BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038767
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVS1|FBK23_ARATH F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana
GN=At1g57790 PE=2 SV=1
Length = 352
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 39/343 (11%)
Query: 19 DLPLTIINLIVSRLYVVYQIRFRAVCKRW--RSVDIQYRDKFTWLMGY--NSHSCYLYDP 74
DLPL +++ +++ L + +R VCK W +V ++ DK WLM + ++ YDP
Sbjct: 15 DLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDKSPWLMYFPETKNTYDFYDP 74
Query: 75 CHKQRFTVFISDKNRTTLLGARPLDSKNGWVLFEGEK------------NIINLPVWREF 122
+ +++T+ + +L+G SK+GW+L E +++ LP F
Sbjct: 75 SNCKKYTMELP----KSLVGFIVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFLHLF 130
Query: 123 SIAK-ATFSATPVSPDCVIFVIWVGVMEISCISICRPGDTTWTELRFQDNYRYV--KNMV 179
+ + FS+ P S +CV+F I I PG T WT ++ + + V N+V
Sbjct: 131 TYYQLVGFSSAPTSSECVVFTIKDYDPGHVTIRTWSPGQTMWTSMQVESQFLDVDHNNVV 190
Query: 180 RADGFLYCSFFSLDAIVAFNVASQNWEILPYPPSIL------FMYKYLTEYDGSLLILAK 233
++G YC + + F+ + + W +L PP K++ Y G +L++
Sbjct: 191 FSNGVFYC-LNQRNHVAVFDPSLRTWNVLDVPPPRCPDDKSWNEGKFMVGYKGDILVIRT 249
Query: 234 VVNSSGYRVFTLNRSQMDWFEIECLDDRALFMG-ASCLWWVPVEKGCAFANIMHWFGPYS 292
N VF L+ ++ W E + L +F+ SC V+ G ++ +F
Sbjct: 250 YENKDPL-VFKLDLTRGIWEEKDTLGSLTIFVSRKSCESRTYVKDGMLRNSV--YFPELC 306
Query: 293 YIRDQWSEFIRKPVESDSSKVAPRIRGYEYWKEEDTTQIWIQP 335
Y Q + D + R ++ K+ + IWI+P
Sbjct: 307 YNEKQSVVY-----SFDEGRYHLREHDLDWGKQLSSDNIWIEP 344
>sp|Q9XIA2|FB49_ARATH F-box protein At1g49360 OS=Arabidopsis thaliana GN=At1g49360 PE=2
SV=1
Length = 481
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 60/339 (17%)
Query: 20 LPLTIINLIVSRLYVVYQIRFRAVCKRWRSV--DIQYRDKFTWLMGYNSH-----SCYLY 72
LP ++ LI+SRL IR VCK W + ++ + + WL+ +++ S +
Sbjct: 111 LPSDLVRLILSRLSFKDNIRSSTVCKAWGDIAASVRVKSRRCWLLYHDAFQDKGVSYGFF 170
Query: 73 DPCHKQRFTVFISDKNRTTLLGARP-LDSKNGWVLFEGEKNI--------------INLP 117
DP K++ + N L + L SK+GW+L ++ I+LP
Sbjct: 171 DPVEKKK----TKEMNLPELSKSSGILYSKDGWLLMNDSLSLIADMYFFNPFTRERIDLP 226
Query: 118 VWR--EFSIAKATFSATPVSPDCVIFVIWVGVMEISC-----ISICRPGDTTWTELRFQD 170
R E FS P C++F G+ IS IS RPG TTW F +
Sbjct: 227 RNRIMESVHTNFAFSCAPTKKSCLVF----GINNISSSVAIKISTWRPGATTWLHEDFPN 282
Query: 171 ----NYRYVKNMVRADGFLYCSFFSLDAIVAFNVASQNWEILPYPPSILF--MYKYLTEY 224
+R + N++ +DG Y + S A+ F+ ++ W +LP P + +++TEY
Sbjct: 283 LFPSYFRRLGNILYSDGLFYTA--SETALGVFDPTARTWNVLPVQPIPMAPRSIRWMTEY 340
Query: 225 DGSLLILAKVVNSSGYRVFTLNRSQMDWFEIECLDDRALFMG-ASCLWWVPVEKGCAFAN 283
+G + ++ +S V+ LNR + W + E LD ++F+ SC+ + + +N
Sbjct: 341 EGHIFLVD--ASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVMTYGLTG--SMSN 396
Query: 284 IMHWFGPYSYIRDQWSEFIRKPVESDSSKVAPRIRGYEY 322
I+++ WS FI + + S R Y+Y
Sbjct: 397 ILYF----------WSRFINERRSTKSPCPFSRNHPYKY 425
>sp|Q9LSA5|FBK62_ARATH F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana
GN=At3g18720 PE=2 SV=1
Length = 380
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 53/304 (17%)
Query: 3 GGIKEKKQKLERRS-RSDLPLTIINLIVSRLYVVYQIRFRAVCKRW--RSVDIQYRDKFT 59
GG K+KK + R +P ++ I+SRL + I VCK W +V ++
Sbjct: 34 GGPKKKKNCVNRGLWDKQIPTDLLQEILSRLGLKANIHASLVCKTWLKEAVSVRKFQSRP 93
Query: 60 WLM-------GYNSHSCYLYDP----CHKQRFTVFISDKNRTTLLGARPLDSKNGWVL-- 106
WL G L++P H +F +N+ +K+GW+L
Sbjct: 94 WLFYPQSQRGGPKEGDYVLFNPSRSQTHHLKFPELTGYRNKLAC-------AKDGWLLVV 146
Query: 107 ------------FEGEKNIINLPVWREFSIAKA-TFSATPVSPDCVI--FVIWVGVMEIS 151
F GE+ I LP + S TFSA P S C + F + +
Sbjct: 147 KDNPDVVFFLNPFTGER--ICLPQVPQNSTRDCLTFSAAPTSTSCCVISFTPQSFLYAVV 204
Query: 152 CISICRPGDTTWTELRFQDNYRY---VKNMVRADGFLYCSFFSLDAIVAFNVASQNWEIL 208
+ RPG++ WT F D RY + + ++G YC + + F+ + + W +L
Sbjct: 205 KVDTWRPGESVWTTHHF-DQKRYGEVINRCIFSNGMFYC-LSTSGRLSVFDPSRETWNVL 262
Query: 209 PYPPSILFMYK-------YLTEYDGSLLIL-AKVVNSSGYRVFTLNRSQMDWFEIECLDD 260
P P F K ++TE++G + ++ + VN+ F LN W E++ +
Sbjct: 263 PVKPCRAFRRKIMLVRQVFMTEHEGDIFVVTTRRVNNRKLLAFKLNLQGNVWEEMKVPNG 322
Query: 261 RALF 264
+F
Sbjct: 323 LTVF 326
>sp|Q1G391|FB217_ARATH F-box protein At4g00893 OS=Arabidopsis thaliana GN=At4g00893 PE=2
SV=1
Length = 388
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 5 IKEKKQKLERRSRSDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQYR--DKFTWLM 62
++ +K+ S +DLP ++I I+ L + IR A CK W + R DK WLM
Sbjct: 33 FQDSSKKIMNPSFADLPSSLIEEIMLLLVLKDNIRASAACKSWYEAGVSVRVVDKHPWLM 92
Query: 63 GYNSHSCY--LYDPCHKQRFTVFISDKNRTTL-------LGARPLDSKNGWVLFEGEKNI 113
+ DP H + T+ + + +T+ L R S + + ++I
Sbjct: 93 CFPKRGNLFEFRDPLHWKLHTLDLPELAESTVCYSRFGWLLMRKASSNDVFFFNPFSRDI 152
Query: 114 INLPVWREFSIAKATFSATPVSPDCVIFVIWVGVMEIS--CISICRPGDTTWTELRFQDN 171
I+LP+ E + FS P S DCV+ I E++ +S C PG T W F
Sbjct: 153 ISLPMC-ELDFQQIAFSCPPTSDDCVLLAIKFVPGEVNRVTVSTCNPGATKWITNDFPTF 211
Query: 172 YRYV---KNMVRADGFLYCSFFSLDAIVAFNVASQNWEIL-------PYPPSILFMY--- 218
R N+V YC F + + +F + + W + PY +M+
Sbjct: 212 LRLFYMQSNLVYRRDRFYC-FNAEGTLYSFEPSYREWSYICADKLRCPYVHENQYMWCGK 270
Query: 219 -KYLTEYDGSLLILAKVVNSSG--YRVFT-----LNRSQMD 251
+L E G L ++ N Y++F+ L+R+ +D
Sbjct: 271 AVFLVEKKGELFVMFTCSNEKPMVYKLFSMKWKELSRTTLD 311
>sp|Q9LXZ3|FB204_ARATH F-box protein At3g56470 OS=Arabidopsis thaliana GN=At3g56470 PE=2
SV=1
Length = 367
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 31/272 (11%)
Query: 19 DLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQYRDKFT--WLMGYNS--HSCYLYDP 74
+LP ++ L++SRL + IR AVCK W + R T WL+ ++ S LYDP
Sbjct: 31 NLPCDLLQLVISRLPLKDNIRASAVCKTWHEACVSLRVIHTSPWLIYFSKTDDSYELYDP 90
Query: 75 CHKQRFTVFISDKNRTTLLGARPLDSKNGWVLFEG------------EKNIINLP-VWRE 121
++ + + L G R SK+GW+L ++ + +P +W
Sbjct: 91 SMQKNCNLHFPE-----LSGFRVCYSKDGWLLMYNPNSYQLLFFNPFTRDCVPMPTLWMA 145
Query: 122 FSIAKATFSATPVSPDCVIF----VIWVGVMEISCISICRPGDTTWTELRFQDNYRYVKN 177
+ + FS P S C++F V W + + + + T+ + R Q N+ +
Sbjct: 146 YD-QRMAFSCAPTSTSCLLFTVTSVTWNYITIKTYFANAKEWKTSVFKNRLQRNFNTFEQ 204
Query: 178 MVRADGFLYCSFFSLDAIVAFNVASQNWEILPYPPSILFMYK--YLTEYDGSLLILAKVV 235
+V ++G YC + + F+ + W +LP P ++TE+ G + ++ +
Sbjct: 205 IVFSNGVFYC-LTNTGCLALFDPSLNYWNVLPGRPPKRPGSNGCFMTEHQGEIFLIY-MY 262
Query: 236 NSSGYRVFTLNRSQMDWFEIECLDDRALFMGA 267
V L+ + +W E + L ++ A
Sbjct: 263 RHMNPTVLKLDLTSFEWAERKTLGGLTIYASA 294
>sp|Q1G3I7|FB232_ARATH F-box protein At4g12382 OS=Arabidopsis thaliana GN=At4g12382 PE=2
SV=1
Length = 138
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 10 QKLERRSRSDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQYR--DKFTWLMGYNSH 67
+K+ S +DLP ++I +I+S L + IR A CK W V + R +K WL+ +
Sbjct: 3 KKIMNPSFADLPSSLIEVIMSHLALKNNIRASAACKSWYEVGVSVRVVEKHPWLICFPKR 62
Query: 68 SCY--LYDPCHKQRFTVFISDKNRTTL-------LGARPLDSKNGWVLFEGEKNIINLP 117
DP H + +T+ + + +T+ L R SK+ + ++II+LP
Sbjct: 63 GNLFEFRDPLHWKLYTLGLPELAESTVCYSRFGWLLMRKATSKDVFFFNPFSRDIISLP 121
>sp|Q9FLP7|FB294_ARATH Putative F-box protein At5g55150 OS=Arabidopsis thaliana
GN=At5g55150 PE=4 SV=2
Length = 360
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 124 IAKATFSATPVSPDCVIFVIWVGVMEISCISICRPGDTTWTELRFQDNYRYVKNMVRADG 183
I KA S + + + V+ VI+ +++ CR GD WT+L + V ++V +G
Sbjct: 140 IKKAVSSTSLLDDEWVVLVIYNTDRKLA---FCRRGDKQWTDL--ESVASSVDDIVFCNG 194
Query: 184 FLYCSFFSLD---AIVAFNVASQNWEILPYPPSILFMY----KYLTE--YDGSLLILAKV 234
FF++D I +++ N + P + F Y KYL E YD ++L K+
Sbjct: 195 V----FFAIDRLGEIYHCELSANNPKATPLCSTSPFRYDSCKKYLAESDYDELWVVLKKL 250
Query: 235 -VNS-----SGYRVFTLNRSQMDWFEIECLDDRALFMG--ASCLWWVPVEKG 278
+N + + ++ NR +W ++ L +ALF+ C+ + E+G
Sbjct: 251 ELNDDCDFETSFEIYEFNRETNEWTKVMSLRGKALFLSPQGRCIAVLAGERG 302
>sp|Q9SUG4|FB241_ARATH Putative F-box protein At4g22170 OS=Arabidopsis thaliana
GN=At4g22170 PE=4 SV=2
Length = 363
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 9 KQKLERRSRSDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQY--RDKFTWLMGY-- 64
++K S SDLP ++NL+ RL R R+VC W S Q +++ WL+ +
Sbjct: 2 ERKHNPNSWSDLPHDLLNLVFERLSFANFNRARSVCSSWYSASRQSVPKNQIHWLILFPE 61
Query: 65 -----NSHSCYLYDPCHKQRF 80
N+ SC L++P K +
Sbjct: 62 DNNNKNNSSCTLFNPDEKDKL 82
>sp|Q3EBY8|FB111_ARATH F-box protein At2g17690 OS=Arabidopsis thaliana GN=At2g17690 PE=2
SV=1
Length = 421
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 18 SDLPLTIINLIVSRLYVVYQ-IRFRAVCKRWRS 49
S LP ++ LI RLY V + IRFR++CK WRS
Sbjct: 5 SKLPEELLGLIALRLYSVIELIRFRSICKSWRS 37
>sp|Q9C6X9|FB315_ARATH Probable F-box protein At1g44080 OS=Arabidopsis thaliana
GN=At1g44080 PE=4 SV=1
Length = 347
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 59/307 (19%)
Query: 18 SDLPLTIINLIVSRLYV-VYQIRFRAVCKRWRSVDIQ--------------YRDKFTWLM 62
SDL +I+L+ + L + +RFR++CK WRS ++ K T +
Sbjct: 7 SDLHEDLIDLLANNLSSNINLLRFRSICKPWRSTVATKKRLHNHFERNLPTFKKKKTVVS 66
Query: 63 GYNSHSCYLYDPCHKQRFTVF---ISDKNRTTLLGARPLDSKNGWVLFEGEK--NIINLP 117
L PC + + + +S+ ++ LL PL +G + +K +++ +
Sbjct: 67 PSTFFRVTLPSPCRNKGWLIKNRQVSESSKNNLLS--PL---SGKTITPSDKTLDLLKVE 121
Query: 118 VWREFSIAKA-TFSATPVSPDCVIFVIWVGVMEISCISICRPGDTT--WTELRFQDNYRY 174
+R+ SI + S V D V FV+ EI C C+ G+ T WT + ++ +
Sbjct: 122 CFRDSSILQLFADSDRVVFLDNVFFVVDFK-NEIWC---CKSGEETRHWTRINNEEAKGF 177
Query: 175 VKNMVRADGFLYCSFFSLDAIVAFN-VASQNWEILPYPPSILFMY--------KYLTEYD 225
+ +++ G +Y +LD A ++ I Y PS + K L EY
Sbjct: 178 L-DIILHKGKIY----ALDLTGAIWWISLSELSIYQYGPSTPVDFYEIDNCKEKRLVEYC 232
Query: 226 GSLLILAK-----------VVNSSGYRVFTLNRSQMDWFEIECLDDRALFMGASCLWWVP 274
G L ++ + + ++V+ ++++ ++W E+ L D+AL + + V
Sbjct: 233 GELCVVHRFYKKFCVKRVLTERTVCFKVYKMDKNLVEWVEVSSLGDKALIVATDNCFLVL 292
Query: 275 VEK--GC 279
+ GC
Sbjct: 293 ASEYYGC 299
>sp|Q9SHX9|FB72_ARATH Putative F-box protein At1g65770 OS=Arabidopsis thaliana
GN=At1g65770 PE=4 SV=1
Length = 360
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 18 SDLPLTIINLIVSRLYVVYQI-RFRAVCKRWRS 49
S LP+ ++N+I RL+ ++ RFR++C+ WRS
Sbjct: 5 STLPVDLLNMIAGRLFSNIELKRFRSICRSWRS 37
>sp|Q9FKZ7|FB301_ARATH Putative F-box protein At5g66830 OS=Arabidopsis thaliana
GN=At5g66830 PE=4 SV=1
Length = 394
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV--DIQYRDKFTWLMGY--NSHSCYLYD 73
S LP ++ + RL R ++VC W SV + Q ++ W++ + +++ C L++
Sbjct: 21 SKLPSDLMQFVFDRLGFADFQRAKSVCSSWLSVSRNSQPNNQIPWMIRFPKDNNHCLLFN 80
Query: 74 PCHKQRFTVFISDKNRTTLLGARPLDSKNGWVLFEGE----------------------K 111
P + + ++ + + + S W+L + E +
Sbjct: 81 PEEEDK--MYKTPNLGNDFAKSSCIASYGSWLLMQPESEYMEEDLDHQCNNLYILDLLTR 138
Query: 112 NIINLPVWR-EFSIAKATFSATPVSPDCVIFVIWVGVMEISCISICRPGDTTWTELRFQD 170
INLP+ + EF + S D ++ +G+ + GD++W ++
Sbjct: 139 ERINLPILQPEFGLTCPILWTDEKSKDHLV----IGMAHEELAISFKKGDSSWKQIPTLS 194
Query: 171 NYRYVKNMVRADGFLYC 187
+MV D LYC
Sbjct: 195 GIEECFSMVFKDHKLYC 211
>sp|Q9LMR4|FBK4_ARATH Putative F-box/kelch-repeat protein At1g15680 OS=Arabidopsis
thaliana GN=At1g15680 PE=4 SV=1
Length = 410
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 RSRSDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV 50
+ R +LP ++ IV+RL + RF++VCK WRS+
Sbjct: 14 KRRIELPEELLAEIVARLPFISITRFKSVCKGWRSL 49
>sp|O49647|FB246_ARATH Putative F-box protein At4g22660 OS=Arabidopsis thaliana
GN=At4g22660 PE=4 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQY--RDKFTWLMGY--------NSH 67
SDLPL ++NL+ RL + ++VC W S Q +++ WLM + NS
Sbjct: 11 SDLPLDLLNLVFKRLSFANFRQAKSVCSSWYSASKQSVPKNQIPWLMLFPKDKNNNKNSS 70
Query: 68 SCYLYDPCHKQRF 80
++P K +
Sbjct: 71 CTIFFNPEDKDQL 83
>sp|P0C2F5|Y1657_ARATH Uncharacterized protein At1g65760 OS=Arabidopsis thaliana
GN=At1g65760 PE=2 SV=1
Length = 362
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 18 SDLPLTIINLIVSRLYVVYQI-RFRAVCKRWRS 49
S+LP ++++IV L+ V ++ RFR++C+ WRS
Sbjct: 7 SNLPEELLHMIVLLLFSVVELKRFRSICRSWRS 39
>sp|Q39090|UFO_ARATH Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1
SV=2
Length = 442
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 177 NMVRADGFLYCSFFSLDAIVAFNVASQNWEILPYPPSILFMYKYLTEYDGSLLILAKVVN 236
MV G YC +S +++++ V W + P L E G L+++A V
Sbjct: 257 KMVYVQGKFYCMNYSPFSVLSYEVTGNRWIKIQAPMRRFLRSPSLLESKGRLILVAAVEK 316
Query: 237 S-----SGYRVFTLNRSQMDWFEIE 256
S R+++L + W EIE
Sbjct: 317 SKLNVPKSLRLWSLQQDNATWVEIE 341
>sp|Q9FZK1|FBX6_ARATH F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1
Length = 467
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 122/317 (38%), Gaps = 51/317 (16%)
Query: 5 IKEKKQKLERRSRSDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV--DIQYRDKFTWL- 61
+ E +++ + P + +VSRL + +FRAVC++W ++ + FT L
Sbjct: 105 VDEISGNMDQEIWQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELP 164
Query: 62 ---------MGYNSHSCYLYDPCHKQRFTVFISDKNRTTLLGARPLDSKNGWVLFE--GE 110
N +S +YDP K+ I + +++ P+ S G V F G
Sbjct: 165 QTIPWFYTITHENVNSGQVYDPSLKKWHHPIIPALPKKSIV--LPMASAGGLVCFLDIGH 222
Query: 111 KNI-INLPVWREF-----------SIAKATFSATPVSPDCVIFVIWVGV---MEI--SCI 153
+N ++ P+ + F S + S V+WVG E+ S
Sbjct: 223 RNFYVSNPLTKSFRELPARSFKVWSRVAVGMTLNGNSTSHGYKVLWVGCEGEYEVYDSLS 282
Query: 154 SICRPGDTTWTELRFQDNYRYVKNMVRADGFLYCSFFSLDAIVAFNVASQNWE--ILPYP 211
++ T + ++ + V LY + I+++++ S W+ I+P P
Sbjct: 283 NVWTKRGTIPSNIKLPVLLNFKSQPVAIHSTLYFMLTDPEGILSYDMVSGKWKQFIIPGP 342
Query: 212 PSILFMYKYLTEYDGSLLILAKVVNSSGYR---VFTLNRSQMDWFEIE------CLDDRA 262
P + + G L+L ++ + ++ L + + W E++ CL+
Sbjct: 343 PD---LSDHTLAACGERLMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYG 399
Query: 263 LFMGASCLWWVPVEKGC 279
+ +CL KGC
Sbjct: 400 KHIRMNCLG----NKGC 412
>sp|Q9LS04|FB187_ARATH Putative F-box protein At3g25750 OS=Arabidopsis thaliana
GN=At3g25750 PE=4 SV=2
Length = 362
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 157 RPGDTTWTELRFQDNYRYVKNMVRADGFLYCSFFSLDAIVAFNVASQNWEILPYPPSILF 216
R G +WT+++ Q +++ G +Y L + + SQ + + L
Sbjct: 178 REGSRSWTKIKNQ--VEDFSDIILHMGRIYA--VDLKGAIWWISLSQLTIVQQTSSTPLD 233
Query: 217 MYKY-------LTEYDGSLLILAK-------VVNSSGYRVFTLNRSQMDWFEIECLDDRA 262
YKY L EY G L I+ + + + G++V+ ++ W E+ CL D
Sbjct: 234 YYKYDSCQDTRLVEYCGDLCIVHELSITRNHIQRTVGFKVYKMDEDLAKWVEVSCLGDNT 293
Query: 263 LFMGA-SCLWWVPVE-KGC 279
L + SC V E GC
Sbjct: 294 LIVACNSCFTVVASEYHGC 312
>sp|Q9FK54|FB260_ARATH F-box protein At5g18160 OS=Arabidopsis thaliana GN=At5g18160 PE=2
SV=1
Length = 379
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 24/115 (20%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVD-----IQYRDKFTWLMGYNSHSCYLY 72
+ +PL I I+SRL +R R+V K W S+ I++R K T S C L
Sbjct: 32 NSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKT------SPPCVLL 85
Query: 73 DPCHKQRFTVFISDKNRTTLLGA-------------RPLDSKNGWVLFEGEKNII 114
+ VF S +++ T R LDS +G + EG K ++
Sbjct: 86 IFRKHDKLIVFSSPQHQNTYSHVQDYHIEIPKNGFIRRLDSVHGLICLEGSKQLV 140
>sp|Q9LUI9|FB325_ARATH Probable F-box protein At3g22720 OS=Arabidopsis thaliana
GN=At3g22720 PE=4 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV 50
SDLPL ++ I+SR+ R R+ C+RW ++
Sbjct: 3 SDLPLDLVEKILSRVPATSLKRLRSTCRRWNAL 35
>sp|Q1PEN2|FB174_ARATH F-box protein At3g22350 OS=Arabidopsis thaliana GN=At3g22350 PE=2
SV=1
Length = 241
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV 50
SDLPL ++ I+SR+ R R+ CK+W ++
Sbjct: 2 SDLPLDLVEEILSRVSATSLKRLRSTCKQWNTL 34
>sp|Q9LVG8|FB295_ARATH Putative F-box protein At5g60060 OS=Arabidopsis thaliana
GN=At5g60060 PE=4 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 240 YRVFTLNRSQMDWFEIECLDDRALFMGASCLWWVPVEKG 278
+RV+ L R + W E+ L D ALF+G C + V G
Sbjct: 288 FRVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQNPAG 326
>sp|Q9M1A7|FBK75_ARATH F-box/kelch-repeat protein At3g59610 OS=Arabidopsis thaliana
GN=At3g59610 PE=2 SV=1
Length = 521
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 19 DLPLTIINLIVSRLYVVYQIRFRAVCKRWRSV 50
DLP + I+S L + RFR VCKRW ++
Sbjct: 7 DLPYDLEGEILSHLPIQILARFRCVCKRWNTL 38
>sp|O49624|FB242_ARATH Putative F-box protein At4g22180 OS=Arabidopsis thaliana
GN=At4g22180 PE=4 SV=3
Length = 402
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 18 SDLPLTIINLIVSRLYVVYQIRFRAVCKRWRSVDIQYRD-KFTWLMGY----NSHSCYLY 72
S+LPL ++ + RL R ++VC W S Q + WL+ + N++SC L+
Sbjct: 22 SELPLDLLTAVFERLSYANFQRAKSVCSSWHSGSRQSVPIQIPWLILFPEYDNNNSCTLF 81
Query: 73 DPCHK 77
+P K
Sbjct: 82 NPEEK 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,931,654
Number of Sequences: 539616
Number of extensions: 5255505
Number of successful extensions: 12086
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12056
Number of HSP's gapped (non-prelim): 36
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)