGDDCVNFAAGTGAEATQQKPQEDAWI 424
>gi|212693803|ref|ZP_03301931.1| hypothetical protein BACDOR_03324 [Bacteroides dorei DSM 17855]
gi|237709331|ref|ZP_04539812.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755006|ref|ZP_06089920.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513257|ref|ZP_08792779.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423232694|ref|ZP_17219094.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|423242177|ref|ZP_17223287.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
gi|423247386|ref|ZP_17228436.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|212663692|gb|EEB24266.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229437124|gb|EEO47201.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229456716|gb|EEO62437.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234617|gb|EEZ20196.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392623133|gb|EIY17238.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|392632526|gb|EIY26485.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|392639921|gb|EIY33729.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQSAIDA N + P G YL+ + K L++ E A
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ-NGGGVIVIPKGTYLSGALFFKPKTHLHLEEGA 107
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +S +++ L A+ ++G G +DG +++
Sbjct: 108 VLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY------W 161
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRLV NV + VRL +W H+ +C++ I ++
Sbjct: 162 KSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKILNL 221
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 222 YIFSPERPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGGKGP 268
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 51/276 (18%)
Query: 1 VQLLLLLSTTHIHIHS--VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
Q L ++ T S + +GA DG +T AI +AIDAC V P G +
Sbjct: 22 AQKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAIDACNK-KGGGVVVVPAGLWA 80
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITG 109
T I LKS+V L++ + A L Y W V A NAT++ ITG
Sbjct: 81 TGPITLKSNVNLHLKKGAVLQFTKDFNQYQLVEGNWEGIPQMRNQSPVSATNATNIAITG 140
Query: 110 GGVVDG------QAMKFVVTKNEIKNVMV----------SW------------NHTGACS 141
GV+DG Q K +T+++ K + SW + G +
Sbjct: 141 FGVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPSEQWLKAAKMKNPGEFT 200
Query: 142 GDE-----------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
D+ RP L+ C+ V + V + A WCLH + ++ +R++++
Sbjct: 201 PDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKN 260
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N DGID+E N +I D GDD +C K+
Sbjct: 261 PWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKS 296
>gi|123440561|ref|YP_001004555.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087522|emb|CAL10303.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 608
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 123/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPNDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
SV DFG GDG +T A ++A+ + + PPG YLT + L SH+TL +
Sbjct: 74 SVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNLTSHMTLYLA 133
Query: 74 EDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQAM 118
A + + ++P E Y+ + + +DV ITG G +DGQ
Sbjct: 134 AGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGD 193
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP LV F+ +++ + NV + +W +H V C
Sbjct: 194 -------------VWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYC 240
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
N +R ++I ++PN DGID + S+N I I TGDD + K+ Y P
Sbjct: 241 SNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRP 300
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
Y +T + + I +GS + + ++ ++I +
Sbjct: 301 SYGITIRRLTGSSPFAGIAIGSETSGGVENVLAEHINL 338
>gi|423239913|ref|ZP_17221028.1| hypothetical protein HMPREF1065_01651 [Bacteroides dorei
CL03T12C01]
gi|392644902|gb|EIY38636.1| hypothetical protein HMPREF1065_01651 [Bacteroides dorei
CL03T12C01]
Length = 515
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L + LS H+ + ++DFGA D + T AI AI++C +V
Sbjct: 4 LYICLSVIHVFAQTREHGRTGEFNILDFGATRDTMMVHTKAINEAIESCYRQGGG-RVVI 62
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 63 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAAYRSLKDAGGWSALIYAVG 122
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 123 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 169
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 170 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 228
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K +V N +
Sbjct: 229 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIVISNCIV 277
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ +FG GDG +T A Q+AI + Q+ P G++LT + L SH TL
Sbjct: 46 HSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHFTL 105
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITG-GGVVDG 115
+H+D+ LL + ++P + R+ ++ N TDV +TG G +DG
Sbjct: 106 YLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGTIDG 165
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 166 QGEFW-------------WQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHP 212
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N ++ ++I ++PN DGI+ + NT I I +GDD + K+
Sbjct: 213 VYSSNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 263
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 114/292 (39%), Gaps = 46/292 (15%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF--PPGEYLTATIRLKSHVTLNIHEDA 76
DFGA GDG +T A AI A NK R P G +LT I LK ++ L++ +A
Sbjct: 52 DFGATGDGTAMNTEAFSKAISAL---NKQGGGRLVVPAGIWLTGLISLKDNIDLHLERNA 108
Query: 77 TLLGGPR------IEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNV 130
++ P ++D ++ + A +V ITG G++DG + K K
Sbjct: 109 VIVFSPDKRDLIPVKDGKPDAKAAPCIRASKRKNVSITGEGIIDGNGEYWRPVKRG-KVS 167
Query: 131 MVSWNHTGACSG---------------------------DECRPRLVGFLGCRNVNVWNV 163
WN A G ++ R LV F C+NV V V
Sbjct: 168 DTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHLVRFTDCQNVLVQGV 227
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC 223
LR + L RC N I ++ + +N N D IDI + N +I ID GDD IC
Sbjct: 228 TLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVLIVNNTIDAGDDGIC 287
Query: 224 PK-------TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
K GP N+ D+ + +GS K + N T
Sbjct: 288 MKGGVGQKGVKDGPCENINIQDNIVYHAHGGFVIGSEFCGGMKNIFVHNNTF 339
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 19 DFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
DFG GDG +T A + A I + Q+ PPG +LTA L SH+TL + ED
Sbjct: 91 DFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLAED 150
Query: 76 ATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDGQA 117
+ +LG +ED P S Y ++ +N D+ ITG G ++GQ
Sbjct: 151 SEILG---VEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQG 207
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ W + R LV + ++ + N+ +R+ +W LH
Sbjct: 208 QSW-------------WKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYD 254
Query: 178 CDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YT 228
C N IR+++I PN DGID + + VI I TGDDAI K+ Y
Sbjct: 255 CKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYG 314
Query: 229 GPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA + +GS + +N+ I
Sbjct: 315 RPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLI 355
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ D GAK TA IQ ID +R P G++ T I LKSHV L++ E
Sbjct: 73 NIADLGAKAGA--QVTAIIQQGIDELS-ATGGGTLRIPKGKWKTGRIALKSHVNLHLEEG 129
Query: 76 ATLLGGPRIEDY----------PEESSRWYVVLAENATDVGITGGGVV----DGQAMKFV 121
A L I+DY E S + A N ++ ITG G + +G K +
Sbjct: 130 AELYFSGEIKDYLPVVFTRNEGMEVMSLGACIYANNQENIAITGKGRLIGPAEGSVRKQI 189
Query: 122 VTKNEIKNVM-----VSWNHTGACSGDECRPRL-VGFLGCRNVNVWNVRLREPAYWCLHI 175
+T + I+NV+ V+ G P + + + CR+V + VRL A+W +
Sbjct: 190 MTHDVIENVVPHDKPVAERIYDGKDGSFIFPAMFIAPINCRDVLIEGVRLERTAFWNIVP 249
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
CD IR ++I+ P DGID+E S N +I + TGDD + K G
Sbjct: 250 QYCDRVIIRGVTIH-SIGIPRGDGIDVESSKNVLIEYCTLQTGDDCLAMKAGRG 302
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 20/228 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GAKGDG +T IQ AID C V F PGEYLT ++ +K V L I
Sbjct: 46 MFNVAKYGAKGDGKTLNTNTIQKAIDDCAKKGGGIVV-FNPGEYLTGSVFVKKGVNLRID 104
Query: 74 EDATLLGGPRIEDYPEESSR-------WYVVLAE--NATDVGITGGGVVDGQAMKF---- 120
+ T+LG I+DY +R W L + D I+G G+++ Q F
Sbjct: 105 KGVTILGSQDIKDYKVIDTRVAGIEMEWPAALINVLDQEDAMISGKGLINAQGKVFWDYY 164
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ E + + W D RPR + +NV + ++ +++ +W + +V
Sbjct: 165 WNLRKEYEPKGLRW----IIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYSSY 220
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ ++I + + P+ DG+DI+ S+ ++ ID DD C K
Sbjct: 221 VTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKA 268
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 119/298 (39%), Gaps = 52/298 (17%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V FGA+GDG ++ AI AI AC +V P G +LT + L+S+V L++ A
Sbjct: 48 VTRFGARGDGQTLNSTAIARAIAACAAAGG-GRVVVPAGRFLTGAVHLRSNVNLHLQAGA 106
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA---------- 117
TLL +DYP +RW +V A ++ ITG G +DGQ
Sbjct: 107 TLLFSTDPKDYPLVFTRWEGIELMNYSPLVYARQQRNIAITGEGTLDGQGSARHWWSWKG 166
Query: 118 -----------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
K E+ V G RP V C NV +
Sbjct: 167 PWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRPAFVQPYDCENVLI 226
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
V+LR +W +H V C N +R + + G + PNNDG D E + +I R DTGDD
Sbjct: 227 EGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDGALIERCTFDTGDD 284
Query: 221 AIC--------PKTYTGPLYNLTATDSWIRTKSSAIKLGS-----ASWFDFKALVFDN 265
I + P N+ D ++ + +GS A W + V D+
Sbjct: 285 CIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHGGVVVGSQISGGARWIFAERCVMDS 342
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++I FGAK DG+ +T AI AI C V P G +LT I LKS+V L++ +
Sbjct: 47 NIIAFGAKPDGVSLNTQAINKAISTCSQKGGGV-VLVPAGIWLTGPIVLKSNVNLHLKKA 105
Query: 76 ATLLGGPRIEDY---------PEESSRWYVVLAENATDVGITGGGVVDGQ---------- 116
ATLL Y + V N +V ITG G++DG
Sbjct: 106 ATLLFTTDKNQYALVEGVYEGKRAARNQSPVSGTNLANVAITGQGILDGNGDVWRAVHKS 165
Query: 117 --------------------------AMKFVVTKNEIKNVMVSWNHTG---ACSGDECRP 147
+ +F E ++++++ T A D RP
Sbjct: 166 QLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGKTPQDFADMKDFLRP 225
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
LV C+ V + V + WCLH + C + +R+++ N DG+DIE N
Sbjct: 226 NLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIESCKN 285
Query: 208 TVITRVQIDTGDDAICPKT 226
+I +D GDDAIC K+
Sbjct: 286 FLIEGCTLDVGDDAICIKS 304
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T Q+AI Q+ P G +LT + L SH+T+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ +DA ++G + ++P + ++ N TDV ITG G++DG
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + + WN + + RP LV F+ ++ + N+ L W +H
Sbjct: 161 QGLTW-------------WNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHP 207
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + D++I + P DGI + +N I I DAI K+
Sbjct: 208 VFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKS 258
>gi|354595733|ref|ZP_09013750.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
gi|353673668|gb|EHD19701.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
Length = 605
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 108/257 (42%), Gaps = 51/257 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
+FGAK DG +TAAIQ AIDAC PG C+V P G Y T + LKS +TLN+ + A L
Sbjct: 157 EFGAKADGNTLNTAAIQQAIDACKPG---CRVDVPRGIYKTGALWLKSDMTLNLQDGAVL 213
Query: 79 LGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDGQAMKFV 121
LG DYP + E NA D + I G G++DG +
Sbjct: 214 LGSDNPADYPAGYRLYPYSTTERPASLINAIDAESSHPGTFRNIRIVGKGMIDGNGWR-R 272
Query: 122 VTKNEIKN---------------------VMVSWNHTGACSG--------DECRPRLVGF 152
K EIK+ V+ A +G + R L+
Sbjct: 273 TAKGEIKDELGGTLPQYVASKNSKVHEDGVLAKHQVEQAVAGGMDLKTAYGQRRSSLITL 332
Query: 153 LGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITR 212
G NV + + +R PA+ + + N + I+ ++ N DGI+ +S N ++
Sbjct: 333 RGVENVYLADFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSKNVMVFN 391
Query: 213 VQIDTGDDAICPKTYTG 229
DTGDD I TG
Sbjct: 392 NFFDTGDDCINFAAGTG 408
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 55/274 (20%)
Query: 6 LLSTTHIHIH----SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT 61
L S +H+ S++ FGA+GDGI +T +I AI V P G ++T
Sbjct: 54 LPSIKQVHVKADTISIVRFGAQGDGISLNTQSINRAIAETSQKGGGV-VLIPAGVWVTGP 112
Query: 62 IRLKSHVTLNIHEDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGV 112
I LKS++ L+I DA LL + Y + W + N ++ ITG G+
Sbjct: 113 IELKSNINLHIQRDAILLFTDDFDQYKLVEANWEGQPAWRNQSPISGSNLENIAITGTGI 172
Query: 113 VDGQAMKFVVTKNEIKNVMVSWN---HTGACSGDE------------------------- 144
+DG + + K K W +G DE
Sbjct: 173 IDGNGGAWRMVKKS-KMTASQWKKLIESGGVLNDEKNIWYPSASSLNGSKTKNPSAVVPG 231
Query: 145 ------------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
RP L+ C+ + + V + W LH + C + +R++ + +
Sbjct: 232 KTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPW 291
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N DGIDIE N ++ D GDD IC K+
Sbjct: 292 YAQNGDGIDIESCKNVLVENSTFDVGDDGICIKS 325
>gi|424890185|ref|ZP_18313784.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172403|gb|EJC72448.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 454
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
+T +Q+AID+ ++ G ++ +RL+S V L++ A L P Y
Sbjct: 16 NTDRLQAAIDSLSASGGG-RLELMAGIHICRGLRLRSGVDLHLAAGAILRPVPDYAAYAR 74
Query: 90 -------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSG 142
E S +++A A + +TG G ++ F+ +E +
Sbjct: 75 TTVSVIAEKSDRGMIVASGARRISLTGEGRIEASCESFITGDDETVGTFIPA-------- 126
Query: 143 DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDI 202
E RPR+V F C V + ++ + W LH V C N +R+++I D PN DGI +
Sbjct: 127 -EFRPRVVVFEHCDEVEIGSLTISGSPMWTLHFVDCTNVAVRNVTIENDRRLPNTDGIVL 185
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASW 255
+ I I T DD IC KT GP N+ +++ S A+K+G+ +
Sbjct: 186 DACRGAFIEDCTISTADDGICLKTSIGPEGVAIGRCENILVRRCSVQSLSCALKIGTETH 245
Query: 256 FDFKALVFDNITI 268
D ++F++ ++
Sbjct: 246 GDITNVLFEDCSV 258
>gi|294776867|ref|ZP_06742330.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449343|gb|EFG17880.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 434
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQSAIDA N + P G YL+ + K L++ E A
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ-NGGGVIVIPKGTYLSGALFFKPQTHLHLEEGA 107
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +S +++ L A+ ++G G +DG +++
Sbjct: 108 VLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY------W 161
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRLV NV + VRL +W H+ +C++ + ++
Sbjct: 162 KSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNL 221
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 222 YIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGGKGP 268
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGAKGDGI +T AI AI A +V P G +LT I L S+V L +
Sbjct: 59 NIVDFGAKGDGIVLNTKAINDAIKAVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEMN 117
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITG----------------- 109
A +L E YP + + + A NA ++ ITG
Sbjct: 118 ALVLFTDDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIAITGHGVFDGSGDSWRPVKKG 177
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMVS--WNHTGACSGDE--------CR 146
GGVVD + T +K M + +N+ + DE R
Sbjct: 178 KLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGINTDEEWNEIRPWLR 237
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ + + V + V + WCLH + C++ I ++ ++ + + N D +D+E
Sbjct: 238 PVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCK 297
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 298 NALIVNNIFDAGDDAICIKS 317
>gi|229589775|ref|YP_002871894.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas fluorescens SBW25]
gi|229361641|emb|CAY48521.1| exo-poly-alpha-D-galacturonosidase precursor [Pseudomonas
fluorescens SBW25]
Length = 600
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 52/275 (18%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ V +GAKGDGIH DT AIQ AIDAC G K V P G Y + + LKS++TL I
Sbjct: 150 VFDVKHYGAKGDGIHLDTLAIQRAIDACTVGGK---VLLPKGTYKSGALYLKSNMTLEIA 206
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLA------------------ENATDVGITGGGVVD- 114
+ ATLLG R EDYP Y + + ++ I G G +D
Sbjct: 207 DGATLLGSERAEDYPLAGYIQYPYSSTVRPASLINALPRDPRQHQTFENIRIVGKGTLDG 266
Query: 115 -------------GQAMKFVV-------------TKNEIKNVMVSWNHTGACSGDECRPR 148
GQ + F V K +++ + + G + R
Sbjct: 267 NGWKRNADVRDERGQTLPFYVPSDNTRYLQDGLLAKAQVEQAVARGMNVKDAYG-QMRSS 325
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ +NV + PA+ + + +N + + + + ++ N DGI+ +S
Sbjct: 326 LITLRNVKNVFYGGFTVLNPAFHGIMNLETENVVLAN-TTHTTYDANNGDGIEFANSKGA 384
Query: 209 VITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
++ DTGDD + TG ++ D+WI
Sbjct: 385 MVFNNFFDTGDDCVNFAAGTGADAVHQRPQEDAWI 419
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ D+GA GDG +T A ++AI C V P G +LT I L+S V L++ E
Sbjct: 63 TITDYGAVGDGQTMNTEAFRAAIADCHRAGG-GHVLVPEGRFLTGAIHLRSGVDLHVTEG 121
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM------- 118
AT+ P D+ P +RW + A +V +TG G +DGQA
Sbjct: 122 ATIAFSPDPRDFLPVVFTRWEGTECYNYSPFIYAYGERNVAVTGPGTLDGQARLGPWESW 181
Query: 119 ----------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
+ ++ + V V+ G G RP++V F CRNV V + + +P
Sbjct: 182 YRTSGPQGPDQSLLRRMGSAGVPVAERVFG--DGHYLRPKMVQFYRCRNVLVSGLTIVDP 239
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V N +RD+++ D N DG D E ++ +IT + +T DD + K+
Sbjct: 240 PMWTVHPVLSTNVTVRDITV--DSTLYNTDGCDPECCSDVLITGCRFNTNDDCVAVKS 295
>gi|424917510|ref|ZP_18340874.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392853686|gb|EJB06207.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 454
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY--------PEESSRWYVVLAE 100
++ G ++ +RL+S V L++ A L P Y E+S R +V A+
Sbjct: 34 RLELLAGIHICRGLRLRSGVDLHLAAGAVLRPVPDYAAYVHTTVSVIAEKSDRGMIV-AK 92
Query: 101 NATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
A + +TG G ++ F++ +E + E RPR+V F C V +
Sbjct: 93 GARRIALTGPGRIEAGCESFIIGDDETVGTFIPA---------EFRPRVVVFESCDEVEI 143
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ + W LH V C + +R+++I D PN DGI ++ VI I T DD
Sbjct: 144 SALHISRSPMWTLHFVDCTDVAVRNVTIENDRRLPNTDGIVLDACLGAVIEDCTISTADD 203
Query: 221 AICPKTYTGP-------LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
IC KT GP N+ +++ S A+K+G+ + D +VF++ ++
Sbjct: 204 GICLKTSIGPQGVAIGRCENIVIRRCSVQSLSCALKIGTETHGDVTNVVFEDCSV 258
>gi|238798891|ref|ZP_04642357.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
gi|238717245|gb|EEQ09095.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
Length = 604
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 123/300 (41%), Gaps = 60/300 (20%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TL++
Sbjct: 151 QIVNVRDFGAIADGKTLNTQAIQQAIDSCKPG---CRVEIPSGTYKSGALWLKSDMTLHL 207
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
ATLLG +DYP + E NA D + ITG G++DG
Sbjct: 208 QAGATLLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGIIDG 267
Query: 116 QAMKF-----------------------------VVTKNEIKNVMVSWNHTGACSGDECR 146
+ ++ KN+++ + + G + R
Sbjct: 268 NGWQRAKTAEITDELGRPLPQYVASKNSKVHEDGILAKNQVEKAVSAGMDLKNAYG-QRR 326
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S
Sbjct: 327 SSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQ 385
Query: 207 NTVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
N ++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 386 NVMVFNNFFDTGDDCINFAAGTGEKAQQQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 445
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A QSAI + Q+ PPG++LT L SH TL
Sbjct: 50 HSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTL 109
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+H+DA +L ++P+ R+ ++ + TDV ITG G +DG
Sbjct: 110 FLHKDAVILASQVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDG 169
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + RP ++ + + + N+ L W +H
Sbjct: 170 QGSYW-------------WDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHP 216
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I+ ++I ++PN DGID + NT I I +GDD + K+
Sbjct: 217 IYSSNITIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKS 267
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 49/296 (16%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATI 62
L++ T ++ + GA GI T I I+ A G + FP G YLTATI
Sbjct: 11 LVIAVTAWSRTFNMKELGADPRGIESCTELINQTIEKASSEGGG--TIYFPAGVYLTATI 68
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGV 112
+KS++TL + A L R EDY P RW ++ A +A ++ ITG G
Sbjct: 69 HMKSNITLYVESGAVLRFSDRFEDYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITGRGT 128
Query: 113 VDGQAMKFVVTKNEIKNVM-------------------------VSWNHTGACSGDECRP 147
+DG K+ + E + ++ +S + + RP
Sbjct: 129 LDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRP 188
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG---DFNTPNNDGIDIED 204
+ F C NV + NVR+ +W ++ CDN + ++IY D PN DGI+
Sbjct: 189 PFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSS 248
Query: 205 SNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
N I+ I GDD I K+ Y N+T T+ + + + +GS
Sbjct: 249 CRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGS 304
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAK DGI +T AI AI +V P G +LT I L S+V L ++
Sbjct: 62 NIIDFGAKPDGITLNTKAINDAIQQVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN 120
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
A +L YP E + A NA ++ ITG GV DG K
Sbjct: 121 ALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD 180
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG------------------------DEC 145
+T+ + K ++ S + GA G D
Sbjct: 181 KLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL 240
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F+ C V + + WCLH + C+N I +++ + + N D +D+E
Sbjct: 241 RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC 300
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 301 NKALIINNSFDAGDDGICIKS 321
>gi|326799885|ref|YP_004317704.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550649|gb|ADZ79034.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 457
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + DFG D T AIQ ID N + P G +++ + K L + +
Sbjct: 68 YVITDFGVSADSTIVQTKAIQQVIDRAAE-NGGGVIIVPKGTFMSGALFFKPKTHLYVAD 126
Query: 75 DATLLGGPRIEDYPEESSRW------YVVLAENATDVG---ITGGGVVDGQAMKF--VVT 123
A L G I DYP+ SR Y NA V I+G GV+DG +++
Sbjct: 127 RAVLKGSDNIADYPKIPSRMEGQNLDYFAALINAYGVNGFTISGNGVIDGNGLRYWEAFW 186
Query: 124 KNEIKNVMVSWNHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
K +N C+ E RPRLV C +V V +V+LR +W H +C N
Sbjct: 187 KRREEN--------PKCTNLEVSRPRLVFIWKCNDVQVQDVKLRNAGFWSSHYYQCHNVK 238
Query: 183 IRDMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I ++ I + P+ D ID++ N ++ + DDAI K GP
Sbjct: 239 ILNVRITSPHAPVKAPSTDAIDLDVCTNVLVKGCYLSVNDDAIALKGGKGP 289
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GA+ H +T A AI+AC +V P GE+ T I LKSHV L + E A
Sbjct: 38 ITKYGARKGNNHLNTQAFAKAIEACNRAGG-GRVVVPAGEWFTGPIHLKSHVNLFLEEGA 96
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGG----VVDGQAMKFVV 122
+ DY P + W ++ A +VGI+G G V+D F
Sbjct: 97 VVRFSDNPNDYLPAVMTSWEGLECYNYSPLIYAFECENVGISGKGTLAPVMDTWRTWFKR 156
Query: 123 TKNEIKNVMVSWN----------HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ + + ++ A + RP L+ F C+N+ + + +R+ +W
Sbjct: 157 PEAHLNALRQLYSMGSTDVPVKQRQMAKGENHLRPHLIHFNRCKNILLEDFHIRQSPFWT 216
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ C++ +R + + + NNDGID+E S N +I + D GDDA+ K
Sbjct: 217 IHLYLCNSGVVRHLDVQA--HGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKA 268
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 38/260 (14%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
++ L++ T + + D+GA D T AI+ AI+AC N +V P G +L+
Sbjct: 41 IRKLIVAPTFKKVDYKITDYGASLDSTVKSTEAIRKAIEACHT-NGGGRVIVPKGTFLSG 99
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGG 110
I LKS+V L++ + A +L + DY P SRW ++ A ++ ITG
Sbjct: 100 PIHLKSNVNLHLEDGAKILFSRDVNDYKPLVFSRWEGMECMNYSPLIYAYEQENIAITGN 159
Query: 111 GVVDG------------------------QAMKFVVTKNEIKNVMVSWNHTGACSGDECR 146
G++DG Q + ++K+++ + G R
Sbjct: 160 GILDGNANNEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHG-DGSYLR 218
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P + +NV + +V++ +W ++ V C+N +R++ + + PNNDG D E
Sbjct: 219 PPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVV--THGPNNDGCDPESCK 276
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +IT DTGDD I K+
Sbjct: 277 NVLITGCYFDTGDDCIAIKS 296
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 46/268 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V FGAKGDG+ DT IQ+AI ACPP ++ V P G Y ++ LKS +++ + +
Sbjct: 84 NVRKFGAKGDGVSDDTTFIQAAIMACPPESR---VLIPAGTYKITSLFLKSGISVELAKG 140
Query: 76 ATLLGGPR----------IEDYPEES----SRWY---------VVLAENATDVGITGGGV 112
A LL IE Y E W ++ + +DV + G G
Sbjct: 141 AELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIISGIDVSDVNLYGEGS 200
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
++G A KNE VMV GA RPR++ CRN+ V + + W
Sbjct: 201 INGAASHENWWKNE--KVMV-----GAF-----RPRMLSLNRCRNIRVQGLYFHDSPAWV 248
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H D ++ + +PN DG+D E + I V+ GDD I K+
Sbjct: 249 IHPYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMG 308
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
Y P N+ + A+ +GS
Sbjct: 309 RRYKTPSSNIHVYQCLMEHGHGAVTVGS 336
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 19 DFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
DFG GDG +T A + A I + Q+ PPG +LTA L SH+TL + ED
Sbjct: 91 DFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLTSHMTLFLAED 150
Query: 76 ATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVVDGQA 117
+ +LG +ED P S Y ++ +N D+ ITG G ++GQ
Sbjct: 151 SEILG---VEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQG 207
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ W + R LV + ++ + N+ +R+ +W LH
Sbjct: 208 QSW-------------WKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYD 254
Query: 178 CDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YT 228
C N IR+++I PN DGID + + VI I TGDDAI K+ Y
Sbjct: 255 CKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYG 314
Query: 229 GPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + +R+ SA + +GS + +N+ I
Sbjct: 315 RPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLI 355
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 109/260 (41%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAKGDGI +T AI AI A +V P G +LT I L S+V L +
Sbjct: 59 NIIDFGAKGDGIVLNTKAINDAIKAVN-AKGGGKVVIPGGLWLTGPIELLSNVNLYTEMN 117
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITG----------------- 109
A +L E YP + + + A NA ++ ITG
Sbjct: 118 ALILFTDDFEAYPIIETSFEGLNTRRCQSPISAWNAENIAITGNGVFDGSGDSWRPVKKG 177
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMVS--WNHTGACSGDE--------CR 146
GGVVD + T +K M + +N+ DE R
Sbjct: 178 KLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIETDEEWNEIRPWLR 237
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ + + V + V + WCLH + C++ I ++ ++ + + N D +D+E
Sbjct: 238 PVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCK 297
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 298 NALIINNIFDAGDDAICIKS 317
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GN-KPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG+ +T + AI GN Q+ P G ++T + L S+ TL
Sbjct: 76 VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 135
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ E A +LG +ED+P ++ + +V ITG G +DGQ
Sbjct: 136 LEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQ 195
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R L+ N+ + N+ +W +H V
Sbjct: 196 GKMWW---------ELWWNRTL----EHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPV 242
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+D++I N PN DGID + S N I I++GDD + K+
Sbjct: 243 YCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 292
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A ++A+ + + PPG YLT + L SH+TL +
Sbjct: 42 SITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNLTSHMTLYLA 101
Query: 74 EDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQAM 118
A + + ++P E Y+ + + +DV ITG G +DGQ
Sbjct: 102 AGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENGTIDGQGD 161
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP LV F+ +++ + NV + +W +H V C
Sbjct: 162 -------------VWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYC 208
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
N +R ++I ++PN DGID + S+N I I TGDD + K+ Y P
Sbjct: 209 SNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRP 268
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
Y +T + + I +GS + + ++ ++I +
Sbjct: 269 SYGITIRRVTGSSPFAGIAIGSETSGGVENVLAEHINL 306
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA DG +T AI AI +V P G +LT I L+S+V L E+
Sbjct: 15 NIKDFGAVADGKTLNTEAINKAIQKVS-ARGGGKVIIPQGLWLTGPIELQSNVNLYTEEN 73
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
+ +L DYP E + A NA ++ ITG GV DG K
Sbjct: 74 SLILFSDNFNDYPIIETSFEGLETRRCQSPISAVNAENIAITGHGVFDGAGDSWRPVKKG 133
Query: 121 VVTKNEIKNVMVS--------WNHT-GACSGDEC-----------------------RPR 148
+T+++ K+++ S W T G+ G + RP
Sbjct: 134 KMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQWNEIRPWLRPV 193
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ C+NV + V + WCLH + C++ I + ++ + + N D +D+E N
Sbjct: 194 LLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNGDALDLESCTNA 253
Query: 209 VITRVQIDTGDDAICPKT 226
++ D GDDAIC K+
Sbjct: 254 LVINNVFDAGDDAICIKS 271
>gi|319644255|ref|ZP_07998768.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|423312681|ref|ZP_17290618.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
gi|317384246|gb|EFV65218.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392687415|gb|EIY80708.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQSAIDA N + P G YL+ + K L++ E A
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ-NGGGVIVIPKGTYLSGALFFKPKTHLHLEEGA 107
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +S +++ L A+ ++G G +DG +++
Sbjct: 108 VLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY------W 161
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRLV NV + VRL +W H+ +C++ + ++
Sbjct: 162 KSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNL 221
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 222 YIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGGKGP 268
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAK DGI +T AI AI +V P G +LT I L S+V L ++
Sbjct: 62 NIIDFGAKPDGITLNTKAINDAIQQVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN 120
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
A +L YP E + A NA ++ ITG GV DG K
Sbjct: 121 ALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD 180
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG------------------------DEC 145
+T+ + K ++ S + GA G D
Sbjct: 181 KLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL 240
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F+ C V + + WCLH + C+N I +++ + + N D +D+E
Sbjct: 241 RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC 300
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 301 NKALIINNSFDAGDDGICIKS 321
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GN-KPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG+ +T + AI GN Q+ P G ++T + L S+ TL
Sbjct: 76 VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 135
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ E A +LG +ED+P ++ + +V ITG G +DGQ
Sbjct: 136 LEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQ 195
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R L+ N+ + N+ +W +H V
Sbjct: 196 GKMWW---------ELWWNRTL----EHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPV 242
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+D++I N PN DGID + S N I I++GDD + K+
Sbjct: 243 YCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 292
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+++FGAKGDGI +T AI AI A +V P G +LT I L S+V L +
Sbjct: 59 SIVEFGAKGDGIMLNTKAINDAIKAVN-AKGGGKVVIPEGLWLTGPIELLSNVNLYTEMN 117
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITG----------------- 109
A +L E YP + + + A NA ++ ITG
Sbjct: 118 ALILFTDDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIAITGHGVFDGSGDSWRPVKKG 177
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMVS--WNHTGACSGDE--------CR 146
GGVVD + T +K M + +N+ DE R
Sbjct: 178 KLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIETDEEWNEIRPWLR 237
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ + + V + V + WCLH + C++ I ++ ++ + + N D +D+E
Sbjct: 238 PVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDLESCK 297
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 298 NALIINNIFDAGDDAICIKS 317
>gi|345519936|ref|ZP_08799343.1| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|345457031|gb|EET16505.2| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
Length = 389
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQSAIDA N + P G YL+ + K L++ E A
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ-NGGGVIVIPKGTYLSGALFFKPKTHLHLEEGA 107
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +S +++ L A+ ++G G +DG +++
Sbjct: 108 VLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY------W 161
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRLV NV + VRL +W H+ +C++ + ++
Sbjct: 162 KSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNL 221
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 222 YIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGGKGP 268
>gi|150004321|ref|YP_001299065.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932745|gb|ABR39443.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQSAIDA N + P G YL+ + K L++ E A
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ-NGGGVIVIPKGTYLSGALFFKPKTHLHLEEGA 107
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +S +++ L A+ ++G G +DG +++
Sbjct: 108 VLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY------W 161
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRLV NV + VRL +W H+ +C++ + ++
Sbjct: 162 KSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNL 221
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 222 YIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGGKGP 268
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAK DGI +T AI AI +V P G +LT I L S+V L ++
Sbjct: 62 NIIDFGAKPDGITLNTKAINDAIQQVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN 120
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
A +L YP E + A NA ++ ITG GV DG K
Sbjct: 121 ALVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD 180
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG------------------------DEC 145
+T+ + K ++ S + GA G D
Sbjct: 181 KLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL 240
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F+ C V + + WCLH + C+N I +++ + + N D +D+E
Sbjct: 241 RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC 300
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 301 NKALIINNSFDAGDDGICIKS 321
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T Q+AI Q+ P G +LT + L SH+T+
Sbjct: 8 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 67
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ +DA ++G + ++P + ++ N TDV ITG G++DG
Sbjct: 68 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 127
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + + WN + + RP LV F+ ++ + N+ L W +H
Sbjct: 128 QGLTW-------------WNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHP 174
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + D++I + P DGI + +N I I DAI K+
Sbjct: 175 VFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKS 225
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GN-KPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG+ +T + AI GN Q+ P G ++T + L S+ TL
Sbjct: 65 VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 124
Query: 72 IHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ E A +LG +ED+P ++ + +V ITG G +DGQ
Sbjct: 125 LEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQ 184
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R L+ N+ + N+ +W +H V
Sbjct: 185 GKMWW---------ELWWNRTL----EHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPV 231
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+D++I N PN DGID + S N I I++GDD + K+
Sbjct: 232 YCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 281
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GA DG +T AI AI AC +V P GE+LT I KS+V L++ E+A L
Sbjct: 60 YGAIADGKTNNTKAIARAIAACSRAGG-GRVVVPAGEWLTGPIHFKSNVNLHLSENAVLR 118
Query: 80 GGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVV---------------- 113
+DY P + W +V A + ++ ITG G +
Sbjct: 119 FTDNPDDYLPAVMTSWEGMECYNYSPLVYAFDCENIAITGTGTLQPIMDTWRKWFKRPQP 178
Query: 114 --DGQAMKFVVTKNEI----KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
D A + + ++ + + NH RP L+ F C+NV + ++RE
Sbjct: 179 HMDALAELYTMASTDVPVKERQMAKGENH--------LRPHLIHFNRCQNVLLDQFKIRE 230
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ CD +R++ + + NNDG+D+E S N ++ + D GDDA+ K
Sbjct: 231 SPFWTIHLYLCDGGIVRNLDVRA--HGHNNDGVDLEMSRNFLVENCKFDQGDDAVVIKA 287
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A + A+ + Q+ P G ++T + L S+ TL +
Sbjct: 2 SIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFLE 61
Query: 74 EDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITGG-GVVDGQAM 118
E A +LG P IE P ++ + +V ITG G +DGQ
Sbjct: 62 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGK 121
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + WN T + R LV + +++ + N+ R +W +H + C
Sbjct: 122 MWW---------ELWWNRTL----EHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYC 168
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N ++DM+I N PN DGID + S N I I++GDD + K+
Sbjct: 169 SNLVVKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 216
>gi|212693937|ref|ZP_03302065.1| hypothetical protein BACDOR_03461 [Bacteroides dorei DSM 17855]
gi|212663469|gb|EEB24043.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 453
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 29/271 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G + + T IQ ID N + P G Y + ++ K L + +
Sbjct: 62 YDLSDYGIESNPHIVQTQKIQKIIDEAA-ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSK 120
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
ATLLG I D+P E +++ L A+ I+G G +DG +
Sbjct: 121 GATLLGSENIMDFPLLMTRIEGEYCKYFGALINADGLDTFTISGKGTIDGNGTPYW---- 176
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + DE RPRL+ CRNV V +V L+ +W H RCD + +
Sbjct: 177 KAFRLRREWN-PQCTNKDEMRPRLLYIAHCRNVQVADVTLQNSPFWTSHYYRCDKVKLLN 235
Query: 186 MSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK----------TYTGPLY 232
+ I+ + + DGID++ N I + DDAIC K TY GP
Sbjct: 236 LRIFSPIKPIKSASADGIDMDVCTNFHIKGCRFTVNDDAICFKGGKGPYADQDTYNGPNK 295
Query: 233 NLTATDSWI-RTKSSAIKLGSASWFDFKALV 262
N+ D + T S + GS S + L+
Sbjct: 296 NILIEDCFFDHTTGSCMTCGSESIHVYNVLM 326
>gi|345516873|ref|ZP_08796358.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423228584|ref|ZP_17214990.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|423239702|ref|ZP_17220818.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
gi|423243850|ref|ZP_17224926.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|345455412|gb|EEO47835.2| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|392635892|gb|EIY29784.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|392643888|gb|EIY37635.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|392645742|gb|EIY39465.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
Length = 445
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 29/271 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G + + T IQ ID N + P G Y + ++ K L + +
Sbjct: 54 YDLSDYGIESNPHIVQTQKIQKIIDEAA-ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSK 112
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
ATLLG I D+P E +++ L A+ I+G G +DG +
Sbjct: 113 GATLLGSENIMDFPLLMTRIEGEYCKYFGALINADGLDTFTISGKGTIDGNGTPYW---- 168
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + DE RPRL+ CRNV V +V L+ +W H RCD + +
Sbjct: 169 KAFRLRREWN-PQCTNKDEMRPRLLYIAHCRNVQVADVTLQNSPFWTSHYYRCDKVKLLN 227
Query: 186 MSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK----------TYTGPLY 232
+ I+ + + DGID++ N I + DDAIC K TY GP
Sbjct: 228 LRIFSPIKPIKSASADGIDMDVCTNFHIKGCRFTVNDDAICFKGGKGPYADQDTYNGPNK 287
Query: 233 NLTATDSWI-RTKSSAIKLGSASWFDFKALV 262
N+ D + T S + GS S + L+
Sbjct: 288 NILIEDCFFDHTTGSCMTCGSESIHVYNVLM 318
>gi|418242061|ref|ZP_12868579.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|351778508|gb|EHB20659.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 608
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 123/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFG DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGVIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|50122473|ref|YP_051640.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49612999|emb|CAG76450.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 448
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 27/269 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
HS+ + DG+ DTA Q AID A G + PG YL + L S+ L +
Sbjct: 7 HSIQSYSPAADGVTPDTAIFQQAIDRIAAQGGGT---LTVEPGRYLLGGLLLPSNFCLQL 63
Query: 73 HEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L+ E + + E S + A ++ I G G + G A + +
Sbjct: 64 EAGAELIVSGDYEQFVQATTISMAELSHRAFLYAYQQRNITICGQGKIMGNADAYFSAEP 123
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + + + RPR+V F C +V + + + W +H+V C +
Sbjct: 124 DDQGYRLPAKY---------RPRIVVFEDCEHVRLCDFTIEHAPMWTVHLVSCRQIIVER 174
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDS 239
++I D + N D +D++ I+ + DDA+C KT P + + ++
Sbjct: 175 LTIDNDLSMANTDALDLDSCQQVQISNCSLSAADDALCIKTTHKPPHLQRKVQQVVISNC 234
Query: 240 WIRTKSSAIKLGSASWFDFKALVFDNITI 268
+R+KS A+K+G+ ++ D + + N I
Sbjct: 235 LLRSKSCALKIGTETFADIEDISVSNCAI 263
>gi|444355448|ref|YP_007391592.1| Polygalacturonase (EC 3.2.1.15) [Enterobacter aerogenes EA1509E]
gi|443906278|emb|CCG34052.1| Polygalacturonase (EC 3.2.1.15) [Enterobacter aerogenes EA1509E]
Length = 446
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 33/277 (11%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
+ LS H H DG+ DT Q A+D ++ G Y +R+
Sbjct: 3 IYLSQRHPH----------ADGVTPDTELFQQALDELAQAGGG-RLVVDCGRYALGGLRI 51
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQA 117
S+ L + A L+ +D+ + ESS + A +A ++ I GGG + G A
Sbjct: 52 GSNTCLWLSPGAELIVSENYDDFAQATALSRAESSDRAFLYAVDAQNITICGGGEIYGSA 111
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ + + G + RPR++ CR V + N+ +R W +H+V
Sbjct: 112 DGWFSRRVDA---------MGYRTPAAARPRIILLENCRRVRLENITVRHAPMWTIHLVS 162
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPL 231
C + +++ D N D +DI+ I DDA+C P+ PL
Sbjct: 163 CTGVVVDGVTVDNDLTMANTDALDIDSCQQVHIANSYFSAADDAVCLKTTDKPERIQRPL 222
Query: 232 YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+T + +R+KS A K+G+ +W D + ++ N TI
Sbjct: 223 RQVTIVNCTLRSKSCAFKIGTETWQDIEDVLVSNCTI 259
>gi|336246627|ref|YP_004590337.1| polygalacturonase family protein [Enterobacter aerogenes KCTC 2190]
gi|334732683|gb|AEG95058.1| polygalacturonase family protein [Enterobacter aerogenes KCTC 2190]
Length = 446
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 33/277 (11%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
+ LS H H DG+ DT Q A+D ++ G Y +R+
Sbjct: 3 IYLSQRHPH----------ADGVTPDTELFQQALDELAQAGGG-RLVVDCGRYALGGLRI 51
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQA 117
S+ L + A L+ +D+ + ESS + A +A ++ I GGG + G A
Sbjct: 52 GSNTCLWLSPGAELIVSENYDDFAQATALSRAESSDRAFLYAVDAQNITICGGGEIYGSA 111
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ + V T A + RPR++ CR V + N+ +R W +H+V
Sbjct: 112 DGWFS-----RGVDAMGYRTPAAA----RPRIILLENCRRVRLENITVRHAPMWTIHLVS 162
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC------PKTYTGPL 231
C + +++ D N D +DI+ I DDAIC P+ PL
Sbjct: 163 CAGVVVDGVTVDNDLTMANTDALDIDSCQQVHIANSYFSAADDAICLKTTDKPERIQRPL 222
Query: 232 YNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+T + +R+KS A K+G+ +W D + ++ N TI
Sbjct: 223 RQVTIVNCTLRSKSCAFKIGTETWQDIEDVLVSNCTI 259
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFGA GDG+ +T A + AI A Q+ P G +LTA L SH+TL
Sbjct: 74 VFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLF 133
Query: 72 IHEDATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVV 113
+ E A +LG I+D P S Y ++ +N DV ITG G +
Sbjct: 134 LDEGAVILG---IQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
GQ + W + R LV + R++ + N+ LR+ +W L
Sbjct: 191 SGQGKTW-------------WKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTL 237
Query: 174 HIVRCDNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
H C N IR+++I + PN DGID + + +I I GDD I K+
Sbjct: 238 HPYDCKNITIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYG 297
Query: 227 --YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + +++ SA I +GS + +N+ +
Sbjct: 298 IAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVV 342
>gi|265751211|ref|ZP_06087274.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263238107|gb|EEZ23557.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 435
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 29/271 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G + + T IQ ID N + P G Y + ++ K L + +
Sbjct: 44 YDLSDYGIESNPHIVQTQKIQKIIDEAA-ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSK 102
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
ATLLG I D+P E +++ L A+ I+G G +DG +
Sbjct: 103 GATLLGSENIMDFPLLMTRIEGEYCKYFGALINADGLDTFTISGKGTIDGNGTPYW---- 158
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + DE RPRL+ CRNV V +V L+ +W H RCD + +
Sbjct: 159 KAFRLRREWN-PQCTNKDEMRPRLLYIAHCRNVQVADVTLQNSPFWTSHYYRCDKVKLLN 217
Query: 186 MSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK----------TYTGPLY 232
+ I+ + + DGID++ N I + DDAIC K TY GP
Sbjct: 218 LRIFSPIKPIKSASADGIDMDVCTNFHIKGCRFTVNDDAICFKGGKGPYADQDTYNGPNK 277
Query: 233 NLTATDSWI-RTKSSAIKLGSASWFDFKALV 262
N+ D + T S + GS S + L+
Sbjct: 278 NILIEDCFFDHTTGSCMTCGSESIHVYNVLM 308
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 101/256 (39%), Gaps = 50/256 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA G+G+ T A AI+ + P G +LT I LKS++ L+I + A +
Sbjct: 53 DFGAVGNGVELCTDAFAKAIETLSARGGGYLI-VPAGIWLTGPIVLKSNINLHIEKGAVI 111
Query: 79 LGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L P +E YP + + + N T+V ITG G +DG + K E K
Sbjct: 112 LFSPDVELYPLVETVFEGLDTRRCQSPISGRNLTNVAITGQGAIDGNGHYWRPLKRE-KV 170
Query: 130 VMVSWNHTGACSG--------------------------------DE-------CRPRLV 150
W T A G +E RP +V
Sbjct: 171 TESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMV 230
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ C+NV V + W LH + C+N I D+ + N DG+D+E N +I
Sbjct: 231 SLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLDLESCKNALI 290
Query: 211 TRVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 291 VNSTFDVGDDGICLKS 306
>gi|386310805|ref|YP_006006861.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551770|ref|ZP_20507811.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
gi|318607670|emb|CBY29168.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|431787439|emb|CCO70851.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
Length = 623
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 123/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFG DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 170 QIVNVRDFGVIDDGKTLNTKAIQQAIDSCKPG---CRVEIPAGTYKSGALWLKSDMTLNL 226
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 227 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 286
Query: 116 QAM-----------------KFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 287 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 346
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 347 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 405
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 406 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 464
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 29/270 (10%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ ++++D+GA DG T AI +AI+A V P G Y T I LKS++ L+
Sbjct: 1 MQAYNIVDYGAPQDGTTPATEAIANAIEAASNAGGGTVV-IPSGTYFTGAIFLKSNIELH 59
Query: 72 IHEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF-V 121
+ A L DYP SRW + +N ++ +TG G+++G +
Sbjct: 60 VSPGAILSFSTNPADYPVVESRWEGVQREVHASCIYGQNLENISVTGSGILEGNGQPWWE 119
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+N +++ RP+L+ F C+ V + +V L+ W ++ + C N
Sbjct: 120 KHRNHPEDLQYP------------RPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNV 167
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------PLYNLT 235
I ++SI ++PN DGI+ E +N I+ ID GDD I K T N+T
Sbjct: 168 TIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIACENIT 227
Query: 236 ATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
T+ + + LGS D + + N
Sbjct: 228 ITNCTMVHGHGGVVLGSEMSGDIRNVTISN 257
>gi|251788461|ref|YP_003003182.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247537082|gb|ACT05703.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 444
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 23/262 (8%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+ DGI DTA Q AID V PG YL + L S+ L + A L+
Sbjct: 8 YHPAADGITPDTALFQQAIDELAAQGGGTLV-VEPGRYLLGGLHLPSNFCLQLDAGAELI 66
Query: 80 GGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
+D+ + E S + A ++ ++G G + G A + + + + +
Sbjct: 67 ASADYDDFAQNTTVSVAELSDRAFLYARQQRNITLSGQGKIIGNADAYFSAQPDEQGYRL 126
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
H RPR++ C V + V + W +H+V C + +++ D
Sbjct: 127 PARH---------RPRILVLEDCEQVKIQGVTIENAPMWTVHLVSCRQVNVERLTVDNDM 177
Query: 193 NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDSWIRTKSS 246
N D ++++ + + + DDA+C KT P +T + +R++S
Sbjct: 178 TMANTDALNLDSCQDVTVRDCHLSAADDALCIKTTAKPPAMQYKAQRMTVSHCRLRSRSC 237
Query: 247 AIKLGSASWFDFKALVFDNITI 268
A+K+G+ ++ D + L + I
Sbjct: 238 ALKIGTETFADIEDLTVSHCAI 259
>gi|242032587|ref|XP_002463688.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
gi|241917542|gb|EER90686.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
Length = 436
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 11 HIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFP-PGEYLTATIRL----K 65
H + S+ +GA+GDG H DT A++ A +A +P V P G YL + L K
Sbjct: 58 HQSVFSLDSYGARGDGRHDDTPALEKAWEAACASPRPAVVLVPNGGRYLLKLVTLRGPCK 117
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
S VTL + TL+ P D+ ++ R ++V + + GGG +DG K+
Sbjct: 118 SSVTLTV--KGTLVASPDRADWSDKDRRHWIVF-RRVNKLTVNGGGTIDGNGQKWWPHSC 174
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+I N T C + P + F C N+ V N+++ + + C + +
Sbjct: 175 KI-------NKTLPC---KVAPTALSFHHCTNLRVDNLKIMNGQQMHMSVEDCTDVVLAR 224
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+SI +PN DGI I S N +T +I TGDD +
Sbjct: 225 LSITAPARSPNTDGIHITRSKNVRVTNCKIKTGDDCM 261
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GAK G +T AI A+DAC +V P GE+LT + LKS+V L++ + A
Sbjct: 55 ITRYGAKEGGKVLNTKAIARAVDACHRAGGG-RVVVPAGEWLTGPVHLKSNVNLHLEKGA 113
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
L DY P + W +V A + ++ ITG G + +
Sbjct: 114 VLSFTDTPLDYLPAVMTSWEGMECYNYSPLVYAYDCENIAITGSGTLAPRMETWKKWFAR 173
Query: 118 ----MKFVVTKNEIKNVMVSWNHTGACSGDE-CRPRLVGFLGCRNVNVWNVRLREPAYWC 172
M + E+ + ++ G+ RP L+ CRNV + + +RE +W
Sbjct: 174 PQAHMDALKKLYEMASTDIAVEKRQMAEGENNLRPHLIHLNRCRNVLLEDFSIRESPFWT 233
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H+ C +R + + N NNDGID+E S + +I D GDDA+ K+
Sbjct: 234 IHLYMCKGGIVRRLDVKA--NGHNNDGIDLEMSRDFLIENCTFDQGDDAVVIKS 285
>gi|325103538|ref|YP_004273192.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972386|gb|ADY51370.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 632
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I+ ++ FGAKGD +T AIQ AIDAC + V G Y+T T+ LK +VTL +
Sbjct: 178 IYDIVKFGAKGDNQTVNTVAIQKAIDACT-ADGGGSVYIHDGIYVTGTLELKDNVTLFVQ 236
Query: 74 EDATLLGGPRIEDYPEE---------SSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK 124
+ L DYP++ + + ++ AE ++GIT G F
Sbjct: 237 AGSILRASSNHADYPQKICAFKYYRGNEHYQLIYAEGKKNIGIT----GGGIIDGFSHGD 292
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
N W G + E RPRL+ + C VNV ++ L PA W CDN +
Sbjct: 293 N--------WPWRGKSNEHE-RPRLIRMVQCTAVNVRDITLIRPANWTQLYEACDNVKLI 343
Query: 185 DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT-GPLYNLTATDSWIRT 243
++ + N DGIDI N + TGDDAIC K + P N+ R
Sbjct: 344 NVRVRAYTGQHNQDGIDISSCNGVEVKNFYAMTGDDAICLKAMSQKPTENIFVDGVVARY 403
Query: 244 KS-SAIKLGSASWFD 257
+ +A+K+G+ + D
Sbjct: 404 ANCNAVKIGTETHGD 418
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A ++AI + + PPG YLT T L SH+TL +
Sbjct: 42 SIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLA 101
Query: 74 EDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITG-GGVVDGQAM 118
+ A + ++P E Y+ L + DV ITG G +DGQ
Sbjct: 102 KGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGD 161
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ WN + RP LV F+ N+ + NV +W +H V C
Sbjct: 162 AW-------------WNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYC 208
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N +R ++I ++PN DG+D + SNN I I TGDD + K+
Sbjct: 209 RNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKS 256
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 119/283 (42%), Gaps = 42/283 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFGA GDG+ +T A + AI K Q+ PPG +LTA L S++TL
Sbjct: 65 VFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLF 124
Query: 72 IHEDATLLGGPRIEDY----PEESSRWY-----------VVLAENATDVGITG-GGVVDG 115
+ E+A +L + E Y P S Y + +N DV +TG G ++G
Sbjct: 125 LSENAEIL-ALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSING 183
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + R L + ++ N+ LR+ +W LH
Sbjct: 184 QGQTW-------------WKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHP 230
Query: 176 VRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------T 226
C N I +M+I F PN DGID + + +I I GDD I K T
Sbjct: 231 YDCKNVTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTT 290
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + IR+ SA I +GS + +NI I
Sbjct: 291 YGKPSKNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILI 333
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 39/280 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ + +FGA GDG +TAA +SAI A ++ P G +LTA L SH+TL +
Sbjct: 100 VYDLREFGAVGDGRTVNTAAFESAIAAIAERGG-GRLTVPAGRWLTAPFNLTSHMTLFLA 158
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
A +LG P + P E Y ++ ++ V ITG G ++GQ
Sbjct: 159 AGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQ 218
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ V + + ++ NHT R LV + N+ + N+ LR+ +W LH C
Sbjct: 219 SWWV---KFRRKLL--NHT--------RGPLVQLMRSSNIIISNITLRDSPFWTLHTYDC 265
Query: 179 DNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
N I + +I PN DGID + N VI I GDD I K+ Y
Sbjct: 266 KNVTISETTILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGR 325
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+T + IR+ SA + +GS ++ +N+ +
Sbjct: 326 PSANITIQNVVIRSMVSAGVSIGSEMSGGVSDVLVENVHV 365
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 46/285 (16%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFGA GDG+ +T A + AI A Q+ P G +LTA L SH+TL
Sbjct: 74 VFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLF 133
Query: 72 IHEDATLLGGPRIED------YPEESSRWY-----------VVLAENATDVGITG-GGVV 113
+ E A +LG I+D P S Y ++ +N DV ITG G +
Sbjct: 134 LDEGAVILG---IQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
GQ + W + R LV + R++ + N+ LR+ +W L
Sbjct: 191 SGQGKTW-------------WKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTL 237
Query: 174 HIVRCDNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
H C N +R+++I + PN DGID + + +I I GDD I K+
Sbjct: 238 HPYDCKNITVRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYG 297
Query: 227 --YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + +++ SA I +GS + +N+ +
Sbjct: 298 IAYGQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVV 342
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ ++GA+ G T AI +AI AC +V P G YLT + L S+V L++ E
Sbjct: 60 SIEEYGAEAGGEVLSTDAIAAAIKACNEAGG-GRVVVPKGVYLTGAVHLLSNVNLHLEEG 118
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
ATL +DY P SRW + A ++ ITG G +DG A
Sbjct: 119 ATLRFSRNPKDYLPLVRSRWEGMELMNYSPFIYAYQQENIAITGNGTLDGHADMEHWWPW 178
Query: 118 --------MKFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWN 162
+ + +N + ++ H G RP+ V C+NV + +
Sbjct: 179 CGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQFVQPFECKNVLIQD 238
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V+L W LH V C+N + + I + PNNDG D E N +I DTGDD I
Sbjct: 239 VKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPEACKNVLIKDCYFDTGDDCI 296
Query: 223 CPKT 226
K+
Sbjct: 297 AIKS 300
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP----PGNKPCQVRFPPGEY 57
Q + L + H S+ DFG GDG +TAA +SA+D G + P G++
Sbjct: 45 QSMYLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKW 104
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYP------------EESSRWYVVL--AENAT 103
LT L SH TL +H DA +LG + ++P +++ Y L N T
Sbjct: 105 LTGPFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLT 164
Query: 104 DVGITGG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
DV ITG G +DGQ + W+ + R L+ + V + N
Sbjct: 165 DVVITGANGTIDGQGAMW-------------WSKFHSNKLKYTRGYLIEVMHSDTVVISN 211
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V L W +H V N ++ ++I ++PN DGI+ + ++ I I +GDD +
Sbjct: 212 VTLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCV 271
Query: 223 CPKT 226
K+
Sbjct: 272 AIKS 275
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ +GAK DGI T AI A++ V P G +LT I LKS+V L+I +
Sbjct: 271 SIVRYGAKSDGITLSTPAINQAVNLAHEAGG-GVVVVPSGFWLTGPIVLKSNVNLHISQG 329
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDG------QAMKF 120
A L + ED+P + W + A A+++ ITG G++DG Q K
Sbjct: 330 ALLQFSNKREDFPLVKTTWEGEDAIRCQAPISAVEASNIAITGTGIIDGAGQVWRQVKKD 389
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG----------------------DECRP 147
+T+ + K ++ S + A G D RP
Sbjct: 390 KLTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAAGFNLNNCSEFKDFLRP 449
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V C V + + + W +H + C++ +RD+ + + NND +D+E N
Sbjct: 450 NMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLESCRN 509
Query: 208 TVITRVQIDTGDDAICPKT 226
++ DTGDD IC K+
Sbjct: 510 GLVEGCSFDTGDDGICIKS 528
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A SAI + Q+ PPG++LT + L SH TL
Sbjct: 62 HSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTL 121
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ +DA +L D+P+ R+ ++ N DV ITG G +DG
Sbjct: 122 FLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDG 181
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + + + N+ L W +H
Sbjct: 182 QGSTW-------------WDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHP 228
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I ++I + PN DGID + S N +I I +GDD I K+
Sbjct: 229 VYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKS 279
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 31/235 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA G +T AI SAI+AC +V P G +LT I KS+V L + E+A
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQSGGG-RVVVPAGTWLTGPIHFKSNVNLYLEENA 113
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 114 VLNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 173
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + TK ++ A + RP L+ F C+NV + ++ E +
Sbjct: 174 PQSHLEALKELYTKASTNIPVIE--RQMAIGENHLRPHLIHFNRCKNVLLDGFKICESPF 231
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W +H+ CD +R++ + + NNDGID E S N ++ D GDDA+ K
Sbjct: 232 WTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAK DGI +T AI AI +V P G +LT I L S+V L ++
Sbjct: 62 NIIDFGAKPDGITLNTKAINDAIQQVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN 120
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
+ +L YP E + A NA ++ ITG GV DG K
Sbjct: 121 SLVLFSADHSLYPIINTSFEGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKD 180
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG------------------------DEC 145
+T+ + K ++ S + GA G D
Sbjct: 181 KLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL 240
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F+ C V + + WCLH + C+N I +++ + + N D +D+E
Sbjct: 241 RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC 300
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 301 NKALIINNSFDAGDDGICIKS 321
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATI 62
L S H S+ +FGA DG+ +T A ++AI + ++ P G +LT +
Sbjct: 63 LTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSF 122
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGIT 108
L SH+T+++ DA ++G D+P ++ N TDV IT
Sbjct: 123 NLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIIT 182
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G +DGQ + WN + + RP L+ + V + N+
Sbjct: 183 GANGTIDGQGELW-------------WNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMN 229
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-- 225
+W +H V C ++ ++I ++PN DGID + S+N I I GDD + K
Sbjct: 230 APFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSG 289
Query: 226 ------TYTGPLYNLTATDSWIRTKSSA-IKLGS 252
++ P N++ + +T++SA I GS
Sbjct: 290 WDEYGISFAHPSSNISIRNITGQTRNSAGIAFGS 323
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 48/255 (18%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA GDG T A AIDA ++ P G + T I LKS++ L++ + A +
Sbjct: 54 DFGAVGDGTQLCTEAFARAIDALSQKGG-GRLTVPAGVWFTGPIVLKSNINLHVEKGAVI 112
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKFVVT 123
L P I+ YP + + + N T+V ITG G +DG + VT
Sbjct: 113 LFSPDIDLYPLVETVFEGLDTRRCQSPISGRNLTNVAITGQGAIDGNGHFWRPLKRQKVT 172
Query: 124 KNEIKNVMVS----------WNHTGACSGDE----------------------CRPRLVG 151
+++ K + + G GD RP +V
Sbjct: 173 ESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEEWQSIRPFLRPVMVS 232
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
+ C+NV + V + W LH + C+N I ++ + N DG+D+E N +I
Sbjct: 233 LIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCRNALIV 292
Query: 212 RVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 293 NSTFDVGDDGICLKS 307
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATI 62
L S H S+ +FGA DG+ +T A ++AI + ++ P G +LT +
Sbjct: 63 LTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSF 122
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGIT 108
L SH+T+++ DA ++G D+P ++ N TDV IT
Sbjct: 123 NLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIIT 182
Query: 109 GG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
G G +DGQ + WN + + RP L+ + V + N+
Sbjct: 183 GANGTIDGQGELW-------------WNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMN 229
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK-- 225
+W +H V C ++ ++I ++PN DGID + S+N I I GDD + K
Sbjct: 230 APFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSG 289
Query: 226 ------TYTGPLYNLTATDSWIRTKSSA-IKLGS 252
++ P N++ + +T++SA I GS
Sbjct: 290 WDEYGISFAHPSSNISIRNITGQTRNSAGIAFGS 323
>gi|332159791|ref|YP_004296368.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664021|gb|ADZ40665.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 623
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 123/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFG DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 170 QIVNVRDFGVIDDGKTLNTKAIQQAIDSCKPG---CRVEIPVGTYKSGALWLKSDMTLNL 226
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 227 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 286
Query: 116 QAM-----------------KFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 287 NGWLCAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 346
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 347 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 405
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 406 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 464
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
TA IQ ID ++ F G Y T ++ LKS+V L++ A L ++YP
Sbjct: 17 TATIQGYIDQLHQAGGG-RLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVV 75
Query: 91 SSRWY---------VVLAENATDVGITGGGVVDGQAMKF-VVTKNEIKNVMVSWNHTGAC 140
SRW + A+ A ++ ITG G +DGQ K+ V +N + +
Sbjct: 76 VSRWEGVKREVYASCIYADGAENIAITGFGTIDGQGQKWWDVFRNHPEQL---------- 125
Query: 141 SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
+ RP+L+ F C+ + + +V L W ++ + C + + ++ I ++PN DGI
Sbjct: 126 --EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGI 183
Query: 201 DIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSWIRTKSSAIKLGSAS 254
D E N I+ ID GDD I K+ T N+T ++ + + LGS
Sbjct: 184 DPESCKNVRISNCLIDVGDDCIAIKSGTEETKERVSCENITISNCQMLHGHGGVVLGSEM 243
Query: 255 WFDFKALVFDN 265
D + + N
Sbjct: 244 SGDIRNVTISN 254
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEE 90
TA IQ ID ++ F G Y T ++ LKS+V L++ A L ++YP
Sbjct: 17 TATIQGYIDQLHQAGGG-RLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVV 75
Query: 91 SSRWY---------VVLAENATDVGITGGGVVDGQAMKF-VVTKNEIKNVMVSWNHTGAC 140
SRW + A+ A ++ ITG G +DGQ K+ V +N + +
Sbjct: 76 VSRWEGVKREVYASCIYADGAENIAITGFGTIDGQGQKWWDVFRNHPEQL---------- 125
Query: 141 SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
+ RP+L+ F C+ + + +V L W ++ + C + + ++ I ++PN DGI
Sbjct: 126 --EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGI 183
Query: 201 DIEDSNNTVITRVQIDTGDDAICPKTYTGPLY------NLTATDSWIRTKSSAIKLGSAS 254
D E N I+ ID GDD I K+ T N+T ++ + + LGS
Sbjct: 184 DPESCKNVRISNCLIDVGDDCIAIKSGTEETKERVSCENITISNCQMLHGHGGVVLGSEM 243
Query: 255 WFDFKALVFDN 265
D + + N
Sbjct: 244 SGDIRNVTISN 254
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 30/239 (12%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V GA G+ T A + A+ G ++ PPG+YL +RL SH+ + A
Sbjct: 5 VTTLGADPTGLRESTDAFREALSRIE-GAGGGRLHVPPGDYLVGPLRLCSHLEFEVARGA 63
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA---------- 117
+ + YP +RW ++ E A D+ I+GGGV+DGQ
Sbjct: 64 RIRFVQDPDRYPVVFTRWEGVECHAYAPMIFVEGAEDIRISGGGVIDGQGDAWWRMYRDY 123
Query: 118 -----MKFVVTKNE---IKNVMVSWNHTGACSGDE--CRPRLVGFLGCRNVNVWNVRLRE 167
+F + E +N +S +G + RP L+ R V + + LR
Sbjct: 124 REGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVVIEGIILRN 183
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A+W HI+ D +IR +S + PN DG++++ S N I D GDD + K+
Sbjct: 184 SAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGDDCLGLKS 242
>gi|330859829|emb|CBX70161.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica W22703]
Length = 608
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 123/299 (41%), Gaps = 58/299 (19%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I +V DFG DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 155 QIVNVRDFGVIDDGKTLNTKAIQQAIDSCKPG---CRVEIPVGTYKSGALWLKSDMTLNL 211
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDG 115
A LLG +DYP + E NA D + ITG GV+DG
Sbjct: 212 QAGAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDG 271
Query: 116 QA-----------------MKFVVTKNEI--KNVMVSWNHTGACSGD---------ECRP 147
++V +KN ++ +++ N D + R
Sbjct: 272 NGWLRAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRS 331
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ G NV + +R PA+ + + N + I+ ++ N DGI+ +S N
Sbjct: 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGL-IHQTYDANNGDGIEFGNSQN 390
Query: 208 TVITRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
++ DTGDD I TG P+ +++ R AI GS +W +
Sbjct: 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIE 449
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 132/310 (42%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L L + T + V + GAK DG +T I S ID N + FP G YLT
Sbjct: 12 LFCLCAVTVLRAERVDMLKAGAKVDGKTLNTKLINSTIDRLN-ANGGGTLFFPAGTYLTG 70
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+IR+KSH+TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 71 SIRMKSHITLELEAGATLLFSDSFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 130
Query: 111 GVVDGQA----MKFV-----VTKNEIKNV---MVSWN---------------HTGACSGD 143
G +DGQ M+F + N ++NV W+ + G
Sbjct: 131 GTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQRR 190
Query: 144 ECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C++V + V++ +W ++ C+N ++ ++I+ + +PN DGI+ E
Sbjct: 191 FFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTIH-NVPSPNTDGINPE 249
Query: 204 DSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 250 SCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHGGVVIGSEMS 309
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 310 GGVRKVTISN 319
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 27/260 (10%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A Q+A+ Q+ PPG +LT + L SH+TL
Sbjct: 41 HSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTL 100
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGG-----VVDGQAMKFVVTKN 125
+ +DA +L ++ S W V A + GI G +++G + VV
Sbjct: 101 FLEKDAVILAS-------QDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTG 153
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ + +V W+ + S + RP LV F+ NV V N+ + +H V C N
Sbjct: 154 DNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNL 213
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TYTGPLYN 233
+I ++ +P GI + S N I I+ G DAI K +Y P N
Sbjct: 214 YIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTAN 273
Query: 234 LTATDSWIRTKS-SAIKLGS 252
+ + ++R S S+I GS
Sbjct: 274 VQIRNVYLRAASGSSISFGS 293
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A ++AI + + PPG YLT + L SH+TL +
Sbjct: 42 SITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLA 101
Query: 74 EDATLLG------GPRIEDYPE-------ESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
+ A + P I+ P R+ + + DV ITG G +DGQ
Sbjct: 102 KGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGE 161
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + + RP L+ F + + + NV + +W +H V C
Sbjct: 162 -------------VWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYC 208
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
N I ++I ++PN DGID + S N I I TGDD + K+ Y P
Sbjct: 209 SNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRP 268
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+T + + I +GS + K ++ ++IT+
Sbjct: 269 SSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEHITL 306
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI-----DACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
SV FG GDG +TAA A+ A P G ++ PPG +LT L S +TL
Sbjct: 46 SVASFGGAGDGRTLNTAAFARAVATIERRAVPGG---AELYVPPGVWLTGPFNLTSRMTL 102
Query: 71 NIHEDATLLGG------PRIEDYP------EESSRWYVVLAENA--TDVGITG-GGVVDG 115
+ A + P IE P E Y+ L + DV ITG G +DG
Sbjct: 103 FLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTIDG 162
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ + RP L+ + ++ V NV ++ +W +H
Sbjct: 163 QGTPW-------------WDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHP 209
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N IR+++I ++PN DGID + S+N I I TGDDAI K+
Sbjct: 210 VYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKS 260
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHE 74
+ FGAKGDG A A+ A G + P GEY L I S+V L + E
Sbjct: 50 ITSFGAKGDGKKDCKPAFDKAMKRAAKSGG--AHIVVPAGEYKLNGPIHFVSNVCLELQE 107
Query: 75 DATLLGGPRIEDY-PEESSRWYVVLAENAT---------DVGITGGGVVDGQA-MKFVVT 123
A L P E Y P + W +N + ++ I G G +DG A F
Sbjct: 108 GAVLKFAPEPEYYLPLVKTSWEGTFLQNYSPFIYGYQLENISIIGKGTIDGNAGSTFATW 167
Query: 124 KNEIK---NVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
K++ K + NH G RP+L+ F C+N+ + V + +WC+
Sbjct: 168 KSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFITNSPFWCI 227
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
H+++ +N R + D NNDGID E + N +I ++ + GDD + K
Sbjct: 228 HLLKSENIICRGLRY--DAKLVNNDGIDPEFTRNLLIENIEFNNGDDNVAIK 277
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 27/260 (10%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A Q+A+ Q+ PPG +LT + L SH+TL
Sbjct: 39 HSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGG-----VVDGQAMKFVVTKN 125
+ +DA +L ++ S W V A + GI G +++G + VV
Sbjct: 99 FLEKDAVILAS-------QDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTG 151
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ + +V W+ + S + RP LV F+ NV V N+ + +H V C N
Sbjct: 152 DNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNL 211
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TYTGPLYN 233
+I ++ +P GI + S N I I+ G DAI K +Y P N
Sbjct: 212 YIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTAN 271
Query: 234 LTATDSWIRTKS-SAIKLGS 252
+ + ++R S S+I GS
Sbjct: 272 VQIRNVYLRAASGSSISFGS 291
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 37/284 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHED 75
+ DFGA GDG + AI C N ++ P G Y + + KS+V +++ +
Sbjct: 49 ITDFGAVGDGKTLCKEPFEKAITICS-DNGGGKITVPAGTYYMNGPLVFKSNVNVHLEKG 107
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L DY P +RW ++ A + ++ +TG G V+G K N
Sbjct: 108 AILDFSTNESDYLPAVITRWEGTELFNYSPLIYAYHVQNIALTGEGTVNGNGSKKFSPWN 167
Query: 126 EIK-------------NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
I+ NV V G G + RP + GC NV + V + + +W
Sbjct: 168 NIQTVEQEMLRKMGRTNVPVYRRVFG--EGYKLRPGFIEPFGCANVRIEGVTIIDSPFWV 225
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + C N +R++++ D + NNDG D E N +I TGDDAI K+
Sbjct: 226 IHPIFCSNVIVRNVTV--DSHNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDA 283
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ + R+K + + +GS + + +NITI
Sbjct: 284 WRIGQPTENVVIRNCSFRSKINGVCIGSEIAGGVRNIFIENITI 327
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 31/235 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYL-TATIRLKSHVTLNIH 73
S+I FGAKGDG A A+ A G + P GEYL I S+V L +
Sbjct: 52 SLISFGAKGDGKKDCKPAFDKAMKRAAHMGG--AHIVVPAGEYLLNGPIHFVSNVCLELQ 109
Query: 74 EDATLLGGPRIEDY-PEESSRWYVVLAENAT---------DVGITGGGVVDGQAMKFVVT 123
E ATL Y P + W +N + +V I G GV+DG A T
Sbjct: 110 EGATLKFSSEPAFYLPLVKTSWEGTFLQNYSPFIYGYQLENVSIIGKGVIDGNAGTTFAT 169
Query: 124 ---KNEI----------KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
K +I K V V+ + G G RP LV F C+N+ + +V + +
Sbjct: 170 WKSKQKIGQQLSREMNHKEVPVAERNFG--EGYWLRPHLVQFFDCKNITIEDVFITNAPF 227
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
WC+H+++ +N R I D NNDGID E + N +I ++ + GDD + K
Sbjct: 228 WCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNLLIENIEFNNGDDNVAIK 280
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP----GNKPCQVRFPPGEY 57
Q + L H SV DFG GDG +TAA +SA+D G + P G++
Sbjct: 66 QSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKW 125
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENAT 103
LT L SH TL +H+DA +LG + ++P + R+ ++ N T
Sbjct: 126 LTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLT 185
Query: 104 DVGITGG-GVVDGQAMKF--VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
DV ITG G +DGQ + KN++K R L+ + + +
Sbjct: 186 DVVITGSNGTIDGQGAMWWSKFHKNQLKYT---------------RGYLIELMHSDTIYI 230
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
N+ L W +H V N ++ ++I N+PN DGI+ + ++ I I +GDD
Sbjct: 231 SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDD 290
Query: 221 AICPKT 226
+ K+
Sbjct: 291 CVAIKS 296
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A + A+ + + PPG YLT + L SH+TL +
Sbjct: 9 SIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLA 68
Query: 74 EDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQAM 118
A + ++P + + DV ITG G +DGQ
Sbjct: 69 RGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGTIDGQGD 128
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP LV F+ R + + NV R +W +H V
Sbjct: 129 -------------VWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYS 175
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLT 235
N IR ++I ++PN DGID + S+N I I TGDD + K+ G Y
Sbjct: 176 RNVVIRYVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRP 235
Query: 236 ATDSWIR-----TKSSAIKLGSASWFDFKALVFDNITI 268
++D IR + S I +GS + K ++ +N+ +
Sbjct: 236 SSDITIRRITGSSPFSGIAVGSETSGGVKNVLVENVNL 273
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP----GNKPCQVRFPPGEY 57
Q + L H SV DFG GDG +TAA +SA+D G + P G++
Sbjct: 46 QSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKW 105
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENAT 103
LT L SH TL +H+DA +LG + ++P + R+ ++ N T
Sbjct: 106 LTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLT 165
Query: 104 DVGITGG-GVVDGQAMKF--VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
DV ITG G +DGQ + KN++K R L+ + + +
Sbjct: 166 DVVITGSNGTIDGQGAMWWSKFHKNQLKYT---------------RGYLIELMHSDTIYI 210
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
N+ L W +H V N ++ ++I N+PN DGI+ + ++ I I +GDD
Sbjct: 211 SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDD 270
Query: 221 AICPKT 226
+ K+
Sbjct: 271 CVAIKS 276
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGAK DGI +T AI AI +V P G +LT I L S+V L ++
Sbjct: 62 NIIDFGAKPDGITLNTKAINDAIQQVN-AKGGGKVIIPEGLWLTGPIELLSNVNLYTEKN 120
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKF 120
A +L YP E + A +A ++ ITG GV DG K
Sbjct: 121 ALVLFSADHSLYPIINTSFEGLETRRCQSPISARDAENIAITGHGVFDGNGDTWRPTKKD 180
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG------------------------DEC 145
+T+ + K ++ S + GA G D
Sbjct: 181 KLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMRDWL 240
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ F+ C V + + WCLH + C+N I +++ + + N D +D+E
Sbjct: 241 RPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESC 300
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 301 NKALIINNSFDAGDDGICIKS 321
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A + A+ + + P G +L + L SH+TL +
Sbjct: 51 SIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHMTLFLA 110
Query: 74 EDATL------LGGPRIEDYPE-------ESSRWYVVL-AENATDVGITGG-GVVDGQAM 118
A L G P +E P R+ + + DV ITG GV+DGQ
Sbjct: 111 RGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVIDGQGE 170
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + + RP LV F+ +++ N+ L+ +W +H V C
Sbjct: 171 -------------VWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYC 217
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
DN + +M I ++PN DG+D + S+N I I TGDD + K+
Sbjct: 218 DNVVVTNMMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKS 265
>gi|398899483|ref|ZP_10649037.1| endopolygalacturonase [Pseudomonas sp. GM50]
gi|398182587|gb|EJM70098.1| endopolygalacturonase [Pseudomonas sp. GM50]
Length = 605
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 5 LLLSTTHIH-IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
L+ TT + + V +GAKGDG DT AIQ+AI+AC G C+V P G Y + +
Sbjct: 145 LVQRTTKVAPVFDVKKYGAKGDGSSLDTLAIQNAIEACTVG---CKVLLPKGIYKSGALY 201
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLA------------------ENATDV 105
LKS++TL I E ATLLG R EDYP Y + ++ ++
Sbjct: 202 LKSNMTLEIAEGATLLGSERAEDYPLAGYIQYPYSSTVRPASLINALPRDPRQHQSFENI 261
Query: 106 GITGGGVVD--------------GQAMKF-------------VVTKNEIKNVMVSWNHTG 138
I G G +D GQ + F ++ K +++ + +
Sbjct: 262 RIVGKGTLDGNGWKRRTDIVDERGQPLPFYLPSDNTRYQQDGILAKAQVEQAVARGMNVK 321
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
G + R L+ +NV + PA+ + + +N + + + + ++ N D
Sbjct: 322 DAYG-QMRSSLITLRNVKNVFYGGFTVLNPAFHGIMNLETENVVLAN-TTHKTYDANNGD 379
Query: 199 GIDIEDSNNTVITRVQIDTGDDAICPKTYTG--PLYNLTATDSWI 241
GI+ +S ++ DTGDD + TG ++ D+WI
Sbjct: 380 GIEFANSKGAMVFNNFFDTGDDCVNFAAGTGADAVHQKPQEDAWI 424
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 113/266 (42%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H+ + ++G GDG +TAA A+ + G+ + P G++LT L SH TL
Sbjct: 38 HVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSHFTL 97
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENATDVGITG-GGVVDG 115
+ A +L +ED+P E R+ +A N TDV ITG G ++G
Sbjct: 98 FLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTING 157
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q V W+ A R L+ L N+ + NV + W LH
Sbjct: 158 QGQ-------------VWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHP 204
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLY 232
C N I ++I N+PN DGID + S++ I I +GDD I K+ G +
Sbjct: 205 TYCTNVTISGITILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKF 264
Query: 233 NLTATDSWIR------TKSSAIKLGS 252
N+ + IR S+ I LGS
Sbjct: 265 NMPSQHILIRRLTCISPTSAMIALGS 290
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFGA GDG+ +T A + AI Q+ PPG +LTA L S++TL
Sbjct: 68 VFNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLF 127
Query: 72 IHEDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQ 116
+ E+A +L P + P E Y + +N DV +TG G ++GQ
Sbjct: 128 LAENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQ 187
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W + R LV + ++ N+ LR+ +W LH
Sbjct: 188 GQTW-------------WKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPY 234
Query: 177 RCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TY 227
C N I +M+I F PN DGID + + +I I GDD I K TY
Sbjct: 235 DCKNVTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTY 294
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + IR+ SA I +GS + +NI I
Sbjct: 295 GRPSKNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILI 336
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDGI +T A Q AI + Q+ P G++LT + L SH TL
Sbjct: 52 HSASITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTL 111
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H+DA LLG ++++P + R+ ++ N TD+ +TG G +DG
Sbjct: 112 FLHKDAVLLGSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDG 171
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + N+ + N+ L W +H
Sbjct: 172 QGAFW-------------WQQFKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHP 218
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + I +GDD + K+
Sbjct: 219 VYSSNILIQGITIIAPVTSPNTDGINPD---------CYIISGDDCVAVKS 260
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA G +T AI SAI+AC +V P G +LT I KS+V L + E+A
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQSGGG-RVVVPAGTWLTGPIHFKSNVNLYLEENA 113
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDG----------- 115
L DY P + W ++ A +V ITG G +
Sbjct: 114 VLNFTDNPSDYLPAVMTSWEGLECYNYSPLLYAFECENVAITGKGTLQPKMDTWKVWFKR 173
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+A+K + K ++ A + RP L+ F C+NV + ++RE +
Sbjct: 174 PQPHLEALKELYAKASTNIPVIE--RQMAIGENHLRPHLIHFNRCKNVLLDGFKIRESPF 231
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H+ CD +R++ + + NND ID E S N ++ D GDDA+ K
Sbjct: 232 WTIHLYMCDGGLVRNLDVKA--HGHNNDDIDFEMSRNFLVEDCSFDQGDDAVVIKA 285
>gi|237710404|ref|ZP_04540885.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229455866|gb|EEO61587.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 437
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 29/271 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G + + T IQ ID N + P G Y + ++ K L + +
Sbjct: 54 YDLSDYGIESNPHIVQTQKIQKIIDEAA-ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSK 112
Query: 75 DATLLGGPRIEDYP-------EESSRWY--VVLAENATDVGITGGGVVDGQAMKFVVTKN 125
ATLLG I D+P E +++ + A+ I+G G +DG +
Sbjct: 113 GATLLGSENIMDFPLLMTRIEGEYCKYFGASINADGLDTFTISGKGTIDGNGTPYW---- 168
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + DE RPRL+ CRNV V +V L+ +W H RCD + +
Sbjct: 169 KAFRLRREWN-PQCTNKDEMRPRLLYIAHCRNVQVADVTLQNSPFWTSHYYRCDKVKLLN 227
Query: 186 MSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK----------TYTGPLY 232
+ I+ + + DGID++ N I + DDAIC K TY GP
Sbjct: 228 LRIFSPIKPIKSASADGIDMDVCTNFHIKGCRFTVNDDAICFKGGKGPYADQDTYNGPNK 287
Query: 233 NLTATDSWI-RTKSSAIKLGSASWFDFKALV 262
N+ D + T S + GS S + L+
Sbjct: 288 NILIEDCFFDHTTGSCMTCGSESIHVYNVLM 318
>gi|404406291|ref|ZP_10997875.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 476
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLG----GPRIED 86
TAA+Q AIDAC K + FP GEYL +RL SH L++ A + E
Sbjct: 133 TAAVQRAIDAC--AKKGRTLIFPAGEYLCGQLRLPSHAHLHLERGAVIRADASSAAAFES 190
Query: 87 YPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECR 146
+ +R ++ + ++A D+ ITG G +DG S GD+ R
Sbjct: 191 NDDVKTRRFIYV-KDAKDIRITGLGAIDG-----------------SGRALREKFGDKAR 232
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
RL+ + +++ V R+P W I+ C + +R++ + D N DG D + S
Sbjct: 233 IRLLLAVNSSDLHFEGVMFRDPGSWNTQILLCRDVVLRNIKLMNDTELSNTDGFDPDASR 292
Query: 207 NTVITRVQIDTGDDAICPKT--YTGPL---YNLTATDSWIRTKSSAIKLGSAS 254
N +I DD + KT Y+G L N+T TK S++K+G+ +
Sbjct: 293 NLLIENCFGYCSDDNVAVKTTGYSGYLDDAENITVRGCVFLTKKSSLKVGTET 345
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 7 LSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
+ + ++++D+GA DG T AI +AI+A V P G YLT I KS
Sbjct: 47 IGENKMQAYNIVDYGAPQDGKTPATEAIANAIEAASNAGGGTVV-IPSGTYLTGAIFFKS 105
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAE---------NATDVGITGGGVVDGQA 117
++ L++ A L DYP SRW V E N ++ +TG G+++G
Sbjct: 106 NIELHLSPGAILSFSTNPADYPVVESRWEGVQREVHASCIYGQNLENISVTGSGILEGNG 165
Query: 118 MKF-VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ +N + + RP+L+ F C+ V + ++ L+ W ++ +
Sbjct: 166 QPWWEKHRNHPEELQYP------------RPKLISFDRCQRVTIKDIMLKNSPSWTINPI 213
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG------P 230
C N I ++SI ++PN DGI+ E +N I+ ID GDD I K T
Sbjct: 214 ACYNVTIDNLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA 273
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
N+T T+ + + LGS D + + N
Sbjct: 274 CENITITNCTMVHGHGGVVLGSEMSGDIRNVTISN 308
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + + SH TL
Sbjct: 68 HSASLTDFGGVGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTL 127
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+++DA LL + ++P + R+ + N TDV +TG G +DG
Sbjct: 128 YLNKDAVLLASQDMNEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDG 187
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W + RP L+ + + + N+ W +H
Sbjct: 188 QGAFW-------------WQQFYNKRLNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHP 234
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
V N I+ ++I +PN DGI+ + NT I I +GDD + K+ +
Sbjct: 235 VYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKF 294
Query: 228 TGPLYNLTATD-SWIRTKSSAIKLGS 252
P L + I +S+AI LGS
Sbjct: 295 GWPTKQLVIRRLTCISPQSAAIALGS 320
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI---DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
S+ DFG GDG +T A + AI + + PPG YLT L SH+TL++
Sbjct: 45 SLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSHMTLHL 104
Query: 73 HEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDGQA 117
A + ++P + + DV ITG G +DGQ
Sbjct: 105 AAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQG 164
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
V WN + RP LV F+ +++ + NV ++ +W +H V
Sbjct: 165 D-------------VWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVY 211
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N IR +I ++PN DGID + S+N I I TGDD + K+
Sbjct: 212 CSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 260
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 108/258 (41%), Gaps = 49/258 (18%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V +GAK DGI +T +I +AIDAC N V G +LT I+LKS+V L++ DA
Sbjct: 62 VEKYGAKPDGITLNTKSINAAIDACSK-NGGGVVFLGGGVWLTGPIQLKSNVNLHVKRDA 120
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKFV 121
LL Y W + A N +V ITG G++DG K
Sbjct: 121 ILLFTKDKSQYKLVEGNWEGKPALVNESPISAFNVENVAITGEGIIDGSGEVWRLVKKGK 180
Query: 122 VTKNEIKNVMV----------SWNHTGAC-SGDEC----------------------RPR 148
+T ++ KN++ SW + + GDE RP
Sbjct: 181 LTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGSKLADYEPMKDFYRPN 240
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L + + + V + WCLH + ++ +R++ + + N DGIDIE N
Sbjct: 241 LFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIESCKNV 300
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDD IC K+
Sbjct: 301 LIENSTFDVGDDGICIKS 318
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 31/235 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYL-TATIRLKSHVTLNIH 73
S+I FGAKGDG A A+ A G + P GEYL I S+V L +
Sbjct: 30 SLISFGAKGDGKKDCKPAFDKAMKRAAHMGG--AHIVVPAGEYLLNGPIHFVSNVCLELQ 87
Query: 74 EDATLLGGPRIEDY-PEESSRWYVVLAENAT---------DVGITGGGVVDGQAMKFVVT 123
E ATL Y P + W +N + +V I G GV+DG A T
Sbjct: 88 EGATLKFSSEPAFYLPLVKTSWEGTFLQNYSPFIYGYQLENVSIIGKGVIDGNAGTTFAT 147
Query: 124 ---KNEI----------KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
K +I K V V+ + G G RP LV F C+N+ + +V + +
Sbjct: 148 WKSKQKIGQQLSREMNHKEVPVAERNFG--EGYWLRPHLVQFFDCKNITIEDVFITNAPF 205
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
WC+H+++ +N R I D NNDGID E + N +I ++ + GDD + K
Sbjct: 206 WCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYTRNLLIENIEFNNGDDNVAIK 258
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 106/261 (40%), Gaps = 39/261 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FG KGDG +T A ++AI AC +V PPG + T I L SHV L + +
Sbjct: 45 SILQFGGKGDGKALNTEAFRAAIQACAKAGG-GRVVVPPGTFRTGPIELASHVALIVEKG 103
Query: 76 ATLLGGPRIEDY----PEESSRWYV----------VLAENATDVGITGGGVVDGQAMKFV 121
A + R D+ P +++ + + D+ I G G++DG +
Sbjct: 104 AIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGTKLDDIAIAGEGIIDGAGSGWW 163
Query: 122 VTKNEIKNVMV------------SWNHTGACSGDEC---------RPRLVGFLGCRNVNV 160
++ + T S RP L+ C V++
Sbjct: 164 AKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDCARVHL 223
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
V LR + C + + D++I+ + PN DGID +S + +I R IDTGDD
Sbjct: 224 QGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTIDTGDD 283
Query: 221 AICPK---TYTGPLYNLTATD 238
I K P N+T TD
Sbjct: 284 NIAVKGGGVANEPTENVTVTD 304
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 28/260 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGAKGDGI DT IQSA+ ACP K +V P G Y ++ LK +V + + +
Sbjct: 94 NVRDFGAKGDGIQDDTLFIQSAVMACP---KDSRVLVPAGTYRIVSLFLKDNVKIELEKG 150
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV--- 132
A L +P ++ ++G G + VVT I+N ++
Sbjct: 151 AVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPL--PMFSAVVTGINIENAVIYGR 208
Query: 133 ------------SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+W H RPR+V C++V + + LR W +H ++
Sbjct: 209 GVIEGNAGFGEENWWHDPKRMKTAFRPRMVFLERCKHVVIQGLTLRNSPSWNIHPYFSEH 268
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TYTGPLY 232
D+ + ++PN DG+D E + IT + GDD I K TY P
Sbjct: 269 LKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYKRPSE 328
Query: 233 NLTATDSWIRTKSSAIKLGS 252
++ + +R ++ +GS
Sbjct: 329 DIVVSRCCMRDGHGSVTIGS 348
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 121/305 (39%), Gaps = 53/305 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ GA DG+ +TAAI AID C V P G +LT + LKS+V L++ +
Sbjct: 40 AISKLGAVADGLTLNTAAINKAIDQCTKAGGGV-VLVPRGLWLTGPVTLKSNVNLHLAKG 98
Query: 76 ATLLGGPRIEDYP--------EESSRWYVVLAE-NATDVGITGGGVVDG----------- 115
A L R E YP EE+ R ++ ++ ITG G++DG
Sbjct: 99 ALLQFTNRREVYPLINTTWEGEEAIRNQAPISGVGLENIAITGEGILDGAGEAWRMVKKG 158
Query: 116 -----QAMKFVVTKNEIKNVMVSWNHT-----GACS--------------GDECRPRLVG 151
Q K V + + + +W T GA D RP ++
Sbjct: 159 KLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTYYEGIKDFLRPNMLS 218
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
C+ + + V + WCLH + C++ +R ++ + N DG+D+E N ++
Sbjct: 219 LTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLESCRNGLVD 278
Query: 212 RVQIDTGDDAICPKTYTG--------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVF 263
D GDD IC K+ P N+T +S + +GS K L
Sbjct: 279 DCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFVIGSEMSGGVKNLYV 338
Query: 264 DNITI 268
N T
Sbjct: 339 SNCTF 343
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 25/229 (10%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHEDAT 77
FGA + D AI A++ N ++ G Y + I L SHV +++ E A
Sbjct: 51 QFGALPNDAKDDRKAIIKALNYLKKRNG-GKLIIGKGIYEINGPIHLPSHVNVHLQEGAV 109
Query: 78 LLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK----FVVT 123
L P+ E Y P + W ++ A+N T++ ITG GV+DG+ K F
Sbjct: 110 LRFAPKPELYLPVVFTSWEGTFLYNYSPLIYAKNETNIAITGAGVIDGEGSKVWSTFKAE 169
Query: 124 KNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ K + NH + RP L+ F+ C+N+ + V + +W H +
Sbjct: 170 EQADKLLSRKMNHEEQPIASRQFGKDSKLRPHLLQFIDCKNILIEGVHFEDSPFWTTHFL 229
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
R IR +S + + NNDGID+E NN +I V + DD I K
Sbjct: 230 RSSEITIRGISF--NAHNKNNDGIDLEYVNNVLIENVDFNNSDDNIAIK 276
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ DFG GDG +T A ++AI + + PPG +LT + L SH+TL +
Sbjct: 43 SIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLTSHMTLYLA 102
Query: 74 EDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITG-GGVVDGQAM 118
A + P I P + + DV ITG G +DGQ
Sbjct: 103 RGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENGTIDGQGD 162
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ WN + RP LV FL R + + NV + +W +H V C
Sbjct: 163 -------------IWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYC 209
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR ++I ++PN DGID + S+N I I TGDD + K+
Sbjct: 210 SNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS 257
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 30/234 (12%)
Query: 10 THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSH 67
T H ++ +FGA GDG+ +T Q+AI Q+ P G +LT + L SH
Sbjct: 32 TRPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSH 91
Query: 68 VTLNIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GV 112
+TL + +DA ++G + ++P + ++ N TDV ITG GV
Sbjct: 92 LTLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGV 151
Query: 113 VDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+DGQ + + WN + + RP LV F + + N+ W
Sbjct: 152 IDGQGLTW-------------WNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWA 198
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H V C N + +++I + P +DGI + +N I +I DAI K+
Sbjct: 199 IHPVYCSNVTVNNITIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKS 252
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 53/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GAK DG+ +T AI AI+AC V P G +LT I LK++V L+I ++
Sbjct: 272 NICRYGAKADGLTVNTKAISQAIEACHAAGGGT-VLVPAGLWLTGPIVLKNNVNLHIAKN 330
Query: 76 ATLLGGPRIEDYP--------EESSRWYV-VLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L +DYP +ES R + + T++GITG GV+DG + K +
Sbjct: 331 ALLQFSRNHDDYPIVITTWEGQESYRCQAPIWGVDLTNIGITGEGVLDGGGEVWRAIKRD 390
Query: 127 IKNVMVSWNHTGACSG------------------------------------------DE 144
K W + G D
Sbjct: 391 -KQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNGIHPTPTELESYKDF 449
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP ++ C+NV + V + W +H + C++ IR++++ + N+D +D+E
Sbjct: 450 LRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLES 509
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N ++ DTGDD I K+
Sbjct: 510 CRNGIVEGCTFDTGDDGITIKS 531
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAI----DACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
H + DFG GDG +T Q+AI P G Q+ P G++LT + L SH
Sbjct: 51 HSAVLTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGG--AQLIIPAGKWLTGSFNLTSHF 108
Query: 69 TLNIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVV 113
TL +H++A LL ++P R+ ++ N DV ITG G +
Sbjct: 109 TLFLHKEAVLLASQDEAEWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTI 168
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DGQ + WN ++ RP L+ L + + N+ L W +
Sbjct: 169 DGQGATW-------------WNKFHKGLLNQTRPYLIELLYSHKIQISNLILINSPSWNV 215
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H N I+ ++I ++PN DGI+ + NT I I +GDD I K+
Sbjct: 216 HPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 268
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKP-CQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG +T A + AI G+K ++ P G ++T + L S+ TL
Sbjct: 69 VMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLF 128
Query: 72 IHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITG-GGVVDGQ 116
+ A +L P IE P ++ ++V ITG G +DGQ
Sbjct: 129 LQRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQ 188
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R LV + N+ + N+ + +W +H V
Sbjct: 189 GKMWW---------ELWWNRTL----NHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 235
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I+DM+I N PN DGID + S N I I++GDD + K+
Sbjct: 236 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 285
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V GA G+ T A + A+ ++ PPG+YL +RL SH+ + A
Sbjct: 5 VTTLGADPTGLRESTDAFREALSRIEAAGG-GRLHVPPGDYLVGPLRLCSHLEFEVARGA 63
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAM--------- 118
+ + YP +RW ++ E A DV I+GGGV+DGQ
Sbjct: 64 RIRFVQDPDRYPVVFTRWEGVECHAYAPMLFVEGAEDVRISGGGVIDGQGASWWRMYRDY 123
Query: 119 ------KFVVTKNE---IKNVMVSWNHTGACSGDE--CRPRLVGFLGCRNVNVWNVRLRE 167
+F + E +N +S +G + RP L+ R V + + LR
Sbjct: 124 REGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVVIEGIVLRN 183
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A+W HI+ D +IR +S + PN DG++++ S N I D GDD + K+
Sbjct: 184 SAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGDDCLGLKS 242
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 105/241 (43%), Gaps = 33/241 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V+D+GA D DT AIQ AID +V P G Y T I LK +V L + +
Sbjct: 20 NVLDYGAVADDDKLDTQAIQKAIDEVSEKGG-GKVVIPKGTYDTGAITLKDNVNLCLEDK 78
Query: 76 ATLLGGPRI---EDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK---- 119
T L + ++YP S W + A++A ++ +TG G +DGQA
Sbjct: 79 ETKLQFTQDINHDNYPLVYSHWEGQPMYNYSAFIYAKDAVNIALTGQGTLDGQAGDGTPW 138
Query: 120 -------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRL 165
+++ + +++ N+ G RP + +GC NV V V L
Sbjct: 139 CWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQVIGCENVLVEGVTL 198
Query: 166 REPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
W ++ V C N +R + I NNDGID E SN +I DTGDD I K
Sbjct: 199 LRSPMWEVNPVLCTNVTVRGIHI--STKAANNDGIDPESSNYVLIEDNYFDTGDDCIAIK 256
Query: 226 T 226
+
Sbjct: 257 S 257
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 46/285 (16%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ ++ DFG GDG+ +T A + A+ Q+ PPG +LT+ L S +TL
Sbjct: 55 VFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLF 114
Query: 72 IHEDATLLG---------GPRIEDY--------PEESSRWYVVLAENATDVGITG-GGVV 113
+ DA +L P + Y P SS ++ +N DV ITG G +
Sbjct: 115 LARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSS---LIHGQNLKDVVITGHNGTI 171
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+GQ + K++ N+T R LV + ++ + N+ LR+ +W L
Sbjct: 172 NGQGQTWWT-----KHLHKLLNYT--------RGPLVQIMYSSDIVISNITLRDSPFWTL 218
Query: 174 HIVRCDNTFIRDMSIYGD-FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
H C N I++++I ++ PN DGID + + +I I GDDAI K+
Sbjct: 219 HPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 278
Query: 227 --YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + +R+ SA I +GS + +NI +
Sbjct: 279 IAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILV 323
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ +FG GDG +T + AI + Q+ P G ++T + L S+ TL
Sbjct: 34 VMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNFTLF 93
Query: 72 IHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITGG-GVVDGQ 116
+ E A +LG P IE P +V + T+V ITG G +DGQ
Sbjct: 94 LEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTIDGQ 153
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R LV + N+ + N+ +W +H V
Sbjct: 154 GKMWW---------ELWWNRTL----EHTRGHLVELMNSNNILIANLTFCNAPFWTIHPV 200
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N ++DM+I PN DGID + S N I I++GDD + K+
Sbjct: 201 YCSNVVVKDMTILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKS 250
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 32/253 (12%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL-TATIRLKSHVTLNIHED 75
+ DFGA GD + A I C N ++ PPG YL I + +++++I +
Sbjct: 54 ITDFGAVGDSLSDSKPAFDKVIQICKEQN-GARIIVPPGVYLLRGPIHMVDNMSIDIQKG 112
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM------- 118
A L+ +DY P + W + A +V I G G +DG A
Sbjct: 113 AKLIFSNEAKDYLPTVLTSWEGTFLYNYSPFIYAYQVKNVAIIGEGTIDGNAKDSFNLWH 172
Query: 119 ------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ + K +NV + G G RP+ + F C+N+ + V + +WC
Sbjct: 173 GKQKQSQELSRKMNHENVPIEKRQFG--EGHFLRPQFIQFFECKNILIEGVTITNSPFWC 230
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTG 229
+H ++ +N R + + FN NNDG D E S N +I + + DD I K Y G
Sbjct: 231 VHFLKSENITARKVK-FDAFNK-NNDGFDPEYSKNVLIEDIDFNNADDNIAIKAGRDYEG 288
Query: 230 PLYNLTATDSWIR 242
LT+ + IR
Sbjct: 289 RRIGLTSENIIIR 301
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 50/291 (17%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
++ + T + +V DFGAKGDG+ DT IQ+AI +CP ++ V P G Y ++
Sbjct: 70 IMFCTDTQDYTLNVRDFGAKGDGVQDDTTYIQAAIMSCPRNSR---VLIPEGTYRVTSLF 126
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP--------EESSRWYVV-----LAENA-------- 102
LK H+T+ + + A L E + E+ Y++ A+N
Sbjct: 127 LKDHLTMELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGI 186
Query: 103 --TDVGITGGGVVDGQAM--KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNV 158
DV I G G +DG A + + E++ RPR++ C +V
Sbjct: 187 GIKDVTICGEGTIDGNASWENWWLDAKEVRGA--------------ARPRMIFLNRCEDV 232
Query: 159 NVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG 218
+ + ++ W +H C + +++ G +PN DG++ E ++ IT G
Sbjct: 233 TITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVG 292
Query: 219 DDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKAL 261
DD I K Y P N+ +R +I LGS K L
Sbjct: 293 DDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGSITLGSEMAAGIKNL 343
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 51/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGAKGDG+ +T +I AI A V P G +LT I LKS+V L++ D
Sbjct: 48 SIVSFGAKGDGVSMNTESINKAIAAVSQKGGGV-VLIPGGLWLTGPIELKSNVNLHLKRD 106
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A L Y W + + ++ ITG G++DG + + K +
Sbjct: 107 ALLQFTDDFNQYKLVEGNWEGQPAWRNQSPISGTDLQNIAITGSGIIDGNGGAWRMVKRD 166
Query: 127 IKNVMVSWNHTGACSG----------------------------------------DECR 146
K W G D R
Sbjct: 167 -KLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAAGQSAADLQSIKDFLR 225
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ C+ + + V + W LH + C++ +R++ + + N DG+D+E
Sbjct: 226 PNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGDGVDVESCK 285
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDD IC K+
Sbjct: 286 NVLIEGSTFDVGDDGICIKS 305
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 50/291 (17%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR 63
++ + T + +V DFGAKGDG+ DT IQ+AI +CP ++ V P G Y ++
Sbjct: 80 IMFCTDTQDYTLNVRDFGAKGDGVQDDTTYIQAAIMSCPRNSR---VLIPEGTYRVTSLF 136
Query: 64 LKSHVTLNIHEDATLLGGPRIEDYP--------EESSRWYVV-----LAENA-------- 102
LK H+T+ + + A L E + E+ Y++ A+N
Sbjct: 137 LKDHLTMELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGI 196
Query: 103 --TDVGITGGGVVDGQAM--KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNV 158
DV I G G +DG A + + E++ RPR++ C +V
Sbjct: 197 GIKDVTICGEGTIDGNASWENWWLDAKEVRGA--------------ARPRMIFLNRCEDV 242
Query: 159 NVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG 218
+ + ++ W +H C + +++ G +PN DG++ E ++ IT G
Sbjct: 243 TITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVG 302
Query: 219 DDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKAL 261
DD I K Y P N+ +R +I LGS K L
Sbjct: 303 DDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGSITLGSEMAAGIKNL 353
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+I +G G +T A + AID ++ P G +LT I LKS++ L++ E
Sbjct: 49 SIIQYGGVAGGSVKNTEAFRKAIDDLSKKGGG-KLVVPRGMWLTGPIELKSNINLHVEEG 107
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MKF 120
A ++ DYP + V A NAT++ ITG GV+DG K
Sbjct: 108 AFIIFSKDKNDYPLVDVSFEGLNTIRCQSPVSARNATNIAITGKGVIDGSGDAWRAIKKG 167
Query: 121 VVTKNEIKNVMVS--------------------------WNHTGACSGDEC-------RP 147
V+++E K + S +N S +E RP
Sbjct: 168 KVSESEWKEITASGGILSSDGKTWYPSESYKKGFESSSSFNVPDRISKEELKSVKDFLRP 227
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V +GC V + + W LH + C N ++++++ + + N DG+D+E N
Sbjct: 228 VMVSLVGCDKVLLDGPTFQNSPAWNLHPLMCSNVILKNLTVRNPWFSQNGDGVDLESCKN 287
Query: 208 TVITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 288 VLIYNNTFDVGDDAICIKS 306
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 44/283 (15%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+++ DFG GDG +T A + A++A Q+ PPG +LTA L SH+TL +
Sbjct: 78 YNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSHMTLFL 137
Query: 73 HEDATLLG---------GPRIEDYPEESSR-----WYVVLAENATDVGITG-GGVVDGQA 117
E A +LG P + Y R ++ +N DV ITG G ++GQ
Sbjct: 138 AEGAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGYNGSINGQG 197
Query: 118 MKFVVT--KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ + + +KN RP LV + ++ V N+ LR +W H
Sbjct: 198 EVWWLKHRRRMLKN---------------TRPPLVQLMWSSDIIVTNITLRNSPFWHFHP 242
Query: 176 VRCDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
C N + +++I + PN DGID + + +I I GDDAI K+
Sbjct: 243 YDCTNVTVSNVTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIA 302
Query: 227 YTGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
Y P N+ + +R+ SA I +GS + +N+ I
Sbjct: 303 YGRPSSNILIRNVAVRSLVSAGISIGSEMSGGVANVTVENVRI 345
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 119/277 (42%), Gaps = 47/277 (16%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSH 67
+++ + ++ DFGAKGDG D AAIQ+AI A P G ++ FP G Y T I LKSH
Sbjct: 74 TSSESALLNIRDFGAKGDGESMDAAAIQAAIAAAPKG---ARIVFPAGTYRTTPIFLKSH 130
Query: 68 VTLNIHEDATLLGGPRIEDYP---------EESSRWYVV------LAE---------NAT 103
+T+ + E ATLLG + YP +++ +Y + +AE
Sbjct: 131 ITIELMEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVE 190
Query: 104 DVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNV 163
DV I G G +DG W + RPR + L C ++ V +
Sbjct: 191 DVRIIGEGTLDGNGQNG------------DWWINCKVKREAWRPRSLYLLECHDILVEGI 238
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAIC 223
++ W +H +R ++++ ++PN DGID E N I V+ GDD I
Sbjct: 239 TIKNSPSWTVHPIRSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIA 298
Query: 224 --------PKTYTGPLYNLTATDSWIRTKSSAIKLGS 252
P P N+ + ++ A+ LGS
Sbjct: 299 IKSGKISIPLKERRPSENIIIRNCLMQYGHGAVVLGS 335
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query: 34 IQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEES 91
+Q+ ID+C V+ G Y L + LKS V LN+ E A L + D+ P
Sbjct: 63 LQAVIDSCSVAGGG-TVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDFLPVVL 121
Query: 92 SRWY---------VVLAENATDVGITGGGVVDGQA-MKFVV----------TKNEIKNVM 131
+RW ++ A +A ++ ITG G +D Q ++F E+ + +
Sbjct: 122 TRWEGTELYGHSPMIYAYHANNIAITGKGTIDAQGGLEFAAWSKIEANDRDRLREMGDKL 181
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
V + G RP + GC V + + +++ +W +H V CDN +R ++I D
Sbjct: 182 VPVHERIFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTI--D 239
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------YTG-PLYNLTATDSWIRT 243
+ PNNDG D E + N +I TGDDAI K+ Y G P N+ + +
Sbjct: 240 SHFPNNDGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHS 299
Query: 244 KSSAIKLGSASWFDFKALVFDNITI 268
+ + + +GS + +NI I
Sbjct: 300 ECNGLCIGSEMSGGASDVYMNNIEI 324
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ S+ DFG GDG +T + + AI Q+ P G +LT + L S+ TL
Sbjct: 74 VLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNFTLF 133
Query: 72 IHEDATLLGG------PRIEDYPE--------ESSRWYVVLAENATDVGITG-GGVVDGQ 116
+H A +L P IE P ++ ++V ITG G VDGQ
Sbjct: 134 LHHGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQ 193
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ + WN T + R L+ + NV + N+ R +W +H V
Sbjct: 194 GRMWW---------ELWWNRTL----EHTRGHLLELISSDNVLISNLTFRNSPFWTIHPV 240
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N ++ M+I N PN DGID + S N I I++GDD + K+
Sbjct: 241 YCSNVVVKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKS 290
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GDG + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 29 NLLDFGARGDGRTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 85
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y P +R+ +V A + +V ITG GV+DG A
Sbjct: 86 GTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPW 145
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V
Sbjct: 146 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEG 205
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 206 VKIINSPMWCIHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 263
Query: 223 CPKT 226
K+
Sbjct: 264 VIKS 267
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+V DFGA G TAAIQ AI G+ V P G +LT ++ LKS +TL++
Sbjct: 4 RNVCDFGADPSGRQVSTAAIQRAI--AKTGHNDTLV-IPAGRFLTGSLFLKSGMTLHLEA 60
Query: 75 DATLLGGPRIEDYPEESS-------RWYVVLAE--NATDVGITGGGVVDGQAM---KFVV 122
A LLG ++DYP + RW + N DV ITGGG +DGQ + +
Sbjct: 61 GAQLLGSQSLDDYPLIDTRVAGIDMRWPAAIINIINCHDVSITGGGTIDGQGLVWWQRFW 120
Query: 123 TKNEIKNVMVSWNHTG---ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+E ++ ++ G D RPR + + + + RE +W +H+
Sbjct: 121 GDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWNVHLCYSR 180
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+ + + I P+ DGIDI+ + R + DD IC K G
Sbjct: 181 HITLDSVQISNSAG-PSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRG 229
>gi|265752248|ref|ZP_06088041.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237040|gb|EEZ22510.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 515
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 38/289 (13%)
Query: 3 LLLLLSTTHIHIHS----------VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF 52
L + LS H+ + ++DFGA D + AI AI++C +V
Sbjct: 4 LYICLSVIHVFAQTREHGRTGEFNILDFGATRDTMMVHMKAINEAIESCYRQGGG-RVVI 62
Query: 53 PPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY-----------VVLAEN 101
PPG++ T TI LK +V L++ A L D+P + Y ++ A
Sbjct: 63 PPGKFKTGTIFLKDNVELHLDNGACLYASEDYADFPIQPRAAYRSLKDAGGWSALIYAVG 122
Query: 102 ATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGD-ECRPRLVGFLGCRNVNV 160
A ++ +TG GV+DG+ + GD + RPR + F+ C+ V +
Sbjct: 123 ARNIAVTGKGVIDGRGKGRKGRVGGV-------------PGDADGRPRNILFISCKGVRI 169
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
+ +R A W H + C++ + + ++ N NNDGIDI+ +++ ID+ DD
Sbjct: 170 SGISMRNSALWNQHYLDCEDVIVEHIHVFNHCNG-NNDGIDIDGCRRFILSDSVIDSDDD 228
Query: 221 AICPK-TYTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
I K T P ++ + + + ++AIK G+ S +K + N +
Sbjct: 229 GIVLKSTGLAPCEDVVINNCIVSSFANAIKCGTESTGGYKNIAISNCIV 277
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 35/240 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V FGA G TAA Q AID +V P G +LT +RLKS+V L++ +DA
Sbjct: 26 VTRFGADSGGKTDSTAAFQQAIDEAHQKGG-GRVTVPKGVFLTGALRLKSNVELHVTKDA 84
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
+ DY P +R+ ++ A A ++ ITGGG++DGQA
Sbjct: 85 VIRFSQNPADYLPAVLTRFEGVELYNYSPLIYAYEAENIAITGGGMLDGQADDRHWWPWK 144
Query: 118 -----------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ + + +NV V G +G RP + C+NV + V +
Sbjct: 145 RGTNGQPSQEKDRDALFEMAERNVPVEERRFG--TGHYLRPNFIQPYRCKNVFIQGVTVM 202
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C+N + + + G + PN DG+D E + +I D GDD I K+
Sbjct: 203 NSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNGDDCIAIKS 260
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT +I L SH+TL
Sbjct: 35 HSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHLTL 94
Query: 71 NIHEDATLLGG------------PRIEDYPEESSRWYVVL--AENATDVGITGG-GVVDG 115
+ + A +LG P E + Y L N DV ITG GV+DG
Sbjct: 95 FLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVIDG 154
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLH 174
Q + V WN + S + RP LV F + V V N+ L PAY +H
Sbjct: 155 QGL-------------VWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAY-NIH 200
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++ ++S+ +P GI + S++ I I TG DAI K+
Sbjct: 201 PVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKS 252
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT +I L SH+TL
Sbjct: 40 HSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHLTL 99
Query: 71 NIHEDATLLGG------------PRIEDYPEESSRWYVVL--AENATDVGITGG-GVVDG 115
+ + A +LG P E + Y L N DV ITG GV+DG
Sbjct: 100 FLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVIDG 159
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLH 174
Q + V WN + S + RP LV F + V V N+ L PAY +H
Sbjct: 160 QGL-------------VWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAY-NIH 205
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N ++ ++S+ +P GI + S++ I I TG DAI K+
Sbjct: 206 PVYCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKS 257
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP----GNKPCQVRFPPGEYLT 59
+ L H SV DFG GDG +TAA +SA+D G + P G++LT
Sbjct: 1 MYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLT 60
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENATDV 105
L SH TL +H+DA +LG + ++P + R+ ++ N TDV
Sbjct: 61 GPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDV 120
Query: 106 GITGG-GVVDGQAMKF--VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
ITG G +DGQ + KN++K R L+ + + + N
Sbjct: 121 VITGSNGTIDGQGAMWWSKFHKNQLKYT---------------RGYLIELMHSDTIYISN 165
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ L W +H V N ++ ++I N+PN DGI+ + ++ I I +GDD +
Sbjct: 166 LTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCV 225
Query: 223 CPKT 226
K+
Sbjct: 226 AIKS 229
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATI 62
L++ T ++ + GA GI T I I+ A G + FP G YLTATI
Sbjct: 11 LVIAVTAWSRTFNMKELGADPRGIESCTELINQTIEKASSEGGG--TIYFPAGVYLTATI 68
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGV 112
+KS++TL + A L R EDY P RW ++ A +A ++ ITG G
Sbjct: 69 HMKSNITLYVESGAVLRFSDRFEDYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITGRGT 128
Query: 113 VDGQAMKF---------VVTKNEIK----------------NVMVSWNHTGACSGDECRP 147
++G K+ ++ KN K ++ +S + + RP
Sbjct: 129 LNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRP 188
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG---DFNTPNNDGIDIED 204
+ F C NV + NV++ +W ++ CDN + ++IY D PN DGI+
Sbjct: 189 PFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSS 248
Query: 205 SNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
N I+ I GDD I K+ Y N+T T+ + + + +GS
Sbjct: 249 CRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGS 304
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 39 HSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGG-----VVDGQAMKFVVTKN 125
+ + A +LG ++ S W +V + GI G +++G + VV
Sbjct: 99 FVEKGAVILGS-------QDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTG 151
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCLHIVRCDN 180
+ + V W+ + S + RP LV F V V N+ L PAY +H V C N
Sbjct: 152 DNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAY-SIHPVYCSN 210
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTAT 237
++++S+ +P GI + SNN I +I+ G DAI K+ G Y+ T
Sbjct: 211 VVVQNISVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTT 270
Query: 238 DSWIR------TKSSAIKLGS 252
D +IR + S++ GS
Sbjct: 271 DVYIRRVYLQSSSGSSVAFGS 291
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATI 62
L++ T ++ + GA GI T I I+ A G + FP G YLTATI
Sbjct: 11 LVIAVTAWSRTFNMKELGADPRGIESCTELINQTIEKASSEGGG--TIYFPAGVYLTATI 68
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGV 112
+KS++TL + A L R EDY P RW ++ A +A ++ ITG G
Sbjct: 69 HMKSNITLYVESGAVLRFSDRFEDYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITGRGT 128
Query: 113 VDGQAMKF---------VVTKNEIK----------------NVMVSWNHTGACSGDECRP 147
++G K+ ++ KN K ++ +S + + RP
Sbjct: 129 LNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRP 188
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG---DFNTPNNDGIDIED 204
+ F C NV + NV++ +W ++ CDN + ++IY D PN DGI+
Sbjct: 189 PFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSS 248
Query: 205 SNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
N I+ I GDD I K+ Y N+T T+ + + + +GS
Sbjct: 249 CRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGS 304
>gi|408380148|ref|ZP_11177736.1| polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407745989|gb|EKF57517.1| polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 447
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 25/250 (10%)
Query: 33 AIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE--- 89
++Q A+D + + P G YL +RL S L + E A L P Y
Sbjct: 18 SLQQALDTA--ARQGLVLHVPRGVYLCGPLRLPSGTDLCLEEGAVLRFDPDYTRYASNTV 75
Query: 90 ----ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDEC 145
E S +++A++A + I G G ++ +V E + H
Sbjct: 76 DVIAEDSDRALIIAQDARSIRIHGAGTIEAPGEAYVEGLLEEMGTYIPSRH--------- 126
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RPR + C++V++ +++ A W +H++ D+ + +SI D PN DG+ ++
Sbjct: 127 RPRTLVIDRCKDVHIEGIKIGLSAMWTVHLIHSDDVVLEGISIINDRKMPNTDGVVVDAC 186
Query: 206 NNTVITRVQIDTGDDAICPKTYTG----PL---YNLTATDSWIRTKSSAIKLGSASWFDF 258
I IDT DD + KT G P+ + I ++S A+KLG+ S+ D
Sbjct: 187 RRVSIADCVIDTADDGVVLKTSRGGDGAPIGECREIRVRGCKIISESCALKLGTESFADM 246
Query: 259 KALVFDNITI 268
++F++ I
Sbjct: 247 TEILFEDCEI 256
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 49/296 (16%)
Query: 4 LLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATI 62
L++ T ++ + GA GI T I I+ A G + FP G YLTATI
Sbjct: 11 LVIAVTAWSRTFNMKELGADPRGIESCTELINQTIEKASSEGGG--TIYFPAGVYLTATI 68
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGV 112
+K+++TL + A L R EDY P RW ++ A +A ++ ITG G
Sbjct: 69 YMKNNITLYVESGAVLRFSDRFEDYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITGRGT 128
Query: 113 VDGQAMKFVVTKNEIKNVM-------------------------VSWNHTGACSGDECRP 147
+DG K+ + E + ++ +S + + RP
Sbjct: 129 LDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRP 188
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG---DFNTPNNDGIDIED 204
+ F C NV + NV++ +W ++ CDN + ++IY D PN DGI+
Sbjct: 189 PFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSS 248
Query: 205 SNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
N I+ I GDD I K+ Y N+T T+ + + + +GS
Sbjct: 249 CRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGS 304
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTRLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASENIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R++ + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNIGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTRLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASENIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R++ + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 106/240 (44%), Gaps = 37/240 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGAK D D AI++AIDAC +V P GE+LT I L+S+V L++ + A
Sbjct: 450 ITDFGAKPDADCTD--AIRAAIDACHQAGG-GRVVVPAGEWLTGAIHLRSNVNLHVAKGA 506
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVV-------------- 113
TL + YP +RW + A ++ ITG G +
Sbjct: 507 TLRWVFDLAKYPIVFTRWEGVECMNFSPFIYAWEQENIAITGEGTLDGGSDWSTWWGWND 566
Query: 114 --DGQAMKFVVTKNEI-----KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLR 166
DG A K +N + NV V+ GA D RP V C+N+ + V +
Sbjct: 567 KRDGTAPKQRAARNRLIQMGETNVPVAERVFGA--NDFLRPNFVQPYRCKNILIEGVSII 624
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W LH V N +R++ I + PNNDG D E + ++ DTGDD I K+
Sbjct: 625 RSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPESCRDILVEDTLFDTGDDCIAIKS 682
>gi|393781089|ref|ZP_10369290.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
gi|392677424|gb|EIY70841.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
Length = 441
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
++++++G D T IQS ID V P G YL+ ++ K L + E
Sbjct: 47 YNILEYGVINDSTLLQTEKIQSVIDQASQQGGGVIV-IPKGTYLSGSLFFKPKTHLYLEE 105
Query: 75 DATLLGGPRIEDYP------EESSRWYVVLAENATDVG---ITGGGVVDGQAMKFVVTKN 125
DA L G I ++P E S Y NA V I+G G ++G +++
Sbjct: 106 DAVLKGSDDISNFPIIDTRMEGQSLSYFAALVNADKVDGFTISGKGTINGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRL+ +V + V L +W H+ RC+ +
Sbjct: 161 -WKSFWLRRKVIPKCTNMDELRPRLLYISNSNDVQISGVSLINSPFWTTHLYRCNRVKLL 219
Query: 185 DMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P+ DGIDI+ +N ++ + DDAI K GP
Sbjct: 220 NLHIFSPATPVKAPSTDGIDIDVCSNVLVKNCYLSVNDDAIALKGGKGP 268
>gi|421078107|ref|ZP_15539066.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523692|gb|EIW46859.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 908
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 8 STTHI-HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKS 66
STT I I +++D+GA GDG+ +T AIQ+AIDAC PG K V P G + T I LK
Sbjct: 147 STTAIPKIFNIVDYGAVGDGVTSNTKAIQAAIDACTPGGK---VLIPAGIFKTGAIWLKG 203
Query: 67 HVTLNIHEDATLLGGPRIEDYP--------EESSRWYVVLAENATDVG------ITGGGV 112
+T I +D+TLL ++YP R+Y ++ + D G I G G
Sbjct: 204 DMTFEIGKDSTLLATENADEYPYHYLLYDYSTDERFYSLINAHTYDYGSIKNIRIVGEGT 263
Query: 113 VDGQAM-------------KFVVTKNEIKNVMVSWNHT------------GACSGDEC-- 145
+DG ++ KN K+ ++ NH A + ++
Sbjct: 264 IDGNGWIQDGFDKEDSSLPVYLPAKNSSKDNVLDPNHALNIGILAKTSIEKAMAMNKMNF 323
Query: 146 ------RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
RP ++ G NV PA L + C+N + + I ++ N DG
Sbjct: 324 KAVYPRRPSMITLRGVTNVYYGGFTAVNPANHTLINLNCNNVTVNGV-IMKTYDANNGDG 382
Query: 200 IDIEDSNNTVITRVQIDTGDD 220
I+ N + DTGDD
Sbjct: 383 IEFAHGNGLTVFNTFFDTGDD 403
>gi|383114421|ref|ZP_09935185.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
gi|313693872|gb|EFS30707.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
Length = 436
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ +D N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVVDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I D+P +R ++ L + ++G G VDG ++
Sbjct: 109 VLKGSDDISDFPVIETRMEGQNLKYFSALINVDKVNGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + + C+ DE RPRL+ NV V +VRL +W HI +CD+ + D+
Sbjct: 163 KSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLDL 222
Query: 187 SIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GDG + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 29 NLLDFGARGDGRTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 85
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y P +R+ +V A + +V ITG GV+DG A
Sbjct: 86 GTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPW 145
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V
Sbjct: 146 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEG 205
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 206 VKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 263
Query: 223 CPKT 226
K+
Sbjct: 264 VIKS 267
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTLNIH 73
SV FG GDG +TAA A+ + P ++ PPG +LT L S +TL +
Sbjct: 45 SVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTSRMTLFLA 104
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWYVVLAENA-TDVGITG-GGVVDGQAM 118
A + P IE P R+ ++ N DV ITG G +DGQ
Sbjct: 105 RGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTIDGQGS 164
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ + KN + + RP L+ + ++ V NV ++ +W +H V C
Sbjct: 165 AW---WDMWKNRTLLYT----------RPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYC 211
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR+++I ++PN DGID + S+N I I TGDD+I K+
Sbjct: 212 SNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKS 259
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GDG + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 27 NLLDFGARGDGRTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 83
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y P +R+ +V A + +V ITG GV+DG A
Sbjct: 84 GTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPW 143
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V
Sbjct: 144 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEG 203
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 204 VKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 261
Query: 223 CPKT 226
K+
Sbjct: 262 VIKS 265
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A +SAI Q+ P G++LT + L SH TL
Sbjct: 53 HSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDG 115
+H+DA LL I ++P ++ N TDV +TG G +DG
Sbjct: 113 YLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + N+ + N+ L + W +H
Sbjct: 173 QGSFW-------------WQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 220 VYSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 270
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY--- 87
T+ +Q AID C N V P G +++ + LKSHVTL++ +TL +D+
Sbjct: 46 TSVVQKAIDQCS-SNGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKSTGNPDDFVPA 104
Query: 88 ---PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTK-----NEIKNVMVSW---NH 136
R +++A + D+ ITG G +DGQ K +K +K+ VSW N
Sbjct: 105 FISQPTHPREALIIASHVQDIAITGPGTIDGQGQKSWWSKASDAREHLKHGDVSWFEKNW 164
Query: 137 TGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
G + RP L+ F + N+ + + W L + +N + SI+ ++P
Sbjct: 165 KGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPDSP 224
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N DGID+ S N + +++ TGDD I K+
Sbjct: 225 NTDGIDVVSSKNISLRHLKLSTGDDDIAIKS 255
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTQLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASEDIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R++ + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|399033014|ref|ZP_10732097.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068625|gb|EJL60035.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 442
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ DFG + D T AIQ ID N + P G +L+ + K L + E
Sbjct: 53 YTITDFGVRKDSTKIQTIAIQKVIDKAAK-NGGGVIIIPKGVFLSGALFFKPKTRLYVSE 111
Query: 75 DATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
TL G I +YP +SR +V A + I+G G ++G K+
Sbjct: 112 GGTLKGSDDIANYPIMASRMEGQNLDYFPALVNAYGVDNFSISGKGTINGNGYKYYEAFW 171
Query: 126 EIKNVMVSWNHTGACSGDEC-RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ + C+ E RPRLV NV +V+L +W H +C+N +
Sbjct: 172 ARRKI------NPKCTNLEVSRPRLVFVWNSNNVQFQDVKLINSGFWTNHFYKCNNVKLL 225
Query: 185 DMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
D+ I+ + P+ D ID++ +N ++ + DDAI K GP
Sbjct: 226 DLYIFSPHLEVKAPSTDAIDLDICSNVLVKGCFLSVNDDAIALKGGKGP 274
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWY---------VVLA 99
+V P G + T +RL+S V L++ A L P YP +RW + A
Sbjct: 34 RVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAVEARWEGAVGRVHSPCLYA 93
Query: 100 ENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVN 159
DV ITG G +DG + T + + RP L+G C V
Sbjct: 94 HGERDVAITGLGTIDGGGQTWWDTFRHRREELA-----------HPRPTLIGLHECERVT 142
Query: 160 VWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGD 219
+ +V LR W +H C++ + ++ I+ +PN DGID E N I+ ID GD
Sbjct: 143 IRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCHIDVGD 202
Query: 220 DAICPKTYTGPLYNLTATDSWIRTKSSAIK 249
D I K T + AT++ T + ++
Sbjct: 203 DCIALKAGTERTPDRVATENVTITGCTMVR 232
>gi|345012667|ref|YP_004815021.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039016|gb|AEM84741.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 510
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA-TIRLKSHVTLNI 72
+ SV+D+GAK DG D+AAI+ AI A VRFP G+Y + T+ LKS VT+ +
Sbjct: 39 VFSVMDYGAKADGSSNDSAAIEKAITAANSAGGGI-VRFPSGQYKSKNTVHLKSEVTIQL 97
Query: 73 HEDATLLGGP-----RIEDYPEESSRWY--------VVLAENATDVGITGGGVVDGQAMK 119
AT+LG + E P + + Y + + TD+G TG G +DG
Sbjct: 98 DSGATILGSSADTYDKAESNPNDDYQDYGHSHFHNAMFYGDKLTDIGFTGSGTIDGAG-- 155
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
N++ +G +++ C + + + LR ++ I C
Sbjct: 156 ---------NLITGNPDSGEAD------KIISLTRCDGLTLDGITLRRGGHFAALINGCK 200
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-----PLYNL 234
N ++I + DG +I + N +T I DDA+ K+ P ++
Sbjct: 201 NVTSDHLTID---TASDRDGWNIISTTNVTVTNANIAANDDALVFKSDYALGAKLPNGHV 257
Query: 235 TATDSWIRTK-SSAIKLGSASWFDFKALVFDNITI 268
TDS + K +A+ GS + DF VF ITI
Sbjct: 258 RVTDSHLSAKCCNALMFGSETCGDFTDYVFQGITI 292
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A ++AI Q+ PPG +LT + L SH+TL
Sbjct: 125 HSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTL 184
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
+ AT+LG R + P R ++ N +DV ITG G +D
Sbjct: 185 FLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYR-SLINGPNLSDVVITGNNGTID 243
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ V W + + S + RP +V F+ ++ + N+ W +H
Sbjct: 244 GQGS-------------VWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIH 290
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
V C N ++++++ Y +P G+ + S I I G DAI K+
Sbjct: 291 PVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIA 350
Query: 227 YTGPLYNLTATDSWIRTKS-SAIKLGS 252
Y P N+ W+++ S S + GS
Sbjct: 351 YGKPTRNVHIRRVWLQSSSGSGLAFGS 377
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTRLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASENIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R++ + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+VI +GA G T AIQSAID K +V P G +LT + LKSHV L++HE+
Sbjct: 55 NVIHYGADEKGEVLSTNAIQSAIDDAHR-LKGGRVVIPKGTFLTGALELKSHVELHLHEN 113
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------M 118
A + DY P +R+ ++ A +A ++ ITG G +DG+
Sbjct: 114 AYVTFSQDPRDYLPLVLTRYEGIELYNYSPLIYAHHAENMAITGSGTLDGRGDEHHWWPW 173
Query: 119 KFVVTKN-----------EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
K+ E+ + G R + C+N+ + V +++
Sbjct: 174 KYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYQCQNILIEGVTVKD 233
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C+N +R ++I G + PN DG++ E N +I D GDD I K+
Sbjct: 234 SPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKS 290
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ ++G GDG +T A ++AI + + PPG YLT + L SH+TL +
Sbjct: 42 SITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLA 101
Query: 74 EDATLLG------GPRIEDYPE-------ESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
+ A + P I+ P R+ + + DV ITG G +DGQ
Sbjct: 102 KGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGE 161
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + + RP L+ F + + + NV + +W +H V C
Sbjct: 162 -------------VWWNMWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYC 208
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
N I ++I ++PN DGID + S N I I TGDD + K+ Y P
Sbjct: 209 SNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRP 268
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+T + + I +GS + K +V ++IT+
Sbjct: 269 SSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEHITL 306
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTQLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASEDIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R++ + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ + +FGA GDG +TAA +SAI A ++ P G +LTA L SH+ L +
Sbjct: 102 VYDLREFGAVGDGRTVNTAAFESAIAAIAE-RGGGRLTVPAGRWLTAPFNLTSHMILFLA 160
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
A +LG P + P E Y ++ ++ DV ITG G ++GQ
Sbjct: 161 AGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQ 220
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ V + + ++ NHT R LV + ++ + N+ LR+ +W LH C
Sbjct: 221 SWWV---KFRRKLL--NHT--------RGPLVQLMRSSDIIISNITLRDSPFWTLHTYDC 267
Query: 179 DNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
N I + +I PN DGID + N VI I GDD I K+ Y
Sbjct: 268 KNVTISETTILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGR 327
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + IR+ SA + +GS ++ +N+ +
Sbjct: 328 PSANIVIQNVVIRSMVSAGVSIGSEMSGGVSDVLVENVHV 367
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ D+G GDG +T A ++AI + + PPG YLT + L SH+T +
Sbjct: 42 SITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTFYLA 101
Query: 74 EDATLLG------GPRIEDYPE-------ESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
+ A + P I+ P R+ + + DV ITG G +DGQ
Sbjct: 102 KGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGE 161
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + + RP L+ F + + + NV + +W +H V C
Sbjct: 162 -------------VWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYC 208
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGP 230
N I ++I ++PN DGID + S N I I TGDD + K+ Y P
Sbjct: 209 SNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRP 268
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N+T + + I +GS + K +V ++IT+
Sbjct: 269 SSNITIRRITGSSPFAGIAIGSETSGGIKNIVAEHITL 306
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 20 FGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
GA GI T I I+ A G + FP G YLTATI +KS++TL++ A +
Sbjct: 27 LGADAKGIKPCTKLINQTIEKAASEGGG--TIYFPAGTYLTATIHMKSNITLHLESGAIV 84
Query: 79 LGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
R EDY P ++RW ++ A +A ++ ITG G +DG +K+ + + E +
Sbjct: 85 RFSDRFEDYLPFVTARWEGTVMQTLSPLIYAHSADNLTITGRGTLDGNGLKWWLWEFETR 144
Query: 129 NVM-------------------------VSWNHTGACSGDECRPRLVGFLGCRNVNVWNV 163
V+ +S + + RP + F C N+ + NV
Sbjct: 145 KVIKENGGKLPSLDKLQQMWVDANNDLEISDYYKPSLERKMFRPPFIQFYECTNILIENV 204
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
++ +W ++ CDN I ++I + PN DGI+ N I+ I GDD
Sbjct: 205 KIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDD 264
Query: 221 AICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
I K+ Y N+T T+ + + + +GS K + N
Sbjct: 265 CITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRIAISN 317
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 49/294 (16%)
Query: 19 DFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDAT 77
GA GI T I I+ A G + FP G YLTATI +KS++TL++ A
Sbjct: 26 QLGADAKGIKPCTKLINQTIEKAASEGGG--TIYFPAGTYLTATIHMKSNITLHLESGAI 83
Query: 78 LLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
+ R EDY P ++RW ++ A +A ++ ITG G +DG +K+ + + E
Sbjct: 84 VRFSDRFEDYLPFVTARWEGTVMQTLSPLIYAHSADNLTITGRGTLDGNGLKWWLWEFET 143
Query: 128 KNVM-------------------------VSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V+ +S + + RP + F C N+ + N
Sbjct: 144 RKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYECTNILIEN 203
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGD 219
V++ +W ++ CDN I ++I + PN DGI+ N I+ I GD
Sbjct: 204 VKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGD 263
Query: 220 DAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
D I K+ Y N+T T+ + + + +GS K + N
Sbjct: 264 DCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRIAISN 317
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 107/259 (41%), Gaps = 26/259 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S DFG KGD T AIQ AID C V PG +L+ I LKS+VTL I +
Sbjct: 28 SPADFGGKGDDSTLATRAIQQAIDRCAQ-QGGGHVTLGPGVWLSGPIVLKSNVTLVIPDG 86
Query: 76 ATLLGGPRIEDY-------PEESSRWYVVLAENATDVGITGGGVVDGQ----------AM 118
TL P + P + + ++ LA V I GGG +DG A+
Sbjct: 87 VTLKATPDTAQFVDAFLGRPTQPNEAFI-LANGVRHVAIEGGGTIDGNGAQAWWPAAIAL 145
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ V + + +G RP LV + + N+RL W L +
Sbjct: 146 RNTVRSGHPEAFTAKYQGIPLANG-MPRPWLVEMNNVTSSEIHNIRLTNSPMWNLVLRNS 204
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP-----LYN 233
+ I +++ PN DGIDI S++ +I I TGDD I K+ N
Sbjct: 205 QHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIKSGISAGSGVKSEN 264
Query: 234 LTATDSWIRTKSSAIKLGS 252
+ DS +R + I LGS
Sbjct: 265 IAIQDSVMR-QGHGISLGS 282
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++ +GAK DGI +T +I AI C V P G +LT I LKS+V L++ ++
Sbjct: 47 NILKYGAKNDGITLNTKSINQAITDCNKRGGGVVV-IPEGLWLTGPIELKSNVNLHLKKN 105
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVD--GQAMKFV--- 121
A L ++ YP W + A N ++ ITG G+VD G+A + V
Sbjct: 106 ALLQFTKDMDQYPLVEGNWEGLPQMRNQSPIWASNQQNIAITGYGIVDGGGEAWRMVKKD 165
Query: 122 -VTKNEIKNVMV----------SW------------NHTGACSGDE-----------CRP 147
+T+++ K+++ SW + G + D+ RP
Sbjct: 166 KLTESQWKSLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDKDAAFYAEIKDFLRP 225
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ C+ V + V + W LH + ++ IR++ + N DG+DIE N
Sbjct: 226 NLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKN 285
Query: 208 TVITRVQIDTGDDAICPKT 226
++ D GDD IC K+
Sbjct: 286 VLVEGSTFDVGDDGICIKS 304
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 103/259 (39%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA G+G T A AIDA + P G + T I LKS++ L++ +
Sbjct: 51 NLADFGAVGNGEELCTEAFAKAIDALAEKGG-GHLIVPAGVWFTGPIVLKSNIDLHLEKG 109
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L P ++ YP + + V N +V ITG G +DG + K E
Sbjct: 110 AIILFSPNVDLYPLVETVFEGLDTRRCQSPVSGRNLENVAITGEGAIDGNGHYWRPLKRE 169
Query: 127 IKNVMVSWNHTGACSG--------------------------------DE-------CRP 147
K W T A G +E RP
Sbjct: 170 -KVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEEEWQSVRHFLRP 228
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V + C+NV + V + W LH + C+N I ++ + N DG+D+E N
Sbjct: 229 VMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKN 288
Query: 208 TVITRVQIDTGDDAICPKT 226
T+I D GDD IC K+
Sbjct: 289 TLIVNSTFDVGDDGICLKS 307
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVR--FPPGEYLT-ATIRLKSHVTLNIHEDA 76
GAK DG T A + I A K + R G +L I L V L+I E A
Sbjct: 50 LGAKTDG---KTDARPAMIKALRQARKWGRARIVLSGGVFLMCGPIHLVDGVCLDIREGA 106
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT--- 123
TL P Y P ++ W ++ N DV I G G++DG T
Sbjct: 107 TLRFSPEPRFYLPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGKGLIDGNCAATFATWRA 166
Query: 124 -KNEIKNVMVSWNHT-------GACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ E + + NH G RP+L+ GCRNV + V++ +WC+H+
Sbjct: 167 RQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINSPFWCIHL 226
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++ +N R + D NNDGID E S N +I V D GDD + K+
Sbjct: 227 LQSENVICRGLRY--DAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 275
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 24/240 (10%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKS 66
S ++ +++ GA+ +G + A AI K ++ P G Y L I L+S
Sbjct: 46 SPKNVQEINILKMGARNNGTYNCLPAFNKAIRRAS-AKKGVKIIVPKGTYYLCGPIVLRS 104
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENAT---------DVGITGGGVVDGQA 117
+V +++ E A L P + YP ++ W N + +V ITG G +DG A
Sbjct: 105 NVCIDLQEGAVLKFAPDAKYYPMVNTSWEGTFLYNHSPFIYGYQVENVAITGKGTIDGNA 164
Query: 118 MKFVVT----KNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLR 166
M T + + + NH G RP+L+ +N+ + V++
Sbjct: 165 MTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFGQGQWLRPQLIQLYQSKNITLEGVKII 224
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+WC+H+++ +N R + D NNDGID E S N +I + + GDD + K+
Sbjct: 225 NSPFWCIHLLKSENIICRRLRY--DAKLVNNDGIDPEMSRNILIEDIHFNNGDDNVAIKS 282
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 40/248 (16%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPP----GNKPCQVRFPPGEY 57
Q + L H SV DFG GDG +TAA +SA+D G + P G++
Sbjct: 39 QSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKW 98
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENAT 103
LT L SH TL +H+DA +LG + ++P + R+ ++ N T
Sbjct: 99 LTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLT 158
Query: 104 DVGITGG-GVVDGQAM----KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNV 158
DV ITG G +DGQ KF KN++K R L+ + +
Sbjct: 159 DVVITGSNGTIDGQGAMWWSKF--HKNQLK---------------YTRGYLIELMHSDTI 201
Query: 159 NVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG 218
+ N+ L W +H V N ++ ++I N+PN DGI+ + ++ I I +G
Sbjct: 202 YISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSG 261
Query: 219 DDAICPKT 226
DD + K+
Sbjct: 262 DDCVAIKS 269
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I D+G K D TAA+Q AID C V PG Y I LKS+V L+++
Sbjct: 54 IFQAADYGLKNDSTRLSTAALQKAIDECHRSGGGT-VEVAPGYYRIGAIYLKSNVNLHLN 112
Query: 74 EDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KF 120
+ TL+ I+ YPE SR W V+ +A + I+G G +D + K+
Sbjct: 113 QGTTLIASEDIDLYPEMRSRVAGIEMVWPSAVINILDAENAAISGAGTLDCRGKIFWDKY 172
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+ + + + W C R R + R + + + L +W ++ D
Sbjct: 173 WTMRKDYEKRKLRWIVDYDCK----RVRGMLISNSRQITLKDFTLMRTGFWGCQVLYSDQ 228
Query: 181 TFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + I + + P+ DGIDI+ S N +I ++D DD IC K
Sbjct: 229 CTLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLK 275
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 28/270 (10%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GAKGDGI DT AIQ+A+DA P V F PG Y T + +KS TL I TL
Sbjct: 35 YGAKGDGITLDTRAIQAALDAAAK-KGPATVTFAPGTYRTGALFVKSGTTLRIGAGVTLR 93
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
+ +YP +R W V+ DV ITG G VDG + + +
Sbjct: 94 AVHGLANYPLIKTRVAGIDMHWPAAVINVYRQHDVHITGSGTVDGNGKYWWDGYWALRKQ 153
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ W A D+ RPRL+ F ++V++ + L +W +HI + +
Sbjct: 154 YDLRGLRW----AADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHICYSAYVHVDGI 209
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTA 236
+I + P+ DG+DI+ S + ++ I DDA+C K P ++
Sbjct: 210 TIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVI 269
Query: 237 TDSWIRTKSSAIKLGSASWFDFKALVFDNI 266
+ +R ++A +GS + F+ + NI
Sbjct: 270 RNCTVRYGAAAFTIGSETSGGFRNVDVYNI 299
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLT-ATIRLKSHVTLNIHEDA 76
GAK DG T A + I A K ++ G +L I L V L+I E A
Sbjct: 62 LGAKTDG---KTDARPAMIKALRQARKWGGARIVLSGGVFLMCGPIHLVDGVCLDIREGA 118
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT--- 123
TL P Y P ++ W ++ N DV I G G++DG T
Sbjct: 119 TLRFSPEPRFYLPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGKGLIDGNCAATFATWRA 178
Query: 124 -KNEIKNVMVSWNHT-------GACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ E + + NH G RP+L+ GCRNV + V++ +WC+H+
Sbjct: 179 RQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINSPFWCIHL 238
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++ +N R + D NNDGID E S N +I V D GDD + K+
Sbjct: 239 LQSENVICRGLRY--DAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 287
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+ DA LL I ++P + R+ ++ N TDV +TGG G +DG
Sbjct: 113 YLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 173 QGAFW-------------WQQFHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I ++PN DGI+ + NT I I +GDD + K+
Sbjct: 220 VYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 270
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 41/267 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A ++AI Q+ PPG +LT + L SH+TL
Sbjct: 60 HSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTL 119
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG-GVVD 114
+ AT+LG R + P R ++ N +DV ITG G +D
Sbjct: 120 FLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYR-SLINGPNLSDVVITGNNGTID 178
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ V W + + S + RP +V F+ ++ + N+ W +H
Sbjct: 179 GQGS-------------VWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIH 225
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
V C N ++++++ Y +P G+ + S I I G DAI K+
Sbjct: 226 PVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIA 285
Query: 227 YTGPLYNLTATDSWIRTKS-SAIKLGS 252
Y P N+ W+++ S S + GS
Sbjct: 286 YGKPTRNVHIRRVWLQSSSGSGLAFGS 312
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 34/256 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDGI +T A ++AI Q+ P G +LT + L +H+TL
Sbjct: 105 HSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLTNHLTL 164
Query: 71 NIHEDATLLGGPR---------IEDYPEESSRW-YVVLAENATDVGITG-GGVVDGQAMK 119
+ AT++ + Y R+ ++ +N +DV ITG G +DGQ
Sbjct: 165 FLERGATIIASQDYSHWDIVDFLPSYGRGIGRYRSLIYGQNLSDVVITGDNGTIDGQGS- 223
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ W + S + RP L+ F+ +V + N+ + W +H V C
Sbjct: 224 ------------IWWKLFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCS 271
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPL 231
N I++++ P GI + S N I I TG DAI K+ Y P
Sbjct: 272 NVQIQNITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPT 331
Query: 232 YNLTATDSWIRTKSSA 247
N+ ++ ++++ S A
Sbjct: 332 SNVHISNVYLQSSSGA 347
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 108/254 (42%), Gaps = 33/254 (12%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDA---CPPGNKPCQVRFPPGEYLT 59
LL+L TT I V D+GA+ D T AIQ+AI+A CP G G YLT
Sbjct: 509 FLLILGTTRACICDVSDYGARDDNKSISTHAIQTAIEACSRCPEGGHVLLRPLDKGIYLT 568
Query: 60 ATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMK 119
++ LKS++ + LLG + + W + NA + ++ +++
Sbjct: 569 GSLFLKSNIIFEVTAGVRLLGTAN-----KSTVHWPQIYRRNAGVLELSRAALLNAGTCL 623
Query: 120 FVVTKNEIKNVMVSWNH------TGACSGD-----------------ECRPRLVGFLGCR 156
+ N+ + W+ TGA + D RP L+ +
Sbjct: 624 TFHSTNQTGDQCAEWSRYSNITITGAGTIDGNGFSGWYLPPYLNGSFTNRPMLIAPMWVD 683
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
+ + ++ L +PA+W + C N I D+ I + PN DG+D + N ++ R I
Sbjct: 684 GLYLSDLTLTDPAFWTVAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYIS 741
Query: 217 TGDDAICPKTYTGP 230
TGDD I K+ GP
Sbjct: 742 TGDDCIAIKSGRGP 755
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITGG-GVVDG 115
+ DA LL I ++P + R+ ++ N TDV +TGG G +DG
Sbjct: 113 YLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 173 QGAFW-------------WQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I ++PN DGI+ + NT I I +GDD + K+
Sbjct: 220 VYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKS 270
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A Q+A+ Q+ PPG +LT + L SH+TL
Sbjct: 39 HSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGG-----VVDGQAMKFVVTKN 125
+ +DA +L ++ S W V A + GI G +++G + VV
Sbjct: 99 FLEKDAVILAS-------QDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTG 151
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ + +V W+ + S + RP LV F+ NV V N+ + +H V C N
Sbjct: 152 DNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNL 211
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK--------TYTGPLYN 233
+I ++ +P GI + S N I I+ G DAI K +Y P N
Sbjct: 212 YIHRVTANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTAN 271
Query: 234 LTATDSWIRTKS-SAIKLGS 252
+ + ++ S S+I GS
Sbjct: 272 VQIKNVYLGAASGSSISFGS 291
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 102/250 (40%), Gaps = 50/250 (20%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGA GDG +T A + AI+ C +V P G +LT I LKS+V L+I E A
Sbjct: 53 VTDFGAIGDGKTKNTGAFKKAIEKCNV-EGGGRVVVPKGIFLTGAIYLKSNVDLHISEGA 111
Query: 77 TLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA---------- 117
T+L DYP +RW ++ A ++ ITG G +DG +
Sbjct: 112 TILFSQDSNDYPIVFTRWEGMECMNYSSLIYAHEEENIAITGKGTLDGNSDNDHWWFWCG 171
Query: 118 ---------------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCR 156
+++ K + + + G RP V +
Sbjct: 172 AKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFG-------DGYYLRPNFVQPYKSK 224
Query: 157 NVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQID 216
N + +V ++ W L+ V C+N I + + + PNNDG D E N I D
Sbjct: 225 NFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNVWIKDSYFD 282
Query: 217 TGDDAICPKT 226
TGDD I K+
Sbjct: 283 TGDDCIAIKS 292
>gi|238750651|ref|ZP_04612150.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
gi|238711041|gb|EEQ03260.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
Length = 594
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 58/296 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA DG +T AIQ AID+C PG C+V P G Y + + LKS +TLN+
Sbjct: 144 NIRDFGAIDDGKTLNTKAIQQAIDSCKPG---CRVDIPAGIYKSGALWLKSDMTLNLEAG 200
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAE------NATD-----------VGITGGGVVDGQAM 118
ATLLG +DYP + E NA D + ITG G++DG
Sbjct: 201 ATLLGSENPDDYPAGYRLYPYSTIERPASLINAIDPKNSQPGTFRNIRITGSGIIDGNGW 260
Query: 119 -----------------KFVVTKNEI--KNVMVSWNHTGACSGD---------ECRPRLV 150
++V +KN ++ +++ N + + R L+
Sbjct: 261 LRAKSAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSEGMDLKNAYGQRRSSLM 320
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
G N+ + +R PA+ + + N + I+ ++ N DGI+ +S N ++
Sbjct: 321 TLRGVENLYLAGFTVRNPAFHGIMNLENHNVVANGI-IHQTYDANNGDGIEFGNSQNVMV 379
Query: 211 TRVQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS--ASWFD 257
DTGDD I TG P+ +++ R A+ GS +W +
Sbjct: 380 FNNFFDTGDDCINFAAGTGEKAQQQEPMKGAWLFNNYFRMGHGAVVTGSHTGAWIE 435
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 44/278 (15%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+ A GDG +TA IQ AID C V P G +LT +RL S + L + E A L
Sbjct: 96 YHAVGDGKTLNTAVIQRAIDDCMDEE---AVYLPKGVFLTGALRLHSDMELYLEEGAVLQ 152
Query: 80 GGPRIEDY-PEESSRWYVVLAE-----------------NATDVGITGGGVV----DGQA 117
G ++EDY P SR+ + E N +V I G G + A
Sbjct: 153 GTDQVEDYLPRIWSRFEGIEQECYSSVLNLGSLEHQGDYNCRNVVIRGKGTIASGGRSLA 212
Query: 118 MKFVVTKNE-IKNVMVSW-NHTGACSGDE-----CRPRLVGFLGCRNVNVWNVRLREPAY 170
K + ++ E +K+ ++S C E RPRL+ C+N+ + ++L++ A
Sbjct: 213 EKVIASETEHLKDYLLSLGEQIRECEKPETIPGRVRPRLINMSNCQNITMSGLKLKDGAS 272
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
W +H++ D + + Y + N DG D + S N I +TGDD+I K+ P
Sbjct: 273 WNVHMIYSDGIVTNNCTFYSE-GIWNGDGWDPDSSTNCTIFGCTFNTGDDSIAIKSGKNP 331
Query: 231 LYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
N I S I++ FD K + ITI
Sbjct: 332 EGN------EISRPSEHIRI-----FDCKCAMGRGITI 358
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 38/232 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A + AI+ ++ Q+ PPG +LT + L H TL +H
Sbjct: 47 SIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHFTLYLH 106
Query: 74 EDATLLGGPRIEDYP-------------EESSRWYVVL-AENATDVGITG-GGVVDGQA- 117
++A +LG +ED+P R+ ++ N TDV ITG G +DGQ
Sbjct: 107 KEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDNGTIDGQGA 166
Query: 118 ---MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
KF K +KN R LV + +++ + N+ W LH
Sbjct: 167 IWWQKF--HKKILKNT---------------RGYLVELMYSKDIIISNLTFLNSPAWNLH 209
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I ++PN DGID + + I + +GDD + K+
Sbjct: 210 PVYSSNILIQYVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKS 261
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A +AI + Q+ PPG++LT + L SH TL
Sbjct: 53 HSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ +DA +LG ++P+ + R+ ++ N TDV ITG G +DG
Sbjct: 113 FLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + + + N+ L W +H
Sbjct: 173 QGSYW-------------WDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I ++I ++PN DGI+ + N I I +GDD I K+
Sbjct: 220 IYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKS 270
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI +AI G K V P G +LT I L+S+V L+
Sbjct: 53 NICDFGAKSDGVTLNTEAINNAIKVVHDKGGGK---VVIPEGLWLTGPIVLQSNVNLHAE 109
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 110 KNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 169
Query: 119 KFVVTKNEIKNVMVS-----------WNHTGAC--------SGDE--------------- 144
K +T + KN++ S + + GA SGD+
Sbjct: 170 KDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWEDMKSW 229
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + + + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 230 LRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVES 289
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 290 CKNVLIANCFFDAGDDAICLKS 311
>gi|288926400|ref|ZP_06420322.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae D17]
gi|288336853|gb|EFC75217.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae D17]
Length = 434
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G K D + T AIQ+ ID V P G + + + + L++ E
Sbjct: 45 YVITDYGVKADSMLVQTEAIQAVIDRAAAAGGGV-VMVPRGTFRSGALFFRPGTHLHLAE 103
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G RI +P E+ +++ L A+ ITG G +DG +
Sbjct: 104 GARLKGSDRIAHFPVLTTRFEGETCKYFAALVNADGVDGFTITGRGTIDGSGFYYW---- 159
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + D RPRLV C NV V +V L W H+ RCD+ D
Sbjct: 160 QEFWIRRQWN-PQCTNKDAQRPRLVYISNCSNVTVQDVHLVNSPVWTNHLYRCDHVRYLD 218
Query: 186 MSIY----GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATD 238
IY G P++D IDI+ ++ +I ++ DDA+ K G + +T+
Sbjct: 219 CHIYAPTNGPVKAPSSDAIDIDVCHDVLIRGCYMNVNDDAVVLKGGKGTFADRDSTN 275
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGAKGDG +T A A A V P G + T I LKS++ L++ + A
Sbjct: 50 ITDFGAKGDGQFKNTEAFHKAF-AKAFSQGGGTVVVPEGIWYTGPITLKSNINLHLKQGA 108
Query: 77 TLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
+L + +DYP + + + A A ++ ITG G++DG + K
Sbjct: 109 LILFSDQFDDYPLVETSYEGLKSARSTSPINALGAKNIAITGKGIIDGNGGAWRPVKKS- 167
Query: 128 KNVMVSWNHTGACSG-----------DEC------------------------RPRLVGF 152
K WN A G DE RP +V
Sbjct: 168 KMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSFLRPVMVSL 227
Query: 153 LGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITR 212
+ C N+ + + W +H + N +R++++ + N DG+D+E N ++
Sbjct: 228 VDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCENVLVYN 287
Query: 213 VQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 288 NTFDVGDDAICIKS 301
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
I +V DFGA GDG+ DTAAIQ+AI A P G++ V P G Y + LKSH+TL +
Sbjct: 79 ILNVKDFGAVGDGVTMDTAAIQAAIMAAPKGSR---VVIPAGTYKILPLFLKSHMTLELL 135
Query: 74 EDATLLGGPRIEDYP--------EESSRWY--------------VVLAENATDVGITGGG 111
E ATLL +DYP E+ S Y ++ DV I G G
Sbjct: 136 EGATLLAHTDRKDYPILPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRIIGQG 195
Query: 112 VVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DG W RPR + + C +V V + ++ W
Sbjct: 196 TIDGNGQN------------ADWWVDCKVKRGAWRPRSLYLVDCEDVVVEGITIKNSPSW 243
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+H VR ++++ ++PN DGID E N I V+ GDD I K+
Sbjct: 244 TVHPVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKS 298
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 103/259 (39%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA G+G TAA AIDA + P G + T I LKS++ L++ +
Sbjct: 51 NLADFGAVGNGEELCTAAFAKAIDALAEKGGG-HLIVPAGVWFTGPIVLKSNIDLHLEKG 109
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L P ++ YP + + V N +V ITG G +DG + K E
Sbjct: 110 AVILFSPDVDLYPLVETVFEGLDTRRCQSPVSGRNLENVAITGEGAIDGNGHYWRPLKRE 169
Query: 127 IKNVMVSWNHTGACSG--------------------------------DE-------CRP 147
K W T A G +E RP
Sbjct: 170 -KVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRP 228
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V + C+NV + V + W LH + C+N I ++ + N DG+D+E N
Sbjct: 229 VMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKN 288
Query: 208 TVITRVQIDTGDDAICPKT 226
+I D GDD IC K+
Sbjct: 289 ALIVNSTFDVGDDGICLKS 307
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI +AI G K V P G +LT I L+S+V L+
Sbjct: 59 NICDFGAKSDGVTLNTEAINNAIKVVHDKGGGK---VVIPEGLWLTGPIVLQSNVNLHAE 115
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 116 KNALIVFSSDTSLYPIITTSFEGLDAKRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 175
Query: 119 KFVVTKNEIKNVMVS-----------WNHTGAC--------SGDE--------------- 144
K +T + KN++ S + + GA SGD+
Sbjct: 176 KDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWEDMKSW 235
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + + + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 236 LRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVES 295
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 CKNVLIANCFFDAGDDAICLKS 317
>gi|271501832|ref|YP_003334858.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
gi|270345387|gb|ACZ78152.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
Length = 444
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 25/263 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
+ DGI DTA Q A+ D G V G YL +R+ S+ L + E A L
Sbjct: 8 YQPAADGITPDTARFQQALNDLDIQGGGTLVVE--SGRYLLGGLRIPSNCCLQLDEGAEL 65
Query: 79 LGGPRIEDYPE-------ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
+ +D+ E S + A ++ + G G + G A + + + +
Sbjct: 66 IASACYDDFAHTTTLSVAELSDRAFLYARQQRNITLCGKGKITGSADAYFSAQPDEQGYR 125
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
+ H RPR+V C + + ++ + W +H+V C + +++ D
Sbjct: 126 LPAQH---------RPRIVVLEDCEQITIQDITIEHAPMWTIHLVSCRQVNVERLTVDND 176
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP------LYNLTATDSWIRTKS 245
N D ++++ + ++ + DDA+C KT P ++ + +R++S
Sbjct: 177 MTMANTDALNLDSCQDVIVHDCHLSAADDALCIKTTAKPPAMQYKAQRMSVSHCRLRSRS 236
Query: 246 SAIKLGSASWFDFKALVFDNITI 268
A+K+G+ ++ D + L + T+
Sbjct: 237 CALKIGTETFADIEDLNVSHCTL 259
>gi|326797921|ref|YP_004315740.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548685|gb|ADZ77070.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 448
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D G K D T +IQ ID N + P G +LT ++ K L + E A
Sbjct: 58 ITDHGVKTDSTLVQTESIQKIIDKASE-NGGGVIVIPKGAFLTGSLFFKPKTHLYLDEGA 116
Query: 77 TLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
TL I D+ +S +++ L A+ I+G G+++G +++ +
Sbjct: 117 TLKCSDNIADFKVLTTRVEGQSLKYFAALINADGLDGFTISGKGIINGNGLRYW----QA 172
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ WN C+ DE RPRL+ +NV V V+L +W H +C+N I +
Sbjct: 173 FWLRREWNP--KCTNMDEQRPRLLYISNSKNVQVSGVQLLNSPFWTSHYYKCENLKILGV 230
Query: 187 SIYGDFN------TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I N P++DGID++ N +I I DD IC K GP
Sbjct: 231 RILAGSNNGSEVRAPSSDGIDLDVCQNVLIKNCYISVNDDGICLKGGKGP 280
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 35/268 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA+ D + AI +AI A ++ P GE+ T I LKS++ +++ E A
Sbjct: 54 ITDFGAEEDDQQATSQAIVTAISAAVEAGG-GRIVIPAGEWPTGKIHLKSNINIHLEEGA 112
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
TLL +DY P + W ++ A + ++ ITG G + + + V +
Sbjct: 113 TLLFSEDPKDYLPAVKTTWEGMECFNYSPLIYAFDCENIAITGKGELKAKMNTWKVWFSR 172
Query: 127 IKNVMVSWNHTGACSGDEC--------------RPRLVGFLGCRNVNVWNVRLREPAYWC 172
K M S + + RP+ + F C V + V++ +W
Sbjct: 173 PKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVKITNSPFWV 232
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + IRD+ ++ + NNDG+D E S N +I D GDDAI K+
Sbjct: 233 IHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIENCIFDQGDDAIAVKSGRNQDA 290
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ +S ++ + +GS
Sbjct: 291 WRLNMPTKNIVIRNSLVKNGHQLLAIGS 318
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+A+ ++ P G++LT + L SH+TL
Sbjct: 38 HSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTL 97
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITG-GGVVD 114
+ AT++ R D P R ++ +N +DV ITG ++D
Sbjct: 98 FLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYR-SLIYGQNLSDVVITGDNAIID 156
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ V W+ G S + RP ++ +G N+ + N+ W +H
Sbjct: 157 GQGS-------------VWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIH 203
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N I+ ++++ P GI + S + I I TG DAI K+
Sbjct: 204 PVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKS 255
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 31 TAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPE 89
T ++Q+ ID A G +V PG + T ++RL+SHV L++ A L P YP
Sbjct: 26 TESLQARIDEAAARGGG--RVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYPP 83
Query: 90 ESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGAC 140
+RW + A +A V ITG GV+DG + W A
Sbjct: 84 VEARWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGGGPW-------------WEAFRAG 130
Query: 141 SGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
+ RP LVG C +V + +V LR W +H + CD+ +RD++I ++PN DGI
Sbjct: 131 TLAHPRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGI 190
Query: 201 DIEDSNNTVITRVQIDTGDDAICPKTYT 228
D E N I+ ID GDD I K T
Sbjct: 191 DPESCRNVRISGCHIDVGDDCIALKAGT 218
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLT-ATIRLKSHVTLNIHEDA 76
GAK DG T A + I A K ++ G +L I L V L+I E A
Sbjct: 50 LGAKTDG---KTDARPAMIKALRQARKWGGARIVLSGGVFLMCGPIHLVDGVCLDIREGA 106
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVT--- 123
TL P Y P ++ W ++ N DV I G G++DG T
Sbjct: 107 TLRFSPEPRFYLPTVATSWEGTFLNNYSPMIYGRNLHDVSIVGKGLIDGNCAATFATWRA 166
Query: 124 -KNEIKNVMVSWNHT-------GACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ E + + NH G RP+L+ GCRNV + V++ +WC+H+
Sbjct: 167 RQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINSPFWCIHL 226
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
++ +N R + D NNDGID E S N +I V D GDD + K+
Sbjct: 227 LQSENVICRGLRY--DAKLVNNDGIDPESSRNVLIEDVSFDNGDDNVAIKS 275
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 97/229 (42%), Gaps = 20/229 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
I S FGA D T AIQ AID C V PG YL + +KS V L +
Sbjct: 55 RIISANSFGAVADSTRLSTEAIQKAIDECSAAGGGT-VILAPGYYLVGALFIKSGVNLQL 113
Query: 73 HEDATLLGGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAMKFV-- 121
+ TLL I +YPE SR W V+ +V I+G G++D + KF
Sbjct: 114 DKGVTLLASTDINNYPEFRSRIAGIEMIWPSAVLNVIKQKNVAISGEGMIDCRGKKFWDQ 173
Query: 122 --VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ E + + W A D R R + +V + + L +W I+ D
Sbjct: 174 YWSMRREYEKKGLRW----AVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWACQILYSD 229
Query: 180 NTFIRDMSIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
I ++I + P+ DG+DI+ S N +I ID DD IC K+
Sbjct: 230 YCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKS 278
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 2 QLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP----CQVRFPPGEY 57
Q + L H S+ DFG GDG +TAA +SA+D + + P G++
Sbjct: 48 QSMYLAPACRAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKW 107
Query: 58 LTATIRLKSHVTLNIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENAT 103
LT L SH TL +H DA +L I ++P + R+ +V N T
Sbjct: 108 LTGPFNLTSHFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLT 167
Query: 104 DVGITGG-GVVDGQAMKF--VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
DV ITG G +DGQ + KN++K R L+ + + +
Sbjct: 168 DVVITGNNGTIDGQGAMWWSKFHKNQLKYT---------------RGYLIELMHSDTIYI 212
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
N+ L W +H V N ++ ++I N+PN DGI+ + ++ I I +GDD
Sbjct: 213 SNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDD 272
Query: 221 AICPKT 226
+ K+
Sbjct: 273 CVAIKS 278
>gi|325300092|ref|YP_004260009.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319645|gb|ADY37536.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 444
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G D T IQ+ ID V P G YL+ ++ K + L I +
Sbjct: 52 YRITDYGVVNDSTVIQTERIQAVIDKASQAGGGV-VYIPQGTYLSGSLFFKPNTHLYIEK 110
Query: 75 DATLLGGPRIEDYPEESSRW------YVVLAENATDVG---ITGGGVVDGQAMKFVVTKN 125
TL G I ++ +R Y NA V I+G G ++G +++
Sbjct: 111 GGTLKGSDDISNFKVIDTRMEGQNLKYFAALVNAIGVDGFTISGEGRINGNGLRY----- 165
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ +E RPRLV ++V + VRL +W H+ RC+N +
Sbjct: 166 -WKSFWLRRQVNPKCTNLEELRPRLVYIADSKDVQLSGVRLENSPFWTTHLYRCENVKLL 224
Query: 185 DMSIYGDF---NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++SI+ + P++D IDI+ N ++ + DDAI K GP
Sbjct: 225 NLSIFAPYAPVKAPSSDAIDIDVCTNVLVKGCYMSVNDDAIALKGGKGP 273
>gi|312131040|ref|YP_003998380.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311907586|gb|ADQ18027.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 477
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 52/244 (21%)
Query: 5 LLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL 64
LL+ + ++ +V DFGAKGDG+H D+ AIQSAIDA G V FP G YL+ ++RL
Sbjct: 4 LLILSVYVQSFNVKDFGAKGDGLHLDSPAIQSAIDAAIEGG---TVYFPAGTYLSYSLRL 60
Query: 65 KSHVTLNIHEDATLLGGPRIEDYPEES-------------------SRWY--VVLAENAT 103
KS++ L+ A LL YPE+ S W ++
Sbjct: 61 KSNIQLDFAPGAILLAA-----YPEKDKGYDAAEPNPHNAYQDFGHSHWKNSLIWGIGLE 115
Query: 104 DVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNV 163
+V ITG G +DG+ + T+ E + V + + CRNV + ++
Sbjct: 116 NVSITGFGKIDGRGL----TREESRIPGVG-------------NKAIALKLCRNVTIRDI 158
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG-DDAI 222
+ ++ L D+ I+++ + N DG DI+ N I+ +++ DDAI
Sbjct: 159 SIVNGGHFALLATGVDHLVIQNVKV-----DTNRDGFDIDACRNVRISDCTVNSPWDDAI 213
Query: 223 CPKT 226
K+
Sbjct: 214 VLKS 217
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++DFGA GDG+ ++ A AID +V P G +LT I +KS++ L++ +
Sbjct: 64 SIVDFGAVGDGVTDNSEAFAKAIDYVSEKGG-GRVIVPRGIWLTGPIIMKSNIDLHVQQG 122
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKF 120
A + P EDYP + + + A N ++ TG G+ DG K
Sbjct: 123 AVVRFSPDFEDYPLIETIFEGLNTFRCMSPIHAHNLENIAFTGKGIFDGNGDAWRPVKKS 182
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSGDE---------------------CRPR 148
+T+++ K ++ S + + +GD RP
Sbjct: 183 KLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERKEDFEKIKDFLRPV 242
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
+V C+ V + + W +H + C++ IR++++ + + N DG+D+E N
Sbjct: 243 MVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDGLDLESCKNV 302
Query: 209 VITRVQIDTGDDAICPKT 226
VI D GDDAIC K+
Sbjct: 303 VIYNNSFDVGDDAICFKS 320
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 35/244 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFGA DGI +T A + AI + P G YLT I LK ++ +++ +
Sbjct: 71 SLTDFGAVPDGITLNTEAFRKAISKLTKLGG-GHLIVPAGIYLTGPISLKDNIDIHLERN 129
Query: 76 ATLLGGPRIEDYPEESSRWYV------VLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
A +L P +D+ + + + A T++ ITG G +DG + K +K
Sbjct: 130 ALILFSPNKKDFLKATDNEPQPKVVSGITASKRTNISITGEGTIDGNGQWWRPVK-RVKM 188
Query: 130 VMVSWNHTGACSG---------------------------DECRPRLVGFLGCRNVNVWN 162
V WN A G ++ R L+ C NV +
Sbjct: 189 SDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMRAHLIRITECNNVLIQG 248
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V ++ + + RC+N + +++ +N N DGID+ + +N +I D GDDAI
Sbjct: 249 VTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCSNVLIVNSTFDVGDDAI 308
Query: 223 CPKT 226
C K+
Sbjct: 309 CMKS 312
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFGA GDG +T A SAI + Q+ PPG++LT + L SH TL
Sbjct: 53 HNAVLTDFGAVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTL 112
Query: 71 NIHEDATLLGGPRIEDYPEES-------------SRWY-VVLAENATDVGITGG-GVVDG 115
+ + A +L ++P+ S R+ ++ N TDV ITG G +DG
Sbjct: 113 FLQKGAVILASQDESEWPKLSFLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + + + N+ L W +H
Sbjct: 173 QGSTW-------------WDKFQKKQLKITRPYMIEIMYSDQIQISNLTLINSPNWFVHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ N I ++I + PN DGID + N +I I +GDD I K+
Sbjct: 220 IYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVLIEDNYIVSGDDCIAIKS 270
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V DFGAK DG H +T A +AI AC +V G+YL+ I L S++ L++ E A
Sbjct: 90 VRDFGAKADGKHNNTQAFAAAIKACH-DAGGGKVVVAGGDYLSGPIHLLSNINLHVAEGA 148
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
+L Y P +RW ++ A T++ ITG GV+DGQA
Sbjct: 149 RILFITDPSAYLPAVFTRWEGMELMGYSPLIYAYGQTNIAITGKGVLDGQANRTTWWPWK 208
Query: 118 -----------MKFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVN 159
M V T++ ++ ++ G G RP + C+NV
Sbjct: 209 GGAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRPPFIQPYACKNVL 268
Query: 160 VWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGD 219
+ V + +W L+ V C+N + ++ + PN+DG D E N VI DTGD
Sbjct: 269 IEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPESCKNVVIKNCLFDTGD 326
Query: 220 DAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
D I K+ P N+ + +R + +GS
Sbjct: 327 DCIAIKSGRNADGRRLNTPTENIVISHCKMREGHGGVVIGS 367
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ +GA G+ +T AI+ AI V+ P G +LT I LKS++ L++ +
Sbjct: 60 SIEKYGAVAGGLEKNTQAIEKAISEVSKKGGGT-VKIPRGIWLTGPITLKSNINLHLEDG 118
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKF 120
A LL EDYP + + + A N ++ ITG GV+DG K
Sbjct: 119 ALLLFSKNFEDYPLTDTSFEGLNTMRCISPINAMNVENIAITGKGVIDGNGDAWRPVKKG 178
Query: 121 VVTKNEIKNVMVS----------WNHTGACSG-----------------------DECRP 147
+T + N++ S W T + D RP
Sbjct: 179 KMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPNLTKKEDLESVKDFLRP 238
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V + C V + + W +H + +N IR++ + + + N DG+D+E N
Sbjct: 239 VMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLESCKN 298
Query: 208 TVITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 299 VLIYNNTFDVGDDAICIKS 317
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 27/235 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ + GA+GDG +T IQ ID C V P G +++ + LK V L + E
Sbjct: 31 YNIAEQGAQGDGKTLNTQKIQLVIDGCAQKGGGTVV-IPKGVFVSGALFLKRGVNLELQE 89
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKF---VV 122
A L G I+DYP+ ++R W V L ++ V ITG G++DG F
Sbjct: 90 GAVLKGSTNIDDYPKLNTRIEGHFEPWRVALINGDSLEHVRITGSGILDGSGEPFWKEFY 149
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
+ + N + N RPRL ++V + + +W LH+ C +
Sbjct: 150 ARRDADNKTTNLNVE--------RPRLTFIQHSKDVLISGITFLNSGFWNLHLYACQDVT 201
Query: 183 IRDMSIYGD------FNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL 231
+ + P++DGID++ S I GDD I K GP
Sbjct: 202 VDYCRFHAPSGPKPYHQAPSSDGIDVDCSQRIFIRHSFFSVGDDCIALKGSKGPF 256
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLNIHEDAT 77
+GA GDG TAA + AI+A NK +V PPG Y+T I LKS+V L++ + AT
Sbjct: 54 YGAAGDGKSDSTAAFKKAIEAA---NKAGGGRVVVPPGIYVTGAIYLKSNVNLHVMKKAT 110
Query: 78 LLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA---------- 117
+ + Y P +RW ++ A N ++ ITG G +DGQ
Sbjct: 111 IKFSQNPDKYLPAVLTRWEGVELYNYSPLIYAYNEKNIAITGEGTLDGQGDNEHWWPWKG 170
Query: 118 -MKFVVTKNE------------IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR 164
+F + E + V G RP + +N+ + V
Sbjct: 171 KKEFGWKEGEPNQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVT 230
Query: 165 LREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICP 224
+ W ++ V +N I D+ I G + PNNDG+D E S N +I D GDD I
Sbjct: 231 ILNSPMWQINPVLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSYFDNGDDCIAI 288
Query: 225 KT 226
K+
Sbjct: 289 KS 290
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
IHI D+ A GDGI DTAAI +AI + PP + V FP GEYL + LKS V L
Sbjct: 80 IHIK---DYNAAGDGIRNDTAAIHAAIYSAPPRSV---VIFPRGEYLVEHLFLKSGVDLY 133
Query: 72 IHEDATLLGGP------------RIEDYPEE--SSRWY---------VVLAENATDVGIT 108
+ E A L P + DY + ++ W ++ ++ V I
Sbjct: 134 LEEGAVLRQNPNRDALAIVKGYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQVRIY 193
Query: 109 GGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREP 168
G G ++G M+ W + RPR V + C ++ V + +
Sbjct: 194 GDGTLNGSGMEG------------GWWNEPKKKNRAYRPRNVSLVNCSDITVCGLTSQNS 241
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
A W +H + N ++I D ++PN DG++ E N I + GDD I K+
Sbjct: 242 AAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKS 299
>gi|224538847|ref|ZP_03679386.1| hypothetical protein BACCELL_03743, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224519522|gb|EEF88627.1| hypothetical protein BACCELL_03743 [Bacteroides cellulosilyticus
DSM 14838]
Length = 436
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D G D T IQ+ ID + P G YL+ + K L + E
Sbjct: 51 YKITDHGVVNDSTLLQTEKIQAVIDQASSKGGGVII-IPKGTYLSGALFFKPKTHLYLEE 109
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G I ++P +S +++ L A+ I+G G ++G +++
Sbjct: 110 GAVLKGSDDISNFPIINTRIEGQSLKYFAALVNADKVDGFTISGKGTINGNGLRY----- 164
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRLV +V + VRL +W HI +C+N +
Sbjct: 165 -WKSFWLRRTVIPKCTNMDELRPRLVHISNSNDVQLSGVRLINSPFWTTHIYKCNNVKLL 223
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+ I+ P+ D IDI+ NN ++ + DDAI K GP
Sbjct: 224 GLYIFSPAAPVKAPSTDAIDIDVCNNVLVKNCYLSVNDDAIALKGGKGP 272
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI AI G K V P G +LT I L+S+V L+
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHDKGGGK---VIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 175
Query: 119 KFVVTKNEIKNVMVS----------W-----------------NHTGACSGDE------- 144
K +T + KN++ S W N + +E
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSW 235
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + V + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 236 LRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVES 295
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 CKNVLIANCFFDAGDDAICLKS 317
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI AI G K V P G +LT I L+S+V L+
Sbjct: 53 NICDFGAKSDGVTLNTEAINKAIKVVHDKGGGK---VIIPEGLWLTGPIVLQSNVNLHAE 109
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 110 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 169
Query: 119 KFVVTKNEIKNVMVS----------W-----------------NHTGACSGDE------- 144
K +T + KN++ S W N + +E
Sbjct: 170 KDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSW 229
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + V + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 230 LRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVES 289
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 290 CKNVLIANCFFDAGDDAICLKS 311
>gi|402308010|ref|ZP_10827025.1| polygalacturonase [Prevotella sp. MSX73]
gi|400377091|gb|EJP29972.1| polygalacturonase [Prevotella sp. MSX73]
Length = 441
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 21/238 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ + D+G K D + T AIQ+ ID A G V P G + + + + L++
Sbjct: 52 YVITDYGVKADSMLVQTEAIQAVIDRAAADGGGVVMV--PRGTFRSGALFFRPGTHLHLA 109
Query: 74 EDATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTK 124
E A L G RI +P E+ +++ L A+ ITG G +DG +
Sbjct: 110 EGARLKGSDRIAHFPVLTTRFEGETCKYFAALVNADGVDGFTITGRGTIDGSGFYYW--- 166
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ + WN + D RPRLV C NV V +V L W H+ RCD+
Sbjct: 167 -QEFWIRRQWN-PKCTNKDAQRPRLVYISNCSNVTVQDVHLVNSPVWTNHLYRCDHVRYL 224
Query: 185 DMSIY----GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATD 238
D IY G P++D IDI+ ++ +I ++ DDA+ K G + +T+
Sbjct: 225 DCHIYAPTNGPVKAPSSDAIDIDVCHDVLIRGCYMNVNDDAVVLKGGKGTFADRDSTN 282
>gi|423222160|ref|ZP_17208630.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392643384|gb|EIY37135.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 432
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D G D T IQ+ ID + P G YL+ + K L + E
Sbjct: 47 YKITDHGVVNDSTLLQTEKIQAVIDQASSKGGGVII-IPKGTYLSGALFFKPKTHLYLEE 105
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G I ++P +S +++ L A+ I+G G ++G +++
Sbjct: 106 GAVLKGSDDISNFPIINTRIEGQSLKYFAALVNADKVDGFTISGKGTINGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRLV +V + VRL +W HI +C+N +
Sbjct: 161 -WKSFWLRRTVIPKCTNMDELRPRLVHISNSNDVQLSGVRLINSPFWTTHIYKCNNVKLL 219
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+ I+ P+ D IDI+ NN ++ + DDAI K GP
Sbjct: 220 GLYIFSPAAPVKAPSTDAIDIDVCNNVLVKNCYLSVNDDAIALKGGKGP 268
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 129/315 (40%), Gaps = 55/315 (17%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L L + T +H V + GAK +G +T I + ID N + FP G YL
Sbjct: 1 MAFLCLCAATVLHAERVDMLKIGAKANGKVLNTKLINTTIDRLNR-NGGGTLFFPAGTYL 59
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +IRLKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 60 TGSIRLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 119
Query: 109 GGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDE------------------------ 144
G G +DGQ K+ + E VM+ G ++
Sbjct: 120 GEGTLDGQGKKWWM---EFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVS 176
Query: 145 ------CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNND 198
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN D
Sbjct: 177 TLQRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTD 235
Query: 199 GIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKL 250
GI+ E N I+ I GDD I K+ P N+T T+ + + + +
Sbjct: 236 GINPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVI 295
Query: 251 GSASWFDFKALVFDN 265
GS + + N
Sbjct: 296 GSEMSGSVRKVTISN 310
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ FGAKGDG+ +T AI AI +V P G +LT I L S+V L +
Sbjct: 60 NISKFGAKGDGMTLNTKAINDAIKEVNQ-RGGGKVIIPEGTWLTGPIELLSNVNLYTERN 118
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITG----------------- 109
A +L E YP E + A NA ++ ITG
Sbjct: 119 ALILFTGDFEAYPIIPTSFEGLETRRCQSPISARNAENIAITGYGIFDGNGDCWRPVKKE 178
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CR 146
GGV+D Q + T +K M +N + DE R
Sbjct: 179 KLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWNEIRAWLR 238
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ F+ + + + V + WCLH + C++ + ++ + + + N D +D+E
Sbjct: 239 PVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLESCK 298
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 299 NALILNSVFDAGDDAICIKS 318
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK +G+ +T AI +AI A G K V P G +LT I L+S+V L+
Sbjct: 60 NICDFGAKSNGVTLNTEAINNAIKAVHDKGGGK---VVIPEGLWLTGPIVLQSNVNLHAE 116
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 117 KNALIVFSSDTSLYPIITTSFEGLDVKRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 176
Query: 119 KFVVTKNEIKNVMVS-----------WNHTGAC------SGDE----------------- 144
K +T + KN++ S + + GA +G E
Sbjct: 177 KDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWEDMKSW 236
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + + + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 237 LRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVES 296
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 297 CKNVLIANCFFDAGDDAICLKS 318
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI AI G K V P G +LT I L+S+V L+
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHDKGGGK---VIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A NA ++ ITG GV DG
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 175
Query: 119 KFVVTKNEIKNVMVS----------W-----------------NHTGACSGDE------- 144
K +T + KN++ S W N + +E
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSW 235
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + V + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 236 LRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVES 295
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 CKNVLIANCFFDAGDDAICLKS 317
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKPCQVRF-PPGEYLTATIRLKSHVTLNIH 73
S+ +FGA GDG+ +TAA + A+ + + F P G +LT + L SH TL +H
Sbjct: 68 SLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHFTLFLH 127
Query: 74 EDATLLGGPRIEDYP-------------EESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
DA +L DY + R+ +L N TDV ITG G +DGQ
Sbjct: 128 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 187
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W RP L+ + + + N+ W +H V
Sbjct: 188 PW-------------WGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N FI+ ++I PN DGI+ + NT I I +GDD I K+
Sbjct: 235 RNIFIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 282
>gi|255691074|ref|ZP_05414749.1| galacturan 1,4-alpha-galacturonidase [Bacteroides finegoldii DSM
17565]
gi|260623423|gb|EEX46294.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 436
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + D+
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLDL 222
Query: 187 SIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 48/255 (18%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGAK DG +T AI +AI A +V P G +LT + L+++V L++ ++A +
Sbjct: 62 DFGAKADGETLNTEAINNAIKAVSEKGG-GKVVIPEGLWLTGPVVLQNNVNLHVEKNALV 120
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA------MKFVVT 123
L + YP + + + A NA ++ ITG GV+DG + +T
Sbjct: 121 LFSGDADLYPLVRTSFEGLDMLRCQSPISAMNAENIAITGHGVLDGSGDSWRPVKRNKMT 180
Query: 124 KNEIKNVMVSWN--------------------HTGACSGDE------------CRPRLVG 151
+ K+++ S TG+ E RP L+
Sbjct: 181 DGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREISDSEWEGMKRWLRPVLLS 240
Query: 152 FLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVIT 211
+ + V + V R WCLH + C++ + + ++ + + N D +D+E N V+T
Sbjct: 241 IVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDALDVESCKNVVVT 300
Query: 212 RVQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 301 NSLFDAGDDAICIKS 315
>gi|299148492|ref|ZP_07041554.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 3_1_23]
gi|336406869|ref|ZP_08587515.1| hypothetical protein HMPREF0127_04828 [Bacteroides sp. 1_1_30]
gi|423294937|ref|ZP_17273064.1| hypothetical protein HMPREF1070_01729 [Bacteroides ovatus
CL03T12C18]
gi|295086741|emb|CBK68264.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513253|gb|EFI37140.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 3_1_23]
gi|335948542|gb|EGN10246.1| hypothetical protein HMPREF0127_04828 [Bacteroides sp. 1_1_30]
gi|392674517|gb|EIY67963.1| hypothetical protein HMPREF1070_01729 [Bacteroides ovatus
CL03T12C18]
Length = 436
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + D+
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLDL 222
Query: 187 SIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A SAI + Q+ PPG++LT + L SH TL
Sbjct: 54 HSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTL 113
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ +D+ +L ++P+ R+ +V N TDV ITG G +DG
Sbjct: 114 FLQKDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDG 173
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + + + N+ L W +H
Sbjct: 174 QGSYW-------------WDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHP 220
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I ++I + PN DGID + N I I +GDD I K+
Sbjct: 221 VYSSNIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIVSGDDCIAIKS 271
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 117/285 (41%), Gaps = 38/285 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ ++GA D T AIQ+A+D C V P G + T +R+ TL++ A
Sbjct: 11 IREYGAISDSDDPATDAIQTALDEC--AETGGTVYVPAGRFRTGPLRIGDRTTLHLDPGA 68
Query: 77 TLLGGPRIEDYPEESSRW------------YVVLAENATDVGITGGGVVDGQAM---KFV 121
TL + +P SRW +V AEN V I+G G +DG +F
Sbjct: 69 TLTFVGDYDAFPTVESRWEGWNQYGFHPCLWVTDAEN---VEISGRGTIDGNGQYWWQFY 125
Query: 122 VTKNE-----IKNVMVSWNHTGACSGD----ECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
++ ++ + +N + D RP L NV V V L+ +W
Sbjct: 126 GADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTLQNSPFWN 185
Query: 173 LHIVRCDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG-- 229
H+V +N I D+++ PN DGIDI+ S I+ I+ GDDAIC K+
Sbjct: 186 THVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSGKNAE 245
Query: 230 ------PLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P +T T+ + + +GS D + + N T
Sbjct: 246 GREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVAVTNCTF 290
>gi|189467634|ref|ZP_03016419.1| hypothetical protein BACINT_04024 [Bacteroides intestinalis DSM
17393]
gi|189435898|gb|EDV04883.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 436
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+ D T IQ+ ID V P G YL+ + K L + E
Sbjct: 51 YKITDYSVVNDSTLIQTEKIQAVIDQASSKGGGV-VIIPKGTYLSGALFFKPKTHLYLEE 109
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G I ++P +S +++ L A+ I+G G ++G +++
Sbjct: 110 GAVLKGSDDISNFPIINTRIEGQSLKYFAALVNADGVNGFTISGKGTINGNGLRY----- 164
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ DE RPRLV +V + VRL +W HI +C+N +
Sbjct: 165 -WKSFWLRRSVIPKCTNMDELRPRLVHISNSNDVQISGVRLINSPFWTTHIYKCNNVKLL 223
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 224 NLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGGKGP 272
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G D T IQ+ ID+ N V P G +L+ ++ K L + E
Sbjct: 538 YCITDYGVVNDSTIVQTEKIQAVIDSAEK-NGGGVVIIPKGTFLSGSLFFKPKTHLYLEE 596
Query: 75 DATLLGGPRIEDYP------EESSRWYVVLAENATDVG---ITGGGVVDGQAMKFVVTKN 125
ATL G I D+ E S Y NA +V ++G G ++G M++
Sbjct: 597 KATLKGSDDISDFAVVDTRMEGQSLKYFAALLNADEVDGFTVSGKGTINGNGMRY----- 651
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRL+ +NV + VRL +W H +C+ +
Sbjct: 652 -WKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHFYKCEQLRLL 710
Query: 185 DMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I + P+ DG+DI+ N +I I DD I K GP
Sbjct: 711 NLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGGKGP 759
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 50 VRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWY---------VVLA 99
V PPG + + I LKS+V L+I E A + IEDY P +R + A
Sbjct: 87 VLVPPGRWKSGRIMLKSNVNLHIAEGAEIEFSGDIEDYLPAVFTRHEGIELFGAGAFIYA 146
Query: 100 ENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN-----------HTGACSGDECRPR 148
+ ++ +TG G + G A+ V K +V + G D PR
Sbjct: 147 DGENNIAVTGKGTITGPALDSEVRKRTNTAAVVEIDVPATMPLNERLFDGMEGRDFQPPR 206
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
+ + C NV + + + A W + C+N IR +++ P DGIDIE S N
Sbjct: 207 TIAPINCTNVFIEGITMNRSALWNVVPTYCENVIIRGITV-NSLEIPRGDGIDIESSKNV 265
Query: 209 VITRVQIDTGDDAICPKTYTG 229
+I ++T DD K+ G
Sbjct: 266 LIEYCTLNTHDDCFTLKSGRG 286
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ FGAKGDG+ +T AI AI +V P G +LT I L S+V L +
Sbjct: 60 NISKFGAKGDGMTLNTKAINDAIKEVNQ-RGGGKVIIPEGTWLTGPIELLSNVNLYTERN 118
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITG----------------- 109
A +L E YP E + A NA ++ ITG
Sbjct: 119 ALILFTGDFEAYPIIPTSFEGLETRRCQSPISARNAENIAITGYGIFDGNGDCWRPVKKE 178
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CR 146
GGV+D Q + T +K M +N + DE R
Sbjct: 179 KLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWNEIRAWLR 238
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ F+ + + + V + WCLH + C++ + ++ + + + N D +D+E
Sbjct: 239 PVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLESCK 298
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 299 NALILNSVFDAGDDAICIKS 318
>gi|326431062|gb|EGD76632.1| hypothetical protein PTSG_07745 [Salpingoeca sp. ATCC 50818]
Length = 476
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 19 DFGA-KGDGIHY--DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
DFGA GD + +T A+ A +A V+ G++ A + S+ L I +
Sbjct: 41 DFGAVAGDPEAWLNNTLAMHRAFNAAVASTGTVCVQ--GGDFTVADVYAPSNSVLFIAQQ 98
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
A LL P + ++ E+ +V + GGG + G A ++ + + N +N
Sbjct: 99 ARLL-----SSVPNCTHA--LLHLEHVQNVTVEGGGTLYGNAEHYIASYSAKDN---RFN 148
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
T D RPR++ +V + + + + W +HI + + I+GD P
Sbjct: 149 PTKP---DGSRPRVIFMHNATDVVLREISVLNASDWHVHIQASRRVLVDSVYIHGDSRFP 205
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYT--GPLYNLTATDSWIRTKSSAIKLGSA 253
NNDGID + S + I ID DD IC K+ GPL N+ + IR++S AIK GS
Sbjct: 206 NNDGIDPDSSIDVTIRNSIIDVADDGICLKSTAGMGPLANVYVHNCSIRSQSHAIKFGSN 265
Query: 254 SWFDFKALVFDNITI 268
+ D ++FD+I I
Sbjct: 266 TDEDMYNVLFDHIAI 280
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GD + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 27 NLLDFGARGDERTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 83
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y P +R+ +V A + +V ITG GV+DG A
Sbjct: 84 GTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCKNVAITGSGVLDGSADNEHWWSW 143
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V +
Sbjct: 144 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVED 203
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 204 VKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 261
Query: 223 CPKT 226
K+
Sbjct: 262 VIKS 265
>gi|427383479|ref|ZP_18880199.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
gi|425728663|gb|EKU91518.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
Length = 432
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+ D T IQ+ ID V P G YL+ + K L + E
Sbjct: 47 YKITDYSVVNDSTLLQTEKIQAVIDQASSKGGGV-VIIPKGTYLSGALFFKPKTHLYLEE 105
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G I ++P +S +++ L A+ I+G G ++G +++
Sbjct: 106 GAVLKGSDDISNFPIINTRIEGQSLKYFAALVNADGVNGFTISGKGTINGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ DE RPRLV +V + VRL +W HI +C+N +
Sbjct: 161 -WKSFWLRRSVIPKCTNMDELRPRLVHVSNSNDVQISGVRLINSPFWTTHIYKCNNVKLL 219
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P+ D IDI+ +N ++ + DDAI K GP
Sbjct: 220 NLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGGKGP 268
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ FGAKGDG+ +T AI AI +V P G +LT I L S+V L +
Sbjct: 57 NISKFGAKGDGMTLNTKAINDAIKEVNQ-RGGGKVIIPEGTWLTGPIELLSNVNLYTERN 115
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITG----------------- 109
A +L E YP E + A NA ++ ITG
Sbjct: 116 ALILFTGDFEAYPIIPTSFEGLETRRCQSPISARNAENIAITGYGIFDGNGDCWRPVKKE 175
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CR 146
GGV+D Q + T +K M +N + DE R
Sbjct: 176 KLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWNEIRAWLR 235
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ F+ + + + V + WCLH + C++ + ++ + + + N D +D+E
Sbjct: 236 PVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLESCK 295
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 NALILNSVFDAGDDAICIKS 315
>gi|167761858|ref|ZP_02433985.1| hypothetical protein BACSTE_00201 [Bacteroides stercoris ATCC
43183]
gi|167700228|gb|EDS16807.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 432
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ D+G D T IQ+ ID N + P G +L+ +I K L + E
Sbjct: 47 YTITDYGVANDSTILQTEKIQAVIDRAAE-NGGGVIIIPKGTFLSGSIFFKPKTHLYMEE 105
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G I ++ +S +++ L A+ I+G G ++G ++
Sbjct: 106 GAVLKGSDDISNFAIVNTRIEGQSLKYFAALVNADKVNGFTISGKGTINGNGHRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRLV +V + VRL +W HI RC N +
Sbjct: 161 -WKSFWLRRQVIPKCTNMDELRPRLVYISNSNDVQISGVRLMNSPFWTTHIYRCSNIKLL 219
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P++D IDI+ +N ++ + DDA+ K GP
Sbjct: 220 NLHIFAPAAPVKAPSSDAIDIDVCSNVLVKNCYMSVNDDAVALKGGKGP 268
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V+D+GA DG +T AI AI AC +V P G+Y+T I L +V L I E
Sbjct: 56 NVMDYGAVADGSVLNTEAIAEAIKACNAAGGG-KVVLPAGKYVTGPIHLLDNVNLEIAEG 114
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA--------- 117
A +L +P + + ++ A++ ++ ITG GV++GQA
Sbjct: 115 AEVLFTTDKSLFPLAHTSYEGTELMNFSPLIYAKDKKNIAITGKGVLNGQANNGNWWPWC 174
Query: 118 -----------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNV 160
+K + K V V+ G G+ RP + GC NV +
Sbjct: 175 GNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGM--GEFLRPTFIEPFGCENVLI 232
Query: 161 WNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
++ + +W +H ++ +N + +++ D + PNNDG D E + N I +TGDD
Sbjct: 233 KDITIINAPFWVVHPIKSNNVVVDGITV--DSHGPNNDGCDPEYAKNVWIKNCVFNTGDD 290
Query: 221 AICPKT 226
I K+
Sbjct: 291 CIAIKS 296
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 49/245 (20%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP- 88
+T AI AI AC N +V P G +LT I +KS+V L + + A + +DYP
Sbjct: 4 NTDAINKAIAACSE-NGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFDDYPL 62
Query: 89 ----EESSRWYVVLAE----NATDVGITGGGVVDG--QAMKFV----VTKNEIKNVMVS- 133
E + Y + N ++ ITG GV+DG A ++V +T+++ K ++ S
Sbjct: 63 VLTTYEGTEQYRCQSPISGWNLENIAITGYGVIDGGGDAWRYVKKSKLTESQWKKLVSSG 122
Query: 134 ---------WNHTGACSG-----------------------DECRPRLVGFLGCRNVNVW 161
W A +G D RP +V + C+N+ +
Sbjct: 123 GVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMVNLVKCKNILLE 182
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
V + W +H + +N ++++++ + + N DGID+E N VI + D GDDA
Sbjct: 183 GVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVIYDCKFDVGDDA 242
Query: 222 ICPKT 226
IC K+
Sbjct: 243 ICMKS 247
>gi|298482127|ref|ZP_07000315.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
gi|298271684|gb|EFI13257.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
Length = 436
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N V P G YL+ + K L++ + A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVVVIPEGTYLSGALFFKPGTHLHLEKKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 VLKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + + C+ DE RPRL+ NV V +VRL +W HI +CD+ + D+
Sbjct: 163 KSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLDL 222
Query: 187 SIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+VI +GA GI T AIQSAID K +V P G +LT + LKS+V L++HE+
Sbjct: 55 NVIHYGADNKGIELSTNAIQSAIDDAHR-LKGGRVLIPEGTFLTGALELKSNVELHLHEN 113
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------M 118
A + DY P +R+ ++ A +A ++ ITG G +DG+
Sbjct: 114 AYVSFSQDTRDYLPLVLTRYEGIELYNYSPLIYAHHAENIAITGAGTLDGRGDEHHWWPW 173
Query: 119 KFVVTKN-----------EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLRE 167
K+ E+ + G R + C+N+ + V +++
Sbjct: 174 KYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYNCQNILIEGVTVKD 233
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V +N +R ++I G + PN DG++ E + +I D GDD I K+
Sbjct: 234 SPMWQVHPVLSENVIVRGVNIIG--HGPNTDGVNPESCRHVLIEDCYFDNGDDCIAIKS 290
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-ATIRLKSHVTLNIHED 75
V DFGA GDG D+ +A A + +V P G + + + L+SH+ L++ +
Sbjct: 58 VTDFGAVGDG-RTDSHDAITAAIAAAHTDGGGRVVLPEGTWRSDGPLHLESHIELHVSDG 116
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKN 125
A L+ GP DY P +RW ++ A + DV ITG GV+DG T
Sbjct: 117 AHLIFGPDPADYLPAVHTRWEGTEMYGYSPLIYAHDVHDVAITGNGVIDGNPDSEFHTWT 176
Query: 126 EIKNVMVS-----------WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
+ ++ V G RP ++ V + + +R +W H
Sbjct: 177 DKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVRNSPFWINH 236
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+V D+ +R +++ D + PNNDG+D++ S + +I TGDD++ K+
Sbjct: 237 LVYTDDAVVRGLTV--DSHNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKS 286
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 39/282 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H+ ++ DFGA GDG +T + AI A + Q+ PG +LTA + SH+TL
Sbjct: 35 HVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHMTL 94
Query: 71 NIHEDATLLG---------GPRIEDYPEESS----RWYVVL-AENATDVGITG-GGVVDG 115
+ AT++ P + Y R+ ++ ++ D +TG G +DG
Sbjct: 95 FLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGSIDG 154
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W R RLV + N+ + +V L+ +W LH
Sbjct: 155 QGGWW-------------WEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHP 201
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------Y 227
C N I ++I + PN DGID + N ++ I GDDA+ K+ Y
Sbjct: 202 YDCTNVTISGVTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEY 261
Query: 228 TGPLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+T + R++ SA I +GS + ++ +++ I
Sbjct: 262 NRPCVNVTIRNVIARSQISAGISIGSEMSGGVEQVLVEDVYI 303
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+ DFG GDG +T A QSAI Q+ P G++LT + L SH TL
Sbjct: 53 HSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTL 112
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITGG-GVVDG 115
+++DA LL I ++P + R+ ++ N TDV +TGG G +DG
Sbjct: 113 YLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDG 172
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + + + N+ L W LH
Sbjct: 173 QGAFW-------------WQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHP 219
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDG 199
V N I+ ++I +PN DG
Sbjct: 220 VYSSNIIIKGLTIIAPVPSPNTDG 243
>gi|218134203|ref|ZP_03463007.1| hypothetical protein BACPEC_02093 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991578|gb|EEC57584.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 427
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 17 VIDFGAKGDG-IHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ D+G DG IH T +Q ID N + P G YLT + + V L + D
Sbjct: 46 LTDYGINADGNIH--TEQLQKLIDT-AADNGGGVIVVPEGTYLTGALFFRQGVNLYVKAD 102
Query: 76 ATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMK----FVV 122
L G I DYP +R +Y L A+ + G G +DG ++ F +
Sbjct: 103 GMLKGSDDISDYPVIKTRIEGENCIYYAALINADGIDGFTMCGEGTIDGSGLRSWKSFWL 162
Query: 123 TKNEIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ SWN AC+ DE R RLV GC NV V +RL+ +W HI +C +
Sbjct: 163 RR--------SWN--PACTNKDEQRARLVYISGCTNVTVAGLRLQNSQFWTNHIYKCSHV 212
Query: 182 FIRDMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+ SI+ P+ D IDI+ + +I +++ DDA+ K GP
Sbjct: 213 RYINCSIFSPRTPVKAPSTDAIDIDACSCVLIKGCRMEVNDDAVALKGGKGP 264
>gi|29349561|ref|NP_813064.1| exopolygalacturonase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341471|gb|AAO79258.1| Exopolygalacturonase precursor [Bacteroides thetaiotaomicron
VPI-5482]
Length = 432
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S+ D+G D T IQ ID N + P G +L+ ++ K++ L++ E
Sbjct: 47 YSITDYGVANDSTVVQTKKIQEVIDLAAR-NGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 105
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
DA L G I +P + +R +++ L A+ I+G G ++G +++
Sbjct: 106 DAVLKGSDDISHFPVKMTRMEGQTLKYFMALVNADGLDGFTISGKGTLNGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ +E RPR++ C+N + +R+ +W H +C +
Sbjct: 161 -WKSFWLRRSINPDCTNMEEMRPRIIYLSNCKNTQIEGIRIMNSPFWSTHFYKCSFLKLL 219
Query: 185 DMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I P+ D +D++ NN +I + DDA+ K GP
Sbjct: 220 NLRITSPASPVKAPSTDAVDLDVCNNVLIKNCYMSVNDDAVALKGGKGP 268
>gi|317474381|ref|ZP_07933655.1| hypothetical protein HMPREF1016_00634 [Bacteroides eggerthii
1_2_48FAA]
gi|316909062|gb|EFV30742.1| hypothetical protein HMPREF1016_00634 [Bacteroides eggerthii
1_2_48FAA]
Length = 510
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 32/260 (12%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
++D+ G +TA +Q AID N + FP G Y T ++++S++++ + E A
Sbjct: 149 IMDYQVDNTGKSIETAKLQKAIDDVSRMNGV--LYFPAGIYKTGELKMRSNMSVILSEGA 206
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
LLG ++DY ++S ++ +N ++ + G GV+DG W
Sbjct: 207 LLLGSEDVKDYADKS----LIRLDNVSNFRLLGYGVIDGSG----------------W-- 244
Query: 137 TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF---N 193
+G + L+ C ++ + V LR+P++W + R N ++++ I+ + N
Sbjct: 245 SGLRNNGGTGFHLLYASDCNDILIDGVMLRDPSFWNTRVYRSKNFHLKNIKIFNNRPYKN 304
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY----NLTATDSWIRTKSSAIK 249
N DGID + S + +T I GDD + K N+ D S+A K
Sbjct: 305 WTNTDGIDFDSSVDCSVTHAVIHAGDDNLVVKGLDKERLFISENILFDDVLTVGNSAATK 364
Query: 250 LGSASWFD-FKALVFDNITI 268
+G+ + + FK + F NI +
Sbjct: 365 IGTETGVEYFKNITFRNIDV 384
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D GA+ + T AIQSAID K V P G + T I LKS+V L+I E A
Sbjct: 74 ITDKGARAGAMA--TKAIQSAIDEVSK-KKGGTVIVPAGTWRTGRISLKSNVNLHISEGA 130
Query: 77 TLLGGPRIEDY----------PEESSRWYVVLAENATDVGITGGGVV----DGQAMKFVV 122
L P IEDY E S ++ A ++ +TG G + DG + +
Sbjct: 131 ELRFSPEIEDYLPAVFTRNEGVELMSLGALIYANGQENIAVTGKGKLVGPPDGPVRQRYM 190
Query: 123 TKNEIKNVMVSWN------HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
N I+ V+ + + G G P + + C+ V + + L +W + V
Sbjct: 191 NVNVIEKVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHNTPFWNVVPV 250
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
CDN IR +++ P DGIDIE S N +I + +GDD K G
Sbjct: 251 YCDNVIIRGITVQ-SVGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAGRG 302
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 44/283 (15%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+++ DFG GDG +T A + A++ Q+ PPG +LT L SH+TL +
Sbjct: 77 YNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNLTSHMTLFL 136
Query: 73 HEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDGQA 117
E A +LG +++P + R+ ++ +N DV ITG G ++GQ
Sbjct: 137 AEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGYNGSINGQG 196
Query: 118 MKFVVT--KNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
+ + + +KN RP LV + +++ V N+ LR +W H
Sbjct: 197 EVWWLKHRRRMLKN---------------TRPPLVQLMWSKDIVVTNITLRNSPFWHFHP 241
Query: 176 VRCDNTFIRDMSIYGDFN-TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPL 231
C N + +++I + PN DGID + + +I I GDDAI K+ G
Sbjct: 242 YDCTNVTVSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIA 301
Query: 232 YNLTATDSWIRT------KSSAIKLGSASWFDFKALVFDNITI 268
Y ++++ IR S+ I +GS + +N+ I
Sbjct: 302 YGRSSSNILIRNVTVRSLVSAGISIGSEMSGGVANITVENVHI 344
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
Length = 1095
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRLV F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+++++DFGAK D AI AI AC V P G + T I LKS+V L+
Sbjct: 46 RVYNIMDFGAKPDTPDAPCHEAINQAIMACNQEGGG-TVLVPEGTFYTGPITLKSNVNLH 104
Query: 72 IHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ----- 116
+ E A L + Y P +RW ++ A T++ +TG GV+DGQ
Sbjct: 105 VSEGAVLKFSTDQDLYFPAVITRWEGLDCYNAHPLIYAYGETNIALTGKGVIDGQGSNEN 164
Query: 117 ----------------------AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLG 154
+ + ++ E+K + T D RP+L+ F
Sbjct: 165 WWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPE---DGLRPQLINFYS 221
Query: 155 CRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQ 214
C V + +V L +W +H + C++ +R + I+ PN DG D E N +I +
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN--RGPNGDGCDPESCKNVLIENCR 279
Query: 215 IDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNI 266
DTGDD I K+ + P N+ + ++ + +GS ++ L ++
Sbjct: 280 FDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGGVVIGSEISGGYRNLYVEDC 339
Query: 267 TI 268
+
Sbjct: 340 VM 341
>gi|315608696|ref|ZP_07883674.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315249546|gb|EFU29557.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 441
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G K D + T AIQ+ ID + V P G + + + + L++ E
Sbjct: 52 YVITDYGVKADSMLVQTEAIQAVIDRAA-ADGGGVVVVPRGTFRSGALFFRPGTHLHLPE 110
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
A L G RI +P E+ +++ L A+ ITG G +DG +
Sbjct: 111 GARLKGSDRIAHFPVLTTRFEGETCKYFAALVNADGVDGFTITGRGTIDGSGFYYW---- 166
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + WN + D RPRLV C NV V +V L W H+ RCD+ D
Sbjct: 167 QEFWIRRQWN-PQCTNKDAQRPRLVYISNCSNVTVQDVHLVNSPVWTNHLYRCDHVRYLD 225
Query: 186 MSIY----GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATD 238
IY G P++D IDI+ ++ +I ++ DDA+ K G + +T+
Sbjct: 226 CHIYAPTNGPVKAPSSDAIDIDVCHDVLIRGCYMNVNDDAVVLKGGKGTFADRDSTN 282
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A A+ + + P G +LT + L SH+TL +
Sbjct: 44 SIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHMTLFLA 103
Query: 74 EDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQAM 118
A L +P E Y + + DV ITG G++DGQ
Sbjct: 104 RGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKGIIDGQGD 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP L+ F+ +++ N+ L+ +W +H V C
Sbjct: 164 -------------VWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
DN I +M I ++PN DG+D + S N I I TGDD + K+
Sbjct: 211 DNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKS 258
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNIGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A Q AI + + PPG++LT + L SH TL
Sbjct: 51 HSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDG 115
+ ++AT+LG ++P + ++ N TDV ITG G +DG
Sbjct: 111 FLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + ++ + N+ L + W +H
Sbjct: 171 QGSYW-------------WDKFHKGELKLTRPYMIEIMFSDHIQISNLTLIDSPSWFVHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I+ ++I ++PN DGI+ + +NT I I +GDD + K+
Sbjct: 218 IYSSDIIIQGLTILAPVDSPNTDGINPDSCSNTRIEDCYIVSGDDCVAIKS 268
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
Length = 1095
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRLV F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 48/261 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
H ++ D+GA G+G++ +T AI+AC V PPG + T I+L+S + L+
Sbjct: 19 HTVTISDYGAVGNGVYDNTRVFHQAIEACAKAGGGTVV-IPPGIWRTGPIKLQSRIELHA 77
Query: 73 HEDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDG-------- 115
A ++ EDYP S + + E DV ITG G+ DG
Sbjct: 78 SAGALVVFSKFFEDYPLLMSTYEGRQMFRCQSPLDGEGLEDVAITGSGIFDGSGEAWRPV 137
Query: 116 --------QAMKFVVTKNEIKNVMVSWNHTGACSGDE----------------------C 145
Q + + + + + + W A G E
Sbjct: 138 KQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQDYVPVRDYL 197
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ C+ + + + A WCLH + I+++++ + N DG+DI+
Sbjct: 198 RPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDIDSC 257
Query: 206 NNTVITRVQIDTGDDAICPKT 226
+ D GDDAIC K+
Sbjct: 258 KYVTVENSSFDVGDDAICLKS 278
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 102/259 (39%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA G+G TAA AID + P G + T I LKS++ L++ +
Sbjct: 51 NLADFGAVGNGEELCTAAFAKAIDTLAEKGG-GHLIVPAGVWFTGPIVLKSNIDLHLEKG 109
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L P ++ YP + + V N +V ITG G +DG + K E
Sbjct: 110 AVILFSPDVDLYPLVETVFEGLDTRRCQSPVSGRNLENVAITGEGAIDGNGHYWRPLKRE 169
Query: 127 IKNVMVSWNHTGACSG--------------------------------DE-------CRP 147
K W T A G +E RP
Sbjct: 170 -KVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRP 228
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V + C+NV + V + W LH + C+N I ++ + N DG+D+E N
Sbjct: 229 VMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKN 288
Query: 208 TVITRVQIDTGDDAICPKT 226
+I D GDD IC K+
Sbjct: 289 ALIVNSTFDVGDDGICLKS 307
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 1 VQLLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
V +++ S ++V +GAK D T AI+ AIDA V FP G+YLT
Sbjct: 17 VLVVIFTSAQAQSYYNVTKYGAKNDSSKLATVAIKKAIDAASKAGGGT-VYFPAGKYLTG 75
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVV---------LAENATDVGITGG 110
I LKS++T+ I A L +DY P SR+ V A A ++ I G
Sbjct: 76 AIHLKSNITIFIDAGAELHFSDNFDDYLPMVESRYEGVDVKSFSPLFYAYKAENISIIGR 135
Query: 111 GVVDGQAMK---FVVTKNE-------------IKNVMVSWNHTGACSGDECRPRLVGFLG 154
G++DG K FV E + +V + RP + +
Sbjct: 136 GLIDGHGKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMF 195
Query: 155 CRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQ 214
C+NV + + +R +W ++ +N I ++I + ++PN DGI+ E N I+
Sbjct: 196 CKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTI-NNPHSPNTDGINPESCKNVHISDCH 254
Query: 215 IDTGDDAICPKT 226
I GDD I K+
Sbjct: 255 ISVGDDCITIKS 266
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 23/245 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGAKGDG+ DT IQ+AI CP K +V P G Y +++ LK + L I +
Sbjct: 103 NVRDFGAKGDGVQDDTGFIQAAIMCCP---KNGRVLVPEGIYRVSSLFLKDDLRLEIGKG 159
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV--- 132
A L +P + ++G G +D ++T +KNV++
Sbjct: 160 AVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLD--MFSAIITGINVKNVVLYGQ 217
Query: 133 ------------SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
+W + RPR++ C +V V +R++ W +H ++
Sbjct: 218 GLIEGNAGYEEDNWWYNAKVRRIAFRPRMIFLNHCEHVVVQGIRVQNSPSWNIHPYFSNH 277
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTAT 237
D+++ ++PN DG+D E + I V GDD I K+ Y G Y + +
Sbjct: 278 LRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRVPSE 337
Query: 238 DSWIR 242
D IR
Sbjct: 338 DIVIR 342
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRLV F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRLV F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAI----DACPPGNKPCQVRFPPGEYLTATIRLKSHV 68
H+ V ++GA GDG +TAA A+ P G V PPG++LT L S
Sbjct: 43 HVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVV--PPGKWLTGPFNLTSCF 100
Query: 69 TLNIHEDATLLGGPRIEDYP-------------EESSRWY-VVLAENATDVGITG-GGVV 113
TL + E A +L ++ +P E R+ + N TDV ITG G +
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
+GQ V W+ A R L+ L N+ + NV + YW L
Sbjct: 161 NGQGQ-------------VWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNL 207
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H C N I ++I N+PN DGID + S+ I I +GDD + K+
Sbjct: 208 HPTYCTNVTISGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKS 260
>gi|336414751|ref|ZP_08595095.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
gi|335942121|gb|EGN03969.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
Length = 436
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ + A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEKKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 VLKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + + C+ DE RPRL+ NV V +VRL +W HI +CD+ + D+
Sbjct: 163 KSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLDL 222
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GD + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 27 NLLDFGARGDERTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 83
Query: 76 ATLLGGPRIEDY------PEESSRWY----VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y E Y +V A + +V ITG GV+DG A
Sbjct: 84 GTIKFIPDPERYLPVVLTKFEGIELYNYSPLVYALDCKNVAITGSGVLDGSADNEHWWPW 143
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V +
Sbjct: 144 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVED 203
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 204 VKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 261
Query: 223 CPKT 226
K+
Sbjct: 262 VIKS 265
>gi|383120494|ref|ZP_09941222.1| hypothetical protein BSIG_2498 [Bacteroides sp. 1_1_6]
gi|382985013|gb|EES68537.2| hypothetical protein BSIG_2498 [Bacteroides sp. 1_1_6]
Length = 432
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S+ D+G D T IQ ID N + P G +L+ ++ K++ L++ E
Sbjct: 47 YSITDYGVANDSTVVQTKKIQGVIDLAAR-NGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 105
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
DA L G I +P + +R +++ L A+ I+G G ++G +++
Sbjct: 106 DAVLKGSDDISHFPVKMTRMEGQTLKYFMALVNADGLDGFTISGKGTLNGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ +E RPR++ C+N + +R+ +W H +C +
Sbjct: 161 -WKSFWLRRSINPDCTNMEEMRPRIIYLSNCKNTQIEGIRIMNSPFWSTHFYKCSFLKLL 219
Query: 185 DMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I P+ D +D++ NN +I + DDA+ K GP
Sbjct: 220 NLRITSPASPVKAPSTDAVDLDVCNNVLIKNCYMSVNDDAVALKGGKGP 268
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ +F G+ +T + A C + + PPG YLT T L SH TL +
Sbjct: 68 SITEFVGVGNERTLNTKTFREAFSTCH-XDGGTLLYVPPGVYLTETFHLTSHRTLYLATG 126
Query: 76 ATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQAMKF 120
++ ++P E + Y+ + + DV ITG G +DGQ ++
Sbjct: 127 TIIMATQDSSNWPLIAPLPSYGRGRERPAGRYMSFIHGDGVXDVVITGENGTIDGQGDEW 186
Query: 121 VVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN 180
WN + RP LV F+ R++ + NV + +W +H C N
Sbjct: 187 -------------WNKWKQRTLQFTRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSN 233
Query: 181 TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTAT 237
+R ++I ++PN DGID S+N I I TGDD + K+ G +Y ++
Sbjct: 234 VVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSS 293
Query: 238 DSWIR 242
D IR
Sbjct: 294 DITIR 298
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLK 65
S H S+ +FGA GDG +T A Q+A+ Q+ P G +LT + L
Sbjct: 29 SVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLI 88
Query: 66 SHVTLNIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG 110
SH+TL + + +L R D P R +V ++ DV ITGG
Sbjct: 89 SHLTLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHR-SLVYGKDVEDVVITGG 147
Query: 111 -GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DGQ V W+ S + R LV F+ +N+ V N+ L
Sbjct: 148 NGTIDGQGS-------------VWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSP 194
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C N IR +++ +PN DG+ + I I +G DA+ K+
Sbjct: 195 SWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKS 251
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FG GDG +T A A+ + + P G +LT + L SH+TL +
Sbjct: 44 SIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHMTLFLA 103
Query: 74 EDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDGQAM 118
A L +P E Y + + D+ ITG G++DGQ
Sbjct: 104 RGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGIIDGQGD 163
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V WN + RP L+ F+ +++ N+ L+ +W +H V C
Sbjct: 164 -------------VWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYC 210
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
DN I +M I ++PN DG+D + S N I I TGDD + K+
Sbjct: 211 DNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKS 258
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 42/267 (15%)
Query: 15 HSVIDFGAKGDG-IHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+S+ FGA + AI AI C ++ P GE+LT IR++SHV L +
Sbjct: 44 YSITQFGASPKASAAKNQKAINRAILMCSKKGG-GRIVVPRGEWLTGAIRMQSHVNLVVE 102
Query: 74 EDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQ-------- 116
E ATL E YP + W + A ATDV +TG G +DG
Sbjct: 103 EGATLKFAFEPELYPLVKTSWEGIGCWNYSPCIYAYQATDVALTGKGTIDGNGSKQTWWP 162
Query: 117 ---AMKFVVTKNEIKNVM---------------VSWNHTGACSGDECRPRLVGFLGCRNV 158
A ++ K E K V W+ G R +LV F+ +
Sbjct: 163 MCGAPRYGFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQLVNFVESDGI 222
Query: 159 NVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTG 218
+ ++ L +W +H + N + + + D PN DG D E + +I DTG
Sbjct: 223 LIKDLHLVNSPFWVIHPLLSKNITVDGVFVQND--GPNGDGCDPEACDGVLIQNCTFDTG 280
Query: 219 DDAICPKT---YTGPLYNLTATDSWIR 242
DD I K+ G L+N + + IR
Sbjct: 281 DDCIAIKSGRNNDGRLWNKPSQNIIIR 307
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
+GA GDG T A + AI+AC +V P G +LT I L S+V L++ + AT+
Sbjct: 62 YGAVGDGRTDCTDAFRQAIEACHRAGG-GRVVVPRGTFLTGPIHLASNVNLHLDDGATVR 120
Query: 80 GGPRIEDY-PEESSRWYVVLAENAT---------DVGITGGGVVDGQA------------ 117
Y P +RW V N + +V ITG GV+DGQA
Sbjct: 121 FKQDPAAYLPVVFTRWEGVEGMNYSPFIYAFGQENVAITGSGVLDGQADENHWWPWKGRK 180
Query: 118 ----MKFVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ + T++E + + G G RP + F CRNV + V +
Sbjct: 181 EYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRPNFIQFYRCRNVLIEGVTIV 240
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C+N +R +++ + PNNDG + E +I DTGDD I K+
Sbjct: 241 NSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRYVLIEDCLFDTGDDCIAIKS 298
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFGA+GD + + + AI+ ++ P G +LT I LKS++ L H
Sbjct: 27 NLLDFGARGDRRTDCSESFKRAIEELSK-QGGGRLIVPEGVFLTGPIHLKSNIEL--HVK 83
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
T+ P E Y P +R+ +V A + +V ITG GV+DG A
Sbjct: 84 GTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPW 143
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ V E+ G RP V F CRNV V
Sbjct: 144 KGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEG 203
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V++ WC+H V +N IR++ I PNNDGID E +I + + DTGDD++
Sbjct: 204 VKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEKCRFDTGDDSV 261
Query: 223 CPKT 226
K+
Sbjct: 262 VIKS 265
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++ FGAKGDGI +T AI AI A +V P G +LT I L S+V L ++
Sbjct: 59 NILQFGAKGDGITLNTKAINDAIKAVN-AKGGGKVVIPEGLWLTGPIELLSNVNLYTEKN 117
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF------ 120
A ++ YP + + + A NA ++ ITG GV DG +
Sbjct: 118 ALIVFSDDFNAYPILETSFEGLNTRRCQSPISARNAENIAITGYGVFDGSGDSWRPVKKG 177
Query: 121 ---------------VVTKN-------EIKNVMV--SWNHTGACSGDE--------CRPR 148
VV K+ +K + +N+ +E RP
Sbjct: 178 KLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWNEIRPWLRPV 237
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ + + V + V + WCLH + C++ I + ++ + + N D +D+E N
Sbjct: 238 LLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNA 297
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 298 LIINNIFDAGDDAICIKS 315
>gi|298383809|ref|ZP_06993370.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 1_1_14]
gi|298263413|gb|EFI06276.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 1_1_14]
Length = 433
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S+ D+G D T IQ ID N + P G +L+ ++ K++ L++ E
Sbjct: 48 YSITDYGVANDSTVVQTKKIQGVIDL-AARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 106
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
DA L G I +P + +R +++ L A+ I+G G ++G +++
Sbjct: 107 DAVLKGSDDISHFPVKMTRMEGQTLKYFMALVNADGLDGFTISGKGTLNGNGLRY----- 161
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ +E RPR++ C+N + +R+ +W H +C +
Sbjct: 162 -WKSFWLRRSINPDCTNMEEMRPRIIYLSNCKNAQIEGIRIMNSPFWSTHFYKCSFLKLL 220
Query: 185 DMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I P+ D +D++ NN +I + DDA+ K GP
Sbjct: 221 NLCITSPASPVKAPSTDAVDLDVCNNVLIKNCYMSVNDDAVALKGGKGP 269
>gi|28411804|dbj|BAC57279.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50509106|dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|222636649|gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group]
Length = 429
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRL----KSHV 68
+ V G+ GDG H DT A+ A A +P V P G+ YLT I L KS +
Sbjct: 52 VFDVRKHGSYGDGQHDDTKALSKAWAAACSSLQPSIVLVPKGKRYLTKHITLSGPCKSSI 111
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
T I + TL+ P+ D+ +E+ R +++ + + GGG VDG + +N K
Sbjct: 112 TFMI--EGTLVAPPKRSDWSKETIRHWIMF-NGVIGLTVAGGGTVDGNGK--IWWQNSCK 166
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
N AC+ P + F C N+ V N++L + + C N I ++I
Sbjct: 167 T-----NAKLACTES---PTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGLTI 218
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+PN DGI I S N +T I TGDD +
Sbjct: 219 TAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCM 252
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG +LT + L SH+TL
Sbjct: 37 HTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLTSHLTL 96
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVV--LAENATDVGITGG---GVVDGQAMKFVVTKN 125
+ + A +LG ++ W VV L V + GG +++G + VV
Sbjct: 97 FLEKGAVILGS-------QDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITG 149
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
N+ W + S + RP L+ + +V V N+ + +H V C N
Sbjct: 150 NNGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNV 209
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
I ++SI +PN GI + S++ I I TG DAI K+
Sbjct: 210 HIHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKS 254
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V DFGA GDGI DT AIQSAI ACPP + V P G Y + LK + L + +
Sbjct: 83 NVRDFGAAGDGIKDDTLAIQSAIMACPPQGR---VLIPAGRYSFVCLFLKDGINLELEKG 139
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKF---VVTKNEIKNVMV 132
A L E +P +Y + G G +G K ++T +KNV +
Sbjct: 140 AELSAVTDRERFP-----FYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNI 194
Query: 133 -------------SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+W H RPR V GC N+++ + ++ W +H +
Sbjct: 195 YGEGTLNGNASHENWWHNCKEMKIAWRPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSN 254
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTA 236
+ +++ ++ N DG+D E + + GDD I K+ Y G Y +
Sbjct: 255 HLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPS 314
Query: 237 TDSWIRTKS 245
IR S
Sbjct: 315 EHITIRQCS 323
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++ FGAKGDGI +T AI AI A +V P G +LT I L S+V L ++
Sbjct: 59 NILQFGAKGDGITLNTKAINDAIKAVN-AKGGGKVVIPEGLWLTGPIELLSNVNLYTEKN 117
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF------ 120
A ++ YP + + + A NA ++ ITG GV DG +
Sbjct: 118 ALIVFSDDFNAYPILETSFEGLNTRRCQSPISARNAENIAITGYGVFDGSGDSWRPVKKG 177
Query: 121 ---------------VVTKN-------EIKNVMV--SWNHTGACSGDE--------CRPR 148
VV K+ +K + +N+ +E RP
Sbjct: 178 KLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWNEIRPWLRPV 237
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ + + V + V + WCLH + C++ I + ++ + + N D +D+E N
Sbjct: 238 LLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNA 297
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 298 LIINNIFDAGDDAICIKS 315
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQQGGGTVV-VAPGYYKIGALFIKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + E
Sbjct: 117 ASDNIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMREE 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N ++ +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIK 273
>gi|189461863|ref|ZP_03010648.1| hypothetical protein BACCOP_02529 [Bacteroides coprocola DSM 17136]
gi|189431457|gb|EDV00442.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 464
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ + D+G D T IQ+ ID + P G +L+ ++ K + L I +
Sbjct: 65 YRITDYGVLNDSTIIQTQQIQAVIDKASQEGGGV-IYIPQGTFLSGSLFFKPNTHLYIEK 123
Query: 75 DATLLGGPRIEDYPEESSRW------YVVLAENATDVG---ITGGGVVDGQAMKFVVTKN 125
+ TL G I D+ +R Y NA V I+G G ++G +++
Sbjct: 124 EGTLKGSDDISDFAVIDTRMEGQNLKYFAALVNAIGVDGFTISGEGRINGNGLRY----- 178
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ +E RPRLV ++V + VRL +W H+ RC+N +
Sbjct: 179 -WKSFWLRRQVNPKCTNLEELRPRLVHIADSKDVQLSGVRLENSPFWTTHLYRCENVQLL 237
Query: 185 DMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P++D IDI+ N ++ + DDA+ K GP
Sbjct: 238 NLHIFAPHFPVKAPSSDAIDIDVCTNVLVKNCYMSVNDDAVALKGGKGP 286
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAI--DACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG +T Q+A+ Q+ P G +LT + L SH+TL
Sbjct: 33 HSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTL 92
Query: 71 NIHEDATLLGG------PRIE---------DYPEESSRWYVVLAENATDVGITGG-GVVD 114
+ E+A ++G P +E D P R ++ N +DV ITG GV+D
Sbjct: 93 FLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHR-SLINGYNLSDVVITGNNGVID 151
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ +V W H+ + RP +V FL V + N+ W +H
Sbjct: 152 GQG-----------SVWWDWLHSHEL--NHSRPHIVEFLHSEEVVISNLTFLNSPAWSIH 198
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + +++I + P DGI + +N I I G DAI K+
Sbjct: 199 PVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKS 250
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 54/262 (20%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDAC--PPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ DFGAK DG+ +T AI AI G K V P G +LT I L+S+V L+
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHDKGGGK---VIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 74 EDATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------M 118
++A ++ YP ++ + + A N ++ ITG GV DG
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNVENIAITGYGVFDGAGDRWRPVK 175
Query: 119 KFVVTKNEIKNVMVS----------W-----------------NHTGACSGDE------- 144
K +T + KN++ S W N + +E
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSW 235
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP L+ + + V + V + WCLH + C++ + D+ ++ + + N D +D+E
Sbjct: 236 LRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVES 295
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 CKNVLIANCFFDAGDDAICLKS 317
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 46/292 (15%)
Query: 17 VIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGAK D I AI C N V P G + T I LKS+V ++ E
Sbjct: 71 ITDFGAKPDTPDSPCHEEINRAIVTCSL-NGGGTVIVPKGTFYTGPITLKSNVNFHVEEG 129
Query: 76 ATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK------ 119
ATL + +P +RW ++ A T++ ITG G +DGQ K
Sbjct: 130 ATLKFSTDQSLYFPGVITRWEGLDCYNARPLIYAYGETNIAITGKGTIDGQGSKETWWPM 189
Query: 120 -----------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVW 161
V +N + ++ + T D RP+LV C V +
Sbjct: 190 CGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLYSCNTVLIE 249
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
++ L +W +H + C++ +R + ++ PN DG D E N +I DTGDD
Sbjct: 250 DITLLNSPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDC 307
Query: 222 ICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
I K+ + P N+ + +++ + +GS ++ L +N
Sbjct: 308 IAIKSGRNADGRKWNIPSENIIVRNCFMKNGHGGVVIGSEISGGYRNLYVEN 359
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAI--DACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG +T Q+A+ Q+ P G +LT + L SH+TL
Sbjct: 33 HSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTL 92
Query: 71 NIHEDATLLGG------PRIE---------DYPEESSRWYVVLAENATDVGITGG-GVVD 114
+ E+A ++G P +E D P R ++ N +DV ITG GV+D
Sbjct: 93 FLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHR-SLINGYNLSDVVITGNNGVID 151
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ +V W H+ + RP +V FL V + N+ W +H
Sbjct: 152 GQG-----------SVWWDWLHSHEL--NHSRPHIVEFLHSEEVVISNLTFLNSPAWSIH 198
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + +++I + P DGI + +N I I G DAI K+
Sbjct: 199 PVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKS 250
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
V D GA G I +DT Q+AIDAC VR GEYL I LKS++ L + + A
Sbjct: 40 VRDHGAGGTRIWFDTEGFQAAIDACAKAGG-GTVRVTRGEYLIGPIWLKSNIRLELQKGA 98
Query: 77 TLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
+L +P+ R ++ ++A +V + G G++DGQ + I ++
Sbjct: 99 EVLAATDPALFPQ-GERAGLINVKDADNVAVVGEGLIDGQGAVWWERIRAIWRANPNFAT 157
Query: 137 TGACSGDEC--RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNT 194
G + RPRL+ N+ VR+ + L + D+ I + I +
Sbjct: 158 DGQARQQQKDDRPRLILVSHSTNIRFEGVRIENSPSFHLVLNDTDHVTIDRVRITAPAHA 217
Query: 195 PNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
PN D ID DS + VIT I GDD + K+ GP
Sbjct: 218 PNTDAIDPIDSRHVVITNNVISVGDDIVAIKS-NGP 252
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLK 65
S H S+ +FGA GDG +T A Q+A+ Q+ P G +LT + L
Sbjct: 29 SVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLI 88
Query: 66 SHVTLNIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITGG 110
SH+TL + + +L R D P R +V ++ DV ITGG
Sbjct: 89 SHLTLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHR-SLVYGKDLEDVVITGG 147
Query: 111 -GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DGQ V W+ S + R LV F+ +N+ V N+ L
Sbjct: 148 NGTIDGQGS-------------VWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSP 194
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V C N IR +++ +PN DG+ + I I +G DA+ K+
Sbjct: 195 SWTIHPVYCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKS 251
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H+ V ++GA GDG +T A A+ + + + PPG++LT L S TL
Sbjct: 43 HVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCFTL 102
Query: 71 NIHEDATLLGGPRIEDYP------------EESSRWYV--VLAENATDVGITG-GGVVDG 115
+ E A +L + +P +E Y+ + N TDV ITG G ++G
Sbjct: 103 YLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTING 162
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q V W+ A R L+ L N+ + NV + YW LH
Sbjct: 163 QGQ-------------VWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHP 209
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I ++I N+PN DGID + S + I I +GDD + K+
Sbjct: 210 TYCTNVTISGVTILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKS 260
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 56/274 (20%)
Query: 50 VRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYP--------EESSRWYV-VLAE 100
V P G + TA I +KS V L I ++A L I+ YP +E R + AE
Sbjct: 57 VVIPDGIWFTAPIEIKSDVELRIEKNAILKFSKDIDQYPLIITNYEGQECIRAKSPITAE 116
Query: 101 NATDVGITGGGVVDGQA------MKFVVTKNEIKNVMVSWNHTGACSG------------ 142
NA ++GITGGGV+DG +F +T + + +M + G
Sbjct: 117 NAINIGITGGGVIDGSGDMWRPIKQFKITDRQWEALMKKSQYIIDTKGGGIWMPTESSFK 176
Query: 143 ---------------------DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
D RP +V C+ + + V + W +H C N
Sbjct: 177 GNEHNIQLDAENALEKASEYYDFYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNL 236
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYN 233
+R++++ + N DGID+E I +TGDDAIC K+ GP +
Sbjct: 237 TVRNVTVSNPYYAQNGDGIDVESCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCED 296
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKALVFDNIT 267
+ D + +GS K ++ +N T
Sbjct: 297 VYIHDCLVNEGHGGFVIGSEMSRGIKNVLVENCT 330
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
Query: 23 KGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGP 82
KG G T IQ AIDA V P G + + I LKS+V L++ E+A L G
Sbjct: 64 KGQG-SAQTKEIQQAIDAVSKKGG-GTVIIPAGNWHSGRIALKSNVNLHLEENAVLEFGG 121
Query: 83 RIEDY----------PEESSRWYVVLAENATDVGITGGGVVDGQ-----AMKFVVTKNEI 127
I DY E S + A ++ +TG G + G K V+ ++ I
Sbjct: 122 EIRDYLPVVFTRTEGVEVMSLGACIYANGQHNIAVTGKGKLVGPPANCPVRKQVMRQDVI 181
Query: 128 KNVMVSWN------HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+NV+ + + G G P V + C+NV + ++L +W + + CDN
Sbjct: 182 ENVVAANKPVSQRIYDGHDGGPVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIYCDNV 241
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG--------PLYN 233
IR +++ P+ DGIDIE S N +I ++ GDD K G P N
Sbjct: 242 IIRGITV-NSVGIPSGDGIDIESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTEN 300
Query: 234 LTATDSWIRTKSSAIKLGSASWFDFKAL-----VFDNITI 268
+ S R I +GS + + L VFD+ +
Sbjct: 301 VVIRYSLARQGHGGITVGSETAAMIRNLYVHDVVFDDTEV 340
>gi|423288916|ref|ZP_17267767.1| hypothetical protein HMPREF1069_02810 [Bacteroides ovatus
CL02T12C04]
gi|392669006|gb|EIY62498.1| hypothetical protein HMPREF1069_02810 [Bacteroides ovatus
CL02T12C04]
Length = 436
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + ++
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLNL 222
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 55 FGAKGDGLFLNTKAINDAIKDVNQRGGG--KVIIPEGVWLTGPIELLSNVNLYTEQNALV 112
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 113 LFTGNFEAYPIIATSFEGLETRRCQSPISARNAENIAITGHGTFDGNGDCWRPVKKGKLT 172
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 173 ASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 232
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 233 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 292
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 293 IINSVFDAGDDAICIKS 309
>gi|160886988|ref|ZP_02067991.1| hypothetical protein BACOVA_05002 [Bacteroides ovatus ATCC 8483]
gi|156107399|gb|EDO09144.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 436
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEQIQAVIDLAS-DNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGNGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + ++
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLNL 222
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSFPIKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ FG GDG ++ A AI+A V P G + T I LKS++ + +
Sbjct: 56 TITQFGGVGDGTTLNSEAFAKAIEALEKKGGGTLV-IPQGIWYTGPIVLKSNIHIYLQGG 114
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA--------- 117
A +L + YP + + + A+ A ++ ITG G +DG
Sbjct: 115 AIILFSDDFDLYPIVHTSFEGLDTRRCQSPISAKGAVNIAITGKGTIDGNGDAWRPVKKS 174
Query: 118 ----------------------MKFVVTKNEIKNVMVSWNHTGACSGDE--------CRP 147
+ + K+++ N N DE RP
Sbjct: 175 KLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGLKTDEEWEEVKDFLRP 234
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ F+ C NV + V + W LH + C+N I ++++ + + N DG+DIE N
Sbjct: 235 VLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQNGDGLDIESCKN 294
Query: 208 TVITRVQIDTGDDAICPKT 226
T++T D GDD IC K+
Sbjct: 295 TIVTNCSFDVGDDGICIKS 313
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 50/256 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA G+G T A SAI+ G + P G + T I LKS++ L++ + A +
Sbjct: 54 DFGAVGNGKDLCTEAFASAINTLS-GQGGGHLIVPAGVWFTGPIVLKSNIDLHLEKGAVI 112
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L P ++ YP + + + N +V ITG G +DG + K E K
Sbjct: 113 LFSPDVDLYPLVETVFEGLDTRRCQSPISGRNLENVAITGEGAIDGNGHFWRPLKRE-KV 171
Query: 130 VMVSWNHTGACSG--------------------------------DE-------CRPRLV 150
W T + G +E RP +V
Sbjct: 172 TESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLITEEEWQSVRHFLRPVMV 231
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ CRNV + V + W LH + C+N + ++ + N DG+D+E N +I
Sbjct: 232 SLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGDGLDLESCRNALI 291
Query: 211 TRVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 292 VNSTFDVGDDGICLKS 307
>gi|237721264|ref|ZP_04551745.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449060|gb|EEO54851.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 436
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLAS-NNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + ++
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLNL 222
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A +AI + Q+ PPG++LT + L SH TL
Sbjct: 48 HSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTL 107
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ + A +LG +P+ R+ ++ + TDV ITG G +DG
Sbjct: 108 FLQKGAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDG 167
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ L + + N+ L W +H
Sbjct: 168 QGSYW-------------WDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHP 214
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N I+ ++I ++PN DGID + S N I I +GDD I K+
Sbjct: 215 TYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSGDDCIAIKS 265
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIH 73
+++ DFGA DG A AI C ++ P G Y + + KS+V +++
Sbjct: 57 YNIADFGAVADGRMPCKGAFDKAITQCS-DQGGGRIIVPAGTYYMNGPLVFKSNVNIHLE 115
Query: 74 EDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK---- 119
+ A L EDY P +RW ++ A + ++ +TG G ++G K
Sbjct: 116 DGAILNFSSNQEDYLPAVITRWEGTELFNYSPLIYAYHVQNIALTGKGTINGNGSKKFSA 175
Query: 120 FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ +N K ++ G RP + GC NV + + +++ +W
Sbjct: 176 WADNQNIDKEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGITIKDSPFWV 235
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + C+N +RD+++ D + NNDG D E +N +I TGDDAI K+
Sbjct: 236 IHPIFCNNVIVRDVTV--DSHNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKSGRDNDA 293
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
P N+ + +K + + +GS + + +NI+I
Sbjct: 294 WRIGQPTENVVIRNCTFWSKINGVCIGSEISGGVRNVFIENISI 337
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 103/240 (42%), Gaps = 31/240 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V D GA G H D+ +A A +V PPGEY T I L+S++ L+I
Sbjct: 65 TVTDHGADPTG-HRDSTHAIAAAIATAARKGGGKVVVPPGEYHTGAIHLRSNIELHISRG 123
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM------- 118
ATL DY P +RW V A DV ITGGGV+DGQA
Sbjct: 124 ATLRFSQDPADYLPMVHTRWEGIELYNYSPFVYAHGVHDVAITGGGVLDGQANPQHWWPW 183
Query: 119 ------KFVVTKNEIKNVMVSWNHTGA------CSGDECRPRLVGFLGCRNVNVWNVRLR 166
+ V + E ++ + + G + + RP V F ++ V V L
Sbjct: 184 KTEPDGRGGVIETEHRDALHAMAERGVPVEQRRFTDSKLRPNFVQFYRSSDILVSGVTLT 243
Query: 167 EPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V +N + +++ + PN+DG++ E S N VI D GDD I K+
Sbjct: 244 NSPMWMIHPVLSENVIVDGVTLDSP-DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKS 302
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ FGAKGDG+ +T AI AI +V P G +LT I L S+V L +
Sbjct: 50 NISKFGAKGDGMTLNTKAINDAIKEVNQ-RGGGKVIIPEGTWLTGPIELLSNVNLYTERN 108
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITG----------------- 109
A +L E YP + + + A +A ++ ITG
Sbjct: 109 ALVLFTGDFEAYPIIPTSFEGLDTRRCQSPISARDAENIAITGYGIFDGNGDCWRPVKKE 168
Query: 110 -------------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CR 146
GGV+D Q + T +K M +N + DE R
Sbjct: 169 KLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWNEIRAWLR 228
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ F+ + V + V + WCLH + C++ + ++ + + + N D +D+E
Sbjct: 229 PVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYSQNGDALDLESCK 288
Query: 207 NTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 289 NALIINSVFDAGDDAICIKS 308
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 104/261 (39%), Gaps = 52/261 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGA+ DG +T AI AI A +V P G +LT I L S+V L +
Sbjct: 58 SIVAFGAQNDGKFLNTKAINEAIKAVH-AKGGGKVVIPEGLWLTGPIELLSNVNLYTERN 116
Query: 76 ATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
A +L E YP E + A NA ++ ITG G DG + K +
Sbjct: 117 AMILFTDDFEAYPIIETSFEGLETRRCQSPISARNAENIAITGYGTFDGSGDSWRPVKRD 176
Query: 127 IKNVMVSWNH------------------TGACSG-------------------DE----C 145
K + W+ GA G DE
Sbjct: 177 -KLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTDEEWDEIRPWL 235
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP L+ + + V + V + WCLH + C++ I ++ ++ + + N D +D+E
Sbjct: 236 RPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDLESC 295
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 296 KNALIINSLFDAGDDAICIKS 316
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 50/256 (19%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG++ +T AI AI +V P G +LT I L S+V L ++A +L
Sbjct: 65 FGAKGDGLYLNTKAINDAIKEVNQ-RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVL 123
Query: 80 GGPRIEDYP---------EESSRWYVVLAENATDVGITG--------------------- 109
E YP E + A NA ++ ITG
Sbjct: 124 FTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKGKLTA 183
Query: 110 ---------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRLV 150
GGV+D + + T +K M +N + DE RP L+
Sbjct: 184 SQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLL 243
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ + V + V + WCLH + C++ + ++ + + + N D ID+E N +I
Sbjct: 244 SIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALI 303
Query: 211 TRVQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 304 INSVFDAGDDAICIKS 319
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++++GA G + AI AI AC +V P GE+LT I LKS+V L + E
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAITACNQAGGG-RVVIPEGEWLTGPIHLKSNVNLYLAEG 105
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
A L Y P + W ++ A +V ITG G++ +
Sbjct: 106 AVLRFTDNPSHYLPAVMTSWEGMECYNYSPLIYAFECKNVAITGTGMLSPKMDCWKKWFA 165
Query: 117 -------AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
A++ + T K+V V A + RP L+ F C NV + + ++RE
Sbjct: 166 RPKAHMDALRKLYTMAS-KDVPVEKRQM-AVGENHLRPHLIHFNRCENVLLDSFKIRESP 223
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ C+ +R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 224 FWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 278
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRL+ F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|293369347|ref|ZP_06615932.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292635514|gb|EFF54021.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 436
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ D+G D T IQ+ ID N + P G YL+ + K L++ E A
Sbjct: 50 ITDYGVVNDSTLLQTEQIQAVIDLAS-DNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKA 108
Query: 77 TLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKNEI 127
L G I ++P +R ++ L + ++G G VDG ++
Sbjct: 109 ILKGSDDISNFPVIETRMEGQNLKYFSALINVDKVDGFTLSGKGKVDGNGERY------W 162
Query: 128 KNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
K+ + C+ DE RPRL+ NV V +VRL +W HI +CD+ + ++
Sbjct: 163 KSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLLNL 222
Query: 187 SIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
I+ P+ D IDI+ N ++ + DDAI K GP
Sbjct: 223 HIFSPSFPIKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGGKGP 269
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++++GA G + AI AI AC +V P GE+LT I LKS+V L + E
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAIAACNQAGGG-RVVIPEGEWLTGPIHLKSNVNLYLAEG 105
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
A L Y P + W ++ A +V ITG G++ +
Sbjct: 106 AVLRFTDNPSHYLPAVMTSWEGMECYNYSPLIYALECKNVAITGTGLLSPKMDCWKKWFA 165
Query: 117 -------AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
A++ + T K+V V A + RP L+ F C NV + + ++RE
Sbjct: 166 RPKAHMDALRKLYTMAS-KDVPVEKRQM-AVGENHLRPHLIHFNRCENVLLDSFKIRESP 223
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ C+ +R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 224 FWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 278
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++++GA G + AI AI AC +V P GE+LT I LKS+V L + E
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAIAACNQAGGG-RVVIPEGEWLTGPIHLKSNVNLYLAEG 105
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
A L Y P + W ++ A +V ITG G++ +
Sbjct: 106 AVLRFTDNPSHYLPAVMTSWEGMECYNYSPLIYALECKNVAITGTGLLSPKMDCWKKWFA 165
Query: 117 -------AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
A++ + T K+V V A + RP L+ F C NV + + ++RE
Sbjct: 166 RPKAHMDALRKLYTMAS-KDVPVEKRQM-AVGENHLRPHLIHFNRCENVLLDSFKIRESP 223
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ C+ +R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 224 FWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 278
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++++GA G + AI AI AC +V P GE+LT I LKS+V L + E
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAITACNQAGGG-RVVIPEGEWLTGPIHLKSNVNLYLAEG 105
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ--------- 116
A L Y P + W ++ A +V ITG G++ +
Sbjct: 106 AVLRFMDNPSHYLPAVMTSWEGMECYNYSPLIYAFECKNVAITGTGMLSPKMNCWKKWFA 165
Query: 117 -------AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
A++ + T K+V V A + RP L+ F C NV + + ++RE
Sbjct: 166 RPKAHMDALRKLYTMAS-KDVPVE-KRQMAVGENHLRPHLIHFNRCENVLLDSFKIRESP 223
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+W +H+ C+ +R++ + + NNDGID+E + N ++ D GDDA+ K
Sbjct: 224 FWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 278
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPP-GNKPCQVRF-PPGEYLTATIRLKSHVTLNIH 73
S+ +FGA GDG+ +TAA + A+ + + F P G +LT L SH TL +H
Sbjct: 69 SLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHFTLFLH 128
Query: 74 EDATLLGGPRIEDYP-------------EESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
DA +L DY + R+ +L N TDV ITG G +DGQ
Sbjct: 129 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 188
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W RP L+ + + + N+ W +H V
Sbjct: 189 PW-------------WGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 235
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N +I+ ++I PN DGI+ + NT I I +GDD I K+
Sbjct: 236 SNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKS 283
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFG KGDG+ +T A A+ + P G YLT I K ++ L++ ++
Sbjct: 50 SLPDFGGKGDGVTMNTEAFGKAMSELSK-KGGGHLDVPAGVYLTGMISFKDNIDLHLDKN 108
Query: 76 ATLLGGP------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV-VTKNEIK 128
A ++ P +IE+ ++ + A ++ ITG G++DG + V + ++
Sbjct: 109 AIIVLSPDKNDFIKIENGMKDDKATPGINASKRKNISITGEGIIDGNGEWWRPVKRGKVS 168
Query: 129 NVMVSWNHTGACSG---------------------------DECRPRLVGFLGCRNVNVW 161
+ WN A G + RP LV F C NV V
Sbjct: 169 DT--EWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVK 226
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
V L + + RC N I +++ +N N D IDI +I ID GDD
Sbjct: 227 GVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDG 286
Query: 222 ICPKTYT-------GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALV 262
IC K GP+ N+ ++ + +GS K +V
Sbjct: 287 ICMKAGAGAKGVEYGPVANVLIENNTVYNAHGGFVIGSEFSGGMKNIV 334
>gi|333901344|ref|YP_004475217.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
gi|333116609|gb|AEF23123.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
Length = 608
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 52/286 (18%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATI 62
+L+ +T + +V GAKGDG +TAAIQ IDAC + C+V P G + T +
Sbjct: 147 VLVQRTTAVPEVFNVEAQGAKGDGKTLNTAAIQKTIDAC---SLNCKVLIPAGVFKTGAL 203
Query: 63 RLKSHVTLNIHEDATLLGGPRIEDYPEES--SRWYVVLAENAT----------------D 104
LKS++TL I E ATLLG R EDYP + Y + A+ +
Sbjct: 204 YLKSNMTLEIAEGATLLGSERSEDYPLQGYIQYPYSTMVRPASLINALPRDPRQRQSFEN 263
Query: 105 VGITGGGVVDGQAMKF---------------------------VVTKNEIKNVMVSWNHT 137
+ I G G +DG K ++ +++++ +
Sbjct: 264 IRIVGKGTIDGNGWKRNDDSQDELGKPLPFYRASDNTRYREDGILARDQVEKAVARGIIV 323
Query: 138 GACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNN 197
G + R L+ RNV + PAY + + +N + +++ ++ N
Sbjct: 324 KDAYG-QMRSSLMTLRNVRNVFYGGFTVLNPAYHGIMNLETENVVMAG-TVHKTYDANNG 381
Query: 198 DGIDIEDSNNTVITRVQIDTGDDAI--CPKTYTGPLYNLTATDSWI 241
DGI+ +S ++ DTGDD + T G D+WI
Sbjct: 382 DGIEFANSKGAMVFNNFFDTGDDCVNFASGTGAGAAKQPPQEDAWI 427
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 114/278 (41%), Gaps = 47/278 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ FGA+ DG T AI+ AID A G R G +LT I LKS+V L + +
Sbjct: 52 EITRFGARADGKTDCTDAIRKAIDEAARVGGGRVMAR--EGAFLTGAIHLKSNVNLVVEK 109
Query: 75 DATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQA-------- 117
ATL P + YP +R+ + A N ++ ITGGG +DGQA
Sbjct: 110 GATLRFSPDPKLYPIVLTRFEGLECMNYSPFIYAFNQQNIAITGGGTLDGQASGEHWWPW 169
Query: 118 ---------------MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWN 162
+ + + K V V+ G G RP + C NV + +
Sbjct: 170 AGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFG--DGAWLRPMFIQPYRCTNVQIED 227
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V + + +H V C N R++ + + PNNDG D E S + +I DTGDD I
Sbjct: 228 VTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGCTFDTGDDCI 285
Query: 223 CPKT--------YTGPLYNLTATDSWIRTKSSAIKLGS 252
K+ P NL + ++ + +GS
Sbjct: 286 AIKSGRNADGRRLHSPSENLIVQNCVMKDGHGGVTMGS 323
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A Q AI + + PPG++LT + L SH TL
Sbjct: 51 HSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTL 110
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITG-GGVVDG 115
+ ++AT+LG ++P + ++ N TDV ITG G +DG
Sbjct: 111 FLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDG 170
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP ++ + ++ + N+ L W +H
Sbjct: 171 QGCYW-------------WDKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHP 217
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I+ ++I ++PN DGID + +N I I +GDD + K+
Sbjct: 218 IYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNIRIEDCYIVSGDDCVAIKS 268
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 40/261 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+A+ ++ P G++LT + L SH+TL
Sbjct: 38 HSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTL 97
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITG-GGVVD 114
+ AT++ R D P R ++ +N +DV ITG G++D
Sbjct: 98 FLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYR-SLIYGQNLSDVVITGDNGIID 156
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ V W+ S + RP ++ +G N+ + N+ W +H
Sbjct: 157 GQGS-------------VWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIH 203
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
V C N I+ +++ P GI + S + I I TG DAI K+
Sbjct: 204 PVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVA 263
Query: 227 YTGPLYNLTATDSWIRTKSSA 247
Y P N+ ++++ S A
Sbjct: 264 YGKPTSNVHIRGVYLQSSSGA 284
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAA-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRL+ F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG + D + T AIQ+AIDAC V PG Y + +KS V L++ + TLL
Sbjct: 58 FGLRNDTSVFSTHAIQAAIDACHQQGGGTVV-VAPGYYKIGALFVKSGVNLHLSKGTTLL 116
Query: 80 GGPRIEDYPEESSR-------W--YVVLAENATDVGITGGGVVDGQAM----KFVVTKNE 126
I+DYPE SR W V+ +A + +TG G +D + K+ + +
Sbjct: 117 ASENIQDYPEFPSRIAGIEMTWPSAVINIMDAENAALTGEGFIDCRGKVFWDKYWAMRED 176
Query: 127 IKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ + W C R R V +++ + + L +W I+ D+ + +
Sbjct: 177 YEKKNLRWIVDYDCK----RVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCSVSGL 232
Query: 187 SIYGDF--NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+I + + P+ DGIDI+ S N +I +D DD IC K
Sbjct: 233 TINNNVGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIK 273
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 114/288 (39%), Gaps = 44/288 (15%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFG KGDG+ +T A A+ + P G YLT I K ++ L++ ++
Sbjct: 50 SLPDFGGKGDGVTMNTEAFGKAMSELSK-KGGGHLDVPAGVYLTGMISFKDNIDLHLDKN 108
Query: 76 ATLLGGP------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV-VTKNEIK 128
A ++ P +IE+ ++ + A ++ ITG G++DG + V + ++
Sbjct: 109 AIIVLSPDKNDFIKIENGMKDDKATPGINASKRKNISITGEGIIDGNGEWWRPVKRGKVS 168
Query: 129 NVMVSWNHTGACSG---------------------------DECRPRLVGFLGCRNVNVW 161
+ WN A G + RP LV F C NV V
Sbjct: 169 DT--EWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVK 226
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
V L + + RC N I +++ +N N D IDI +I ID GDD
Sbjct: 227 GVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDG 286
Query: 222 ICPKTYT-------GPLYNLTATDSWIRTKSSAIKLGSASWFDFKALV 262
IC K GP+ N+ ++ + +GS K +V
Sbjct: 287 ICMKAGAGAKGVEYGPVANVLIENNTVYNAHGGFVIGSEFSGGMKNIV 334
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDGI +T A QSAI + + PPG++LT L SH TL
Sbjct: 46 HSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHFTL 105
Query: 71 NIHEDATLLGGPRIEDYPE-------------ESSRW-YVVLAENATDVGITG-GGVVDG 115
+ A +L ++P+ R+ ++ + TDV ITG G++DG
Sbjct: 106 FLDFGAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDG 165
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN RP L+ + + + + L W +H
Sbjct: 166 QGAYW-------------WNKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHP 212
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I ++PN DGI+ + +N I I +GDD I K+
Sbjct: 213 VYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKS 263
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 121/293 (41%), Gaps = 49/293 (16%)
Query: 20 FGAKGDGIHYDTAAIQSAID-ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
GA GI T I I+ A G + FP G YLTATI +KS++TL + A L
Sbjct: 27 LGADAKGIKSCTELINRTIEKAASEGGG--TIYFPVGTYLTATIHMKSNITLYLESGAVL 84
Query: 79 LGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF-------- 120
+ EDY P + RW ++ A +A +V I+G G +DG +K+
Sbjct: 85 RFSDKFEDYLPFVTLRWEGTVMKSLSPLIYAHSADNVTISGRGTLDGNGLKWWLWEFDTR 144
Query: 121 -VVTKN----------------EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNV 163
V+ +N K++ +S + + RP + F C N+ + NV
Sbjct: 145 KVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYECTNILIENV 204
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDD 220
++ +W ++ CDN I ++I + PN DGI+ N I+ I GDD
Sbjct: 205 KIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRISDCFISVGDD 264
Query: 221 AICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
I K+ Y N+T T+ + + + +GS K + N
Sbjct: 265 CITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEMSGGVKRVAISN 317
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ FGAK DG+ +T AI I+AC V P G +LT I LKS+V L +
Sbjct: 41 SITQFGAKSDGLTLNTEAINKTIEACSKQGGGV-VLIPQGIWLTGPIVLKSNVNLYVSRA 99
Query: 76 ATL------LGGPRIEDYPEESSRWYVVLAENATD---VGITGGGVVDGQA------MKF 120
A + P IE Y E + TD V ITG GV+DG K
Sbjct: 100 ALIQFTADKTQYPLIETYFEGKKAVRNQAPISGTDLENVAITGDGVIDGNGDIWRMVKKD 159
Query: 121 VVTKNEIKNV--------------------MVSWNHTG-----ACSGDECRPRLVGFLGC 155
VT+ E K + M + G A D RP +V C
Sbjct: 160 KVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAIKDYLRPNMVVLRNC 219
Query: 156 RNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQI 215
R V + N + W LH++ C+ + + + + N DG+DIE + + +
Sbjct: 220 RKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIESCSYVEVKNSTL 279
Query: 216 DTGDDAICPKT 226
D GDD IC K+
Sbjct: 280 DCGDDGICIKS 290
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+++DFG K DG+ +T AI AI A + +V P G +LT I L S+V L ++
Sbjct: 59 NIVDFGGKNDGVALNTQAINDAIKAVN-AHGGGKVIIPEGIWLTGPIELLSNVNLYTEKN 117
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MKF 120
A ++ YP + + + A NA ++ ITG GV DG K
Sbjct: 118 ALVVFTDDFSAYPIIKTSFEGLDTRRCQSPISARNAENIAITGYGVFDGSGDSWRPVKKG 177
Query: 121 VVTKNEIKNVMVS--------WNHT-GACSG---------------DE--------CRPR 148
+T ++ + ++ S W T GA G DE RP
Sbjct: 178 KLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDEEWNEIRPWLRPV 237
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ + + V + V + WCLH + C++ I ++ ++ + + N D +D+E N
Sbjct: 238 LLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDLESCKNA 297
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 298 LIINNIFDAGDDAICIKS 315
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 55 FGAKGDGLFLNTKAINDAIKDVNQRGGG--KVIIPEGVWLTGPIELLSNVNLYTEQNALV 112
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 113 LFTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGHGTFDGNGDCWRPVKKGKLT 172
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 173 ASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 232
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 233 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 292
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 293 IINSVFDAGDDAICIKS 309
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 49 QVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIEDYPEESSRWYVV---------LA 99
+V P G + T + L S +T + E + L+ P + Y SRW V
Sbjct: 36 EVLIPSGTWHTGPVTLASGITFRLAEGSRLVFIPDEDLYVPVYSRWEGVSCWCMHPCLFI 95
Query: 100 ENATDVGITGGGVVDGQAMKF-----------VVTKNEIKNVMVSWN-----HTGACSGD 143
+ DV +TG GV+DG + + + ++ + + N G G
Sbjct: 96 SESHDVTVTGTGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPGYADQPGGGGGR 155
Query: 144 EC---RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGI 200
+C RP L+ L V V V L +W LH V RD+ I + PN DGI
Sbjct: 156 QCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGI 215
Query: 201 DIEDSNNTVITRVQIDTGDDAICPKTYTG--------PLYNLTATDSWIRTKSSAIKLGS 252
DI+ + ++T +D GDD I K+ +G P N+ + +R+ I +GS
Sbjct: 216 DIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHGGIVIGS 275
Query: 253 ASWFDFKALVFDN 265
+ LV ++
Sbjct: 276 ETAAGISGLVAED 288
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ +FGA DG +T AIQ+AIDAC G K V P G ++T I LKS +TL I +
Sbjct: 59 EITEFGAVADGQTINTEAIQAAIDACTAGGK---VVVPKGTFVTGAIFLKSRMTLYIEQG 115
Query: 76 ATLLGGPRIEDYPEESSRW-------YVVL------AENATD-VGITGGGVVDGQAMKFV 121
LLG +DYP RW Y L AE + + I G G +D M
Sbjct: 116 GVLLGSDNPDDYPVMQYRWEGREQLCYASLINTKDPAEGRLEQIIIEGEGKIDANGMALF 175
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
H R R V V + ++ +R+ WC+H++ C+
Sbjct: 176 --------------HKEMAEKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGV 221
Query: 182 FIRDMSIYGDFNTP--------NNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I+ + N DG++ + +++ I I + DD I K+
Sbjct: 222 SVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKS 274
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L L +T + V + GAK +G +T I S ID G + FP G YL
Sbjct: 8 LAFLCLCATAILRAERVDMLKAGAKANGKALNTKLINSTIDRLNRGGGG-TLFFPAGTYL 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 67 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 126
Query: 109 GGGVVDGQA----MKFVVTKNEIKNVMV-----------SWNHTGACSGDE--------- 144
G G +DGQ M+F ++K+ + + N T A +
Sbjct: 127 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DGI+
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGIN 245
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 246 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSE 305
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 306 MSGSVRKVTISN 317
>gi|388545356|ref|ZP_10148639.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
gi|388276676|gb|EIK96255.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
Length = 608
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 48/252 (19%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ V +GA GDG H DTAAIQ AIDAC G K V P G Y + + LKS++TL I
Sbjct: 155 VFDVRRYGAIGDGEHLDTAAIQRAIDACTRGGK---VLLPKGVYKSGALYLKSNMTLEIA 211
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLA----------------ENATDVGITGGGVVDGQA 117
+ ATLLG R EDYP + Y + ++ I G G++DG
Sbjct: 212 KGATLLGSERAEDYPLKGYAQYSYSTTQRPASLINAVARDPHQPLENIRIVGRGILDGNG 271
Query: 118 MKF---------------------------VVTKNEIKNVMVSWNHTGACSGDECRPRLV 150
K V+ K ++ + S G + R L+
Sbjct: 272 WKRSADVVDPSGHAMAVYAASNNARYQQDGVLAKAQVDAAVASGMDVTDAYG-QMRSSLI 330
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
NV + L PA+ + + N + + SI ++ N DG++ +S ++
Sbjct: 331 TLSHVNNVFYGGLTLVNPAFHGIMNLETRNVVLANTSIR-TYDANNGDGVEFSNSRGAMV 389
Query: 211 TRVQIDTGDDAI 222
TGDD +
Sbjct: 390 FNNFFATGDDCV 401
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 110/273 (40%), Gaps = 38/273 (13%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFG KGDG ++ A A A N ++ P G + + I + S TL + E + +
Sbjct: 8 DFGGKGDGKFNNSNAFALAF-AEISRNGGGKLTVPKGVWASGPIEIPSDTTLELEEGSEI 66
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
P Y +RW +VL+ + +V ITG G ++G + K K
Sbjct: 67 SFIPDPNLYTPVFTRWEGVECFAMHPLVLSSHTKNVRITGKGTLNGNGETWWNLKKAKKE 126
Query: 130 VMVSW-----------------NHTGACSGDE---CRPRLVGFLGCRNVNVWNVRLREPA 169
S N G G E RP L+ NV+V + +++
Sbjct: 127 RGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAENVSVEGIEIKDSP 186
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+W +H + N +R + I + PN DGID++ N VI + GDD IC K+ +G
Sbjct: 187 FWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGDDGICIKSGSG 246
Query: 230 --------PLYNLTATDSWIRTKSSAIKLGSAS 254
P N+ + +R I +GS +
Sbjct: 247 PDGIRCAKPTVNVEIRNCTVRNAHGGIVIGSET 279
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGAKGDG +T AI AI A +V P G +LT I L S+V L ++
Sbjct: 59 SILQFGAKGDGTTLNTKAINDAIKAVN-AKGGGKVVIPEGLWLTGPIELLSNVNLYTEKN 117
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF------ 120
A ++ YP + + + A N ++ ITG GV DG +
Sbjct: 118 ALVVFTDDFNAYPILETSFEGLNTRRCQSPISARNTENIAITGHGVFDGSGDSWRPVKKS 177
Query: 121 ---------------VVTKN-------EIKNVMV--SWNHTGACSGDE--------CRPR 148
VV K+ +K + ++N+ DE RP
Sbjct: 178 KLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWNEIRPWLRPV 237
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ + + V + V + WCLH + C++ I + ++ + + N D +D+E N
Sbjct: 238 LLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNA 297
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 298 LIINNIFDAGDDAICIKS 315
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ ++GAK DGI +T AI AI C V P G +LT I+L+++V L++ ++
Sbjct: 47 NITNYGAKPDGISLNTDAINKAISDCSKKGGGV-VLVPNGYWLTGPIKLQNNVNLHLKKN 105
Query: 76 ATLLGGPRIEDYP--------EESSR-WYVVLAENATDVGITGGGVVDGQ--AMKFV--- 121
A L +DY + S+R ++ N ++V ITG G++DG A + V
Sbjct: 106 ALLQFSKNFDDYKLVEGVYEGKPSARNESPIMGVNVSNVAITGQGIIDGNGDAWRMVRTS 165
Query: 122 -VTKNEIKNVMVS-----------W-----NHTGACSG------------------DECR 146
+T+ E K + W N G D R
Sbjct: 166 DLTEYEWKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPGVKLSDFEPVKDFLR 225
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P L+ C+NV + V + W +H + C+N +R + I N DG DIE
Sbjct: 226 PNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCK 285
Query: 207 NTVITRVQIDTGDDAICPKT 226
N ++ D GDDAIC K+
Sbjct: 286 NVLVEHCIFDVGDDAICIKS 305
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T + Q+AI ++ PPG +LT + L SH+TL
Sbjct: 37 HSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNLTSHLTL 96
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVV--LAENATDVGITGG---GVVDGQAMKFVVTKN 125
+ + A +LG ++ S + ++ L + + GG +++G ++ VV
Sbjct: 97 FLEKGAVILGS-------QDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVITG 149
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ + V W+ + S + RP LV F+ + V N+ + +H V C N
Sbjct: 150 DNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNV 209
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLTATD 238
+++MS+ +P GI + SNN I I G DAI K+ G Y+ D
Sbjct: 210 LVQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRD 269
Query: 239 SWIR------TKSSAIKLGS 252
IR + S+I GS
Sbjct: 270 VHIRRVHLQSSSGSSIAFGS 289
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +GA +T A+ AI+AC +V P GE+ T + LKS+V L + E A
Sbjct: 52 ITKYGASHADKKKNTRALAKAIEACNRAGGG-RVVVPAGEWFTGPVHLKSNVNLYLEEGA 110
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVV----DGQAMKFVV 122
L DY P + W +V A +V ITG GV+ D + F
Sbjct: 111 VLRFSDDPADYLPAVMTSWEGLECYNYSPLVYAFECENVAITGKGVLAPDMDTWKIWFKR 170
Query: 123 TKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
+ + + ++ A + RP L+ F C++V + ++R+ +W
Sbjct: 171 PQAHLHALAQLYSMASTDVPVELRQMARGENHLRPHLIHFNRCKHVLLDGFKIRQSPFWT 230
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H+ C++ +R++ + + NNDGID E S N ++ D GDDA+ K+
Sbjct: 231 IHLYMCNSGVVRNLDVQA--HGHNNDGIDFEMSRNFLVEHCTFDQGDDAVVIKSGRNQDA 288
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ IR + +GS
Sbjct: 289 WRLNTPCENIVVRHCAIRKGHVLLGIGS 316
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 103/263 (39%), Gaps = 39/263 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNK--PCQVRFPPGEYLTATIRLKSHVTLNIH 73
S+ +FGA GDG+ +T A + A+ + P G +LT L SH TL +H
Sbjct: 68 SLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHFTLFLH 127
Query: 74 EDATLLGGPRIEDYP-------------EESSRWYVVL-AENATDVGITG-GGVVDGQAM 118
DA +L DY + R+ +L N TDV ITG G +DGQ
Sbjct: 128 RDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTIDGQGE 187
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W RP L+ + + + N+ W +H V
Sbjct: 188 PW-------------WGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPLYNLT 235
N FI+ ++I PN DGI+ + NT I I +GDD I K+ G Y +
Sbjct: 235 RNIFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMP 294
Query: 236 ATDSWIRT------KSSAIKLGS 252
IR S+ I LGS
Sbjct: 295 TKQLLIRRLTCISPDSAVIALGS 317
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 65 FGAKGDGLFLNTKAINDAIKDVNQHGGG--KVIIPEGIWLTGPIELLSNVNLYTKQNALV 122
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 123 LFTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGHGTFDGNGDCWRPVKKGKLT 182
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 183 ASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 242
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 243 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 302
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 303 IINSVFDAGDDAICIKS 319
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 65 FGAKGDGLFLNTKAINDAIKDVNQRGGG--KVIIPEGIWLTGPIELLSNVNLYTEQNALV 122
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 123 LFTGDFEAYPIIDTSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKEKLT 182
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 183 ASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 242
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 243 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 302
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 303 IINSVFDAGDDAICIKS 319
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 55 FGAKGDGLFLNTKAINDAIKDVNQHGGG--KVIIPEGIWLTGPIELLSNVNLYTEQNALV 112
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 113 LFTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGHGTFDGNGDCWRPVKKGKLT 172
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 173 ASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 232
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 233 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 292
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 293 IINSVFDAGDDAICIKS 309
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L L +T + V + GAK +G +T I S ID G + FP G YL
Sbjct: 8 LAFLCLCATAILRAERVDMLKAGAKANGKALNTKLINSTIDRLNRGGGG-TLFFPAGTYL 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 67 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 126
Query: 109 GGGVVDGQA----MKFVVTKNEIKNVMV-----------SWNHTGACSGDE--------- 144
G G +DGQ M+F ++K+ + + N T A +
Sbjct: 127 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DGI+
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGIN 245
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 246 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSE 305
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 306 MSGSVRKVTISN 317
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 708 YNIKEYGVKGNG-YSETATLQRIINEAV-HNGGGTIVIPAGEYLSGALFFPRGVDLRIEK 765
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 766 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 817
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRL+ F C + +++ A WCLH++ + I
Sbjct: 818 ------VEWKKI--PFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 869
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 870 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 910
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 116/296 (39%), Gaps = 46/296 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ + DFGAK D AI AI C N V P G + T I LKS+V +
Sbjct: 46 QTYLITDFGAKPDTPDAPCHEAINQAIVTCCL-NGGGTVVVPKGTFYTGPITLKSNVNFH 104
Query: 72 IHEDATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK-- 119
+ E A L + +P +RW ++ A T++ ITG G +DGQ
Sbjct: 105 VEEGAVLKFSTDQSLYFPGVITRWEGIDCYNARPLIYAYGETNIAITGKGTIDGQGSNET 164
Query: 120 ---------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRN 157
V +N + ++ + T D RP+L+ C
Sbjct: 165 WWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCNT 224
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
V + +V L +W +H + C++ +R + +Y PN DG D E N +I DT
Sbjct: 225 VLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDT 282
Query: 218 GDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD I K+ + P N+ +++ + +GS ++ L +N
Sbjct: 283 GDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVEN 338
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ--VRFPPGEYLTATIRLKSHVTLNIH 73
SV FG GDG +TAA +A+ + P + PPG +LT L SH+TL +
Sbjct: 47 SVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTSHMTLFLS 106
Query: 74 EDATLLGG------PRIEDYPE-------ESSRWYVVLAENA-TDVGITGG-GVVDGQAM 118
A + P I+ P R+ ++ N DV ITG G +DGQ
Sbjct: 107 RGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTIDGQGS 166
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
V W+ + RP L+ + +V V N+ R+ +W +H V C
Sbjct: 167 -------------VWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYC 213
Query: 179 DNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
N IR+++I ++PN DGID + S+N I I TGDD + K+
Sbjct: 214 SNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKS 261
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S++ FGAK DG +T AI AI A +V P G +LT I L S+V L+ ++
Sbjct: 77 SILQFGAKSDGTTLNTKAINDAIKAVN-AKGGGKVVIPEGLWLTGPIELLSNVNLHTEKN 135
Query: 76 ATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDG--------QAM 118
A ++ YP + + + A NA ++ ITG GV DG +
Sbjct: 136 ALVVFTDDFNAYPILETSFEGLNTRRCQSPISARNAENIAITGYGVFDGSGDSWRPVKKS 195
Query: 119 KFVV--------------------TKNEIKNVMV--SWNHTGACSGDE--------CRPR 148
K T +K + ++N+ DE RP
Sbjct: 196 KLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWNEIRPWLRPV 255
Query: 149 LVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNT 208
L+ + + V + V + WCLH + C++ I + ++ + + N D +D+E N
Sbjct: 256 LLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNA 315
Query: 209 VITRVQIDTGDDAICPKT 226
+I D GDDAIC K+
Sbjct: 316 LIINNIFDAGDDAICIKS 333
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKS 66
+T H S+ DFGA GDG +T A Q+A+ Q+ PPG +LT + L S
Sbjct: 37 STRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSLTS 96
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
H+TL + A ++ ++ S W VV + G + G+ K ++ N
Sbjct: 97 HLTLFLENGAVIVAS-------QDPSHWEVVDPLPSYGRGTD----LPGKRYKSLINGNM 145
Query: 127 IKNVMVS-------------WNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWC 172
+ +V+V+ W+ + S RP L+ FL +NV V N+ L PAY
Sbjct: 146 LHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAY-T 204
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + + +I + + +P GI + SN I I+ G DAI K+
Sbjct: 205 IHSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYG 264
Query: 227 --YTGPLYNLTATDSWIRTKS-SAIKLGSASWFDFKALVFDN 265
Y+ P N+ + ++R S S+I GS +V DN
Sbjct: 265 IAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDN 306
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ ++G KG+G + +TA +Q I+ N + P GEYL+ + V L I +
Sbjct: 91 YNIKEYGVKGNG-YSETATLQRIINEAAH-NGGGTIVIPAGEYLSGALFFPRGVDLRIEK 148
Query: 75 DATLLGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
+A L+ ++P E+ R + +++ V + G GV+DG+
Sbjct: 149 NAKLISTVDPNEFPVIPTRFEGIEKRWRCAFLNFDHSDGVKVYGEGVIDGKG-------- 200
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
V W G+ RPRL+ F C + +++ A WCLH++ + I
Sbjct: 201 ------VEWKKIPF--GNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDG 252
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ I P++DGIDI+ SN+ +IT +I+ DD I K+
Sbjct: 253 IDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKS 293
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 103/256 (40%), Gaps = 50/256 (19%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG+ +T AI AI +V P G +LT I L S+V L ++A +L
Sbjct: 65 FGAKGDGLFLNTKAINDAIKEVNQ-RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVL 123
Query: 80 GGPRIEDYP---------EESSRWYVVLAENATDVGITG--------------------- 109
E YP E + A NA ++ ITG
Sbjct: 124 FTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKGKLTA 183
Query: 110 ---------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRLV 150
GGV+D + + T +K M +N + DE RP L+
Sbjct: 184 SQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLL 243
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ + V + V + WCLH + C++ + ++ + + + N D ID+E N +I
Sbjct: 244 SIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALI 303
Query: 211 TRVQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 304 INSVFDAGDDAICIKS 319
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 98/247 (39%), Gaps = 35/247 (14%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
S+ DFG KGDG+ +T A A+ + P G YLT I K ++ L++ ++
Sbjct: 50 SLPDFGGKGDGVTMNTEAFGKAMSELSK-KGGGHLDVPAGVYLTGMISFKDNIDLHLDKN 108
Query: 76 ATLLGGP------RIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
A ++ P +IE+ ++ + A ++ ITG G++DG + K K
Sbjct: 109 AIIVLSPDKNDFIKIENGMKDDKATPGINASKRKNISITGEGIIDGNGEWWRPVKRG-KV 167
Query: 130 VMVSWNHTGACSG---------------------------DECRPRLVGFLGCRNVNVWN 162
WN A G + RP LV F C NV V
Sbjct: 168 SDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKG 227
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
V L + + RC N I +++ +N N D IDI +I ID GDD I
Sbjct: 228 VTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIINNVIDAGDDGI 287
Query: 223 CPKTYTG 229
C K G
Sbjct: 288 CMKAGAG 294
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 108/257 (42%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 65 FGAKGDGLFLNTKAINDAIKDVNQRGGG--KVIIPEGVWLTGPIELLSNVNLYTEQNALV 122
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITGGGVVDGQA------MKFVVT 123
L E YP E + A NA ++ ITG G DG K +T
Sbjct: 123 LFTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGHGTFDGNGDCWRPVKKGKLT 182
Query: 124 KNEIKNVMVS----------WNHTG-------AC---------SGDE--------CRPRL 149
++ K ++ S W T AC + DE RP L
Sbjct: 183 ASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 242
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 243 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 302
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 303 IINSVFDAGDDAICIKS 319
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 31/239 (12%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V+ +GA GI T AIQSAID K +V P G ++T + LKSHV L++HE
Sbjct: 55 NVVHYGADAQGIELSTEAIQSAIDDAHR-LKGGRVLIPEGTFVTGALELKSHVELHLHEK 113
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMKF----- 120
A + +DY P +R+ ++ A +A ++ ITG G +DG+ +
Sbjct: 114 AYVSFSQNPKDYLPLVLTRYEGVELYNYSPLIYAHHAENIAITGAGTLDGRGDEHHWWPW 173
Query: 121 ------VVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVWNVRLRE 167
++ + ++ G R + C+ V + V +++
Sbjct: 174 KYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQVLIEGVTVKD 233
Query: 168 PAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
W +H V ++ +R + I G + PN DG++ E N +I D GDD I K+
Sbjct: 234 SPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKS 290
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +G+K DGI +T AI AI C V P G +LT + L+S+V L++
Sbjct: 271 NIARYGSKADGITLNTQAINQAITRCSQAGG-GTVLIPEGLWLTGPLVLRSNVNLHLASG 329
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDG----------- 115
A L +DYP ++ W + + +V ITG GV+DG
Sbjct: 330 ALLQFSRNRDDYPIVATTWEGQDAYRCQAPIWGVDLVNVAITGSGVIDGGGEVWRAVKKS 389
Query: 116 -----QAMKFVVTKNEIKNVMVSW-----NHTGACSGDECR------------------P 147
Q K V + + + +W + GA S D R P
Sbjct: 390 KQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKTPAELTEIRDFLRP 449
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V C+ V + V + W LH + C++ +R +++ + N DG+D+E N
Sbjct: 450 NMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLESCRN 509
Query: 208 TVITRVQIDTGDDAICPKT 226
++ DTGDD I K+
Sbjct: 510 GLLENCTFDTGDDGITIKS 528
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 11 HIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTL 70
++I +D A GDG + AIQ AID + +V F PG YLT +I LKS VTL
Sbjct: 3 KVNIELAVD--AAGDGRTDCSNAIQRAIDTVS-ASGGGKVYFRPGIYLTGSIFLKSGVTL 59
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVVLAE---------NATDVGITGGGVVDGQAM--- 118
I E L G YP+ +R + E +V ITG G +DGQ
Sbjct: 60 EIGEGVELRGIIDETAYPDIWTRVAGIEMEWPAGLINVIGQANVTITGKGTIDGQGFYWW 119
Query: 119 -------KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+ + E + W A D RPR + V + ++ LR +W
Sbjct: 120 NKYWGEDRLGGMRKEYTGKGLRW----AVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFW 175
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+HI + ++ + I D P+ DGID++ S N +I I+ DD IC K
Sbjct: 176 NVHICYSTDVYVSGLVIK-DNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKA 229
>gi|329955387|ref|ZP_08296295.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328525790|gb|EGF52814.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 432
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+++ D+G D T IQ+ ID N + P G +L+ +I K L + E
Sbjct: 47 YTITDYGVVNDSTILQTEKIQAVIDRAAR-NGGGVIVVPKGTFLSGSIFFKPRTHLYMEE 105
Query: 75 DATLLGGPRIEDYP-------EESSRWYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
+ L G I ++ +S +++ L A+ I+G G ++G ++
Sbjct: 106 GSVLKGSDDISNFAIVNTRIEGQSLKYFAALVNADKVNGFTISGKGTINGNGHRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + C+ DE RPRL+ +V + VRL +W HI RC+N +
Sbjct: 161 -WKSFWLRRQVIPKCTNMDELRPRLLYISNSNDVQISGVRLMNSPFWTTHIYRCNNIKLL 219
Query: 185 DMSIY---GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I+ P++D IDI+ +N ++ + DDA+ K GP
Sbjct: 220 NLHIFAPAAPVKAPSSDAIDIDVCSNVLVKNCYMSVNDDAVALKGGKGP 268
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 46/299 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ + DFGAK D AI AI C N V P G + T I LKS+V +
Sbjct: 46 QTYLITDFGAKPDTPDAPCHEAINQAIVTCCL-NGGGTVIVPKGTFYTGPITLKSNVNFH 104
Query: 72 IHEDATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK-- 119
+ E A L + +P +RW ++ A T++ ITG G +DGQ
Sbjct: 105 VEEGAILKFSTDQSLYFPGVITRWEGLDCYNARPLIYAYGETNIAITGKGTIDGQGSNDT 164
Query: 120 ---------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRN 157
V +N + ++ + T D RP+L+ C
Sbjct: 165 WWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRPQLINLYSCNT 224
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
V + +V L +W +H + C++ +R + +Y PN DG D E N +I DT
Sbjct: 225 VLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDT 282
Query: 218 GDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
GDD I K+ + P N+ +++ + +GS ++ L +N +
Sbjct: 283 GDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVENCKM 341
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 116/296 (39%), Gaps = 46/296 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ + DFGAK D AI AI C N V P G + T I LKS+V +
Sbjct: 46 QTYLITDFGAKPDTPDAPCHEAINQAIVTCCL-NGGGTVVVPKGTFYTGPITLKSNVNFH 104
Query: 72 IHEDATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK-- 119
+ E A L + +P +RW ++ A T++ ITG G +DGQ
Sbjct: 105 VEEGAVLRFSTDQSLYFPGVITRWEGIDCYNAHPLIYAYGETNIAITGKGTIDGQGSNET 164
Query: 120 ---------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRN 157
V +N + ++ + T D RP+L+ C
Sbjct: 165 WWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCNT 224
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
V + +V L +W +H + C++ +R + +Y PN DG D E N +I DT
Sbjct: 225 VLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDT 282
Query: 218 GDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD I K+ + P N+ +++ + +GS ++ L +N
Sbjct: 283 GDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGGYRNLYVEN 338
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +FGA DG +T AIQ+AIDAC G K V P G ++T I LKS +TL + +
Sbjct: 103 ITEFGAVADGQTLNTEAIQAAIDACTAGGK---VVVPKGTFVTGAIFLKSRMTLYVEQGG 159
Query: 77 TLLGGPRIEDYPEESSRW-------YVVL------AENATD-VGITGGGVVDGQAMKFVV 122
LLG +DYP RW Y L AE + + I G G +D M
Sbjct: 160 VLLGSDNPDDYPVMQYRWEGREQLCYASLINTKDPAEGRLEQIIIEGEGKIDANGMALF- 218
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
H R R V V + ++ +R+ WC+H++ C+
Sbjct: 219 -------------HKEMAEKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVS 265
Query: 183 IRDMSIYGDFNTP--------NNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I+ + N DG++ + +++ I I + DD I K+
Sbjct: 266 VNHIEIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKS 317
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 103/256 (40%), Gaps = 50/256 (19%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG+ +T AI AI +V P G +LT I L S+V L ++A +L
Sbjct: 65 FGAKGDGLFLNTKAINDAIKEVNQ-RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVL 123
Query: 80 GGPRIEDYP---------EESSRWYVVLAENATDVGITG--------------------- 109
E YP E + A NA ++ ITG
Sbjct: 124 FTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKGKLTA 183
Query: 110 ---------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRLV 150
GGV+D + + T +K M +N + DE RP L+
Sbjct: 184 SQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLL 243
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ + V + V + WCLH + C++ + ++ + + + N D ID+E N +I
Sbjct: 244 SIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQNGDAIDLESCKNALI 303
Query: 211 TRVQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 304 INSVFDAGDDAICIKS 319
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
GAKGDG+ DT AIQ AID C V G++L+ + +KS VTL++ A LL
Sbjct: 28 MGAKGDGVTKDTEAIQKAIDTC------TVVTLSGGKFLSGPLEIKSGVTLDVETGAMLL 81
Query: 80 GGPRIEDYPEES-SRWYVVLA----ENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSW 134
G DY + R VL NA +V ITGGG +DGQ V W
Sbjct: 82 GSTDRADYKAATLMRQPTVLPFLHIVNADNVKITGGGTIDGQG-------------KVWW 128
Query: 135 NH------TGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
++ G D RP + ++V V N+ ++ +W + D + +
Sbjct: 129 DYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHLRV 188
Query: 189 YG-DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
PN DGID S++ I GDD I K+
Sbjct: 189 LAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKS 227
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 32/233 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP----GNKPCQVRFPPGEYLTATIRLKSHV 68
H S+ +FG GDG +TAA ++A++ G + P G +LTA L SH
Sbjct: 71 HTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTSHF 130
Query: 69 TLNIHEDATLLGGPRIEDYP-------------EESSRWYVVLA-ENATDVGITGG-GVV 113
TL +H DA +L I ++P R+ +++ N TDV ITG G +
Sbjct: 131 TLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITGNNGTI 190
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCL 173
DGQ + W+ + R L+ + + + NV L W +
Sbjct: 191 DGQGATW-------------WSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNI 237
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
H V N I+ ++I +PN DGI+ + + I + +GDD + K+
Sbjct: 238 HPVYSKNIVIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKS 290
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
++ V FGAKGDG+ DTAAIQ+AI ACP K V P GEYL + LKS +TL +
Sbjct: 79 YLLDVTAFGAKGDGVTMDTAAIQAAICACP---KDGTVYLPKGEYLVTPLFLKSDMTLWL 135
Query: 73 HEDATLLGGPRIEDYP---------EESSRW--------------YVVLAENATDVGITG 109
+ A +LG YP +E S + ++ A +A ++ I G
Sbjct: 136 DKGAVILGDTDRNHYPVLPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLDIIG 195
Query: 110 GGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
G +DG A W RP + + C+ V V NVR++
Sbjct: 196 PGTIDGNAGN------------SDWWVNAKVKRGAWRPFAMYLVRCQKVRVQNVRVQNSP 243
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
W +H D+ ++ I+ ++PN DG+D E N ++ I GDD C +G
Sbjct: 244 CWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDD--CMAIKSG 301
Query: 230 PLY 232
Y
Sbjct: 302 KFY 304
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 129/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L L +T + V + GAK +G +T I S ID G + FP G YL
Sbjct: 8 LAFLCLCATAILRAERVDMLKAGAKANGKALNTKLINSTIDRLNRGGGG-TLFFPAGTYL 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 67 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 126
Query: 109 GGGVVDGQA----MKFVVTKNEIKNVMV-----------SWNHTGACSGDE--------- 144
G G +DGQ M+F ++K+ + + N T A +
Sbjct: 127 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DGI+
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGIN 245
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + +GS
Sbjct: 246 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHGGVVIGSE 305
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 306 MSGSVRKVTISN 317
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 46/296 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+ + DFGAK D AI AI C V P G + T I LKS+V +
Sbjct: 46 QTYHITDFGAKADNESVPCHEAINQAILQCSLTGGG-TVIVPKGTFYTGPITLKSNVNFH 104
Query: 72 IHEDATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQ----- 116
+ E A L + +P +RW ++ A T++ ITG G +DGQ
Sbjct: 105 LEEGAVLKFLTDQSLYFPGVITRWEGLDCYNARPLIYAYGETNIAITGKGTIDGQGSNDT 164
Query: 117 ------AMKF------VVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRN 157
A K+ V +N + ++ + T D RP+L+ C
Sbjct: 165 WWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCHT 224
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
+ + +V L +W +H + C++ +R ++I+ PN DG D E N +I DT
Sbjct: 225 ILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIENCTFDT 282
Query: 218 GDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD I K+ + P N+ + ++ + +GS ++ L +N
Sbjct: 283 GDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGYRNLFVEN 338
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 117/268 (43%), Gaps = 43/268 (16%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKP--CQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 37 HSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHLTL 96
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITG-GGVVD 114
+ + A +LG R + P + R ++ + TDV +TG G +D
Sbjct: 97 FLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYR-SLINGDMLTDVVVTGDNGTID 155
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWCL 173
GQ V W+ + S + RP LV F V V N+ L PAY +
Sbjct: 156 GQGS-------------VWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAY-NI 201
Query: 174 HIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGP 230
H V C N ++++S+ +P GI + SNN I I G DAI K+ G
Sbjct: 202 HPVYCSNVLVQNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGI 261
Query: 231 LYNLTATDSWIR------TKSSAIKLGS 252
Y+ D IR + S+I GS
Sbjct: 262 AYDRPTQDVHIRRVYLQSSSGSSIAFGS 289
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 103/256 (40%), Gaps = 50/256 (19%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FGAKGDG+ +T AI AI +V P G +LT I L S+V L ++A +L
Sbjct: 55 FGAKGDGLFLNTKAINDAIKEVNQ-RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVL 113
Query: 80 GGPRIEDYP---------EESSRWYVVLAENATDVGITG--------------------- 109
E YP E + A NA ++ ITG
Sbjct: 114 FTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKGKLTA 173
Query: 110 ---------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRLV 150
GGV+D + + T +K M +N + DE RP L+
Sbjct: 174 SQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLL 233
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ + V + V + WCLH + C++ + ++ + + + N D ID+E N +I
Sbjct: 234 SIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALI 293
Query: 211 TRVQIDTGDDAICPKT 226
D GDDAIC K+
Sbjct: 294 INSVFDAGDDAICIKS 309
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 105/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L ++A +
Sbjct: 65 FGAKGDGLFLNTKAINDAIKDVNQRGGG--KVIIPEGIWLTGPIELLSNVNLYTEQNALV 122
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ +TG
Sbjct: 123 LFTGDFEAYPIIDTSFEGLETRRCQSPISARNAENIAVTGYGTFDGNGDCWRPVKKEKLT 182
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 183 ASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVL 242
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + V + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 243 LSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 302
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 303 IINSVFDAGDDAICIKS 319
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 30/268 (11%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ + DFG GDG +T A + A+ A Q+ P G +LTA L SH+TL +
Sbjct: 84 YELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHMTLFL 143
Query: 73 HEDATLLGGPRIED---------YPEESSRWYVVLAENATDVGITG-----GGVVDGQAM 118
E + +LG P + + + W ++ A + G G ++ GQ +
Sbjct: 144 AEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNL 203
Query: 119 KFVVTKNEIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
K VV ++ V W + RP L+ + +++ V N+ L+ +W H
Sbjct: 204 KDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFH 263
Query: 175 IVRCDNTFIRDMSIYGDFNT-PNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------- 226
C N + +++I ++ PN DGID + + +I I GDDAI K+
Sbjct: 264 PYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGI 323
Query: 227 -YTGPLYNLTATDSWIRTKSSA-IKLGS 252
Y P N+ + R+ SA I +GS
Sbjct: 324 AYGRPSRNIVIRNVMARSLVSAGISIGS 351
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 116/296 (39%), Gaps = 46/296 (15%)
Query: 13 HIHSVIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN 71
+++ DFGAK D AI AI C V P G + T I LKS+V +
Sbjct: 46 QTYNITDFGAKPDNETEPCHEAINQAILKCSLAGGG-TVVVPQGTFYTGPITLKSNVNFH 104
Query: 72 IHEDATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAMK-- 119
+ E A L Y P +RW ++ A T++ ITG G +DGQ
Sbjct: 105 LQEGAILKFLTNQSLYFPGVITRWEGLDCYNARPLIYAYGETNIAITGKGTIDGQGSNET 164
Query: 120 ---------------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRN 157
V +N + ++ + T D RP+L+ C
Sbjct: 165 WWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQLINLYACST 224
Query: 158 VNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDT 217
V + +V L +W +H + C++ +R ++I+ PN DG D E N +I DT
Sbjct: 225 VLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIENCTFDT 282
Query: 218 GDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
GDD I K+ + P N+ + ++ + +GS ++ L +N
Sbjct: 283 GDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGGYRNLFVEN 338
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 126/310 (40%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L +TT + V + GAK +G +T I S ID G + FP G YLT
Sbjct: 10 FLCFCATTVLRAERVDMLKAGAKANGKALNTKLINSTIDRLNRGGGG-TLFFPAGTYLTG 68
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+I LKS++TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 69 SIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 128
Query: 111 GVVDGQAMK-----FVVT-------KNEIKNVMVSW---NHTGACSGDE----------- 144
G +DGQ K F V +I W N T A +
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQRR 188
Query: 145 -CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C+ + + V++ +W ++ CDN I+ ++I + +PN DGI+ E
Sbjct: 189 FFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPE 247
Query: 204 DSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 308 GSVRKVTISN 317
>gi|404406290|ref|ZP_10997874.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 511
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 52/258 (20%)
Query: 24 GDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPR 83
GDG+ TA +Q A+D + + FP G Y T T+R+ S+ + + + A + G
Sbjct: 149 GDGLQ--TANLQRALDEASATGR--TLIFPRGVYPTGTLRIGSNTHIYLADGAIIKGSDD 204
Query: 84 IEDYPEE-----------------SSRWY----VVLAENATDVGITGGGVVDGQAMKFVV 122
EDYP + + W ++L ++A +V I G G++DG
Sbjct: 205 REDYPTDGGLPEADHIHNKEHYTDNGEWMTFSRLILVDSAENVSIRGRGIIDG------- 257
Query: 123 TKNEIKNVMVSWNHTGACSGDECRP-RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+GA + +P L+ RNV++ V LR+PA W HI D
Sbjct: 258 --------------SGAMLRAQGKPANLIRIRNSRNVSIEGVLLRDPAAWNTHIHYSDGV 303
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-----YTGPLYNLTA 236
IRD+ + D PN DG D + S N +I DD + KT L N+
Sbjct: 304 TIRDVKLINDATVPNTDGFDPDASTNVMIDHCFAYCSDDNVAIKTTNNLGLNKDLRNIVI 363
Query: 237 TDSWIRTKSSAIKLGSAS 254
T+ S++K+G+ +
Sbjct: 364 RSCVFLTRKSSLKVGTET 381
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAID--ACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ DFGA GDG +T A + AI G+ Q+ P G++LT + L SH TL+I E
Sbjct: 57 LTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHFTLHIKE 116
Query: 75 DATLLGGPRIEDYP--------EESSRWYVVLAENATDVGITG-GGVVDGQAMKFVVTKN 125
AT+L +YP ++ ++ N TDV I G G ++GQ
Sbjct: 117 GATILASQDESEYPMLQVLPSYRDTRFASLIYGSNLTDVVIAGDKGTINGQG-------- 168
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
K+ + + G S RP L+ NV + N+ L + W +H V C N I+
Sbjct: 169 --KSWWAKYRNGGFKSIQ--RPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKG 224
Query: 186 MSIYGDFNTPNNDGID 201
+ I ++ N DGI+
Sbjct: 225 VKISNPIDSANTDGIN 240
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ +FGA DG +T AIQ+AIDAC G K V P G ++T I LKS +TL + +
Sbjct: 103 ITEFGAVADGQTINTEAIQAAIDACTAGGK---VVVPKGTFVTGAIFLKSRMTLYVEQGG 159
Query: 77 TLLGGPRIEDYPEESSRW-------YVVL------AENATD-VGITGGGVVDGQAMKFVV 122
LLG +DYP RW Y L AE + + I G G +D M
Sbjct: 160 VLLGSDNPDDYPVMQYRWEGREQLCYASLINTKDPAEGRLEQIIIEGEGKIDANGMALF- 218
Query: 123 TKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
H R R V V + ++ +R+ WC+H++ C+
Sbjct: 219 -------------HKEMAEKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVS 265
Query: 183 IRDMSIYGDFNTP--------NNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ + I+ + N DG++ + +++ I I + DD I K+
Sbjct: 266 VNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKS 317
>gi|354603312|ref|ZP_09021311.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
gi|353349189|gb|EHB93455.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
Length = 252
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLL 79
FG K DG +T +IQ A+D N ++ F G YLT TI LKS+VT+ I E A L+
Sbjct: 31 FGVKSDGTTNNTRSIQKAVDFISE-NGGGELAFYVGRYLTGTIHLKSNVTIVIKEGAALM 89
Query: 80 GGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGA 139
DY + +++A+ A ++GITG G++DGQ +VT + N + + A
Sbjct: 90 ASTSPYDYDYVNGTAALIVADTAKNIGITGKGLIDGQGT--LVTGHY--NTQAAQGNLAA 145
Query: 140 CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDG 199
G P L+ GC V V + L A C + + +++ N P G
Sbjct: 146 --GKNTVPALIYMNGCTGVTVEGILLNNSAEDVAIFNNCTDVTVTGITVDSKLN-PATAG 202
Query: 200 IDIEDSNNTVITRVQIDTGDDAICPK 225
+ +E N + ID A+ K
Sbjct: 203 VVLEGCTNVKLNESFIDVPAAALQTK 228
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 48/261 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
++ ++ DFGA GDGI ++ A ++ID N +V G +LT I++KS++ L +
Sbjct: 56 YVVNISDFGAIGDGITDNSEAFAASIDDVA-ANGGGKVVVSRGIWLTGPIKMKSNINLYL 114
Query: 73 HEDATLLGGPRIEDYPE-----ESSRWYVVL----AENATDVGITGGGVVDGQA------ 117
+ A +L + YP E Y + A N ++ TG GV DG
Sbjct: 115 EDGAVVLFSSDFDKYPLIETSFEGLETYRCMSPIHAHNLENIAFTGNGVFDGSGDAWRPV 174
Query: 118 MKFVVTKNEIKNVMVS----------WNHTGACSG----------------------DEC 145
K +T ++ KN++ S W T D
Sbjct: 175 KKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEEYEKVKDFL 234
Query: 146 RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDS 205
RP +V C+ V + + W +H + +N IR+++I + + N DG+D+E
Sbjct: 235 RPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGDGLDLESC 294
Query: 206 NNTVITRVQIDTGDDAICPKT 226
N +I D GDDAIC K+
Sbjct: 295 KNVLIYNNSFDVGDDAICFKS 315
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 126/310 (40%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L +TT + V + GAK +G +T I S ID G + FP G YLT
Sbjct: 10 FLCFCATTILRAERVDMLKTGAKANGKALNTKLINSTIDRLNRGGGG-TLFFPAGTYLTG 68
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+I LKS++TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 69 SIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 128
Query: 111 GVVDGQAMK-----FVVT-------KNEIKNVMVSW---NHTGACSGDE----------- 144
G +DGQ K F V +I W N T A +
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQRR 188
Query: 145 -CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++ E
Sbjct: 189 FFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITI-DNAPSPNTDGVNPE 247
Query: 204 DSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 308 GSVRKVTISN 317
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T + Q+A+ Q+ P G +LT + L SH+TL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ A ++G + +P S ++ +N DV ITG G +DG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDG 158
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN + + RP LV F+ + + N+ W +H
Sbjct: 159 QGSTW-------------WNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHP 205
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + ++I + P N GI + +N I I DAI K+
Sbjct: 206 VYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKS 256
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 35 HSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTL 94
Query: 71 NIHEDATLLGGPRIEDYPEESSRWYVV--LAENATDVGITGG---GVVDGQAMKFVVTKN 125
+ + A L+G ++ S W VV L + + GG +++G + VV
Sbjct: 95 FLEKGAVLIG-------TQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTG 147
Query: 126 EIKNV----MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
+ MV W+ S + RP LV F+ V V N+ + +H V C +
Sbjct: 148 NNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHV 207
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
I+++SI +P GI + S+N I + G DAI K+
Sbjct: 208 HIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKS 252
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT-ATIRLKSHVTLNIHED 75
+ DFGA+ G A+ +AID C +V P G + + + LKSHV L++
Sbjct: 44 ITDFGAEAGGEADCRPAVAAAIDRCSREGG-GRVVIPAGRWFSKGPVVLKSHVNLHLEAG 102
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ-AMKFVVTK 124
A L DY P +RW ++ A AT++ +TG GV+DG+ + F K
Sbjct: 103 AVLFFSSDEADYLPAVLTRWEGTEVYNYSPLIYAWQATNIAVTGQGVIDGRGSHNFAHWK 162
Query: 125 NEIKNVMVSWNHTGA----------CSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
K + G G RP ++ + C +V + V + +W +H
Sbjct: 163 PRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFVDSPFWVIH 222
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT-------- 226
+ C+N +R +++ D NNDG D E N +I TGDD I K+
Sbjct: 223 PLACENVTVRGVTV--DSYNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSGRDNDAWR 280
Query: 227 YTGPLYNLTATDSWIRTKSSAIKLGS 252
P N+ + R+K++ + +GS
Sbjct: 281 IGRPTENVLIRNCSFRSKANGVCIGS 306
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSA---IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
SV FGA+GDG +T A A I+ + PPG +LT L SH+TL +
Sbjct: 39 SVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTGPFNLTSHMTLFL 98
Query: 73 HEDATLLGG------PRIEDYPE-------ESSRWYVVLAENA-TDVGITG-GGVVDGQA 117
A + P I+ P R+ ++ N DV ITG G +DGQ
Sbjct: 99 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVFITGENGTIDGQG 158
Query: 118 MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVR 177
+ W+ + RP L+ + +V V NV ++ +W +H V
Sbjct: 159 SLW-------------WDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVY 205
Query: 178 CDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
C N I ++++ ++PN DGID++ S+N I I GDD I K+
Sbjct: 206 CSNVVIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKS 254
>gi|408369676|ref|ZP_11167456.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
gi|407744730|gb|EKF56297.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
Length = 441
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ + D G D T A+Q+ ID V P G +LT ++ + L +
Sbjct: 53 VYKITDHGVVSDSTQVQTKALQAVIDLTASKGGGVVV-IPKGVFLTGSLFFRQSTHLYLE 111
Query: 74 EDATLLGGPRIEDYP-------EESSRWY--VVLAENATDVGITGGGVVDGQAMKFVVTK 124
+ A L G I ++P ES +++ ++ + +TG G ++G +++
Sbjct: 112 KGAVLKGSDDISNFPVVMTRIEGESVKYFPAIINVDGVDGFTLTGEGTINGNGLRYW--- 168
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+ + WN + DE RPRL+ +N+ + V L++ +W H +C+N +
Sbjct: 169 -KAFWLRRQWN-PDCTNKDEMRPRLLYVSNSKNIQISGVHLKDSPFWTTHFYKCENVKLL 226
Query: 185 DMSIYG---DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPL 231
++ I P+ D +DI+ N +I + DDA+ K GP
Sbjct: 227 NLKITSPSEPVKAPSTDAVDIDVCTNFLIKNCYMSVNDDAVALKGGKGPF 276
>gi|325103540|ref|YP_004273194.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972388|gb|ADY51372.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 508
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 51/289 (17%)
Query: 8 STTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSH 67
+T I + +G G +T IQ A+D K + F G Y T T+++ S+
Sbjct: 126 ATPKAKIIDIKSYGVDSTGNKVETKLIQRALDETARDKKI--LVFSSGIYRTGTLKISSN 183
Query: 68 VTLNIHEDATLLGGPRIEDYPEESSR-----------------WY----VVLAENATDVG 106
+ + A + G DYP + ++ W ++L A +V
Sbjct: 184 ANIYLAPGAVIKGSDDRNDYPADGNKKESDHVNDKANFTDNGEWMTFSRLILIGEAENVR 243
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRP-RLVGFLGCRNVNVWNVRL 165
I G G++DG G + +P L+ RNV + + L
Sbjct: 244 IWGSGIIDGN---------------------GRVVRAQGKPANLIRIRNSRNVTIEGIML 282
Query: 166 REPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
R+PA W HI++ +N IR++ I D N DG D + S N I GDD+I K
Sbjct: 283 RDPASWNTHILKSENITIRNVKILNDREVANTDGFDPDASQNVKIDNCFAYCGDDSIAIK 342
Query: 226 -TYTGPLY----NLTATDSWIRTKSSAIKLGSASWFD-FKALVFDNITI 268
T L N+ +S TK SA+K+G+ + + K ++F N TI
Sbjct: 343 NTNNSDLIQDCDNIVIKNSVFITKKSALKVGTETKGNTMKNILFKNNTI 391
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 45/264 (17%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+ ++D+ D ++ TAAI AI+ C V P G + T IRLKS+V L++ +
Sbjct: 50 YQMLDYYNGTDSLY--TAAINEAINTCSQQGG-GHVIIPDGTWKTGPIRLKSNVDLHLSD 106
Query: 75 DATLLGG--PRIEDYP-----EESSRWY----VVLAENATDVGITGGGVVDGQAMKFVVT 123
A LL PRI +P EE Y ++ A ++ ITG G++DGQ+ +
Sbjct: 107 KAHLLFSTDPRI--FPTVLTREEGIDCYNISPLIYAYGEKNIAITGKGIMDGQSDETNWQ 164
Query: 124 KNEIKNVM----------------------VSWNHTGACSGDECRPRLVGFLGCRNVNVW 161
K E +N+ + G RP+ V C NV +
Sbjct: 165 KKERRNIQKDSKGKIGERNLLLEYKVNRTPIEQRRFEGMMG--MRPQFVNTYKCENVLIE 222
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
+W LH + N +RD+++ D + NNDG D E N +I R + +TGDD
Sbjct: 223 GPTFNRSPFWILHPLLSKNVIVRDVNL--DSHGRNNDGCDPESCENVLIERCRFNTGDDC 280
Query: 222 ICPKT---YTGPLYNLTATDSWIR 242
I K+ G ++N+ + + IR
Sbjct: 281 IAIKSGKDEDGRVWNIPSKNIIIR 304
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H ++ +FGA GDG+ +T + Q+A+ Q+ P G +LT + L SH+TL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+ A ++G + +P S ++ +N DV ITG G +DG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDG 158
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + WN + + RP LV F+ + + N+ W +H
Sbjct: 159 QGSTW-------------WNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHP 205
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V C N + ++I + P N GI + +N I I DAI K+
Sbjct: 206 VYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKS 256
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 43/251 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++IDFGA GD +T AI +AI +C QV P G+++T I L S+V L++ E
Sbjct: 64 NIIDFGANGDNKTNNTVAINNAIKSCN-AQGGGQVIIPQGQFITGAIHLLSNVNLHLEEG 122
Query: 76 ATLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQAM------- 118
A L EDY P +RW ++ A ++ ITG G+++G A
Sbjct: 123 AILSFSTSPEDYLPAVFTRWEGLEMMGYSPLIYAFEQENIAITGKGILEGNANNTTWWPW 182
Query: 119 -----------------KFVVTKNEIKNVM------VSWNHTGACSGDECRPRLVGFLGC 155
+ + K +M + G RP + C
Sbjct: 183 KGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRPPFIQPYRC 242
Query: 156 RNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQI 215
NV + + ++ +W ++ V C++ + D++ + PN+DG D E N+ I
Sbjct: 243 NNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVHIKNCVF 300
Query: 216 DTGDDAICPKT 226
DTGDD I K+
Sbjct: 301 DTGDDCIAIKS 311
>gi|198277376|ref|ZP_03209907.1| hypothetical protein BACPLE_03588 [Bacteroides plebeius DSM 17135]
gi|198269874|gb|EDY94144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 428
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
+ + ++G + D T IQ+ ID G C P G +L+ ++ + L +
Sbjct: 36 YCITNYGVQNDSTILQTERIQAVIDKAAQDGGGVIC---IPKGTFLSGSLFFRPRTHLYL 92
Query: 73 HEDATLLGGPRIEDYPEESSRW------YVVLAENATDVG---ITGGGVVDGQAMKFVVT 123
+ ATL G I + +R Y N V ++G G ++G ++F
Sbjct: 93 EKGATLKGSDDISHFDVIDTRLEGQNLTYFAALVNVIGVDGFTLSGEGKINGNGLRF--- 149
Query: 124 KNEIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTF 182
K+ + C+ +E RPRLV RNV + VRL +W H+ RC+N
Sbjct: 150 ---WKSFWLRRQVNPQCTNLEELRPRLVYIADSRNVQLSGVRLENSPFWTTHLYRCENVK 206
Query: 183 IRDMSIYGDFN---TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
+ ++SI+ + P++D IDI+ N ++ + DDAI K GP
Sbjct: 207 LLNLSIFAPHSPVKAPSSDAIDIDVCKNVLVKGCYMSVNDDAIALKGGKGP 257
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 49/262 (18%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNI 72
H ++ +GA G+GI +TAA AID +V P G +LT + L+S++ L++
Sbjct: 53 HEVNITAYGAVGNGIEKNTAAFAKAIDEVAQAGG-GRVIVPRGIWLTGPVTLQSNINLHL 111
Query: 73 HEDATLLGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDG-------- 115
E A +L +DYP + + + A A ++ ITG GV+DG
Sbjct: 112 EEGALVLFSRDFDDYPLVKTSFEGLNTVRCTSPINAFEAENIAITGKGVIDGNGDAWRPV 171
Query: 116 --------QAMKFVVTKNEIKNVMVSWNHTG-----------------------ACSGDE 144
Q K V + + + W T A D
Sbjct: 172 KKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLISDDELASVKDF 231
Query: 145 CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
RP +V + C V + + W +H + +N IR++++ + + N DG+D+E
Sbjct: 232 LRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLES 291
Query: 205 SNNTVITRVQIDTGDDAICPKT 226
N ++ D GDDAIC K+
Sbjct: 292 CKNALVYNNTFDVGDDAICFKS 313
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 98/256 (38%), Gaps = 50/256 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA GDG T A AIDA ++ P G + T I LKS++ L++ + A +
Sbjct: 53 DFGAIGDGSSLCTTAFAKAIDALTQKGGG-KLIVPQGVWFTGPIVLKSNINLHLEKGAVI 111
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L P YP + + + + T+V ITG G +DG + K + K
Sbjct: 112 LFSPDDALYPFIETSFEGLDTRRCQSPISGHHLTNVAITGQGCIDGNGEYWRPLKKQ-KV 170
Query: 130 VMVSWNH-----------------TGACSGDEC----------------------RPRLV 150
W GA D RP ++
Sbjct: 171 TAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPASEEEWNEIKRFLRPVMI 230
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ C+NV + V + W +H + C+N I D+ + N DG+D+E N +I
Sbjct: 231 SLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQNGDGLDLESCKNALI 290
Query: 211 TRVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 291 VNSTFDVGDDGICIKS 306
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 50/257 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
DFGA DG+ +T AI +AI +V P G +LT + L S+V L ++A +
Sbjct: 63 DFGALSDGVTLNTEAINNAIKTVS-SKGGGKVIIPEGLWLTGPVVLLSNVNLYTEKNALI 121
Query: 79 LGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MKFVVT 123
+ YP + + + A NA ++ ITG GV DG K +T
Sbjct: 122 VFSSDTSLYPIIEASFEGLDTKRCQSPISAMNAENIAITGSGVFDGAGDRWRPVKKDKMT 181
Query: 124 KNEIKNVMVSWNH---------------------TGACSGDE-------------CRPRL 149
+ + KN++ S TG SG + RP +
Sbjct: 182 ERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNSGQKEITDEEWIYMKSWLRPVM 241
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + + + V + WC+H + C++ + D+ ++ + + N D +D+E N +
Sbjct: 242 LSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVL 301
Query: 210 ITRVQIDTGDDAICPKT 226
+T D GDDAIC K+
Sbjct: 302 VTNCFFDAGDDAICLKS 318
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 37/285 (12%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKS 66
+T H S+ DFGA GDG +T A Q+A+ Q+ PPG +LT + L S
Sbjct: 37 STRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTS 96
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
H+TL + A ++ ++ S W VV + GI + G+ K ++ N+
Sbjct: 97 HLTLFLENGAVIVAS-------QDPSHWEVVDPLPSYGRGID----LPGKRYKSLINGNK 145
Query: 127 IKNVMVS-------------WNHTGACSGDECRPRLVGFLGCRNVNVWNVR-LREPAYWC 172
+ +V+V+ W+ + S RP L+ FL NV V N+ L PAY
Sbjct: 146 LHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAY-S 204
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
++ + + +I + + +P GI + S+ I I+ G DAI K+
Sbjct: 205 IYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYG 264
Query: 227 --YTGPLYNLTATDSWIRTKS-SAIKLGSASWFDFKALVFDNITI 268
Y+ P N+ + ++R S S+I GS +V DN I
Sbjct: 265 IAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHI 309
>gi|218199292|gb|EEC81719.1| hypothetical protein OsI_25337 [Oryza sativa Indica Group]
Length = 429
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRL----KSHV 68
+ V GA GDG H DT A+ A +P V P G+ YLT I L KS +
Sbjct: 52 VFDVRKHGAYGDGQHDDTKALSKAWAVACSSLQPSIVLVPKGKRYLTKHITLSGPCKSSI 111
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
T I + TL+ P D+ +E+ R +++ + + GGG VDG + +N K
Sbjct: 112 TFMI--EGTLVAPPTRSDWSKETIRHWIMF-NGVIGLTVDGGGTVDGNGK--IWWQNSCK 166
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
N AC+ P + F C N+ V N++L + + C N I ++I
Sbjct: 167 T-----NAKLACTES---PTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGLTI 218
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+PN DGI I S N +T I TGDD +
Sbjct: 219 TAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCM 252
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L +TT + V + GAK +G +T I S ID G + FP G YL
Sbjct: 8 IVFLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYL 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 67 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 126
Query: 109 GGGVVDGQAMKF---------------VVTKNEIKNVMVSWNHTGACSGDE--------- 144
G G +DGQ K+ + N+ +++ + N T A +
Sbjct: 127 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVN 245
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 246 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSE 305
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 306 MSGSVRKVTISN 317
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 33/205 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQ---VRFPPGEYLTATIRLKSHVTLNI 72
SV +FGA GDG +TAA + A+ + PPG +LT + L S TL +
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 73 HEDATLLGGPRIEDYP------------EESSRWYVVL--AENATDVGITGG-GVVDGQA 117
H A +LG E++P E ++ L E DV ITG G +DGQ
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 118 -MKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
M + + +N + NHT R L+ + NV + +V L +W +H V
Sbjct: 209 HMWWELWRNR------TLNHT--------RGHLIELVNSTNVLISSVTLSNSPFWTVHPV 254
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGID 201
C N ++D++I + PN DGID
Sbjct: 255 YCSNVVMKDLTILAPLDAPNTDGID 279
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L +TT + V + GAK +G +T I S ID G + FP G YLT
Sbjct: 19 FLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYLTG 77
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+I LKS++TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 78 SIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 137
Query: 111 GVVDGQA----MKFVVTK-----------NEIKNVMVSWNHTGACSGDE----------- 144
G +DGQ M+F N+ +++ + N T A +
Sbjct: 138 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 197
Query: 145 -CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++ E
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 256
Query: 204 DSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 316
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 317 GSVRKVTISN 326
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDA 76
+ DFGA + +T AI +AID+ V P GE+LT I KS+V L++ E A
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAH-AIAGGTVVIPKGEWLTGKIHFKSNVNLHLEEGA 110
Query: 77 TLLGGPRIEDY-PEESSRWY---------VVLAENATDVGITGGGVVDGQ----AMKFVV 122
TLL +DY P S W ++ A ++ ITG G + + + F
Sbjct: 111 TLLFSEDPQDYLPAVLSTWEGMECYNYSPLIYAYECENIAITGKGKLKAKMDTWEVWFAR 170
Query: 123 TKNEIKNVMVSWNHTG----------ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWC 172
++N+ + RP+ + F +++ + + + +W
Sbjct: 171 PSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEGIAIENSPFWV 230
Query: 173 LHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT------ 226
+H + IR+++++ + NNDG+D E S N +I D GDDAI K
Sbjct: 231 IHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAVKAGRNQDA 288
Query: 227 --YTGPLYNLTATDSWIRTKSSAIKLGS 252
P+ N+ D ++ + +GS
Sbjct: 289 WRLNTPVKNIVIRDCSVKNGHQLLAIGS 316
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 46/292 (15%)
Query: 17 VIDFGAKGDGIHYDT-AAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+ DFGAK D AI AI C N V P G + T + LKS+V ++ E
Sbjct: 50 ITDFGAKPDTPDEPCHEAINQAIVTCSL-NGGGTVVVPKGTFHTGPVTLKSNVNFHVEEG 108
Query: 76 ATL-LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMK------ 119
A L + +P +RW ++ A T++ ITG G +DGQ
Sbjct: 109 AVLKFSTDQSLYFPAVITRWEGLDCYNARPLIYAYGETNIAITGKGTIDGQGSNETWWSM 168
Query: 120 -----------FVVTKNEIKNVMVSWNHTGA-------CSGDECRPRLVGFLGCRNVNVW 161
V +N + ++ + T D RP+L+ C V +
Sbjct: 169 CGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLYSCNTVLIE 228
Query: 162 NVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDA 221
+V L +W +H + C++ +R + ++ PN DG D E N +I DTGDD
Sbjct: 229 DVTLLNSPFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDC 286
Query: 222 ICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASWFDFKALVFDN 265
I K+ + P N+ +++ + +GS ++ L +N
Sbjct: 287 IAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHGGVVIGSEISGGYRNLFVEN 338
>gi|1212786|emb|CAA65072.1| polygalacturonase [Brassica napus]
gi|1403141|emb|CAA67020.1| endo-polygalacturonidase [Brassica napus]
Length = 433
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 9 TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRL--- 64
TT SV +FGAKGDG DT A + A N P G+ YL +IR
Sbjct: 63 TTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKSIRFRGP 122
Query: 65 -KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGG--GVVDGQAMKFV 121
KS + I TL + DY + + W ++ E+ ++ I GG G+VDG
Sbjct: 123 CKSLRSFQIL--GTLSASTKRSDYSNDKNHWLIL--EDVNNLSIDGGSAGIVDG------ 172
Query: 122 VTKNEIKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
N + W ++ C D+ +P + +N+NV N+R+R + I
Sbjct: 173 -------NGNIWWQNS--CKIDKSKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIE 223
Query: 177 RCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+C+N ++++ I ++PN DGI I + N I+ I TGDD I
Sbjct: 224 KCNNVGVKNVKITAPGDSPNTDGIHIVATKNIRISNSDIGTGDDCI 269
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L +TT + V + GAK +G +T I S ID G + FP G YLT
Sbjct: 19 FLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYLTG 77
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+I LKS++TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 78 SIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 137
Query: 111 GVVDGQA----MKFVVTK-----------NEIKNVMVSWNHTGACSGDE----------- 144
G +DGQ M+F N+ +++ + N T A +
Sbjct: 138 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 197
Query: 145 -CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++ E
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 256
Query: 204 DSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 316
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 317 GSVRKVTISN 326
>gi|356519948|ref|XP_003528630.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 422
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 13 HIHSVIDFGAKGDGIHYDTAA-IQSAIDACPPGNKPCQVRFPPGEYLTATIRLK---SHV 68
I +V DFGAKGDG T + +Q+ C + P ++ P G ++ +++ +
Sbjct: 51 QIVNVQDFGAKGDGKFDCTESFMQAWAKTCHQSSGPARLYVPAGRFVVSSMYFNGPCNAT 110
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
++ I T+L I +Y E+ W + +N + I GGG DGQ
Sbjct: 111 SITIQVQGTVLATTDISEY--ENGDW--LFFQNHNGLKIVGGGTFDGQGKD--------- 157
Query: 129 NVMVSWNHTGACS----GDECR-PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFI 183
SW + C G R P + F G N+ V N+R P + + + +C N +
Sbjct: 158 ----SWQYAQNCESANDGSCARNPSNLYFSGNSNLVVQNIRSVNPKGFHIFVTKCTNVRL 213
Query: 184 RDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
R + + +PN DGI + S+ +++R I TGDD +
Sbjct: 214 RKLKLVAPGTSPNTDGIHVSHSDTVIMSRNTIATGDDCV 252
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ + +FG GDG +T A +A+ A ++ P G +LTA L S +TL +
Sbjct: 10 VYDLREFGGVGDGRTLNTEAFVAAV-ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLFLA 68
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
A +LG P + P E Y ++ ++ DV ITG G ++GQ
Sbjct: 69 AGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQ 128
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ W+ + R LV + N+ + N+ LR+ +W LHI C
Sbjct: 129 SW-------------WSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDC 175
Query: 179 DNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
+ I D +I PN DGID + N VI I GDD I K+ Y
Sbjct: 176 KDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGR 235
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + IR+ SA + +GS ++ +N+ I
Sbjct: 236 PSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHI 275
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 49/310 (15%)
Query: 3 LLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTA 60
L +TT + V + GAK +G +T I S ID G + FP G YLT
Sbjct: 10 FLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYLTG 68
Query: 61 TIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGITGG 110
+I LKS++TL + ATLL +DY P R V+ A +A ++ I G
Sbjct: 69 SIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIKGE 128
Query: 111 GVVDGQAMKF---------------VVTKNEIKNVMVSWNHTGACSGDE----------- 144
G +DGQ K+ + N+ +++ + N T A +
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 145 -CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIE 203
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++ E
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 204 DSNNTVITRVQIDTGDDAICPKTYTG--------PLYNLTATDSWIRTKSSAIKLGSASW 255
N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 256 FDFKALVFDN 265
+ + N
Sbjct: 308 GSVRKVTISN 317
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA DG+ +T AI +AI A +V P G +LT + L S+V L ++
Sbjct: 60 NIRDFGALSDGVTLNTEAINNAIKAVS-SKGGGKVIIPEGLWLTGPVVLLSNVNLYAEKN 118
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MKF 120
A ++ YP + + + A NA ++ ITG GV DG K
Sbjct: 119 ALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWRPVKKD 178
Query: 121 VVTKNEIKNVMVSWNH---------------------TGACSGDE-------------CR 146
+T+ + KN++ S TG +G + R
Sbjct: 179 KMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTYMKSWLR 238
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P ++ + + + + V + WC+H + C++ + D+ ++ + + N D +D+E
Sbjct: 239 PVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCK 298
Query: 207 NTVITRVQIDTGDDAICPKT 226
N ++T D GDDAIC K+
Sbjct: 299 NVLVTNCFFDAGDDAICLKS 318
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 50/260 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ DFGA DG+ +T AI +AI A +V P G +LT + L S+V L ++
Sbjct: 60 NIRDFGALSDGVTLNTEAINNAIKAVS-SKGGGKVIIPEGLWLTGPVVLLSNVNLYAEKN 118
Query: 76 ATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MKF 120
A ++ YP + + + A NA ++ ITG GV DG K
Sbjct: 119 ALIVFSSDTSLYPIIDTSFEGLDTKRCQSPISAMNAENIAITGNGVFDGAGDRWRPVKKD 178
Query: 121 VVTKNEIKNVMVSWNH---------------------TGACSGDE-------------CR 146
+T+ + KN++ S TG +G + R
Sbjct: 179 KMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTYMKSWLR 238
Query: 147 PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSN 206
P ++ + + + + V + WC+H + C++ + D+ ++ + + N D +D+E
Sbjct: 239 PVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCK 298
Query: 207 NTVITRVQIDTGDDAICPKT 226
N ++T D GDDAIC K+
Sbjct: 299 NVLVTNCFFDAGDDAICLKS 318
>gi|380693880|ref|ZP_09858739.1| exopolygalacturonase [Bacteroides faecis MAJ27]
Length = 432
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
+S+ +G D T IQ ID N + P G +L+ ++ K++ L + E
Sbjct: 47 YSITSYGVVNDSTVVQTKKIQEVIDLAAQ-NGGGVIVVPQGTFLSGSLFFKNNTHLYLEE 105
Query: 75 DATLLGGPRIEDYPEESSR-------WYVVL--AENATDVGITGGGVVDGQAMKFVVTKN 125
+A L G I +P + +R +++ L A+ I+G G ++G +++
Sbjct: 106 NAVLKGSDDISHFPVKMTRMEGQTLNYFMALVNADGLDGFTISGKGTLNGNGLRY----- 160
Query: 126 EIKNVMVSWNHTGACSG-DECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
K+ + + C+ +E RPR++ C+NV + +R+ + +W H +C +
Sbjct: 161 -WKSFWLRRSINPDCTNMEEMRPRIIYMSNCKNVQIEGIRIMDSPFWSTHFYKCSFLKLL 219
Query: 185 DMSI---YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGP 230
++ I P+ D +D++ NN +I + DDA+ K GP
Sbjct: 220 NLRITSPASPVKAPSTDAVDLDVCNNVLIKNCYMSVNDDAVALKGGKGP 268
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 102/259 (39%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV D+GA GDG+ +T A AI AC +V P G +LT + L S + L+
Sbjct: 29 SVTDYGAVGDGVTDNTEAFHKAIAACSQAGG-GRVVIPAGVWLTGPLSLASRLDLHAQAG 87
Query: 76 ATLLGGPRIEDYP--------EESSRWYVVL-AENATDVGITGGGVVDGQA------MKF 120
A +L R EDYP + S R L E V ITG GV DG +
Sbjct: 88 ALVLFSRRFEDYPMIFSQYEGQPSIRCQSPLDGEGLEHVAITGAGVFDGGGDAWRPVKDW 147
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG----------------------DECRP 147
+T+ ++ S W A +G D RP
Sbjct: 148 KMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEAARDYLRP 207
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ C+ V + + W LH C++ +R +++ + N DG+D++
Sbjct: 208 NLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLDSCRY 267
Query: 208 TVITRVQIDTGDDAICPKT 226
++ D GDDAIC K+
Sbjct: 268 GLVEDCSFDVGDDAICIKS 286
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 120/280 (42%), Gaps = 39/280 (13%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
++ + +FG GDG +T A +A+ A ++ P G +LTA L S +TL +
Sbjct: 110 VYDLREFGGVGDGRTLNTEAFVAAV-ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLFLA 168
Query: 74 EDATLLG------GPRIEDYP------EESSRWY--VVLAENATDVGITG-GGVVDGQAM 118
A +LG P + P E Y ++ ++ DV ITG G ++GQ
Sbjct: 169 AGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQ 228
Query: 119 KFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRC 178
+ K V+ NHT R LV + N+ + N+ LR+ +W LHI C
Sbjct: 229 SW--WSKFRKKVL---NHT--------RGPLVQLMRSSNITISNITLRDSPFWTLHIYDC 275
Query: 179 DNTFIRDMSIYGDF-NTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT--------YTG 229
+ I D +I PN DGID + N VI I GDD I K+ Y
Sbjct: 276 KDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGR 335
Query: 230 PLYNLTATDSWIRTKSSA-IKLGSASWFDFKALVFDNITI 268
P N+ + IR+ SA + +GS ++ +N+ I
Sbjct: 336 PSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHI 375
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 28/240 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE 74
S+ ++G G+G+ +T A +AI D G + P G +LT I LKS++ L++ +
Sbjct: 51 SLAEYGGIGNGMTLNTQAFAAAIADLSERGGG--HLIVPEGIWLTGPIVLKSNIDLHVLK 108
Query: 75 DATLLGGPRIEDYPEES-------SRWYV-VLAENATDVGITGGGVVDGQAM-------- 118
+A +L P YP S SR + A + ++ ITG GV DG
Sbjct: 109 NAIVLFTPDKTQYPLLSPDEGTSGSRCQSPISAYHESNFSITGEGVFDGNGELWRPVKRF 168
Query: 119 --------KFVVTKNEIKNVMVSW-NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPA 169
F+ T +K W T + + RPR+V F+ C V + V +
Sbjct: 169 KVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQGVVFQNSP 228
Query: 170 YWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+ ++ + DN + + + +N N DGID+ N +I +D GDDAIC K+ G
Sbjct: 229 SFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDAICLKSGIG 288
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 101/256 (39%), Gaps = 50/256 (19%)
Query: 19 DFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
+F A G+G T+A AI+A + P G +LT I LKS++ L++ + A +
Sbjct: 64 EFNAVGNGETLCTSAFADAINALSEQGG-GHLVVPAGVWLTGPIVLKSNIDLHLEKGAVI 122
Query: 79 LGGPRIEDYPEESSRWY---------VVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L P ++ YP + + + N +V ITG G +DG + K E K
Sbjct: 123 LFSPDVDLYPLVETVFEGLDTRRCQSPISGRNLENVAITGEGAIDGNGHYWRPLKRE-KV 181
Query: 130 VMVSWNHTGACSG--------------------------------DE-------CRPRLV 150
W T A G +E RP +V
Sbjct: 182 TESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMV 241
Query: 151 GFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVI 210
+ C+NV + V + W LH + C+N + D+ + N DG+D+E N +I
Sbjct: 242 SLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLDLESCKNALI 301
Query: 211 TRVQIDTGDDAICPKT 226
D GDD IC K+
Sbjct: 302 VNSTFDVGDDGICLKS 317
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 56/282 (19%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPC--QVRFPPGEYLTATIRLKSHVTLN 71
++++ DFG GD + +T A + AI A K Q+ P G +LTA L SH+TL
Sbjct: 74 VYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLF 133
Query: 72 IHEDATLLG---------GPRIEDY----PEESSRW-YVVLAENATDVGITG-GGVVDGQ 116
+ +DA +LG P + Y +R+ ++ +N DV +TG G ++GQ
Sbjct: 134 LDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNGTINGQ 193
Query: 117 AMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIV 176
+ W + R LV + ++ + N+ LR+ +W LH
Sbjct: 194 GQTW-------------WKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
Query: 177 RCDNTFIRDMSIYGD-FNTPNNDGID----------------IEDSNNTVITRVQIDTGD 219
C N I++++I F PN DGID + VI I GD
Sbjct: 241 DCKNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGD 300
Query: 220 DAICPKT--------YTGPLYNLTATDSWIRTKSSA-IKLGS 252
D I K+ Y P N+ + IR+ SA + +GS
Sbjct: 301 DGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGS 342
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 48/269 (17%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
+V +FGA GDG H DT AIQ AI A P K +V P G Y ++I LK ++ L + +
Sbjct: 83 NVREFGAYGDGEHDDTNAIQCAIMAAP---KDSRVLVPEGVYKISSIFLKDNLNLELAKG 139
Query: 76 ATLLGGPRIEDYP--------EESSRWY---------------VVLAENATDVGITGGGV 112
A L E +P + +Y +V N ++V ITG G
Sbjct: 140 AVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIVCGINCSNVTITGEGT 199
Query: 113 VDGQAMKFVVTKN-EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYW 171
+DG KN +I+N +W RPRL C NV + + ++ W
Sbjct: 200 IDGCTTHDNWWKNCKIRNT--AW-----------RPRLFFINNCSNVTMHGITVQNSPSW 246
Query: 172 CLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT----- 226
+H + D+ I N+ N DG+D E + ++ I GDD I K+
Sbjct: 247 TIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYM 306
Query: 227 ---YTGPLYNLTATDSWIRTKSSAIKLGS 252
P ++T +R A+ +GS
Sbjct: 307 AQKEKTPTEDMTVRQCCMRDGHGAVTVGS 335
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 50/259 (19%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRF-PPGEYLTATIRLKSHVTLNIHE 74
S+ DFG DGI +T A A+DA NK F P G + T I KS++ L++ +
Sbjct: 52 SITDFGGIPDGITLNTDAFAKAMDAL--SNKGGGTLFVPSGVWYTGPIVFKSNINLHLEK 109
Query: 75 DATLLGGPRIEDYPEESSRW---------YVVLAENATDVGITGGGVVDGQA------MK 119
A +L YP ++ + + N ++ ITG G ++G K
Sbjct: 110 GALILFSADFNLYPLVNTVFEGLDTRRCQSPISGRNLENIAITGEGSINGSGEAWRPLKK 169
Query: 120 FVVTKNEIKNVMVS----------WNHTGACSG----------------------DECRP 147
VT+ K V+ S + G+ G D RP
Sbjct: 170 SKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAEWMEIKDFLRP 229
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
+V F+ C+NV + V W +H + C+N + ++ + N DG+D+E N
Sbjct: 230 VMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLESCKN 289
Query: 208 TVITRVQIDTGDDAICPKT 226
++I D GDDAIC K+
Sbjct: 290 SIIVNSIFDVGDDAICIKS 308
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 102/259 (39%), Gaps = 49/259 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
SV D+GA GDG+ +T A AI AC +V P G +LT + L S + L+
Sbjct: 29 SVTDYGAVGDGVTDNTEAFHKAIAACSQAGG-GRVVIPAGVWLTGPLSLASRLDLHAQAG 87
Query: 76 ATLLGGPRIEDYP--------EESSRWYVVL-AENATDVGITGGGVVDGQA------MKF 120
A +L R EDYP + S R L E V ITG GV DG +
Sbjct: 88 ALVLFSRRFEDYPMIFSQYEGQPSIRCQSPLDGEGLEHVAITGAGVFDGGGDAWRPVKDW 147
Query: 121 VVTKNEIKNVMVS-----------WNHTGACSG----------------------DECRP 147
+T+ ++ S W A +G D RP
Sbjct: 148 KMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEAARDYLRP 207
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
L+ C+ V + + W LH C++ +R +++ + N DG+D++
Sbjct: 208 NLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLDSCRY 267
Query: 208 TVITRVQIDTGDDAICPKT 226
++ D GDDAIC K+
Sbjct: 268 GLVEDCSFDVGDDAICIKS 286
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L +TT + V + GAK +G +T I S ID G + FP G YL
Sbjct: 8 IVFLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYL 66
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 67 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 126
Query: 109 GGGVVDGQA----MKFVVTKNEIKNVMV-----------SWNHTGACSGDE--------- 144
G G +DGQ M+F ++K+ + + N T A +
Sbjct: 127 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQ 186
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVN 245
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 246 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSE 305
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 306 MSGSVRKVTISN 317
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 35/263 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H + DFG GDG +T A Q+AI + ++ P G++LT + L SH TL
Sbjct: 56 HTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHFTL 115
Query: 71 NIHEDATLLGGPRIEDYP--------------EESSRWYVVLAENATDVGITGG-GVVDG 115
+H AT+L D+P + ++ N TDV ITG G +DG
Sbjct: 116 FLHRGATILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDG 175
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W+ RP L+ + + + N+ L W +H
Sbjct: 176 QGAPW-------------WDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHP 222
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGID----IEDSNNTVITRVQIDTGDDAICPKT-YTGP 230
V C N ++ ++I PN DGI+ + S + + I T D I + +G
Sbjct: 223 VYCSNVLVQGVTIIAPVEVPNTDGINPSRFLASSFHQYLNFPLISTSDAGIALGSEMSGG 282
Query: 231 LYNLTATDSWIRTKSSAIKLGSA 253
+ N+ D T SA+++ +A
Sbjct: 283 IENVRVEDITAFTSQSAVRIKTA 305
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 52/257 (20%)
Query: 20 FGAKGDGIHYDTAAIQSAI-DACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATL 78
FGAKGDG+ +T AI AI D G +V P G +LT I L S+V L +A +
Sbjct: 64 FGAKGDGLFLNTKAINDAIKDVNQHGGG--KVIIPEGIWLTGPIELLSNVNLYTERNALV 121
Query: 79 LGGPRIEDYP---------EESSRWYVVLAENATDVGITG-------------------- 109
L E YP E + A NA ++ ITG
Sbjct: 122 LFTGDFEAYPIIATSFEGLETRRCQSPISARNAENIAITGYGTFDGNGDCWRPVKKGKLT 181
Query: 110 ----------GGVVDGQAMKFVVTKNEIKNVMV--SWNHTGACSGDE--------CRPRL 149
GGV+D + + T +K M +N + DE RP L
Sbjct: 182 ASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTDEEWNEIRPWLRPVL 241
Query: 150 VGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTV 209
+ + + + + V + WCLH + C++ + ++ + + + N D ID+E N +
Sbjct: 242 LSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNAL 301
Query: 210 ITRVQIDTGDDAICPKT 226
I D GDDAIC K+
Sbjct: 302 IINSVFDAGDDAICIKS 318
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 1 VQLLLLLSTTHIHIHSV--IDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL 58
+ L +TT + V + GAK +G +T I S ID G + FP G YL
Sbjct: 18 IVFLCFCATTVLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNRGGGG-TLFFPAGTYL 76
Query: 59 TATIRLKSHVTLNIHEDATLLGGPRIEDY-PEESSRWYVVL---------AENATDVGIT 108
T +I LKS++TL + ATLL +DY P R V+ A +A ++ I
Sbjct: 77 TGSIHLKSNITLELEAGATLLFSDNFDDYLPFVEVRHEGVMMKSFQPLIYAVDAENITIK 136
Query: 109 GGGVVDGQA----MKFVVTKNEIKNVMV-----------SWNHTGACSGDE--------- 144
G G +DGQ M+F ++K+ + + N T A +
Sbjct: 137 GEGTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQ 196
Query: 145 ---CRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGID 201
RP + + C+ V + V++ +W ++ CDN I+ ++I + +PN DG++
Sbjct: 197 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVN 255
Query: 202 IEDSNNTVITRVQIDTGDDAICPKT--------YTGPLYNLTATDSWIRTKSSAIKLGSA 253
E N I+ I GDD I K+ P N+T T+ + + + +GS
Sbjct: 256 PESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSE 315
Query: 254 SWFDFKALVFDN 265
+ + N
Sbjct: 316 MSGSVRKVTISN 327
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACP--PGNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S+++FGA GDG +T A Q+AI Q+ PPG++LT + L SH+TL
Sbjct: 36 HSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTL 95
Query: 71 NIHEDATLLGGP---------------RIEDYPEESSRWYVVLAENATDVGITG-GGVVD 114
+ + AT+L P R + P + R ++ +N DV ITG G D
Sbjct: 96 FLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYR-SLINGDNLIDVVITGENGTFD 154
Query: 115 GQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLH 174
GQ + W TG+ + RP ++ F+ +++ + N+ +H
Sbjct: 155 GQGAAW-----------WEWLETGSL--NYSRPHIIEFVSSKHILISNLTFLNAPSINIH 201
Query: 175 IVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT---YTGPL 231
V C IR + I ++P G+ + S+N I I+ G DA+ K+ G
Sbjct: 202 PVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIH 261
Query: 232 YNLTATDSWIRTKS 245
Y T +IR S
Sbjct: 262 YGRPTTAVYIRNLS 275
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,617,826,463
Number of Sequences: 23463169
Number of extensions: 201679124
Number of successful extensions: 381863
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 1444
Number of HSP's that attempted gapping in prelim test: 374390
Number of HSP's gapped (non-prelim): 4244
length of query: 268
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 128
effective length of database: 9,074,351,707
effective search space: 1161517018496
effective search space used: 1161517018496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)