BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038762
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15922|PEHX_ERWCH Exo-poly-alpha-D-galacturonosidase OS=Erwinia chrysanthemi GN=pehX
PE=1 SV=1
Length = 602
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHED 75
++ +GAKGDG +T+AIQ AIDACP G C++ P G + T + LKS +TLN+ +
Sbjct: 153 NITQYGAKGDGTTLNTSAIQKAIDACPTG---CRIDVPAGVFKTGALWLKSDMTLNLLQG 209
Query: 76 ATLLGGPRIEDYPEESSRWYVV-----------LAENATDVG------ITGGGVVDGQAM 118
ATLLG DYP+ + V + +N++ VG I G G++DG
Sbjct: 210 ATLLGSDNAADYPDAYKIYSYVSQVRPASLLNAIDKNSSAVGTFKNIRIVGKGIIDGNGW 269
Query: 119 KFVV-TKNEIKNVMVSW----------------NHTGACSG---------DECRPRLVGF 152
K K+E+ N + + N A + R LV
Sbjct: 270 KRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRRSSLVTL 329
Query: 153 LGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITR 212
G +N + +V +R PA + + +N + + I+ FN N DG++ +S N ++
Sbjct: 330 RGVQNAYIADVTIRNPANHGIMFLESENV-VENSVIHQTFNANNGDGVEFGNSQNIMVFN 388
Query: 213 VQIDTGDDAICPKTYTG-------PLYNLTATDSWIRTKSSAIKLGS 252
DTGDD+I G P N +++ R A+ LGS
Sbjct: 389 SVFDTGDDSINFAAGMGQDAQKQEPSQNAWLFNNFFRHGHGAVVLGS 435
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 30/231 (12%)
Query: 13 HIHSVIDFGAKGDGIHYDTAAIQSAIDACPP--GNKPCQVRFPPGEYLTATIRLKSHVTL 70
H S++DFG GDG +T A Q A+ Q+ P G++LT + L SH TL
Sbjct: 61 HSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTL 120
Query: 71 NIHEDATLLGGPRIEDYP-------------EESSRW-YVVLAENATDVGITG-GGVVDG 115
+H DA LL I +P + R+ ++ N TDV ITG G +DG
Sbjct: 121 FLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDG 180
Query: 116 QAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI 175
Q + W RP L+ + ++ + N+ L W +H
Sbjct: 181 QGGLW-------------WQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP 227
Query: 176 VRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
V N I+ ++I +PN DGI+ + NT I I +GDD + K+
Sbjct: 228 VYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 278
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 46/250 (18%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
D + IQSAID CP G V+ GE +L+ +++LKS VTL I TL DY
Sbjct: 72 DASRIQSAIDNCPAGQAVKLVKGSAGESGFLSGSLKLKSGVTLWIDTGVTLFASRNPADY 131
Query: 88 ------------PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
+ S +++A + GI G G +DG+ +VT N + W+
Sbjct: 132 DNGLGTCGTATTSNDKSCNALIVARDTAGSGIVGAGAIDGRGGS-LVTSGPNANRLTWWD 190
Query: 136 --HTGACSG-DECRPRLVGFL-----------------------GCRNVNVWNVRLREPA 169
+ G ++ PRL+ G V W +++ P+
Sbjct: 191 IAYLNKTKGLNQQNPRLIQTYNGSAFTLYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPS 250
Query: 170 Y-WCLHIVRCDNTFIRDMSIYGDFNTP----NNDGIDIEDSNNTVITRVQIDTGDDAICP 224
+ + +C + D TP N DG D S N V+ I+TGDD +
Sbjct: 251 LAYAVAGYKCPSGSTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAV 310
Query: 225 KTYTGPLYNL 234
K +GP NL
Sbjct: 311 KASSGPTRNL 320
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 3 LLLLLSTTHIHIH----SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-Y 57
+L L+S+ + SV +FGAKGDG DT A + A N P G+ Y
Sbjct: 52 VLSLISSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTY 111
Query: 58 LTATIRLKS--HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGG--GVV 113
L + R + N TL + DY +++ W ++ E+ ++ I GG G++
Sbjct: 112 LLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKN-HWLIL--EDVNNLSIDGGSTGII 168
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRP-----RLVGFLGCRNVNVWNVRLREP 168
+G + W + +C D+ +P + +N+NV N+R++
Sbjct: 169 NGNGKTW-------------WQN--SCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNA 213
Query: 169 AYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ I +C+ + ++ I ++PN DGI I ++ N ++ I TGDD I
Sbjct: 214 QQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCI 267
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLNI 72
+ GA G+G T A+Q A + G + P G++L + K VT+ +
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQV 102
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
D LL + Y E + ++ +N ITG G +DGQ
Sbjct: 103 --DGNLLATTDLSQYKEHGNWIEILRVDNLV---ITGKGNLDGQGPAV------------ 145
Query: 133 SWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
W+ +C+ P + N V V L ++ +++ +C N I+D+++
Sbjct: 146 -WSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTA 204
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI + DS+ IT I GDD I
Sbjct: 205 PGDSPNTDGIHMGDSSGITITNTVIGVGDDCI 236
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 24/233 (10%)
Query: 3 LLLLLSTTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPG-EYLTAT 61
L L T + V FGA GDG+ D+ A A +A G Q P G ++
Sbjct: 12 LFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQP 71
Query: 62 IRLKSHV--TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMK 119
++ + T + L P ++ + +W +L + + I G G ++GQ
Sbjct: 72 LKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQW--ILFTDIEGLVIEGDGEINGQGSS 129
Query: 120 FVVTKNEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCD 179
+ W H G+ RP + F C N+ + + + +HI C+
Sbjct: 130 W-------------WEHKGS------RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECN 170
Query: 180 NTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLY 232
I + I ++PN DGID+ S+N VI I TGDD I + T ++
Sbjct: 171 YVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIH 223
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLNI 72
+ GA G+G T A+Q A + G + P G++L + K VT+ +
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQV 102
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
D LL + Y + + ++ +N ITG G +DGQ
Sbjct: 103 --DGNLLATTDLSQYKDHGNWIEILRVDNLV---ITGKGNLDGQGPAV------------ 145
Query: 133 SWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
W+ +C+ P + N V V L ++ +++ RC + I+D+++
Sbjct: 146 -WSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTA 204
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI + DS+ IT I GDD I
Sbjct: 205 PGDSPNTDGIHMGDSSGITITNTVIGVGDDCI 236
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRLKS--HVTLNI 72
SV DFGAKGDG DT A +A N + P G YL +I+L + L +
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILTV 128
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGG--GVVDGQAMKFVVTKNEIKNV 130
TL + DY ++ S+W ++ + ++ + GG GVVDG + +N K
Sbjct: 129 QIFGTLSASQKRSDY-KDISKW--IMFDGVNNLSVDGGDTGVVDGNGETWW--QNSCKR- 182
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
N C+ P + F +++ V N+++R + I +C N + ++ +
Sbjct: 183 ----NKAKPCTK---APTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTA 235
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI I ++ N ++ I TGDD I
Sbjct: 236 PADSPNTDGIHITNTQNIRVSESIIGTGDDCI 267
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLNI 72
+ GA G+G T A+Q A + G + P G++L + K VT+ +
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQV 102
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
+ LL + Y + + ++ +N ITG G +DGQ
Sbjct: 103 N--GNLLATTDLSQYKDHGNWIEILRVDNLV---ITGKGKLDGQGPAV------------ 145
Query: 133 SWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
W+ +C+ P + N V + L ++ +++ +C + I+D+++
Sbjct: 146 -WSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTA 204
Query: 191 DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI + DS+ IT I GDD I
Sbjct: 205 PGDSPNTDGIHMGDSSGVTITNTVIGVGDDCI 236
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLN 71
+V DFGAKGDG DT A + A A + P YL I KS +T+
Sbjct: 91 NVDDFGAKGDG-RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSGLTMQ 149
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
I+ T+ DY ++ W V ++ ++ + GGG ++G N
Sbjct: 150 IY--GTIEASDDRSDYRKDGRHWLVF--DSVQNLRVEGGGTING-------------NGK 192
Query: 132 VSWNHTGACSGDE---CR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
+ W ++ C ++ C+ P + F ++V V N+++ + C N ++
Sbjct: 193 IWWQNS--CKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNL 250
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ N+PN DGI + + N I+ I TGDD I
Sbjct: 251 MVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCI 286
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR-------LKSHVT 69
V +FGAKG+G+ DT A A ++ P E T +R K+ +T
Sbjct: 55 VGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVP--ENYTCLLRPIDLSGPCKARLT 112
Query: 70 LNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L I T++ P D E +R + + + + GGG V+G ++ + K+
Sbjct: 113 LQI--SGTIIA-PNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWW--ERSCKH 167
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
NH+ C G P + F C+N+ V N+ + + + + C I + +
Sbjct: 168 -----NHSNPCRG---APTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVI 219
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+PN DGI I S VI + TGDD I
Sbjct: 220 APATSPNTDGIHISVSRGIVIDNTTVSTGDDCI 252
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 24/213 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLK----SHVTLN 71
+V+ +GAK DG T A +A D P + P G +L + ++
Sbjct: 34 NVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPIS 93
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
I +++ ED+ +S + + E+ TDV I GG ++D Q KN
Sbjct: 94 IRIAGSIVAP---EDFRIIASSKHWIWFEDVTDVSIYGG-ILDAQGTSLWKCKNN----- 144
Query: 132 VSWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
G C + + F G N+ + + + + I +N I + +
Sbjct: 145 ---------GGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVS 195
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
D N+PN DGI +E S++ IT +I TGDD I
Sbjct: 196 ADENSPNTDGIHVESSHSVHITNSRIGTGDDCI 228
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYL----TATIRLKSHVT 69
+ +V +GA GDG H T A + +A K V P R
Sbjct: 58 VFNVEQYGAVGDGKHDSTEAFATTWNA--ACKKASAVLLVPANKKFFVNNLVFRGPCQPH 115
Query: 70 LNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
L+ D T++ P + ++S+ ++ A+ TD + G GV+DGQ ++ + ++ N
Sbjct: 116 LSFKVDGTIVAQPDPARW--KNSKIWLQFAQ-LTDFNLMGTGVIDGQGQQWWAGQCKVVN 172
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
N D RP + ++V V + L + L C+ I+ + I
Sbjct: 173 GRTVCN-------DRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIK 225
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGIDI S I + I TGDD I
Sbjct: 226 APRDSPNTDGIDIFASKRFHIEKCVIGTGDDCI 258
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 30/221 (13%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE-YLTATIRL----KS 66
I + +V+ FGAKGDG YD A + A + P Q P + YL I +S
Sbjct: 73 IKVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQITFSGPCRS 132
Query: 67 HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNE 126
+++ I +L +I DY + R ++ Q +
Sbjct: 133 SISVKIF--GSLEASSKISDYKDR--RLWIAFDS--------------VQNLVVGGGGTI 174
Query: 127 IKNVMVSWNHTGACSGDE---CR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNT 181
N V W +C ++ CR P + F C+N+ V N++ + + C N
Sbjct: 175 NGNGQVWW--PSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNV 232
Query: 182 FIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++ I +PN DG+ + ++ I+ I TGDD I
Sbjct: 233 VASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCI 273
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 88/220 (40%), Gaps = 33/220 (15%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGE---YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
T+ IQ A++ C G V+ G +L+ + L S V+L I + TL + +
Sbjct: 52 TSTIQKALNNCGQGK---AVKLSAGSSSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF 108
Query: 88 PEESSRWYVV-----------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
S VV A + T+ GI G G +DGQ ++++ VSW
Sbjct: 109 ENAPSSCGVVDTNGKGCDAFITATSTTNSGIYGPGTIDGQGGV------KLQDKKVSWWD 162
Query: 137 TGACSG----DECRPRLVGFLGCRNVNVWNVRL-REPAYWCLHIVRCDNTFIR--DMSIY 189
A + + PRL+ +N ++NV L P + H+V D +I
Sbjct: 163 LAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF---HVVFSDGDGFTAWKTTIK 219
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
N DGID S N I I TGDD + K Y G
Sbjct: 220 TPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKG 259
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 88/220 (40%), Gaps = 33/220 (15%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGE---YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
T+ IQ A++ C G VR G +L+ + L S V+L I + TL + +
Sbjct: 52 TSTIQKALNNCDQGK---AVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF 108
Query: 88 PEESSRWYVV-----------LAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNH 136
S VV A + T+ GI G G +DGQ ++++ VSW
Sbjct: 109 ENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGV------KLQDKKVSWWE 162
Query: 137 TGACSG----DECRPRLVGFLGCRNVNVWNVRL-REPAYWCLHIVRCDNTFIR--DMSIY 189
A + + PRL+ +N ++NV L P + H+V D +I
Sbjct: 163 LAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF---HVVFSDGDGFTAWKTTIK 219
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
N DGID S N I I TGDD + K Y G
Sbjct: 220 TPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKG 259
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIH 73
+ +V +GA GDG H T A + +A NK V P L + H
Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAA--CNKLSAVFLVPANKKFVVNNLVFYGPCQPH 116
Query: 74 EDATLLGGPRIEDYPE----ESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
+ G I YP+ ++S+ ++ A TD + G GV+DGQ ++ + + N
Sbjct: 117 FSFKVDG--TIAAYPDPAKWKNSKIWMHFAR-LTDFNLMGTGVIDGQGNRWWSDQCKTIN 173
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
N D+ RP + ++V V + L + L CD I+ + I
Sbjct: 174 GRTVCN-------DKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIK 226
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGIDI S I + I TGDD +
Sbjct: 227 APRDSPNTDGIDIFASKRFEIEKCTIGTGDDCV 259
>sp|Q8CYC9|PFBA_STRR6 Plasmin and fibronectin-binding protein A OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=pfbA PE=1 SV=1
Length = 719
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIR-LKSHVTLNIHE 74
SV D+GA GDGIH D AIQ AIDA G V FP G YL I LKSH L ++E
Sbjct: 153 SVKDYGAVGDGIHDDRQAIQDAIDAAAQGLGGGNVYFPEGTYLVKEIVFLKSHTHLELNE 212
Query: 75 DATLLGGPRIEDYP 88
AT+L G I+++P
Sbjct: 213 KATILNGINIKNHP 226
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 87/232 (37%), Gaps = 30/232 (12%)
Query: 1 VQLLLLLSTTHIHIHS---VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
V LLL +S + + + V FGAK DG + A P V P G Y
Sbjct: 13 VLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTY 72
Query: 58 LTATIRL----KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVV 113
L + + L K+ + +N+ P P R+Y V + + GGG+
Sbjct: 73 LLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV-RFYSV-----ENFKMFGGGIF 126
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRL---VGFLGCRNVNVWNVRLREPAY 170
DGQ KN C E R +L + F N + ++ ++
Sbjct: 127 DGQG-SIAYEKN-------------TCENREFRSKLPVNIRFDFLTNALIQDITSKDSKL 172
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ +++ C N + + I +PN DGI + S I I TGDD I
Sbjct: 173 FHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCI 224
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 87/232 (37%), Gaps = 30/232 (12%)
Query: 1 VQLLLLLSTTHIHIHS---VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY 57
V LLL +S + + + V FGAK DG + A P V P G Y
Sbjct: 13 VLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTY 72
Query: 58 LTATIRL----KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVV 113
L + + L K+ + +N+ P P R+Y V + + GGG+
Sbjct: 73 LLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV-RFYSV-----ENFKMFGGGIF 126
Query: 114 DGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRL---VGFLGCRNVNVWNVRLREPAY 170
DGQ KN C E R +L + F N + ++ ++
Sbjct: 127 DGQG-SIAYEKN-------------TCENREFRSKLPVNIRFDFVTNALIQDITSKDSKL 172
Query: 171 WCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ +++ C N + + I +PN DGI + S I I TGDD I
Sbjct: 173 FHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCI 224
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 20 FGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPG-EYLTATIRLK-----SHVTLNIH 73
FGAK +G + D+ A A +A + P +Y+ + S + I+
Sbjct: 76 FGAKANG-NDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLIIFKIY 134
Query: 74 EDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVS 133
P DY E R + ++ EN ++ + GGG +DG + +I
Sbjct: 135 GRIEAWENP--SDYKE---RRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKI------ 183
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
N C G P V F+ C N+ V N+RL L C N ++ + +
Sbjct: 184 -NPQLPCLG---APTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPAD 239
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+PN DGI + + N +I + TGDD I
Sbjct: 240 SPNTDGIHVSGTQNILIQDSIVRTGDDCI 268
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 12 IHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL------K 65
I+I +V +GA GDG H T A +A A KP + PG L +
Sbjct: 56 INIFNVEKYGAVGDGKHDCTEAFSTAWQA--ACKKPSAMLLVPGNKKFVVNNLFFNGPCQ 113
Query: 66 SHVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
H T + P +++R ++ A+ T + G GV+DGQ ++ +
Sbjct: 114 PHFTFKVDGIIAAYQNPA----SWKNNRIWLQFAK-LTGFTLMGKGVIDGQGKQWWAGQ- 167
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
W + D RP + F + + ++L + L C+ I
Sbjct: 168 ------CKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIG 221
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+SI ++PN DGIDI S N + + I TGDD +
Sbjct: 222 ISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCV 258
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 18/217 (8%)
Query: 14 IHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVR-----FPPGEYLTATIRLKS-- 66
+ V FGA GDG DTAA Q A A C V P G T + S
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAA------CAVESGVVLAPEGGVFKITSTIFSGP 132
Query: 67 -HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
L D L+ E++PE+ ++ ++ +G G V+G K+
Sbjct: 133 CKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPC 192
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRD 185
+ + +G C+ P ++ F N+ V +R++ + + C I +
Sbjct: 193 KPHRGPDGSSSSGPCA----SPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINE 248
Query: 186 MSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ I +PN DGI + ++ + I + GDD I
Sbjct: 249 IQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCI 285
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 19/211 (9%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHVTLN 71
SV DFGAKG+G DT A A A + + P YL I KS +TL
Sbjct: 100 SVDDFGAKGNGAD-DTQAFVKAWKAACSSSGAMVLVVPQKNYLVRPIEFSGPCKSQLTLQ 158
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
I+ T+ Y ++ W + +N ++ + G G ++G + +IK
Sbjct: 159 IY--GTIEASEDRSIY-KDIDHWLIF--DNVQNLLVVGPGTINGNGNIWWKNSCKIKPQP 213
Query: 132 VSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGD 191
+ P V F C N+ V N+ +++ + C N +++
Sbjct: 214 PCGTYA---------PTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAP 264
Query: 192 FNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI + ++ N I+ I TGDD I
Sbjct: 265 EDSPNTDGIHVTNTQNITISSSVIGTGDDCI 295
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 14 IHSVIDFGAKGDG-IHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRL----KSHV 68
++ + FGA GDG + A + + I C P + P G +L + KS V
Sbjct: 51 VYDITKFGAVGDGSTNTFKAFLNTWIQVCDS-PVPATLLVPKGTFLAGPVIFAGPCKSKV 109
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
T+N+ T++ PE W+ L E ++ +TG G G+
Sbjct: 110 TVNVI--GTIIATTSGYATPE----WF--LFERVDNLVLTGTGTFHGKGEAV-------- 153
Query: 129 NVMVSWNHTGACSGDECR--PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDM 186
W G +C P + F +NV + + + + +V+ +N I+++
Sbjct: 154 -----WKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNI 208
Query: 187 SIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ +PN DGI + +++N I I TGDD +
Sbjct: 209 KLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCV 244
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSA-IDACPPGNKPCQVRFPP--GEYLTATIRL----KSHV 68
SV DFGA+GDG DT A + A DAC G+ V P YL I KS +
Sbjct: 86 SVDDFGARGDGTD-DTKAFEKAWKDACSSGS----VLIVPENKNYLLKQITFSGPCKSDL 140
Query: 69 TLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIK 128
+ I T+ D+ + + ++ E+ +++ + GGG +G + + + K
Sbjct: 141 RVKIR--GTIEASSDQSDWVGHNRKRWIEF-EDISNLTLEGGGTSNGNGETWWDSSCKRK 197
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
+ C + P + F C+N+ V ++ +++ L +C + ++ +
Sbjct: 198 KSL-------PC---KSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMV 247
Query: 189 YGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++PN DGI I + + I TGDD I
Sbjct: 248 TAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCI 281
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 3 LLLLLS---TTHIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLT 59
+LL L+ + + + +GA + A + + +AC P + P G +
Sbjct: 12 VLLFLAHFGESQTGVFDITKYGANSNA-DISEALLNAFKEACQ-STSPSTIVIPKGTFTM 69
Query: 60 ATIRL----KSHVTLNIHEDATLLGGPRIEDYPEESSRWYVV--LAENATD-VGITGGGV 112
++L KS + L I ATL P + S+ V L N D ++GGG+
Sbjct: 70 NQVKLEGPCKSPLELQIQ--ATL-------KAPSDPSQLKVGEWLTVNKLDQFTMSGGGI 120
Query: 113 VDGQAMKFVVTKNEIKNVMVSW--NHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAY 170
+DGQA +W + C+ P + F N + ++ +
Sbjct: 121 LDGQAA-------------AAWECKQSKKCNK---LPNNLSFNSLTNSTIKDITTLDSKS 164
Query: 171 WCLHIVRCDN-TFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTG 229
+ +++ +C N TFIR ++ N+PN DGI + S++ IT TGDD I T
Sbjct: 165 FHVNVNQCKNLTFIR-FNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETE 223
Query: 230 PLY 232
LY
Sbjct: 224 QLY 226
>sp|Q00359|PGLRX_COCCA Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1
Length = 446
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 97/260 (37%), Gaps = 52/260 (20%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIE---- 85
D+A I SA+ C N V FP G+ T L D T L G ++
Sbjct: 67 DSANILSAVKQC---NNGGHVVFPKGQQFTIGTAL----------DLTFLNGIDLDIQGT 113
Query: 86 -DYPEESSRW----YVVLAENAT--------DVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
+ ++ W + + +NAT D+ + GGG +DG
Sbjct: 114 IQFTNDTDYWQANSFKQVFQNATTFFQLGGKDINVYGGGTLDGNGQ-------------- 159
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDF 192
+W A RP L G +G +N + +++ R W + ++ I+GD
Sbjct: 160 AWYDLYAKDIYILRPILFGLIGAKNAKISDLKFRYSPQWYTLVANSSQVVFSNIDIFGDS 219
Query: 193 NTPN----NDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAI 248
+ N DG D S+N +I I+ GDD + K P + + S I
Sbjct: 220 KSKNPAKNTDGWDTYRSDNIIIQNSNINNGDDCVSFK----PNSTNILVQNLVCNGSHGI 275
Query: 249 KLGSASWFDFKALVFDNITI 268
+GS + + + +NI +
Sbjct: 276 SVGSLGQYPGEVDIVENILV 295
>sp|Q9UUZ2|XGHA_ASPTU Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis
GN=xghA PE=2 SV=1
Length = 406
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 36/254 (14%)
Query: 10 THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSH 67
+ IH +V A GD D AI A+ +C G + FP G YL + + L S
Sbjct: 29 SSIHARAVCTPTAGGDSSTDDVPAITEALSSCGNGG---TIVFPEGSTYYLNSVLDLGSC 85
Query: 68 VTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDV---GITGGGVVDGQAMKFVVTK 124
+I + LL DY S R ++ N + +TG GV+DG
Sbjct: 86 SDCDIQVEG-LLKFASDTDY--WSGRTAMISVSNVDGLKLRSLTGSGVIDGNGQD----- 137
Query: 125 NEIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIR 184
+W+ A RP L+ G N+ + +R + P + V+ T +
Sbjct: 138 --------AWDLF-ASDSSYSRPTLLYITGGSNLEISGLRQKNPPN-VFNSVKGGATNVV 187
Query: 185 DMSIYGDFNTP------NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATD 238
++ D N+ N DG DI +S IT V + DD + K P N D
Sbjct: 188 FSNLKMDANSKSDNPPKNTDGFDIGESTYVTITEVTVVNDDDCVAFK----PSSNYVTVD 243
Query: 239 SWIRTKSSAIKLGS 252
+ T S I +GS
Sbjct: 244 TISCTGSHGISVGS 257
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 86/249 (34%), Gaps = 44/249 (17%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
D + IQ+AID CP G V+ GE +L+ +++LKS VTL I TL D+
Sbjct: 74 DASRIQTAIDNCPAGQAVRLVKGSAGESGFLSGSLKLKSGVTLWIDTGVTLFASRNPADF 133
Query: 88 PEESSRWYVVLAENATDVG-------ITGGGVVDGQAMKF----VVTKNEIKNVMVSWN- 135
N G G+V + +VT N + W+
Sbjct: 134 DNGVGTCGTATTSNTKSCNALIVARDTVGSGIVGDGIIDGRGGSLVTSGPNANRLTWWDI 193
Query: 136 -HTGACSG-DECRPRLVGFL-----------------------GCRNVNVWNVRLREPAY 170
+ G ++ PRLV G V W +++ P+
Sbjct: 194 AYLNKTKGLNQQNPRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVTAWGIKIVTPSL 253
Query: 171 -WCLHIVRCDNTFIRDMSIYGDFNTP----NNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ + +C D TP N DG D S N V+ I TGDD + K
Sbjct: 254 AYTVPGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSYISTGDDHVAIK 313
Query: 226 TYTGPLYNL 234
G NL
Sbjct: 314 ASGGATRNL 322
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 77/213 (36%), Gaps = 23/213 (10%)
Query: 15 HSVIDFGAKGDGIHYDTAAIQSA-IDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLN-- 71
++V GAK DG T A SA AC N P + P G + + N
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVPAGTFFLRDVVFSGPCKNNAI 86
Query: 72 IHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVM 131
A L P ++ W N + GG++DGQ K
Sbjct: 87 TFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTIS---GGILDGQGTALWACK------- 136
Query: 132 VSWNHTGACSGDEC--RPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
AC G+ C +GF N+ V + + + I N ++ + +
Sbjct: 137 -------ACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVS 189
Query: 190 GDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
N+PN DGI ++ S+ I +I TGDD +
Sbjct: 190 RSGNSPNTDGIHVQMSSGVTILNSKIATGDDCV 222
>sp|Q5ASG9|PGLX1_EMENI Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-1
PE=1 SV=1
Length = 434
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 86/221 (38%), Gaps = 41/221 (18%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGG 81
+ GDG D+A I SA+ +C G K V F E TI +T H D +LG
Sbjct: 55 SHGDG-RDDSAFILSALKSCNNGGK---VVF--AEEKEYTIGTALDLTFLKHVDLEILG- 107
Query: 82 PRIE-----DYPEESSRWYVVLAENAT--------DVGITGGGVVDGQAMKFVVTKNEIK 128
RI+ DY + +S + +NAT DV + GGG +DG + E
Sbjct: 108 -RIQFTNDTDYWQANSFKHTF--QNATTFFQLGGEDVNVYGGGTLDGNGQIWYDLYAEDP 164
Query: 129 NVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSI 188
++ RP L G +G + ++LR W + + + I
Sbjct: 165 LIL--------------RPILFGVIGLHGGTIGPLKLRYSPQWYQLVANSSDVLFDGIDI 210
Query: 189 YG----DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
G + N DG D S N VI I+ GDD + K
Sbjct: 211 SGYSKSENEAKNTDGWDTYRSKNIVIQNSVINNGDDCVSFK 251
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNN 207
R + + C + +R A W +H C++ +I ++PN DG + E N
Sbjct: 23 RGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRN 82
Query: 208 TVITRVQIDTGDDAICPKT 226
+I+ V+ GDD I K
Sbjct: 83 VMISGVRFSVGDDCIAVKA 101
>sp|A2QK83|XGHA_ASPNC Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=xghA PE=3 SV=1
Length = 406
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 95/251 (37%), Gaps = 30/251 (11%)
Query: 10 THIHIHSVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSH 67
+ +H +V A GD D AI A+ +C G + FP G YL + + L +
Sbjct: 29 SSLHARAVCTPTAGGDSSTDDVPAITEALSSCGNGG---TIVFPEGSTYYLNSVLDLGNC 85
Query: 68 VTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEI 127
+I + L + + ++ V + +TG GV+DG
Sbjct: 86 SNCDIQVEGLLKFASDTDYWSGRTAMISVSDVDGLKLRSLTGSGVIDGNGQD-------- 137
Query: 128 KNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMS 187
+W+ A RP L+ G N+ + +R + P + V+ T + +
Sbjct: 138 -----AWDLF-ASDSSYSRPTLLYITGGSNLEISGLRQKNPPN-VFNSVKGGATNVVFSN 190
Query: 188 IYGDFNTP------NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWI 241
+ D N+ N DG DI +S IT V + DD + K P N D+
Sbjct: 191 LKMDANSKSDNPPKNTDGFDIGESTYVTITEVTVVNDDDCVALK----PSSNYVTVDTIS 246
Query: 242 RTKSSAIKLGS 252
T S I +GS
Sbjct: 247 CTGSHGISVGS 257
>sp|A1DBT5|XGHA_NEOFI Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=xghA PE=3 SV=1
Length = 406
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 88/230 (38%), Gaps = 28/230 (12%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
D AI+ AI +C G + FP G YL + + L +I + L+ E +
Sbjct: 49 DVPAIRKAISSCGNGG---TIVFPAGSTYYLNSVLDLAGCSNCDIQVEGLLMFSGSTEYW 105
Query: 88 PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRP 147
+++ + +TG GV+DG +N + A + D RP
Sbjct: 106 GGKTAMININKINALKLRSLTGSGVIDGNG----------QNAYDLF----ASNSDYERP 151
Query: 148 RLVGFLGCRNVNVWNVRLREP--AYWCLHIVRCDNTFIR---DMSIYGDFNTPNNDGIDI 202
L+ G N+ V +R R P + + D TF D + D N DG DI
Sbjct: 152 TLLYITGGSNIEVSGLRQRNPPNVFNSVKGDAKDVTFTNLRMDATSRSDNPPKNTDGFDI 211
Query: 203 EDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGS 252
S + I+ V + DD + K P N ++ T S I +GS
Sbjct: 212 GSSTHVTISSVSVSNDDDCVALK----PGCNYVTVENVTCTGSHGISVGS 257
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 26/198 (13%)
Query: 31 TAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIR---LKSHVTLNIHEDATLLGGPRIED 86
TAA+ A + P QV P G++ L T+ KS + + + GG
Sbjct: 36 TAAVLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGST--- 92
Query: 87 YPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECR 146
+ RW V+ E + GGG DG+ +W EC+
Sbjct: 93 --QGKDRW--VVFEKINGFKLNGGGTFDGEGN-------------AAWKANNCHKTFECK 135
Query: 147 --PRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIED 204
P V F N + +V + + +++ N ++ I +PN DGI +
Sbjct: 136 KLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGR 195
Query: 205 SNNTVITRVQIDTGDDAI 222
I +I TGDD I
Sbjct: 196 CEGVKILNTKIATGDDCI 213
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 50 VRFPPGEYLTATIRLKSH----VTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDV 105
+ P GEY+ ++ K VTL ++ + P + + W + EN D
Sbjct: 103 ITVPKGEYMVESLEFKGPCKGPVTLELNGN---FKAPATVKTTKPHAGW--IDFENIADF 157
Query: 106 GITGG-GVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECR--PRLVGFLGCRNVNVWN 162
+ G + DGQ ++W +C P + F G N + +
Sbjct: 158 TLNGNKAIFDGQGS-------------LAWKANDCAKTGKCNSLPINIRFTGLTNSKINS 204
Query: 163 VRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
+ + ++I+ C N + D+ I + N DGI I SN + +I TGDD +
Sbjct: 205 ITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCV 264
>sp|B8NK45|RHGA_ASPFN Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=rhgA PE=3 SV=1
Length = 467
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 33/213 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHED 75
V D+GAK D +AI+ A D C G V P G+Y +++ ++L I D
Sbjct: 42 VQDYGAKADKETDIGSAIEKAWDDCAEGGV---VYIPSGDYAMSSRLKLSGGKASAIQLD 98
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV--VTKNEIKNVMVS 133
+ Y S + + E+++D +F ++ I+ +
Sbjct: 99 GII--------YRTGSDGGNLFMIEHSSD-------------FEFFSSTSQGAIQGLGYE 137
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
++ G+ +G PRL+ F + +V +V L + + L + C N I +M+I G +
Sbjct: 138 FHKDGSLNG----PRLLRFYDVTDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRGG-D 192
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ DG+DI S N + V++ D+ + K+
Sbjct: 193 SGGLDGVDIW-SENVWVHDVEVTNKDECVTVKS 224
>sp|B0Y9F8|XGHA_ASPFC Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=xghA PE=3
SV=2
Length = 406
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 30/231 (12%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
D AI+ AI +C G + FP G YL + + L +I + L E +
Sbjct: 49 DVPAIRKAIASCGNGG---TIVFPAGSTYYLNSVLDLAGCSNCDIQVEGVLKFSGSTEYW 105
Query: 88 PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRP 147
+++ + + +TG GV+DG +N N+ RP
Sbjct: 106 GGKTAMLNIDMINGLRLRSLTGSGVIDGNG------QNAYDRFASDKNYK--------RP 151
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN---TF--IRDMSIYGDFNTPNN-DGID 201
L+ G N+ V +R + P + V+ D TF +R + N P N DG D
Sbjct: 152 TLLYITGGSNIEVSGLRQKNPPNV-FNSVKGDTQHVTFKNLRMDATSNSQNPPKNTDGFD 210
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGS 252
I S + I+ V + DD + K P N + T S I +GS
Sbjct: 211 IGASTHVTISSVSVTNDDDCVAFK----PGSNYVTVEDVTCTGSHGISVGS 257
>sp|Q4WBT4|XGHA_ASPFU Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=xghA PE=3 SV=2
Length = 406
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 30/231 (12%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGE--YLTATIRLKSHVTLNIHEDATLLGGPRIEDY 87
D AI+ AI +C G + FP G YL + + L +I + L E +
Sbjct: 49 DVPAIRKAIASCGNGG---TIVFPAGSTYYLNSVLDLAGCSNCDIQVEGVLKFSGSTEYW 105
Query: 88 PEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRP 147
+++ + + +TG GV+DG +N N+ RP
Sbjct: 106 GGKTAMLNIDMINGLRLRSLTGSGVIDGNG------QNAYDRFASDKNYK--------RP 151
Query: 148 RLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDN---TF--IRDMSIYGDFNTPNN-DGID 201
L+ G N+ V +R + P + V+ D TF +R + N P N DG D
Sbjct: 152 TLLYITGGSNIEVSGLRQKNPPNV-FNSVKGDTQHVTFKNLRMDATSNSQNPPKNTDGFD 210
Query: 202 IEDSNNTVITRVQIDTGDDAICPKTYTGPLYNLTATDSWIRTKSSAIKLGS 252
I S + I+ V + DD + K P N + T S I +GS
Sbjct: 211 IGASTHVTISSVSVTNDDDCVAFK----PGSNYVTVEDVTCTGSHGISVGS 257
>sp|B8NG16|PGLRX_ASPFN Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgaX PE=3 SV=1
Length = 433
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGG 81
+ GDG D I +A+ C G K V F E TI +T H D +LG
Sbjct: 53 SNGDGTD-DAPYILAALKQCNNGGK---VVF--AEDKEYTIGTALDMTFLKHVDLEILGK 106
Query: 82 PRIE---DYPEESSRWYVVLAENAT--------DVGITGGGVVDGQAMKFVVTKNEIKNV 130
DY +E+S + +NAT DV + GGG ++G + E +
Sbjct: 107 ITFTPDTDYWQENSFKHTF--QNATTFFNLGGTDVNVYGGGELNGNGQVWYDLYAEDALI 164
Query: 131 MVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG 190
+ RP LVG +G + ++LR W + + + I G
Sbjct: 165 L--------------RPILVGIIGLHGGTIGPLKLRYSPQWYQLVANSSDVLFDGIDISG 210
Query: 191 ----DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
+ N DG D S+N VI I+ GDD + K
Sbjct: 211 YSSSENEAKNTDGWDTYRSSNIVIQNSVINNGDDCVSFK 249
>sp|Q2U293|RHGA_ASPOR Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rhgA PE=3 SV=1
Length = 467
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEY-LTATIRLKSHVTLNIHED 75
V D+GAK D +AI+ A D C G V P G+Y + + ++L I D
Sbjct: 42 VQDYGAKADKETDIGSAIEKAWDDCAEGGV---VYIPSGDYAMFSRLKLSGGKASAIQLD 98
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFV--VTKNEIKNVMVS 133
+ Y S + + E+++D +F ++ I+ +
Sbjct: 99 GII--------YRTGSDGGNLFMIEHSSD-------------FEFFSSTSQGAIQGLGYE 137
Query: 134 WNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFN 193
++ G+ +G PRL+ F + +V +V L + + L + C N I +M+I G +
Sbjct: 138 FHKDGSLNG----PRLLRFYDVTDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRGG-D 192
Query: 194 TPNNDGIDIEDSNNTVITRVQIDTGDDAICPKT 226
+ DG+DI S N + V++ D+ + K+
Sbjct: 193 SGGLDGVDIW-SENVWVHDVEVTNKDECVTVKS 224
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 18/179 (10%)
Query: 49 QVRFPPGEYLTATIRLKS--HVTLNIHEDATLLGGPRIEDYPEESSRWYVVLAENATDVG 106
++ P G Y I LK + + D T+ P + + +W+ L + +
Sbjct: 57 KIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQA-PADPSVIKGTEQWFKFLYMD--HLT 113
Query: 107 ITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTGACSGDECRPRLV---GFLGCRNVNVWNV 163
++G GV DGQ V A SG ++ GF N V V
Sbjct: 114 LSGKGVFDGQGA----------TVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGV 163
Query: 164 RLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAI 222
++ + + + C N +I ++PN DGI + S + I I TGDD +
Sbjct: 164 TSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCV 222
>sp|Q0CGP0|PGLRX_ASPTN Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaX PE=3 SV=1
Length = 434
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 79/220 (35%), Gaps = 39/220 (17%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGG 81
+ GDG D A + SA+ C G K V F + T L +T H D +LG
Sbjct: 55 SHGDGTD-DAAFVLSALRKCNNGGK---VVFDADKEYTIGTALD--MTFLRHVDLEILG- 107
Query: 82 PRIEDYPEESSRWYV------------VLAENATDVGITGGGVVDGQAMKFVVTKNEIKN 129
RI+ + ++ W TDV + G G +DG
Sbjct: 108 -RIQ-FTNDTDYWQAHAFRHGFQNATTFFQLGGTDVNVYGSGTLDGNGQ----------- 154
Query: 130 VMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIY 189
W A RP L+G +G + ++LR W + + + I
Sbjct: 155 ---VWYDLYAAEPLTLRPILLGVIGLHGGTIGPLKLRYSPQWYQLVANSTDVLFDGIDIS 211
Query: 190 GDFNTPNN----DGIDIEDSNNTVITRVQIDTGDDAICPK 225
G ++ N DG D S+N VI ++ GDD + K
Sbjct: 212 GYSSSKNTAKNTDGWDTYRSSNIVIQNSVVNNGDDCVSFK 251
>sp|P87160|RHGA_ASPNG Rhamnogalacturonase A OS=Aspergillus niger GN=rhgA PE=1 SV=1
Length = 446
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT-IRLKSHVTLNIHED 75
V+D+GA D +A+ A DAC G + PPG+Y T + L I D
Sbjct: 41 VLDYGAVADNSTDIGSALSEAWDACSDGG---LIYIPPGDYAMDTWVSLSGGKATAIILD 97
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
T+ Y + ++L EN++D F + N + +
Sbjct: 98 GTI--------YRTGTDGGNMILVENSSD---------------FELYSNSSSGAVQGFG 134
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
+ GD PR++ N V ++ L + + + C + + +M+I G N+
Sbjct: 135 YVYHREGDLDGPRILRLQDVSNFAVHDIILVDAPAFHFVMDDCSDGEVYNMAIRGG-NSG 193
Query: 196 NNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNL 234
DGID+ S N + V++ D+ + K GP N+
Sbjct: 194 GLDGIDVWGS-NIWVHDVEVTNKDECVTVK---GPANNI 228
>sp|Q00293|PGLRX_ASPTU Exopolygalacturonase X OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1
Length = 435
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 33/217 (15%)
Query: 22 AKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT---------IRLKSHVTLNI 72
+ GDG D+ I SA++ C G K V EY+ T I L+ T+
Sbjct: 54 SHGDGTD-DSDYILSALNQCNHGGKV--VFDEDKEYIIGTALNMTFLKNIDLEVLGTILF 110
Query: 73 HEDATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMV 132
D + + ++ ++ + E DV + GGG ++G + E ++
Sbjct: 111 TNDTDYWQANSFKQGFQNATTFFQLGGE---DVNMYGGGTINGNGQVWYDLYAEDDLIL- 166
Query: 133 SWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYG-- 190
RP L+G +G + ++LR + + N + I G
Sbjct: 167 -------------RPILMGIIGLNGGTIGPLKLRYSPQYYHFVANSSNVLFDGIDISGYS 213
Query: 191 --DFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPK 225
D N DG D SNN VI I+ GDD + K
Sbjct: 214 KSDNEAKNTDGWDTYRSNNIVIQNSVINNGDDCVSFK 250
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 78/211 (36%), Gaps = 36/211 (17%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIE---D 86
D+ I A+ C G K V F + T L +T H D +LG + D
Sbjct: 62 DSKNIMKALHKCNNGGK---VVFDANKVYTVGTALD--MTFLKHIDLEVLGKIQFTNDTD 116
Query: 87 YPEESSRWYVVLAENAT--------DVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
Y + +S + +NAT DV + GGG +DG W
Sbjct: 117 YWQANSFKHGF--QNATTFFQLGGEDVNVYGGGTLDGNGQ--------------VWYDLY 160
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNN- 197
A RP L G +G + + ++LR W + + + I G ++ N
Sbjct: 161 AEDALILRPILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEA 220
Query: 198 ---DGIDIEDSNNTVITRVQIDTGDDAICPK 225
DG D S+N VI I+ GDD + K
Sbjct: 221 KNTDGWDTYRSDNIVIQNSVINNGDDCVSFK 251
>sp|B0YDE8|PGLRX_ASPFC Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2
Length = 432
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 78/211 (36%), Gaps = 36/211 (17%)
Query: 30 DTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHEDATLLGGPRIE---D 86
D+ I A+ C G K V F + T L +T H D +LG + D
Sbjct: 62 DSKNIMKALHKCNNGGK---VVFDANKVYTVGTALD--MTFLKHIDLEVLGKIQFTNDTD 116
Query: 87 YPEESSRWYVVLAENAT--------DVGITGGGVVDGQAMKFVVTKNEIKNVMVSWNHTG 138
Y + +S + +NAT DV + GGG +DG W
Sbjct: 117 YWQANSFKHGF--QNATTFFQLGGEDVNVYGGGTLDGNGQ--------------VWYDLY 160
Query: 139 ACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTPNN- 197
A RP L G +G + + ++LR W + + + I G ++ N
Sbjct: 161 AEDALILRPILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEA 220
Query: 198 ---DGIDIEDSNNTVITRVQIDTGDDAICPK 225
DG D S+N VI I+ GDD + K
Sbjct: 221 KNTDGWDTYRSDNIVIQNSVINNGDDCVSFK 251
>sp|A2QYE5|RHGA_ASPNC Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rhgA PE=3 SV=1
Length = 446
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 17 VIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTAT-IRLKSHVTLNIHED 75
V+D+GA D +A+ A DAC G + PPG+Y T + L I D
Sbjct: 41 VLDYGAVADNSTDIGSALSEAWDACSDGG---LIYIPPGDYAMDTWVSLSGGKATAIILD 97
Query: 76 ATLLGGPRIEDYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKNEIKNVMVSWN 135
T+ Y + ++L EN++D F + N + +
Sbjct: 98 GTI--------YRTGTDGGNMILVENSSD---------------FELYSNSSSGAVQGFG 134
Query: 136 HTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHIVRCDNTFIRDMSIYGDFNTP 195
+ GD PR++ N V ++ L + + + C + + +M+I G N+
Sbjct: 135 YVYHREGDLDGPRILRLQDVSNFAVHDIILVDAPAFHFVMDDCSDGEVYNMAIRGG-NSG 193
Query: 196 NNDGIDIEDSN 206
DGID+ SN
Sbjct: 194 GLDGIDVWGSN 204
>sp|Q2EQQ2|RGXA_ASPNG Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
niger GN=rgxA PE=2 SV=1
Length = 438
Score = 38.1 bits (87), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 45/274 (16%)
Query: 16 SVIDFGAKGDGIHYDTAAIQSAIDACPPGNKPCQVRFPPGEYLTATIRLKSHVTLNIHE- 74
+VI G D D I SA+D C +V P R+ +H+T + E
Sbjct: 33 TVIPLGNGQD----DVPNILSAVDECGQ-TSGGRVVLPAPYTYRINQRMTTHLTDSRLEI 87
Query: 75 DATLLGGPRIE---------DYPEESSRWYVVLAENATDVGITGGGVVDGQAMKFVVTKN 125
TLL I+ D+ +SS W + + D G GGV DG +
Sbjct: 88 GGTLLFSDDIDYWVNNSYRVDFQNQSSAWRITGHDYVVDGGPHRGGV-DGNGQLWYTWAK 146
Query: 126 EIKNVMVSWNHTGACSGDECRPRLVGFLGCRNVNVWNVRLREPAYWCLHI-----VRCDN 180
NV RP V + N+ +R+P +W + + + DN
Sbjct: 147 GGSNVF-------------GRPMPVHVFESTRATLRNLAIRQPQFWAVLVDSSSHINLDN 193
Query: 181 TFIR------DMSIYGDFNTPNNDGIDIEDSNNTVITRVQIDTGDDAICPKTYTGPLYNL 234
++ +S G++ N DGID S++ IT GDDA+ + G N+
Sbjct: 194 FYVNATNHDSSVSPEGEW-VQNTDGIDTYRSDHITITNWVYQGGDDAVA---FKGNSTNI 249
Query: 235 TATDSWIRTKSSAIKLGSASWFDFKALVFDNITI 268
+ + I GS + + + +N+T+
Sbjct: 250 HVENVTVY-GGPGIAFGSLGQYPDRTDIVENVTV 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,175,787
Number of Sequences: 539616
Number of extensions: 4768407
Number of successful extensions: 9126
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 9007
Number of HSP's gapped (non-prelim): 115
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)