BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038768
(386 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 164/297 (55%), Gaps = 30/297 (10%)
Query: 76 KRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE--FINE 131
KR++ +++ +++FSNK LG+GGFG VYKG+L DG LVAVK LK + G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
V +S H N++ GFC +R L+Y +M NGS+ + + S L+W +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP--PLDWPKRQR 143
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
IA+G ARGL YLH C+ +I+H D+K NILL E+F + DFGLAKL + K+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-A 202
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEV-KVSLSSEIYFPNSI 310
RGTIG+IAPE + G S K+DV+ YG+M+LE++ G++ ++ +++ ++ + +
Sbjct: 203 VRGTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 311 --------------------YKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGS 347
YK E Q+A + T+ KM V+ MLEG
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 9/221 (4%)
Query: 76 KRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE--FINE 131
KR++ +++ +++F NK LG+GGFG VYKG+L DG LVAVK LK + G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
V +S H N++ GFC +R L+Y +M NGS+ + + S L+W +
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ--PPLDWPKRQR 135
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
IA+G ARGL YLH C+ +I+H D+K NILL E+F + DFGLAKL + K+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-A 194
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRK 292
RG IG+IAPE + G S K+DV+ YG+M+LE++ G++
Sbjct: 195 VRGXIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 149/277 (53%), Gaps = 17/277 (6%)
Query: 53 RKKNTENENAEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKLPDG 110
+ N+ N+ ++++ V R D++ TN+F +K +G G FG VYKG L DG
Sbjct: 7 KATNSINDALSSSYL---VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 111 RLVAVKVLKNSKVNGEEFINEVAS-MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLD 169
VA+K G E +S H ++VS +GFC E+ + LIY++M NG+L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 170 QFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP 229
+ +Y + ++ + W +I +G ARGL YLH I+H D+K NILL E+F P
Sbjct: 124 RHLYGSDLPTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178
Query: 230 KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
KI+DFG++K + + +GT+GYI PE F + G ++ KSDVYS+G+++ E++
Sbjct: 179 KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLC 236
Query: 290 GRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAGVV 326
R + + SL E+ N +E N QL +V
Sbjct: 237 AR--SAIVQSLPREMV--NLAEWAVESHNNGQLEQIV 269
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 23/226 (10%)
Query: 78 YNYSDVKRMTNSFS--------NKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE-- 127
+++ ++K +TN+F NK+G+GGFG VYKG + + + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 128 --FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKL 184
F E+ M+K H N+V LGF + L+Y +MPNGSL D S + L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTPPL 130
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE 244
W C+IA G A G+ +LH +I H DIK NILL E F KISDFGLA+ SEK
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 245 SFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ GT Y+APE G ++ KSD+YS+G+++LE++ G
Sbjct: 188 QTVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 23/226 (10%)
Query: 78 YNYSDVKRMTNSFS--------NKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE-- 127
+++ ++K +TN+F NK+G+GGFG VYKG + + + K+ + EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 128 --FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKL 184
F E+ M+K H N+V LGF + L+Y +MPNGSL D S + L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTPPL 124
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE 244
W C+IA G A G+ +LH +I H DIK NILL E F KISDFGLA+ SEK
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 245 SFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ GT Y+APE G ++ KSD+YS+G+++LE++ G
Sbjct: 182 QXVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 19/278 (6%)
Query: 53 RKKNTENENAEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKLPDG 110
+ N+ N+ ++++ V R D++ TN+F +K +G G FG VYKG L DG
Sbjct: 7 KATNSINDALSSSYL---VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 111 RLVAVKVLKNSKVNGEEFINEVAS-MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLD 169
VA+K G E +S H ++VS +GFC E+ + LIY++M NG+L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 170 QFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP 229
+ +Y + ++ + W +I +G ARGL YLH I+H D+K NILL E+F P
Sbjct: 124 RHLYGSDLPTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178
Query: 230 KISDFGLAKL-SEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
KI+DFG++K +E ++ + + +GT+GYI PE F + G ++ KSDVYS+G+++ E++
Sbjct: 179 KITDFGISKKGTELGQTHLXXV-VKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVL 235
Query: 289 VGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAGVV 326
R + + SL E+ N +E N QL +V
Sbjct: 236 CAR--SAIVQSLPREMV--NLAEWAVESHNNGQLEQIV 269
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 23/226 (10%)
Query: 78 YNYSDVKRMTNSFS--------NKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE-- 127
+++ ++K +TN+F NK+G+GGFG VYKG + + + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 128 --FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKL 184
F E+ M+K H N+V LGF + L+Y +MPNGSL D S + L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTPPL 130
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE 244
W C+IA G A G+ +LH +I H DIK NILL E F KISDFGLA+ SEK
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 245 SFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ GT Y+APE G ++ KSD+YS+G+++LE++ G
Sbjct: 188 QTVMXSRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 23/226 (10%)
Query: 78 YNYSDVKRMTNSFS--------NKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE-- 127
+++ ++K +TN+F NK G+GGFG VYKG + + + K+ + EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 128 --FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKL 184
F E+ +K H N+V LGF + L+Y + PNGSL D S + L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----LDRLSCLDGTPPL 121
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE 244
W C+IA G A G+ +LH +I H DIK NILL E F KISDFGLA+ SEK
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 245 SFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ GT Y APE G ++ KSD+YS+G+++LE++ G
Sbjct: 179 QXVXXSRIVGTTAYXAPEAL---RGEITPKSDIYSFGVVLLEIITG 221
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFI---NEVASMS 136
Y +++ S ++G G FG+VYKGK VAVK+LK E+F NEVA +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
KT HVN++ F+G+ K A++ ++ SL + ++ +E+ K + + IA
Sbjct: 88 KTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQT 141
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
A+G++YLH I+H D+K +NI L E KI DFGLA + + + G++
Sbjct: 142 AQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 257 GYIAPEVF-CRNFGGVSHKSDVYSYGMMILEMVVG 290
++APEV ++ S +SDVYSYG+++ E++ G
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKT 138
D+ + K+G G FG+V++ + G VAVK+L + E EF+ EVA M +
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 139 SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H N+V F+G + +++ E++ GSL + ++ S +L+ R +A +A+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAK 148
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
G+ YLH N IVH ++K N+L+ + + K+ DFGL++L K +F+S A GT +
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEW 205
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+APEV R+ + KSDVYS+G+++ E+
Sbjct: 206 MAPEVL-RDEPS-NEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKT 138
D+ + K+G G FG+V++ + G VAVK+L + E EF+ EVA M +
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 139 SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H N+V F+G + +++ E++ GSL + ++ S +L+ R +A +A+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAK 148
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
G+ YLH N IVH D+K N+L+ + + K+ DFGL++L K F+ A GT +
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEW 205
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+APEV R+ + KSDVYS+G+++ E+
Sbjct: 206 MAPEVL-RDEPS-NEKSDVYSFGVILWELAT 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 71 VSLAPKRYNYS--DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEE 127
S+ P NY +++R + +KLG G +G VY+G L VAVK LK + EE
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 128 FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR 187
F+ E A M + H N+V LG C + +I EFM G+L ++ + +N +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV--- 117
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +A I+ +EYL + +H D+ N L+GE+ K++DFGL++L +++
Sbjct: 118 -LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 71 VSLAPKRYNYS--DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEE 127
S+ P NY +++R + +KLG G +G VY+G L VAVK LK + EE
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 128 FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR 187
F+ E A M + H N+V LG C + +I EFM G+L ++ + +N +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV--- 117
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +A I+ +EYL + +H D+ N L+GE+ K++DFGL++L +++
Sbjct: 118 -LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 173 AHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 15 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + + IA ARG++YLH
Sbjct: 73 FMGYS-TKPQLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHA 126
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 127 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 22/236 (9%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K ++ ++ E+FI E M K SH +V G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKL-EWRTMCQIAVGIARGLEYLHRGC 207
C E+ L++EFM +G L ++ R L T+ + + + G+ YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--S 175
Query: 268 FGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
F S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 231
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 22/236 (9%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K ++ ++ E+FI E M K SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKL-EWRTMCQIAVGIARGLEYLHRGC 207
C E+ L++EFM +G L ++ R L T+ + + + G+ YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--S 177
Query: 268 FGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
F S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 233
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K ++ ++ E+FI E M K SH +V G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C E+ L++EFM +G L ++ + T+ + + + G+ YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEAC- 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +F
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 181
Query: 269 GGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 236
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 72 SLAPKRYNYS--DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEF 128
++ P NY +++R + +KLG G +G VY+G L VAVK LK + EEF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRT 188
+ E A M + H N+V LG C + +I EFM G+L ++ + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A I+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ +
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTA 173
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 174 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 121
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPI 177
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 178 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 133
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 134 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 189
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 190 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 178
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 179 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 178
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 179 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K +K ++ ++FI E M K SH +V G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C E+ L++EFM +G L ++ + T+ + + + G+ YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC- 143
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +F
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 198
Query: 269 GGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 253
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + ++ R + +LG G FG V+ G + VAVK LK ++ + F+ E
Sbjct: 2 PWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANL 61
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M H +V ++ +I E+M GSL F+ +E K+ + +
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGG----KVLLPKLIDFSA 117
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ Y+ R +H D++ N+L+ E KI+DFGLA++ E E + + GA+
Sbjct: 118 QIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKF 173
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFP 307
I + APE NFG + KSDV+S+G+++ E+V GR NA+V +LS P
Sbjct: 174 PIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 124
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 125 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 180
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 181 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 122
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPI 178
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 179 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + + IA ARG++YLH
Sbjct: 85 FMGYS-TKPQLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHA 138
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + G+I ++APEV
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 20/235 (8%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K ++ ++ E+FI E M K SH +V G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C E+ L+ EFM +G L ++ + T+ + + + G+ YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEAC- 124
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +F
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 179
Query: 269 GGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLG G FG V+ G + VAVK LK ++ + F+ E M H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V +++ +I EFM GSL F+ +E K+ + + IA G+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGG----KVLLPKLIDFSAQIAEGMA 123
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R +H D++ N+L+ E KI+DFGLA++ E E + + GA+ I + AP
Sbjct: 124 YIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 179
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFP 307
E NFG + KS+V+S+G+++ E+V GR NA+V +LS P
Sbjct: 180 EAI--NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 13/221 (5%)
Query: 72 SLAPKRYNYS--DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEF 128
++ P NY +++R + +KLG G +G VY+G L VAVK LK + EEF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRT 188
+ E A M + H N+V LG C + +I EFM G+L ++ + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---- 117
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A I+ +EYL + +H D+ N L+GE+ K++DFGL++L ++ +
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTA 173
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 174 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ +I E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 294
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELTT 376
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 72 SLAPKRYNYS--DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEF 128
++ P NY +++R + +KLG G +G VY+G L VAVK LK + EEF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRT 188
+ E A M + H N+V LG C + +I EFM G+L ++ + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---- 117
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A I+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ +
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTA 173
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 174 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 294
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELTT 376
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + +N + + +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV----LLYMATQI 121
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L ++ + GA+ I
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPI 177
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 178 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 65 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 119
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 120 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 175
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 176 EAAL--YGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 63 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 117
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 118 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 173
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 174 EAAL--YGRFTIKSDVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 323 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 377
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 378 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 433
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 434 EAAL--YGRFTIKSDVWSFGILLTELTT 459
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + ++ + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + ++ + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + ++ + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMS 136
Y+ +++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ H N+V LG C + +I EFM G+L ++ + ++ + + +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQI 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
+ +EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ APE N S KSDV+++G+++ E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 67 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 121
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 122 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 177
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 178 EAAL--YGRFTIKSDVWSFGILLTELTT 203
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ + A++ ++ SL ++ E+ K E + + IA ARG++YLH
Sbjct: 85 FMGYS-TAPQLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHA 138
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + G+I ++APEV
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 294
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELTT 376
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 11/209 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMSKTSH 140
+++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V LG C + +I EFM G+L ++ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
EYL + +H D+ N L+GE+ K++DFGL++L ++F + GA+ I + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTA 178
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
PE N S KSDV+++G+++ E+
Sbjct: 179 PESLAYN--KFSIKSDVWAFGVLLWEIAT 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 22/228 (9%)
Query: 74 APKR-----------YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNS 121
APKR Y+ +++R + +KLG G +G VY+G L VAVK LK
Sbjct: 194 APKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 253
Query: 122 KVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN 181
+ EEF+ E A M + H N+V LG C + +I EFM G+L ++ + +N
Sbjct: 254 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 313
Query: 182 RKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE 241
+ + +A I+ +EYL + +H ++ N L+GE+ K++DFGL++L
Sbjct: 314 AVV----LLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM- 365
Query: 242 KKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+++ + GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 366 TGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 411
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ +I E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D+ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 38 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 96 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 149
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + +A IA G+
Sbjct: 64 KLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMA 118
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + GA+ I + AP
Sbjct: 119 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 174
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 175 EAAL--YGRFTIKSDVWSFGILLTELTT 200
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 22/228 (9%)
Query: 74 APKR-----------YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNS 121
APKR Y+ +++R + +KLG G +G VY+G L VAVK LK
Sbjct: 236 APKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 295
Query: 122 KVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN 181
+ EEF+ E A M + H N+V LG C + +I EFM G+L ++ + +N
Sbjct: 296 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 355
Query: 182 RKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE 241
+ + +A I+ +EYL + +H ++ N L+GE+ K++DFGL++L
Sbjct: 356 AVV----LLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM- 407
Query: 242 KKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+++ + GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 408 TGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 453
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 97 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 150
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + + L + +A IA G+
Sbjct: 241 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 295
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGL +L E E + + GA+ I + AP
Sbjct: 296 YVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAP 351
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 352 EAAL--YGRFTIKSDVWSFGILLTELTT 377
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 71 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 124
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 74 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 127
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 22/236 (9%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F ++G G FG V+ G + VA+K ++ ++ E+FI E M K SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKL-EWRTMCQIAVGIARGLEYLHRGC 207
C E+ L++EFM +G L ++ R L T+ + + + G+ YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEA- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++H D+ N L+GE+ K+SDFG+ + + + S G + + + +PEVF +
Sbjct: 123 --SVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--S 177
Query: 268 FGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSS--EIYFPNSIYKHI 314
F S KSDV+S+G+++ E+ R N+EV +S+ +Y P H+
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 233
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M G L F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 74 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 127
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 69 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 122
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M G L F+ E + + L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGE----MGKYLRLPQLVDMAAQIASGMA 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTELTT 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 20/204 (9%)
Query: 94 LGQGGFGSVYKG-KLPDGRLV----AVKVLKNS---KVNGEEFINEVASMSKTSHVNVVS 145
LG G FG+VYKG +P+G V A+K+L + K N EF++E M+ H ++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMASMDHPHLVR 81
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
LG C + L+ + MP+G L ++++ E NI +L + V IA+G+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQL----LLNWCVQIAKGMMYLEE 135
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
R+VH D+ N+L+ KI+DFGLA+L E E + G + I ++A E C
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--C 190
Query: 266 RNFGGVSHKSDVYSYGMMILEMVV 289
++ +H+SDV+SYG+ I E++
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + ++ IA G+
Sbjct: 71 KLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGE----TGKYLRLPQLVDMSAQIASGMA 125
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 181
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 182 EAAL--YGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + KLGQG FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ E + L + ++ IA G+
Sbjct: 71 KLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGE----TGKYLRLPQLVDMSAQIASGMA 125
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + VH D++ NIL+GE+ K++DFGLA+L E E + + GA+ I + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAP 181
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+
Sbjct: 182 EAAL--YGRFTIKSDVWSFGILLTELTT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 11/209 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMSKTSH 140
+++R + +KLG G FG VY+G L VAVK LK + EEF+ E A M + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V LG C + +I EFM G+L ++ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
EYL + +H D+ N L+GE+ K++DFGL++L ++ + GA+ I + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
PE N S KSDV+++G+++ E+
Sbjct: 179 PESLAYN--KFSIKSDVWAFGVLLWEIAT 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 11/209 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMSKTSH 140
+++R + +KLG G +G VY G L VAVK LK + EEF+ E A M + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V LG C + ++ E+MP G+L ++ + + + + +A I+ +
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV----LLYMATQISSAM 143
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
EYL + +H D+ N L+GE+ K++DFGL++L +++ + GA+ I + A
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 199
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
PE N S KSDV+++G+++ E+
Sbjct: 200 PESLAYN--TFSIKSDVWAFGVLLWEIAT 226
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 89 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 142
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + G+I ++APEV
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 20/203 (9%)
Query: 94 LGQGGFGSVYKG-KLPDGRLV----AVKVLKNS---KVNGEEFINEVASMSKTSHVNVVS 145
LG G FG+VYKG +P+G V A+K+L + K N EF++E M+ H ++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMASMDHPHLVR 104
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
LG C + L+ + MP+G L ++++ E NI +L + V IA+G+ YL
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQL----LLNWCVQIAKGMMYLEE 158
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
R+VH D+ N+L+ KI+DFGLA+L E E + G + I ++A E C
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--C 213
Query: 266 RNFGGVSHKSDVYSYGMMILEMV 288
++ +H+SDV+SYG+ I E++
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELM 236
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 22/228 (9%)
Query: 74 APKR-----------YNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNS 121
APKR Y+ +++R + +KLG G +G VY+G L VAVK LK
Sbjct: 197 APKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 256
Query: 122 KVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN 181
+ EEF+ E A M + H N+V LG C + +I EFM G+L ++ + ++
Sbjct: 257 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 316
Query: 182 RKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE 241
+ + +A I+ +EYL + +H ++ N L+GE+ K++DFGL++L
Sbjct: 317 AVV----LLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM- 368
Query: 242 KKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+++ + GA+ I + APE N S KSDV+++G+++ E+
Sbjct: 369 TGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIAT 414
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 97 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 150
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + G+I ++APEV
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++ R + +LG G FG V+ G VA+K LK ++ E F+ E M K H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V E+ ++ E+M GSL F+ D E R L+ + +A +A G+
Sbjct: 65 KLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMA 119
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
Y+ R + +H D++ NIL+G KI+DFGLA+L E E + GA+ I + AP
Sbjct: 120 YIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAP 175
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV 289
E +G + KSDV+S+G+++ E+V
Sbjct: 176 EAAL--YGRFTIKSDVWSFGILLTELVT 201
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ K + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 69 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 122
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + G+I ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 11/209 (5%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEEFINEVASMSKTSH 140
+++R + +KLG G +G VY+G L VAVK LK + EEF+ E A M + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V LG C + +I EFM G+L ++ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV----LLYMATQISSAM 122
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
EYL + +H D+ N L+GE+ K++DFGL++L ++ + GA+ I + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
PE N S KSDV+++G+++ E+
Sbjct: 179 PESLAYN--KFSIKSDVWAFGVLLWEIAT 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
+ ++G G FG+VYKGK VAVK+L + ++ F NEV + KT HVN++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F+G+ + A++ ++ SL ++ E+ K E + IA A+G++YLH
Sbjct: 69 FMGYS-TAPQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHA 122
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+K +NI L ED KI DFGLA + + G+I ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
++ S +SDVY++G+++ E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 124/236 (52%), Gaps = 20/236 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
++KR + +LG G FG V GK VAVK++K ++ +EF E +M K SH
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V F G C ++ ++ E++ NG L ++ + + LE + ++ + G+
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-----RSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
+L + + +H D+ N L+ D C K+SDFG+ + + ++S +G + + + AP
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAP 174
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMV-VGR------KNAEV--KVSLSSEIYFPN 308
EVF ++ S KSDV+++G+++ E+ +G+ N+EV KVS +Y P+
Sbjct: 175 EVF--HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH 228
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 64
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 65 ANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 119
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + + G
Sbjct: 120 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREG 175
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEI 304
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV +L
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG- 232
Query: 305 YFPNSIYKHIEPGN 318
Y+ + P N
Sbjct: 233 ------YRMVRPDN 240
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 4 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 63
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 64 ANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 118
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + + G
Sbjct: 119 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREG 174
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 175 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 9 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 68
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 69 ANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 123
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + + G
Sbjct: 124 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREG 179
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 180 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + +V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M + H +V ++ +I E+M NGSL F+ + S I KL + +A
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAA 116
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + + GA+
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKF 172
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFP 307
I + APE N+G + KSDV+S+G+++ E+V G N EV +L
Sbjct: 173 PIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---- 226
Query: 308 NSIYKHIEPGN 318
Y+ + P N
Sbjct: 227 ---YRMVRPDN 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
+V R T +LG G FG V+ G VAVK LK ++ + F+ E M + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V ++ +I E+M NGSL F+ + S I KL + +A IA G+
Sbjct: 64 RLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAAQIAEGMA 118
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
++ +H D++ NIL+ + KI+DFGLA+L E E + + GA+ I + AP
Sbjct: 119 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 174
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFPNSIYKHI 314
E N+G + KSDV+S+G+++ E+V G N EV +L Y+ +
Sbjct: 175 EAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-------YRMV 225
Query: 315 EPGN 318
P N
Sbjct: 226 RPDN 229
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 18/233 (7%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + ++ R + KLG G FG V+ VAVK +K ++ E F+ E
Sbjct: 4 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 63
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M H +V L K+ +I EFM GSL F+ +E S K + +
Sbjct: 64 MKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS----KQPLPKLIDFSA 118
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ + +H D++ NIL+ KI+DFGLA++ E E + + GA+
Sbjct: 119 QIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKF 174
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSL 300
I + APE NFG + KSDV+S+G++++E+V G N EV +L
Sbjct: 175 PIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 64
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 119
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + G
Sbjct: 120 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREG 175
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 28/254 (11%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 1 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 60
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 115
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + G
Sbjct: 116 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREG 171
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEI 304
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV +L
Sbjct: 172 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG- 228
Query: 305 YFPNSIYKHIEPGN 318
Y+ + P N
Sbjct: 229 ------YRMVRPDN 236
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 7 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 66
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 121
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + G
Sbjct: 122 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREG 177
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 178 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 18/233 (7%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + ++ R + KLG G FG V+ VAVK +K ++ E F+ E
Sbjct: 177 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 236
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M H +V L K+ +I EFM GSL F+ +E S K + +
Sbjct: 237 MKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS----KQPLPKLIDFSA 291
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ + +H D++ NIL+ KI+DFGLA++ E E + + GA+
Sbjct: 292 QIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKF 347
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSL 300
I + APE NFG + KSDV+S+G++++E+V G N EV +L
Sbjct: 348 PIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 75 PKRYNYSD---VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE 131
P++ + D V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 8 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 67
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
M + H +V ++ +I E+M NGSL F+ + S I KL +
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLD 122
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+A IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + G
Sbjct: 123 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREG 178
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
A+ I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 179 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + +V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 3 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANL 62
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M + H +V ++ +I E+M NGSL F+ + S I KL + +A
Sbjct: 63 MKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAA 117
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + GA+
Sbjct: 118 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKF 173
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFP 307
I + APE N+G + KSDV+S+G+++ E+V G N EV +L
Sbjct: 174 PIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---- 227
Query: 308 NSIYKHIEPGN 318
Y+ + P N
Sbjct: 228 ---YRMVRPDN 235
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + +V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M + H +V ++ +I E+M NGSL F+ + S I KL + +A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAA 116
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + GA+
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKF 172
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFP 307
I + APE N+G + KSDV+S+G+++ E+V G N EV +L
Sbjct: 173 PIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---- 226
Query: 308 NSIYKHIEPGN 318
Y+ + P N
Sbjct: 227 ---YRMVRPDN 234
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + +V R T +LG G FG V+ G VAVK LK ++ + F+ E
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M + H +V ++ +I E+M NGSL F+ + S I KL + +A
Sbjct: 62 MKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAA 116
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + GA+
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKF 172
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 173 PIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
+V R T +LG G FG V+ G VAVK LK ++ + F+ E M + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V ++ +I E+M NGSL F+ + S I KL + +A IA G+
Sbjct: 65 RLVRLYAVV-TQEPIYIITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAAQIAEGMA 119
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
++ +H +++ NIL+ + KI+DFGLA+L E E + + GA+ I + AP
Sbjct: 120 FIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 175
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSLSSEIYFPNSIYKHI 314
E N+G + KSDV+S+G+++ E+V G N EV +L Y+ +
Sbjct: 176 EAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-------YRMV 226
Query: 315 EPGN 318
P N
Sbjct: 227 RPDN 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 94 LGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G KLP R VA+K LK+ + +F++E + M + H NV+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + +I EFM NGSLD F+ + +L + GIA G++YL
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYL---A 152
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES---FISMLGARGTIGYIAPEVF 264
++ VH D+ NIL+ + K+SDFGL++ E S + S LG + I + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+ + SDV+SYG+++ E++
Sbjct: 213 --QYRKFTSASDVWSYGIVMWEVM 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 18/229 (7%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + +V R T +LG G G V+ G VAVK LK ++ + F+ E
Sbjct: 2 PWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M + H +V ++ +I E+M NGSL F+ + S I KL + +A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFL--KTPSGI--KLTINKLLDMAA 116
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ +H D++ NIL+ + KI+DFGLA+L E E + GA+
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKF 172
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
I + APE N+G + KSDV+S+G+++ E+V G N EV
Sbjct: 173 PIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 90 FSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGE--------EFINEVASMSKTSH 140
+ ++G+GGFG V+KG+L D +VA+K L GE EF EV MS +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V G + + ++ EF+P G L + D+ ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGI 135
Query: 201 EYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
EY+ N IVH D++ NI L C K++DFGL++ +S S+ G G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGN 189
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++APE + K+D YS+ M++ ++ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 30/268 (11%)
Query: 94 LGQGGFGSVYKGKLPDGR-----LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSF 146
+G G FG VYKG L VA+K LK + +F+ E M + SH N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
G + K +I E+M NG+LD+F+ +++ + + + GIA G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYL--- 163
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFC 265
N+ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 266 -RNFGGVSHKSDVYSYGMMILE-MVVGRK------NAEVKVSLSSEIYFPNSIYKHIEPG 317
R F + SDV+S+G+++ E M G + N EV +++ P + P
Sbjct: 224 YRKF---TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC---PS 277
Query: 318 NEFQLAGVVTEEEKEMAKKMILVLEMLE 345
+QL ++E+ K ++ +L+
Sbjct: 278 AIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS 134
P + ++ R + KLG G FG V+ VAVK +K ++ E F+ E
Sbjct: 171 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV 230
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
M H +V L K+ +I EFM GSL F+ +E S K + +
Sbjct: 231 MKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS----KQPLPKLIDFSA 285
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
IA G+ ++ + +H D++ NIL+ KI+DFGLA+ +GA+
Sbjct: 286 QIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKF 331
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEVKVSL 300
I + APE NFG + KSDV+S+G++++E+V G N EV +L
Sbjct: 332 PIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 27/215 (12%)
Query: 90 FSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGE--------EFINEVASMSKTSH 140
+ ++G+GGFG V+KG+L D +VA+K L GE EF EV MS +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V G + + ++ EF+P G L + D+ ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGI 135
Query: 201 EYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
EY+ N IVH D++ NI L C K++DFG ++ +S S+ G G
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGN 189
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++APE + K+D YS+ M++ ++ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 90 FSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGE--------EFINEVASMSKTSH 140
+ ++G+GGFG V+KG+L D +VA+K L GE EF EV MS +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
N+V G + + ++ EF+P G L + D+ ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGI 135
Query: 201 EYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
EY+ + N IVH D++ NI L C K++DF L++ +S S+ G G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGN 189
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++APE + K+D YS+ M++ ++ G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 90 FSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG--EEFINEVASMSKTSHVNVVSF 146
++G+G FG V+ G+L D LVAVK + + +F+ E + + SH N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+G C +K+ ++ E + G F+ E + +L +T+ Q+ A G+EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK 232
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT-IGYIAPEVFC 265
C I H D+ N L+ E KISDFG+++ E + + G R + + APE
Sbjct: 233 CCI---HRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEAL- 287
Query: 266 RNFGGVSHKSDVYSYGMMILE 286
N+G S +SDV+S+G+++ E
Sbjct: 288 -NYGRYSSESDVWSFGILLWE 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 94 LGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G KLP R VA+K LK+ + +F++E + M + H NV+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + +I EFM NGSLD F+ + +L + GIA G++YL
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYL---A 126
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES---FISMLGARGTIGYIAPEVF 264
++ VH + NIL+ + K+SDFGL++ E S + S LG + I + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+ + SDV+SYG+++ E++
Sbjct: 187 --QYRKFTSASDVWSYGIVMWEVM 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 17/202 (8%)
Query: 90 FSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG--EEFINEVASMSKTSHVNVVSF 146
++G+G FG V+ G+L D LVAVK + + +F+ E + + SH N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+G C +K+ ++ E + G F+ E + +L +T+ Q+ A G+EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK 232
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA--RGTIGYIAPEVF 264
C I H D+ N L+ E KISDFG+++ E+ + + G + + + APE
Sbjct: 233 CCI---HRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 265 CRNFGGVSHKSDVYSYGMMILE 286
N+G S +SDV+S+G+++ E
Sbjct: 288 --NYGRYSSESDVWSFGILLWE 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 34/231 (14%)
Query: 79 NYSDVKRMTNSFSNKL-----------GQGGFGSVYKG--KLPDGRLVAVKVLKNSKVNG 125
Y D R + F+ +L G G FG V G KLP R VAV + K KV
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAI-KTLKVGY 83
Query: 126 EE-----FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESS 178
E F+ E + M + H NVV G K ++ EFM NG+LD F+ +D + +
Sbjct: 84 TEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFT 143
Query: 179 NINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK 238
I + + GIA G+ YL ++ VH D+ NIL+ + K+SDFGL++
Sbjct: 144 VIQ-------LVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
Query: 239 LSE-KKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+ E E+ + G + + + APE + + SDV+SYG+++ E++
Sbjct: 194 VIEDDPEAVYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +PDG VA+KVL+ S +E ++E M+ V
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
LG C + L+ + MP G L D N R L + + + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCL----LDHVRENRGR-LGSQDLLNWCMQIAKGMSYLE-- 136
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE-VFC 265
++R+VH D+ N+L+ KI+DFGLA+L + E+ G + I ++A E +
Sbjct: 137 -DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 266 RNFGGVSHKSDVYSYGMMILEMV 288
R F +H+SDV+SYG+ + E++
Sbjct: 196 RRF---THQSDVWSYGVTVWELM 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 111/220 (50%), Gaps = 11/220 (5%)
Query: 68 RNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE 127
+N S A Y ++ +F +LG G FG V GK VA+K++K ++ +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 128 FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR 187
FI E M SH +V G C +++ +I E+M NG L ++ + + + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-----MRHRFQTQ 120
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ ++ + +EYL + + +H D+ N L+ + K+SDFGL++ E +
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
S +G++ + + PEV + S KSD++++G+++ E+
Sbjct: 177 SSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVLKN-SKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG VYK K + G L A KV++ S+ E++I E+ ++ H +V LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
Y K ++ EF P G++D + + ++R L T QI V + LE L+ + R
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLE-----LDRGL---TEPQIQVVCRQMLEALNFLHSKR 137
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLA----KLSEKKESFISMLGARGTIGYIAPE-VFC 265
I+H D+K N+L+ + +++DFG++ K +K++SFI GT ++APE V C
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 191
Query: 266 RNFGGVS--HKSDVYSYGMMILEM 287
+K+D++S G+ ++EM
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F +LG G FG V GK VA+K++K ++ +EFI E M SH +V G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C +++ +I E+M NG L ++ + + + + + ++ + +EYL +
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLE---S 122
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+ N L+ + K+SDFGL++ E + S +G++ + + PEV +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 179
Query: 269 GGVSHKSDVYSYGMMILEM 287
S KSD++++G+++ E+
Sbjct: 180 SKFSSKSDIWAFGVLMWEI 198
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 29/226 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL---VAVKVLKN--SKVNGEEFINEVA 133
+++D+K F + +G+G FG V K ++ L A+K +K SK + +F E+
Sbjct: 13 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 67
Query: 134 SMSKTSH-VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE----------SSNINR 182
+ K H N+++ LG C + L E+ P+G+L F+ +++
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 183 KLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEK 242
L + + A +ARG++YL + + +H D+ NIL+GE++ KI+DFG LS
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG---LSRG 181
Query: 243 KESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+E ++ R + ++A E N+ + SDV+SYG+++ E+V
Sbjct: 182 QEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGLA+ L + E+ + G + I +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 29/226 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL---VAVKVLKN--SKVNGEEFINEVA 133
+++D+K F + +G+G FG V K ++ L A+K +K SK + +F E+
Sbjct: 23 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 134 SMSKTSH-VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE----------SSNINR 182
+ K H N+++ LG C + L E+ P+G+L F+ +++
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 183 KLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEK 242
L + + A +ARG++YL + + +H D+ NIL+GE++ KI+DFG LS
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG---LSRG 191
Query: 243 KESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+E ++ R + ++A E N+ + SDV+SYG+++ E+V
Sbjct: 192 QEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F +LG G FG V GK VA+K++K ++ +EFI E M SH +V G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C +++ +I E+M NG L ++ + + + + + ++ + +EYL +
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLE---S 118
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+ N L+ + K+SDFGL++ E + S +G++ + + PEV +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 175
Query: 269 GGVSHKSDVYSYGMMILEM 287
S KSD++++G+++ E+
Sbjct: 176 SKFSSKSDIWAFGVLMWEI 194
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 67 IRNYVSLAPKRYNYSDVKRMTNSFSNKL-----------GQGGFGSVYKG--KLPDGR-- 111
+R YV + Y D + + F+ +L G G FG V G KLP +
Sbjct: 17 LRTYVD----PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 72
Query: 112 LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLD 169
VA+K LK + +F+ E + M + H N++ G + K ++ E+M NGSLD
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 170 QFI--YDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDF 227
F+ +D + + I + + GIA G++YL ++ VH D+ NIL+ +
Sbjct: 133 SFLRKHDAQFTVIQ-------LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNL 182
Query: 228 CPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFC-RNFGGVSHKSDVYSYGMMIL 285
K+SDFGL++ L + E+ + G + I + +PE R F + SDV+SYG+++
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLW 239
Query: 286 EMV 288
E++
Sbjct: 240 EVM 242
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 67 IRNYVSLAPKRYNYSDVKRMTNSFSNKL-----------GQGGFGSVYKG--KLPDGR-- 111
+R YV + Y D + + F+ +L G G FG V G KLP +
Sbjct: 19 LRTYVD----PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 112 LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLD 169
VA+K LK + +F+ E + M + H N++ G + K ++ E+M NGSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 170 QFI--YDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDF 227
F+ +D + + I + + GIA G++YL ++ VH D+ NIL+ +
Sbjct: 135 SFLRKHDAQFTVIQ-------LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNL 184
Query: 228 CPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFC-RNFGGVSHKSDVYSYGMMIL 285
K+SDFGL++ L + E+ + G + I + +PE R F + SDV+SYG+++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLW 241
Query: 286 EMV 288
E++
Sbjct: 242 EVM 244
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F +LG G FG V GK VA+K++K ++ +EFI E M SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C +++ +I E+M NG L ++ + + + + + ++ + +EYL +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+ N L+ + K+SDFGL++ E + S +G++ + + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 180
Query: 269 GGVSHKSDVYSYGMMILEM 287
S KSD++++G+++ E+
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 144
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 145 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVV 289
+H+SDV+SYG+ + E++
Sbjct: 202 LHRI--YTHQSDVWSYGVTVWELMT 224
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVLKN-SKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG VYK K + G L A KV++ S+ E++I E+ ++ H +V LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
Y K ++ EF P G++D + + ++R L T QI V + LE L+ + R
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLE-----LDRGL---TEPQIQVVCRQMLEALNFLHSKR 129
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLA----KLSEKKESFISMLGARGTIGYIAPE-VFC 265
I+H D+K N+L+ + +++DFG++ K +K++SFI GT ++APE V C
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 183
Query: 266 RNFGGVS--HKSDVYSYGMMILEM 287
+K+D++S G+ ++EM
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHV 141
D K +T F +LG G FG V GK VA+K++K ++ +EFI E M SH
Sbjct: 13 DPKDLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 70
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
+V G C +++ +I E+M NG L ++ + + + + + ++ + +E
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAME 125
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
YL + + +H D+ N L+ + K+SDFGL++ E + S +G++ + + P
Sbjct: 126 YLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPP 181
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEM 287
EV + S KSD++++G+++ E+
Sbjct: 182 EVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVV 289
+H+SDV+SYG+ + E++
Sbjct: 195 LHRI--YTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 136 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 193 LHRI--YTHQSDVWSYGVTVWELM 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 194 LHRI--YTHQSDVWSYGVTVWELM 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 159
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 160 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVV 289
+H+SDV+SYG+ + E++
Sbjct: 217 LHRI--YTHQSDVWSYGVTVWELMT 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 139 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 196 LHRI--YTHQSDVWSYGVTVWELM 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 140
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 141 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 198 LHRI--YTHQSDVWSYGVTVWELM 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 195 LHRI--YTHQSDVWSYGVTVWELM 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 94 LGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G KLP R VA+K LK + +F+ E + M + H N++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + K ++ E+M NGSLD F+ + +L + GI+ G++YL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-----VGMLRGISAGMKYLS--- 141
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA- 200
Query: 267 NFGGVSHKSDVYSYGMMILEMV 288
F + SDV+SYG+++ E+V
Sbjct: 201 -FRKFTSASDVWSYGIVMWEVV 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 136 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 193 LHRI--YTHQSDVWSYGVTVWELM 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 194 LHRI--YTHQSDVWSYGVTVWELM 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 195 LHRI--YTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 199 LHRI--YTHQSDVWSYGVTVWELM 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 195 LHRI--YTHQSDVWSYGVTVWELM 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 161 KYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 129 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 186 LHRI--YTHQSDVWSYGVTVWELM 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 131
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 132 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 189 SPEAIAYRKF---TSASDVWSYGIVLWEVM 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 68 RNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE 127
+N S A Y ++ +F +LG G FG V GK VA+K++K ++ +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 128 FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR 187
FI E M SH +V G C +++ +I E+M NG L ++ + + + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-----MRHRFQTQ 120
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ ++ + +EYL + + +H D+ N L+ + K+SDFGL++ E
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-T 176
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
S +G++ + + PEV + S KSD++++G+++ E+
Sbjct: 177 SSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 148
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 149 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 206 SPEAIAYRKF---TSASDVWSYGIVLWEVM 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 78 YNYSDVKRMTNSFSNKL-----------GQGGFGSVYKG--KLPDGR--LVAVKVLKNSK 122
+ Y D + + F+ +L G G FG V G KLP + VA+K LK
Sbjct: 26 HTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 123 VNGE--EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESS 178
+ +F+ E + M + H N++ G + K ++ E+M NGSLD F+ +D + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 179 NINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK 238
I + + GIA G++YL ++ VH D+ NIL+ + K+SDFGL++
Sbjct: 146 VIQ-------LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 239 -LSEKKESFISMLGARGTIGYIAPEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
L + E+ + G + I + +PE R F + SDV+SYG+++ E++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVL------KNSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G V + V S +E ++E M+ + +V
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 168
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 169 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 226 LHRI--YTHQSDVWSYGVTVWELM 247
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKN--SKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G FG V +G+L P + VA+K LK ++ EF++E + M + H N++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIY--DEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
G ++ EFM NG+LD F+ D + + I + + GIA G+ YL
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LVGMLRGIASGMRYL-- 132
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES---FISMLGARGTIGYIAPE 262
+ VH D+ NIL+ + K+SDFGL++ E+ S + S LG + I + APE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMV 288
F + SD +SYG+++ E++
Sbjct: 192 AIA--FRKFTSASDAWSYGIVMWEVM 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+F +LG G FG V GK VA+K++K ++ +EFI E M SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C +++ +I E+M NG L ++ + + + + + ++ + +EYL +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+ N L+ + K+SDFGL++ E + S G++ + + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLM--Y 180
Query: 269 GGVSHKSDVYSYGMMILEM 287
S KSD++++G+++ E+
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E+M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL + L + E+ + G + I +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINE--VASMSKTSHVNVVSFLG--- 148
+G+G +G+VYKG L D R VAVKV S N + FINE + + H N+ F+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 149 --FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH-- 204
+ + L+ E+ PNGSL +++ S +W + C++A + RGL YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------DWVSSCRLAHSVTRGLAYLHTE 130
Query: 205 --RGCNIR--IVHFDIKPHNILLGEDFCPKISDFGLA------KLSEKKESFISMLGARG 254
RG + + I H D+ N+L+ D ISDFGL+ +L E + + G
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 255 TIGYIAPEVF-----CRNFGGVSHKSDVYSYGMMILEM 287
TI Y+APEV R+ + D+Y+ G++ E+
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 67 IRNYVSLAPKRYNYSDVKRMTNSFSNKL-----------GQGGFGSVYKG--KLPDGR-- 111
+R YV + Y D + + F+ +L G G FG V G KLP +
Sbjct: 19 LRTYVD----PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 112 LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLD 169
VA+K LK + +F+ E + M + H N++ G + K ++ E M NGSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 170 QFI--YDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDF 227
F+ +D + + I + + GIA G++YL ++ VH D+ NIL+ +
Sbjct: 135 SFLRKHDAQFTVIQ-------LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNL 184
Query: 228 CPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFC-RNFGGVSHKSDVYSYGMMIL 285
K+SDFGL++ L + E+ + G + I + +PE R F + SDV+SYG+++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF---TSASDVWSYGIVLW 241
Query: 286 EMV 288
E++
Sbjct: 242 EVM 244
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAEGMNYLE 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 132 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 189 LHRI--YTHQSDVWSYGVTVWELM 210
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 29/226 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRL---VAVKVLKN--SKVNGEEFINEVA 133
+++D+K F + +G+G FG V K ++ L A+K +K SK + +F E+
Sbjct: 20 DWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 74
Query: 134 SMSKTSH-VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE----------SSNINR 182
+ K H N+++ LG C + L E+ P+G+L F+ +++
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 183 KLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEK 242
L + + A +ARG++YL + + +H ++ NIL+GE++ KI+DFG LS
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFG---LSRG 188
Query: 243 KESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+E ++ R + ++A E N+ + SDV+SYG+++ E+V
Sbjct: 189 QEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 27/207 (13%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G+L P R VA+K LK + + +F++E + M + H N++
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR-TMCQIA---VGIARGLEYL 203
G + K +I E+M NGSLD F+ RK + R T+ Q+ GI G++YL
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFL---------RKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
++ VH D+ NIL+ + K+SDFG+++ L + E+ + G + I + APE
Sbjct: 148 S---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 263 VFC-RNFGGVSHKSDVYSYGMMILEMV 288
R F + SDV+SYG+++ E++
Sbjct: 205 AIAYRKF---TSASDVWSYGIVMWEVM 228
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 27/207 (13%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G+L P R VA+K LK + + +F++E + M + H N++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR-TMCQIA---VGIARGLEYL 203
G + K +I E+M NGSLD F+ RK + R T+ Q+ GI G++YL
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL---------RKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
++ VH D+ NIL+ + K+SDFG+++ L + E+ + G + I + APE
Sbjct: 133 S---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 263 VFC-RNFGGVSHKSDVYSYGMMILEMV 288
R F + SDV+SYG+++ E++
Sbjct: 190 AIAYRKF---TSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 27/207 (13%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G FG V G+L P R VA+K LK + + +F++E + M + H N++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWR-TMCQIA---VGIARGLEYL 203
G + K +I E+M NGSLD F+ RK + R T+ Q+ GI G++YL
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL---------RKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
++ VH D+ NIL+ + K+SDFG+++ L + E+ + G + I + APE
Sbjct: 127 S---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 263 VFC-RNFGGVSHKSDVYSYGMMILEMV 288
R F + SDV+SYG+++ E++
Sbjct: 184 AIAYRKF---TSASDVWSYGIVMWEVM 207
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E M NGSLD F+ +D + + I + + GIA G+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 160
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 161 KYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 218 SPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 89 SFSNKLGQGGFGSVYKG--KLPDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVN 142
S +G G FG V G KLP + VA+K LK + +F+ E + M + H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 143 VVSFLGFCYEKKKRALIYEFMPNGSLDQFI--YDEESSNINRKLEWRTMCQIAVGIARGL 200
++ G + K ++ E M NGSLD F+ +D + + I + + GIA G+
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ-------LVGMLRGIASGM 131
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYI 259
+YL ++ VH D+ NIL+ + K+SDFGL++ L + E+ + G + I +
Sbjct: 132 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 260 APEVFC-RNFGGVSHKSDVYSYGMMILEMV 288
+PE R F + SDV+SYG+++ E++
Sbjct: 189 SPEAIAYRKF---TSASDVWSYGIVLWEVM 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
L G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
L G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 199 LHRI--YTHQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVV 289
+H+SDV+SYG+ + E++
Sbjct: 194 LHRI--YTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
L G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFGLAKL +E G + I ++A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 199 LHRI--YTHQSDVWSYGVTVWELM 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 194 LHRI--YTHQSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVV 289
+H+SDV+SYG+ + E++
Sbjct: 194 LHRI--YTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 192 LHRI--YTHQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 199 LHRI--YTHQSDVWSYGVTVWELM 220
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGR----LVAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+VYKG +P+G VA+K L+ S +E ++E M+ + +V
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK--LEWRTMCQIAVGIARGLEYLH 204
LG C + LI + MP G L ++ E NI + L W V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ R+VH D+ N+L+ KI+DFG AKL +E G + I ++A E
Sbjct: 139 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+H+SDV+SYG+ + E++
Sbjct: 196 LHRI--YTHQSDVWSYGVTVWELM 217
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKN--SKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G FG V +G+L P + VA+K LK ++ EF++E + M + H N++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIY--DEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
G ++ EFM NG+LD F+ D + + I + + GIA G+ YL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LVGMLRGIASGMRYL-- 134
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESF---ISMLGARGTIGYIAPE 262
+ VH D+ NIL+ + K+SDFGL++ E+ S S LG + I + APE
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMV 288
F + SD +SYG+++ E++
Sbjct: 194 AIA--FRKFTSASDAWSYGIVMWEVM 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE----------SSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ E S N +L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 94 LGQGGFGSVYKGKLP--DGRL--VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSF 146
LG+G FGSV +G L DG VAVK +K +S+ EEF++E A M SH NV+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 147 LGFCYEK-----KKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
LG C E K +I FM G L ++ + + +T+ + V IA G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
YL N +H D+ N +L +D ++DFGL+K + + A+ + +IA
Sbjct: 162 YLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEM 287
E + KSDV+++G+ + E+
Sbjct: 219 ESLADRV--YTSKSDVWAFGVTMWEI 242
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKNSKVNG-EEFINEVASM 135
+KR +LG+G FG V+ + D LVAVK LK++ N ++F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE-------ESSNINRKLEWRT 188
+ H ++V F G C E +++E+M +G L++F+ N +L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M IA IA G+ YL + VH D+ N L+GE+ KI DFG+++ + +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVS 299
I ++ PE + R F + +SDV+S G+++ E+ K ++S
Sbjct: 187 GGHTMLPIRWMPPESIMYRKF---TTESDVWSLGVVLWEIFTYGKQPWYQLS 235
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ +I+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE F I + A
Sbjct: 129 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 25 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI EF+P GSL +++ + +++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-----RIDHIKLLQYTSQICKGME 131
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 30 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 27 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I E+ G+L +++ E S +INR ++ ++
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 205 LESLQTQKF---TTKSDVWSFGVLLWELM 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 206 LESLQTQKF---TTKSDVWSFGVLLWELM 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 205 LESLQTQKF---TTKSDVWSFGVLLWELM 230
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 146
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 204 LESLQTQKF---TTKSDVWSFGVLLWELM 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 206 LESLQTQKF---TTKSDVWSFGVLLWELM 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 140
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 198 LESLQTQKF---TTKSDVWSFGVLLWELM 223
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 145
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 203 LESLQTQKF---TTKSDVWSFGVLLWELM 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 166
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 224 LESLQTQKF---TTKSDVWSFGVLLWELM 249
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 167
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 225 LESLQTQKF---TTKSDVWSFGVLLWELM 250
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G++Y
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 143
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 201 LESLQTQKF---TTKSDVWSFGVLLWELM 226
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 198 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNG-----EEFINEVASMSKTSHVNVVSFLG 148
+G GGFG VY+ G VAVK ++ E E + H N+++ G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
C ++ L+ EF G L++ + +++ + AV IARG+ YLH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLS-------GKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 209 IRIVHFDIKPHNILLGEDF--------CPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+ I+H D+K NIL+ + KI+DFGLA+ + + + A G ++A
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGAYAWMA 182
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PEV + S SDV+SYG+++ E++ G
Sbjct: 183 PEVIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 201 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 149
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ L ++ +S + GA+ + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 207 LESLQTQKF---TTKSDVWSFGVLLWELM 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 202 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I + G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 40/214 (18%)
Query: 94 LGQGGFGSVY---KGKLPD-GRLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSF 146
LGQG FG V+ K PD G L A+KVLK + + + + E ++ +H VV
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK- 94
Query: 147 LGFCYEKK-KRALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
L + ++ + K LI +F+ G L + ++ EE + ++A+G L
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-------LAELALG----L 143
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLS---EKKE-SFISMLGARGTI 256
++LH ++ I++ D+KP NILL E+ K++DFGL+K + EKK SF GT+
Sbjct: 144 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GTV 194
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y+APEV R G SH +D +SYG+++ EM+ G
Sbjct: 195 EYMAPEVVNRQ--GHSHSADWWSYGVLMFEMLTG 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 250 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 90 FSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSH 140
F +LG+ FG VYKG L + VA+K LK+ K G EEF +E ++ H
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQH 88
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----------DEESSNINRKLEWRTMC 190
NVV LG + + ++I+ + +G L +F+ ++ + LE
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 191 QIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISML 250
+ IA G+EYL + +VH D+ N+L+ + KISD GL + + + +
Sbjct: 149 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 251 GARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
+ I ++APE +G S SD++SYG+++ E+
Sbjct: 206 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 194 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 127
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 128 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 185 PESLTESKFSVA--SDVWSFGVVLYEL 209
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 90 FSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSH 140
F +LG+ FG VYKG L + VA+K LK+ K G EEF +E ++ H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQH 71
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----------DEESSNINRKLEWRTMC 190
NVV LG + + ++I+ + +G L +F+ ++ + LE
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 191 QIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISML 250
+ IA G+EYL + +VH D+ N+L+ + KISD GL + + + +
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 251 GARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
+ I ++APE +G S SD++SYG+++ E+
Sbjct: 189 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 148
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 206 LESLQTQKF---TTKSDVWSFGVLLWELM 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 149
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 207 LESLQTQKF---TTKSDVWSFGVLLWELM 232
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 73 LAPK-RYNYSDVKRMTNSFSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNG 125
L P+ +N + + F +LG+G FGSV + L D G +VAVK L++S + +
Sbjct: 14 LVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 126 EEFINEVASMSKTSHVNVVSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRK 183
+F E+ + H N+V + G CY +R LI E++P GSL ++ + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----R 128
Query: 184 LEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEK 242
++ + Q I +G+EYL R +H D+ NIL+ + KI DFGL K L +
Sbjct: 129 IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 185
Query: 243 KESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
KE I + APE + V+ SDV+S+G+++ E+
Sbjct: 186 KEXXKVKEPGESPIFWYAPESLTESKFSVA--SDVWSFGVVLYEL 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 73 LAPK-RYNYSDVKRMTNSFSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNG 125
L P+ +N + + F +LG+G FGSV + L D G +VAVK L++S + +
Sbjct: 14 LVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 126 EEFINEVASMSKTSHVNVVSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRK 183
+F E+ + H N+V + G CY +R LI E++P GSL ++ + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----R 128
Query: 184 LEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEK 242
++ + Q I +G+EYL R +H D+ NIL+ + KI DFGL K L +
Sbjct: 129 IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 185
Query: 243 KESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
KE I + APE + V+ SDV+S+G+++ E+
Sbjct: 186 KEXXKVKEPGESPIFWYAPESLTESKFSVA--SDVWSFGVVLYEL 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 126
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 127 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 184 PESLTESKFSVA--SDVWSFGVVLYEL 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 131
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 134
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 135 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 192 PESLTESKFSVA--SDVWSFGVVLYEL 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 132
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 133 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 190 PESLTESKFSVA--SDVWSFGVVLYEL 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 129 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 133
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 134 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 191 PESLTESKFSVA--SDVWSFGVVLYEL 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 148
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 206 LESLQTQKF---TTKSDVWSFGVLLWELM 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 89 SFSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKT 138
+ LG+G FG V K K + VAVK+LK+ + + ++E+ M
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 139 S-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD------EESSNINR----KLEWR 187
H N+++ LG C + +I + G+L +++ E S +INR ++ ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 188 TMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI 247
+ +ARG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 248 SMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 146
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 204 LESLQTQKF---TTKSDVWSFGVLLWELM 229
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 159
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 217 PESLTESKFSVA--SDVWSFGVVLYEL 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 135
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 136 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 193 PESLTESKFSVA--SDVWSFGVVLYEL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 153
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 211 LESLQTQKF---TTKSDVWSFGVLLWELM 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 28/212 (13%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSH-VNVVSFLGFCY 151
+G G +G VYKG+ + G+L A+KV+ + EE E+ + K SH N+ ++ G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ EF GS+ I + + + + K EW + I I RGL +LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL--KEEW--IAYICREILRGLSHLHQ 147
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGL-AKLSE---KKESFISMLGARGTIGYIAP 261
+++H DIK N+LL E+ K+ DFG+ A+L ++ +FI GT ++AP
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAP 198
Query: 262 EVF-CRNFGGVSH--KSDVYSYGMMILEMVVG 290
EV C ++ KSD++S G+ +EM G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 27/221 (12%)
Query: 92 NKLGQGGFGSVYKGKLPDGRL---VAVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
+KLG GG +VY + D L VA+K + EE F EV + S+ SH N+V
Sbjct: 17 DKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
S + E L+ E++ +L ++I ES L T I G+++ H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG---PLSVDTAINFTNQILDGIKHAH 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
++RIVH DIKP NIL+ + KI DFG+AK LSE S GT+ Y +PE
Sbjct: 129 ---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET--SLTQTNHVLGTVQYFSPE- 182
Query: 264 FCRNFGGVSHK-SDVYSYGMMILEMVVGRK--NAEVKVSLS 301
+ G + + +D+YS G+++ EM+VG N E VS++
Sbjct: 183 --QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 90 FSNKLGQGGFGSVYKGKLPD--GRLV--AVKVLKNSKVNGE--EFINEVASMSKTSHVNV 143
F+ +G+G FG VY G L D G+ + AVK L GE +F+ E M SH NV
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 144 VSFLGFCYEKKKRALI-YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+S LG C + L+ +M +G L FI +E + + L + +A+G+++
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 207
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKE--SFISMLGARGTIGYIA 260
L + + VH D+ N +L E F K++DFGLA+ KE S + GA+ + ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 261 PEVF-CRNFGGVSHKSDVYSYGMMILEMV 288
E + F + KSDV+S+G+++ E++
Sbjct: 265 LESLQTQKF---TTKSDVWSFGVLLWELM 290
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 90 FSNKLGQGGFGSVY--------KGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTS 139
LG+G FG V K K VAVK+LK+ + + I+E+ M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 140 -HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE----------ESSNINRKLEWRT 188
H N+++ LG C + +I E+ G+L +++ S N +L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A +ARG+EYL + + +H D+ N+L+ ED KI+DFGLA+ +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ + +++ + Q I +G+E
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGME 129
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H ++ NIL+ + KI DFGL K L + KE + I + A
Sbjct: 130 YL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 187 PESLTESKFSVA--SDVWSFGVVLYEL 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNS-KVNGEEFINEVASMSKTSHVNV 143
F +LG+G FGSV + L D G +VAVK L++S + + +F E+ + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 144 VSFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G CY +R LI E++P GSL ++ +++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-----RIDHIKLLQYTSQICKGME 131
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
YL R +H D+ NIL+ + KI DFGL K L + KE I + A
Sbjct: 132 YLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE + V+ SDV+S+G+++ E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKK 154
+G FG V+K +L + VAVK+ + EV S+ H N++ F+G EK+
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG--AEKR 89
Query: 155 KRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR--- 205
+ LI F GSL F+ +N+ + W +C IA +ARGL YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL----KANV---VSWNELCHIAETMARGLAYLHEDIP 142
Query: 206 ----GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
G I H DIK N+LL + I+DFGLA E +S G GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 262 EVF--CRNFGGVSH-KSDVYSYGMMILEMV 288
EV NF + + D+Y+ G+++ E+
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 25/255 (9%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+ +
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 145
Query: 177 SSNIN----RKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKI 231
++++ R LE R + + +A+G+ +L + C +H D+ N+LL KI
Sbjct: 146 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 201
Query: 232 SDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMILEMVVG 290
DFGLA+ ++I AR + ++APE F V + +SDV+SYG+++ E+
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWEIFSL 258
Query: 291 RKNAEVKVSLSSEIY 305
N + ++S+ Y
Sbjct: 259 GLNPYPGILVNSKFY 273
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 25/255 (9%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 18 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 77
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+ +
Sbjct: 78 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 137
Query: 177 SSNIN----RKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKI 231
++++ R LE R + + +A+G+ +L + C +H D+ N+LL KI
Sbjct: 138 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 193
Query: 232 SDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMILEMVVG 290
DFGLA+ ++I AR + ++APE F V + +SDV+SYG+++ E+
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWEIFSL 250
Query: 291 RKNAEVKVSLSSEIY 305
N + ++S+ Y
Sbjct: 251 GLNPYPGILVNSKFY 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 70 YVSLAPKRYNYSDV--------KRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVA 114
Y S+ P+ ++ +DV R + S +LGQG FG VY+G P+ R VA
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VA 81
Query: 115 VKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFI 172
+K + + E EF+NE + M + + +VV LG + + +I E M G L ++
Sbjct: 82 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Query: 173 Y----DEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFC 228
+ E++ + M Q+A IA G+ YL+ + VH D+ N ++ EDF
Sbjct: 142 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 198
Query: 229 PKISDFGLAKLSEKKESFISMLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++ E
Sbjct: 199 VKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWE 254
Query: 287 M 287
+
Sbjct: 255 I 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLK-NSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
K+GQG G+VY + G+ VA++ + + E INE+ M + + N+V++L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ E++ GSL + + ++ + + + LE+LH +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK NILLG D K++DFG A+++ ++ +M+ GT ++APEV R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAY 193
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G K D++S G+M +EM+ G
Sbjct: 194 G--PKVDIWSLGIMAIEMIEG 212
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 69 NYVSLAPKRYNYSDVK---RMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLK 119
NY S A K + SD+K R + LG G FG VY+G++ P VAVK L
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 120 N--SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES 177
S+ + +F+ E +SK +H N+V +G + R ++ E M G L F+ +
Sbjct: 71 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 178 -SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------K 230
+ L + +A IA G +YL +H DI N LL CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 231 ISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-- 288
I DFG+A+ + + A + ++ PE F G + K+D +S+G+++ E+
Sbjct: 185 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 242
Query: 289 -----VGRKNAEVK--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVL 341
+ N EV V+ + P + PG +++ + + E ++L
Sbjct: 243 GYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIIL 297
Query: 342 EMLEGSTEDLQI 353
E +E T+D +
Sbjct: 298 ERIEYCTQDPDV 309
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKN--SKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G G V G+L P R VA+K LK ++ +F++E + M + H N++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + ++ E+M NGSLD F+ + +L + G+ G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYL---S 168
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
++ VH D+ N+L+ + K+SDFGL++ L + ++ + G + I + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA- 227
Query: 267 NFGGVSHKSDVYSYGMMILEMVV 289
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVLA 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 64
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXX 179
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 180 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 218
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 94 LGQGGFGSVYKGKL--PDGR--LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFL 147
+G G G V G+L P R VA+K LK + +F++E + M + H N++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + ++ E+M NGSLD F+ + +L + G+ G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYL---S 168
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
++ VH D+ N+L+ + K+SDFGL++ L + ++ + G + I + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA- 227
Query: 267 NFGGVSHKSDVYSYGMMILEMVV 289
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVLA 249
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 69 NYVSLAPKRYNYSDVK---RMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLK 119
NY S A K + SD+K R + LG G FG VY+G++ P VAVK L
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 120 N--SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES 177
S+ + +F+ E +SK +H N+V +G + R ++ E M G L F+ +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 178 -SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------K 230
+ L + +A IA G +YL +H DI N LL CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 231 ISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-- 288
I DFG+A+ + + A + ++ PE F G + K+D +S+G+++ E+
Sbjct: 185 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 242
Query: 289 -----VGRKNAEVK--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVL 341
+ N EV V+ + P + PG +++ + + E ++L
Sbjct: 243 GYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIIL 297
Query: 342 EMLEGSTEDLQI 353
E +E T+D +
Sbjct: 298 ERIEYCTQDPDV 309
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 69 NYVSLAPKRYNYSDVK---RMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLK 119
NY S A K + SD+K R + LG G FG VY+G++ P VAVK L
Sbjct: 38 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 96
Query: 120 N--SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES 177
S+ + +F+ E +SK +H N+V +G + R ++ E M G L F+ +
Sbjct: 97 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 156
Query: 178 -SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------K 230
+ L + +A IA G +YL +H DI N LL CP K
Sbjct: 157 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 210
Query: 231 ISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-- 288
I DFG+A+ + + A + ++ PE F G + K+D +S+G+++ E+
Sbjct: 211 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 268
Query: 289 -----VGRKNAEVK--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVL 341
+ N EV V+ + P + PG +++ + + E ++L
Sbjct: 269 GYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIIL 323
Query: 342 EMLEGSTEDLQI 353
E +E T+D +
Sbjct: 324 ERIEYCTQDPDV 335
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 69 NYVSLAPKRYNYSDVK---RMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLK 119
NY S A K + SD+K R + LG G FG VY+G++ P VAVK L
Sbjct: 18 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 120 N--SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES 177
S+ + +F+ E +SK +H N+V +G + R ++ E M G L F+ +
Sbjct: 77 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 136
Query: 178 -SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------K 230
+ L + +A IA G +YL +H DI N LL CP K
Sbjct: 137 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 190
Query: 231 ISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-- 288
I DFG+A+ + + A + ++ PE F G + K+D +S+G+++ E+
Sbjct: 191 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 248
Query: 289 -----VGRKNAEVK--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVL 341
+ N EV V+ + P + PG +++ + + E ++L
Sbjct: 249 GYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIIL 303
Query: 342 EMLEGSTEDLQI 353
E +E T+D +
Sbjct: 304 ERIEYCTQDPDV 315
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 24/235 (10%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKNSKVNG-EEFINEVASM 135
+KR +LG+G FG V+ + D LVAVK LK+ + ++F E +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQF----------IYDEESSNINRKLE 185
+ H ++V F G C + +++E+M +G L++F + D + +L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES 245
M IA IA G+ YL + VH D+ N L+G + KI DFG+++ +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 246 FISMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVS 299
+ I ++ PE + R F + +SDV+S+G+++ E+ K ++S
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSFGVILWEIFTYGKQPWFQLS 240
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXX 188
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 189 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 69 NYVSLAPKRYNYSDVK---RMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLK 119
NY S A K + SD+K R + LG G FG VY+G++ P VAVK L
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 120 N--SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES 177
S+ + +F+ E +SK +H N+V +G + R ++ E M G L F+ +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 178 -SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------K 230
+ L + +A IA G +YL +H DI N LL CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 231 ISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-- 288
I DFG+A+ + + A + ++ PE F G + K+D +S+G+++ E+
Sbjct: 185 IGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSL 242
Query: 289 -----VGRKNAEVK--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVL 341
+ N EV V+ + P + PG +++ + + E ++L
Sbjct: 243 GYMPYPSKSNQEVLEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIIL 297
Query: 342 EMLEGSTEDLQI 353
E +E T+D +
Sbjct: 298 ERIEYCTQDPDV 309
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLK-NSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
K+GQG G+VY + G+ VA++ + + E INE+ M + + N+V++L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ E++ GSL + + ++ + + + LE+LH +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK NILLG D K++DFG A+++ ++ M+ GT ++APEV R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMAPEVVTRKAY 193
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G K D++S G+M +EM+ G
Sbjct: 194 G--PKVDIWSLGIMAIEMIEG 212
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 211
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 270 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLK-NSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
K+GQG G+VY + G+ VA++ + + E INE+ M + + N+V++L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ E++ GSL + + ++ + + + LE+LH +
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK NILLG D K++DFG A+++ ++ M+ GT ++APEV R
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAY 194
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G K D++S G+M +EM+ G
Sbjct: 195 G--PKVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLK-NSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
K+GQG G+VY + G+ VA++ + + E INE+ M + + N+V++L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ E++ GSL + + ++ + + + LE+LH +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK NILLG D K++DFG A+++ ++ M+ GT ++APEV R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAY 193
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G K D++S G+M +EM+ G
Sbjct: 194 G--PKVDIWSLGIMAIEMIEG 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 94 LGQGGFGSVYK-GKLPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
LG+G FG K G ++ +K +++ + F+ EV M H NV+ F+G Y
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRI 211
+ K+ I E++ G+L I +++ + W A IA G+ YLH ++ I
Sbjct: 78 KDKRLNFITEYIKGGTLRGII-----KSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 212 VHFDIKPHNILLGEDFCPKISDFGLAKL------------SEKKESFISMLGARGTIGYI 259
+H D+ HN L+ E+ ++DFGLA+L S KK G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAE 295
APE+ N K DV+S+G+++ E ++GR NA+
Sbjct: 190 APEMI--NGRSYDEKVDVFSFGIVLCE-IIGRVNAD 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
LGQG FG V K + D R A+K +++++ ++EV ++ +H VV + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 153 K----------KKRALIY---EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARG 199
+ KK++ ++ E+ NG+L I+ E+ N R WR QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH-SENLNQQRDEYWRLFRQIL----EA 128
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI------------ 247
L Y+H I+H D+KP NI + E KI DFGLAK + +
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
++ A GT Y+A EV G + K D+YS G++ EM+
Sbjct: 186 NLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 211
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 270 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 211
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 270 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 160 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 213
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 271
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 272 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 325
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 196
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 255 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 135 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 188
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 246
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 247 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 300
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 79
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKL----EWRT 188
+ M + + +VV LG + + +I E M G L ++ + N +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 194
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 195 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 233
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 196
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 255 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 79
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 194
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 195 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 69
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKL----EWRT 188
+ M + + +VV LG + + +I E M G L ++ + N +
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 184
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 185 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 223
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 187
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 188 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 70
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 185
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 186 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 187
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 188 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 188
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 189 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N ++ EDF KI DFG+ + + E+
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 181
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 182 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V K K + VA+K ++ S+ + FI E+ +S+ +H N+V G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 154 KKRALIYEFMPNGSLDQFIYDEES---SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
L+ E+ GSL ++ E + W C ++G+ YLH
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPKA 126
Query: 211 IVHFDIKPHNILL-GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H D+KP N+LL KI DFG A + M +G+ ++APEVF
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF--EGS 179
Query: 270 GVSHKSDVYSYGMMILEMVVGRK 292
S K DV+S+G+++ E++ RK
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRK 202
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V G G VAVK +KN + F+ E + M++ H N+V LG E+
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 154 KKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIV 212
K ++ E+M GSL ++ S + + + ++ + +EYL G N V
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD----CLLKFSLDVCEAMEYLE-GNNF--V 130
Query: 213 HFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVS 272
H D+ N+L+ ED K+SDFGL KE+ + + + + APE S
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEAL--REAAFS 183
Query: 273 HKSDVYSYGMMILEM 287
KSDV+S+G+++ E+
Sbjct: 184 TKSDVWSFGILLWEI 198
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGK----LP--DGRLVAVKVLKNSKVNG-EEFINEVASM 135
+KR +LG+G FG V+ + LP D LVAVK LK + + ++F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSN---------INRKLEW 186
+ H ++V F G C E + +++E+M +G L++F+ L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESF 246
+ +A +A G+ YL + VH D+ N L+G+ KI DFG+++ + +
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 247 ISMLGARG--TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSE 303
+G R I ++ PE + R F + +SDV+S+G+++ E+ K ++S +
Sbjct: 192 --RVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 246
Query: 304 I 304
I
Sbjct: 247 I 247
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGK----LP--DGRLVAVKVLKNSKVNG-EEFINEVASM 135
+KR +LG+G FG V+ + LP D LVAVK LK + + ++F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSN---------INRKLEW 186
+ H ++V F G C E + +++E+M +G L++F+ L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESF 246
+ +A +A G+ YL + VH D+ N L+G+ KI DFG+++ + +
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 247 ISMLGARG--TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSE 303
+G R I ++ PE + R F + +SDV+S+G+++ E+ K ++S +
Sbjct: 186 --RVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 240
Query: 304 I 304
I
Sbjct: 241 I 241
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V K K + VA+K ++ S+ + FI E+ +S+ +H N+V G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 154 KKRALIYEFMPNGSLDQFIYDEES---SNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
L+ E+ GSL ++ E + W C ++G+ YLH
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPKA 125
Query: 211 IVHFDIKPHNILL-GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H D+KP N+LL KI DFG A + M +G+ ++APEVF
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF--EGS 178
Query: 270 GVSHKSDVYSYGMMILEMVVGRK 292
S K DV+S+G+++ E++ RK
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRK 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLK-NSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
K+GQG G+VY + G+ VA++ + + E INE+ M + + N+V++L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ E++ GSL + + ++ + + + LE+LH +
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H +IK NILLG D K++DFG A+++ ++ +M+ GT ++APEV R
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAY 194
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G K D++S G+M +EM+ G
Sbjct: 195 G--PKVDIWSLGIMAIEMIEG 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E ++R E RT I +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYR-----ELQKLSRFDEQRTATYI-TELANALSYCH---S 130
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG + KI+DFG + S ++++ GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEM--- 181
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG E Y+ I EF
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY--------QETYRRIS-RVEFTFPD 231
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 232 FVTEGARDLISRLL 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGK----LP--DGRLVAVKVLKNSKVNG-EEFINEVASM 135
+KR +LG+G FG V+ + LP D LVAVK LK + + ++F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSN---------INRKLEW 186
+ H ++V F G C E + +++E+M +G L++F+ L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESF 246
+ +A +A G+ YL + VH D+ N L+G+ KI DFG+++ + +
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 247 ISMLGARG--TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSE 303
+G R I ++ PE + R F + +SDV+S+G+++ E+ K ++S +
Sbjct: 215 --RVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
Query: 304 I 304
I
Sbjct: 270 I 270
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 161 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 214
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 272
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 273 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 326
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 127
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++++ GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEM--- 178
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 228
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 229 FVTEGARDLISRLL 242
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V G G VAVK +KN + F+ E + M++ H N+V LG E+
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 154 KKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIV 212
K ++ E+M GSL ++ S + + + ++ + +EYL G N V
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD----CLLKFSLDVCEAMEYLE-GNNF--V 124
Query: 213 HFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVS 272
H D+ N+L+ ED K+SDFGL KE+ + + + + APE S
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFS 177
Query: 273 HKSDVYSYGMMILEM 287
KSDV+S+G+++ E+
Sbjct: 178 TKSDVWSFGILLWEI 192
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKL------PDGRLVAVKVLKN--SKVNGEEFIN 130
+ +V R + LG G FG VY+G++ P VAVK L S+ + +F+
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTM 189
E +SK +H N+V +G + R ++ E M G L F+ + + L +
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKK 243
+A IA G +YL +H DI N LL CP KI DFG+A+ +
Sbjct: 184 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRA 237
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV-------VGRKNAEV 296
+ A + ++ PE F G + K+D +S+G+++ E+ + N EV
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295
Query: 297 K--VSLSSEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTEDLQI 353
V+ + P + PG +++ + + E ++LE +E T+D +
Sbjct: 296 LEFVTSGGRMDPPKNC-----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V G G VAVK +KN + F+ E + M++ H N+V LG E+
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 154 KKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIV 212
K ++ E+M GSL ++ S + + + ++ + +EYL G N V
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD----CLLKFSLDVCEAMEYL-EGNNF--V 311
Query: 213 HFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVS 272
H D+ N+L+ ED K+SDFGL KE+ + + + + APE S
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFS 364
Query: 273 HKSDVYSYGMMILEM 287
KSDV+S+G+++ E+
Sbjct: 365 TKSDVWSFGILLWEI 379
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G FG V G G VAVK +KN + F+ E + M++ H N+V LG E+
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 154 KKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIV 212
K ++ E+M GSL ++ S + + + ++ + +EYL G N V
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD----CLLKFSLDVCEAMEYLE-GNNF--V 139
Query: 213 HFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVS 272
H D+ N+L+ ED K+SDFGL KE+ + + + + APE S
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFS 192
Query: 273 HKSDVYSYGMMILEM 287
KSDV+S+G+++ E+
Sbjct: 193 TKSDVWSFGILLWEI 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 93 KLGQGGFGSVYKGKLPDGR-LVAVKVLKN-SKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG VYK + + L A KV+ S+ E+++ E+ ++ H N+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
Y + ++ EF G++D + + + R L T QI V + L+ L+ + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPL---TESQIQVVCKQTLDALNYLHDNK 155
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLA----KLSEKKESFISMLGARGTIGYIAPE-VFC 265
I+H D+K NIL D K++DFG++ + ++++SFI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMC 209
Query: 266 RNFGG--VSHKSDVYSYGMMILEM 287
+K+DV+S G+ ++EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 93 KLGQGGFGSVYKGKLPDGR-LVAVKVLKN-SKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG VYK + + L A KV+ S+ E+++ E+ ++ H N+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
Y + ++ EF G++D + + + R L T QI V + L+ L+ + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPL---TESQIQVVCKQTLDALNYLHDNK 155
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLA----KLSEKKESFISMLGARGTIGYIAPE-VFC 265
I+H D+K NIL D K++DFG++ + ++++SFI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMC 209
Query: 266 RNFGG--VSHKSDVYSYGMMILEM 287
+K+DV+S G+ ++EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 89 SFSNKLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNG---EEFINEVASMSKTSHV 141
+ LG+G FGSV + +L DG V AVK+LK + EEF+ E A M + H
Sbjct: 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHP 85
Query: 142 NVVSFLGFCYEKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+V +G + + +I FM +G L F+ L +T+ + V
Sbjct: 86 HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD 145
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
IA G+EYL + +H D+ N +L ED ++DFGL++ + + ++
Sbjct: 146 IACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV-------GRKNAEV 296
+ ++A E N V SDV+++G+ + E++ G +NAE+
Sbjct: 203 VKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 184
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 185 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 187
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 188 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 187
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 188 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G +Y +E +++ E RT I +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGE----VY-KELQKLSKFDEQRTATYI-TELANALSYCH---S 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 182
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 232
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 233 FVTEGARDLISRLL 246
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 35/253 (13%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 127
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSEKKESFISMLGARGTIGYIAPEVFCRN 267
R++H DIKP N+LLG KI+DFG + + + +S GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-----GTLDYLPPEM---- 178
Query: 268 FGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAGV 325
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPDF 229
Query: 326 VTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 230 VTEGARDLISRLL 242
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 23/221 (10%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL-------PDGRLVAVKVLKNSKVNGE--EFINEV 132
+V R + S +LGQG FG VY+G P+ R VA+K + + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIY----DEESSNINRKLEWRT 188
+ M + + +VV LG + + +I E M G L ++ + E++ +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
M Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + E+
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYY 181
Query: 249 MLGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
G +G + +++PE G + SDV+S+G+++ E+
Sbjct: 182 RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E ++R E RT I +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYR-----ELQKLSRFDEQRTATYI-TELANALSYCH---S 130
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG + KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 181
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG E Y+ I EF
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY--------QETYRRIS-RVEFTFPD 231
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 232 FVTEGARDLISRLL 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 152
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S +++ GT+ Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEM--- 203
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 204 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 253
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 254 FVTEGARDLISRLL 267
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 143
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 194
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 195 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 244
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 245 FVTEGARDLISRLL 258
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 29/209 (13%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE------FINEVASMSKTSHVNVVSF 146
K+G+G +G VYK K GR+VA LK +++ E+ I E++ + + H N+VS
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV---GIARGLEYL 203
+ + ++ L++EFM + + DE + + QI + + RG+ +
Sbjct: 85 IDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDS-------QIKIYLYQLLRGVAHC 135
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
H+ RI+H D+KP N+L+ D K++DFGLA+ S+ + T+ Y AP+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
V + S D++S G + EM+ G+
Sbjct: 190 VLMGS-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 125
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 176
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 177 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 226
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 227 FVTEGARDLISRLL 240
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 42/273 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFI 129
P+++ D + LG+G FG+VY + + + A+KVL +++ +
Sbjct: 2 PRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 130 NEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTM 189
EV S H N++ G+ ++ + LI E+ P G++ + E +++ E RT
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTA 111
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFI 247
I +A L Y H + R++H DIKP N+LLG KI+DFG + S ++ +
Sbjct: 112 TYI-TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 167
Query: 248 SMLGARGTIGYIAPEVFCRNFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIY 305
GT+ Y+ PE+ G H K D++S G++ E +VG+ E
Sbjct: 168 ------GTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------ 211
Query: 306 FPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMI 338
YK I EF VTE +++ +++
Sbjct: 212 --QETYKRIS-RVEFTFPDFVTEGARDLISRLL 241
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 29/209 (13%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE------FINEVASMSKTSHVNVVSF 146
K+G+G +G VYK K GR+VA LK +++ E+ I E++ + + H N+VS
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV---GIARGLEYL 203
+ + ++ L++EFM + + DE + + QI + + RG+ +
Sbjct: 85 IDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDS-------QIKIYLYQLLRGVAHC 135
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
H+ RI+H D+KP N+L+ D K++DFGLA+ S+ + T+ Y AP+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
V + S D++S G + EM+ G+
Sbjct: 190 VLMGS-KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 182
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 232
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 233 FVTEGARDLISRLL 246
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S +++ GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 108 PDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPN 165
P VA+K L+ + + +E + E+ +MS+ H N+VS+ K + L+ + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 166 GSLDQFIYD-----EESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
GS+ I E S + L+ T+ I + GLEYLH+ I H D+K N
Sbjct: 98 GSVLDIIKHIVAKGEHKSGV---LDESTIATILREVLEGLEYLHKNGQI---HRDVKAGN 151
Query: 221 ILLGEDFCPKISDFGLAKL---------SEKKESFISMLGARGTIGYIAPEVFCRNFGGV 271
ILLGED +I+DFG++ ++ +++F+ GT ++APEV G
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV------GTPCWMAPEVM-EQVRGY 204
Query: 272 SHKSDVYSYGMMILEMVVG 290
K+D++S+G+ +E+ G
Sbjct: 205 DFKADIWSFGITAIELATG 223
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 152
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 203
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 204 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 253
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 254 FVTEGARDLISRLL 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPE---- 181
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 232
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 233 FVTEGARDLISRLL 246
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 108 PDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPN 165
P VA+K L+ + + +E + E+ +MS+ H N+VS+ K + L+ + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 166 GSLDQFIYD-----EESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
GS+ I E S + L+ T+ I + GLEYLH+ I H D+K N
Sbjct: 93 GSVLDIIKHIVAKGEHKSGV---LDESTIATILREVLEGLEYLHKNGQI---HRDVKAGN 146
Query: 221 ILLGEDFCPKISDFGLAKL---------SEKKESFISMLGARGTIGYIAPEVFCRNFGGV 271
ILLGED +I+DFG++ ++ +++F+ GT ++APEV G
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV------GTPCWMAPEVM-EQVRGY 199
Query: 272 SHKSDVYSYGMMILEMVVG 290
K+D++S+G+ +E+ G
Sbjct: 200 DFKADIWSFGITAIELATG 218
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 130
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 181
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 231
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 232 FVTEGARDLISRLL 245
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYR 187
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 188 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 128
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEM--- 179
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 180 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 229
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 230 FVTEGARDLISRLL 243
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G +Y +E +++ E RT I +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGE----VY-KELQKLSKFDEQRTATYI-TELANALSYCH---S 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX------GTLDYLPPEM--- 182
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 232
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 233 FVTEGARDLISRLL 246
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEM--- 182
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 232
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 233 FVTEGARDLISRLL 246
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 127
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEM--- 178
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 228
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 229 FVTEGARDLISRLL 242
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G+ +Y E +++ E RT I +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGT----VY-RELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 174
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 175 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 224
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 225 FVTEGARDLISRLL 238
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKV-LKNSKVNGEE-----FINEVASMSKTSHVNVVSF 146
KLG G + +VYKG + V V LK K++ EE I E++ M + H N+V
Sbjct: 12 KLGNGTYATVYKGL---NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+ + K L++EFM N L +++ N R LE + + +GL + H
Sbjct: 69 YDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF- 264
+I+H D+KP N+L+ + K+ DFGLA+ +F S + T+ Y AP+V
Sbjct: 128 ---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV---VTLWYRAPDVLM 181
Query: 265 -CRNFGGVSHKSDVYSYGMMILEMVVGR 291
R + S D++S G ++ EM+ G+
Sbjct: 182 GSRTY---STSIDIWSCGCILAEMITGK 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 44/274 (16%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFI 129
P+++ D + LG+G FG+VY + + + A+KVL +++ +
Sbjct: 2 PRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 130 NEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTM 189
EV S H N++ G+ ++ + LI E+ P G++ + E +++ E RT
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTA 111
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGL---AKLSEKKESF 246
I +A L Y H + R++H DIKP N+LLG KI+DFG A S + E
Sbjct: 112 TYI-TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC 167
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEI 304
GT+ Y+ PE+ G H K D++S G++ E +VG+ E
Sbjct: 168 -------GTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY----- 211
Query: 305 YFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMI 338
YK I EF VTE +++ +++
Sbjct: 212 ---QETYKRIS-RVEFTFPDFVTEGARDLISRLL 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
LGQG FG V K + D R A+K +++++ ++EV ++ +H VV + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 153 K----------KKRALIY---EFMPNGSLDQFIYDEESSNINRKLE--WRTMCQIAVGIA 197
+ KK++ ++ E+ N +L I+ E N+N++ + WR QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE---NLNQQRDEYWRLFRQIL---- 126
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI---------- 247
L Y+H I+H D+KP NI + E KI DFGLAK + +
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 248 --SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
++ A GT Y+A EV G + K D+YS G++ EM+
Sbjct: 184 SDNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 186
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 187 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH D+ N ++ DF KI DFG+ + + E+
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 187
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 188 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 93 KLGQGGFGSVYKGKLPDGR-LVAVKVLKN-SKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG VYK + + L A KV+ S+ E+++ E+ ++ H N+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
Y + ++ EF G++D + + + R L T QI V + L+ L+ + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPL---TESQIQVVCKQTLDALNYLHDNK 155
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLA----KLSEKKESFISMLGARGTIGYIAPE-VFC 265
I+H D+K NIL D K++DFG++ + ++++ FI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMC 209
Query: 266 RNFGG--VSHKSDVYSYGMMILEM 287
+K+DV+S G+ ++EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI+DFG + S ++ GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + + A+KVL +++ + EV S H N++ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
+++H DIKP N+LLG KI+DFG + S ++ + GT+ Y+ PE+
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEM--- 177
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QDTYKRIS-RVEFTFPD 227
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 228 FVTEGARDLISRLL 241
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 22/204 (10%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
KLG+G +GSVYK + G++VA+K + + + +E I E++ M + +VV + G +
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRI 211
+ ++ E+ GS+ I N+ L + I +GLEYLH +R
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLR-----NKTLTEDEIATILQSTLKGLEYLH---FMRK 146
Query: 212 VHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEVFCRN 267
+H DIK NILL + K++DFG+A +L++ K+ I GT ++APEV
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI------GTPFWMAPEVIQEI 200
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
G + +D++S G+ +EM G+
Sbjct: 201 --GYNCVADIWSLGITAIEMAEGK 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNSKVNGE-EFINEVASMSKTSHVNV 143
+ ++LG+G FGSV + L D G LVAVK L++S + + +F E+ + +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 144 VSFLGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G Y +++L + E++P+G L F+ + +L+ + + I +G+E
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGME 128
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE-KKESFISMLGARGTIGYIA 260
YL + R VH D+ NIL+ + KI+DFGLAKL K+ ++ + I + A
Sbjct: 129 YLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE N S +SDV+S+G+++ E+
Sbjct: 186 PESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 93 KLGQGGFGSVY--KGKLPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSF 146
KLG G +G V K KL G A+K++K S V N ++EVA + + H N++
Sbjct: 11 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 147 LGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F +K+ L+ E G L D+ I ++ S ++ + I + G YLH+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK 122
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
IVH D+KP N+LL D KI DFGL+ E L GT YIAPE
Sbjct: 123 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAPE 176
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
V + + K DV+S G+++ ++ G
Sbjct: 177 VLRKKY---DEKCDVWSCGVILYILLCG 201
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNSKVNGE-EFINEVASMSKTSHVNV 143
+ ++LG+G FGSV + L D G LVAVK L++S + + +F E+ + +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 144 VSFLGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G Y +++L + E++P+G L F+ + +L+ + + I +G+E
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGME 129
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE-KKESFISMLGARGTIGYIA 260
YL + R VH D+ NIL+ + KI+DFGLAKL K+ ++ + I + A
Sbjct: 130 YLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE N S +SDV+S+G+++ E+
Sbjct: 187 PESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNSKVNGE-EFINEVASMSKTSHVNV 143
+ ++LG+G FGSV + L D G LVAVK L++S + + +F E+ + +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 144 VSFLGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G Y +++L + E++P+G L F+ + +L+ + + I +G+E
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGME 141
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE-KKESFISMLGARGTIGYIA 260
YL + R VH D+ NIL+ + KI+DFGLAKL K+ ++ + I + A
Sbjct: 142 YLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE N S +SDV+S+G+++ E+
Sbjct: 199 PESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 36/214 (16%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
+G GGFG V+K K DG+ V+K K N E+ EV +++K HVN+V + G C++
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTY---VIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 74
Query: 153 ---------------KKKRALI--YEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
K + L EF G+L+Q+I +++ L Q
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ---- 130
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
I +G++Y+H + ++++ D+KP NI L + KI DFGL S K + ++GT
Sbjct: 131 ITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDG--KRXRSKGT 184
Query: 256 IGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMV 288
+ Y++PE + +++G + D+Y+ G+++ E++
Sbjct: 185 LRYMSPEQISSQDYG---KEVDLYALGLILAELL 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFI---- 172
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 173 ----YDEESSNINRKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDF 227
D + N L R + + +A+G+ +L + C +H D+ N+LL
Sbjct: 146 RVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGH 201
Query: 228 CPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMILE 286
KI DFGLA+ ++I AR + ++APE F V + +SDV+SYG+++ E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWE 258
Query: 287 MVVGRKNAEVKVSLSSEIY 305
+ N + ++S+ Y
Sbjct: 259 IFSLGLNPYPGILVNSKFY 277
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 128
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI++FG + S ++ + GT+ Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 179
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 180 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 229
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 230 FVTEGARDLISRLL 243
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ R +H D+ N+LL KI DFGL + L + + ++ + + APE
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 190 LKTRTF---SHASDTWMFGVTLWEM 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL +++ + EV S H N++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ + LI E+ P G++ + E +++ E RT I +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYR-----ELQKLSKFDEQRTATYI-TELANALSYCH---S 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H DIKP N+LLG KI++FG + S ++ + GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEM--- 180
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
G H K D++S G++ E +VG+ E YK I EF
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRIS-RVEFTFPD 230
Query: 325 VVTEEEKEMAKKMI 338
VTE +++ +++
Sbjct: 231 FVTEGARDLISRLL 244
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 73 LAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR----LVAVKVLKNSKV--NGE 126
L P+ + R + LG+G FG VY+G + + VAVK K N E
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 70
Query: 127 EFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEW 186
+F++E M H ++V +G E++ +I E P G L ++ E + N + L
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVL-- 125
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESF 246
T+ ++ I + + YL +I VH DI NIL+ C K+ DFGL++ E ++ +
Sbjct: 126 -TLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 181
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+ + R I +++PE NF + SDV+ + + + E++
Sbjct: 182 KASV-TRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEIL 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 89 SFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH 140
+ LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 141 -VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK------LEWRTMCQI 192
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+ +A+G+E+L + + +H D+ NILL E KI DFGLA+ K ++ A
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ R +H D+ N+LL KI DFGL + L + + ++ + + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 186 LKTRTF---SHASDTWMFGVTLWEM 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ R +H D+ N+LL KI DFGL + L + + ++ + + APE
Sbjct: 133 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 190 LKTRTF---SHASDTWMFGVTLWEM 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 116/274 (42%), Gaps = 58/274 (21%)
Query: 93 KLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNG--------------EEFINEVASMSK 137
KLG G +G V K +G A+KV+K S+ + EE NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGI 196
H N++ +KK L+ EF G L + I INR K + I I
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-------INRHKFDECDAANIMKQI 155
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGED---FCPKISDFGLAKLSEKKESFISMLGAR 253
G+ YLH+ IVH DIKP NILL KI DFGL+ K L
Sbjct: 156 LSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--- 209
Query: 254 GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP------ 307
GT YIAPEV + + + K DV+S G+++ ++ G Y P
Sbjct: 210 GTAYYIAPEVLKKKY---NEKCDVWSCGVIMYILLCG--------------YPPFGGQND 252
Query: 308 NSIYKHIEPGN---EFQLAGVVTEEEKEMAKKMI 338
I K +E G +F +++E KE+ K M+
Sbjct: 253 QDIIKKVEKGKYYFDFNDWKNISDEAKELIKLML 286
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ R +H D+ N+LL KI DFGL + L + + ++ + + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 186 LKTRTF---SHASDTWMFGVTLWEM 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ R +H D+ N+LL KI DFGL + L + + ++ + + APE
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 196 LKTRTF---SHASDTWMFGVTLWEM 217
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKK 154
+G FG V+K +L + VAVK+ + E+ S H N++ F+ EK+
Sbjct: 24 ARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA--AEKR 80
Query: 155 ------KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR--- 205
+ LI F GSL ++ NI + W +C +A ++RGL YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL----KGNI---ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 206 -----GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
G I H D K N+LL D ++DFGLA E + G GT Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 261 PEVF--CRNFGGVSH-KSDVYSYGMMILEMVVGRKNAEVKV 298
PEV NF + + D+Y+ G+++ E+V K A+ V
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPV 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 94 LGQGGFGSVYKGKLPDGR----LVAVKVLKNSKV--NGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG VY+G + + VAVK K N E+F++E M H ++V +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E++ +I E P G L ++ E + N + L T+ ++ I + + YL
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVL---TLVLYSLQICKAMAYLE--- 126
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
+I VH DI NIL+ C K+ DFGL++ E ++ + + + R I +++PE N
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESI--N 183
Query: 268 FGGVSHKSDVYSYGMMILEMV 288
F + SDV+ + + + E++
Sbjct: 184 FRRFTTASDVWMFAVCMWEIL 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 93 KLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---HVNV 143
++G G +G+VYK + P G VA+K ++ NGEE + EVA + + H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 144 VSFLGFCYEKK-----KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
V + C + K L++E +DQ + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
GL++LH C IVH D+KP NIL+ K++DFGLA++ + + ++ T+ Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV---VTLWY 177
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
APEV ++ + D++S G + EM
Sbjct: 178 RAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 90 FSNKLGQGGFGSVYKGKLP------DGRLVAVKVLKN--SKVNGEEFINEVASMSKTSHV 141
+ +G+G FG V++ + P +VAVK+LK S +F E A M++ +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNI----NRKLEWRT--------- 188
N+V LG C K L++E+M G L++F+ + + L R
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 189 ------MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEK 242
+C IA +A G+ YL + VH D+ N L+GE+ KI+DFGL++
Sbjct: 171 LSCAEQLC-IARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 243 KESFISMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ + + I ++ PE +F + + +SDV++YG+++ E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLWEI 269
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 93 KLGQGGFGSVY--KGKLPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSF 146
KLG G +G V K KL G A+K++K S V N ++EVA + + H N++
Sbjct: 28 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
F +K+ L+ E G L D+ I ++ S ++ + I + G YLH+
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK 139
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
IVH D+KP N+LL D KI DFGL+ E L GT YIAPE
Sbjct: 140 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAPE 193
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
V + + K DV+S G+++ ++ G
Sbjct: 194 VLRKKY---DEKCDVWSCGVILYILLCG 218
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 93 KLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---HVNV 143
++G G +G+VYK + P G VA+K ++ NGEE + EVA + + H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 144 VSFLGFCYEKK-----KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
V + C + K L++E +DQ + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
GL++LH C IVH D+KP NIL+ K++DFGLA++ + + ++ T+ Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV---VTLWY 177
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
APEV ++ + D++S G + EM
Sbjct: 178 RAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 93 KLGQGGFGSVYKG--KLPDGRL-VAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+LG G FGSV +G ++ ++ VA+KVLK K + EE + E M + + +V +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEES----SNINRKLEWRTMCQIAVGIARGLEYL 203
G C + + L+ E G L +F+ + SN+ L ++ G++YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---------QVSMGMKYL 126
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA-RGTIGYIAPE 262
VH D+ N+LL KISDFGL+K +S+ + A + + + APE
Sbjct: 127 EEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMV 288
C NF S +SDV+SYG+ + E +
Sbjct: 184 --CINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 69 NYVSLAPKRYNYS---DVKRMTNSFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLK 119
NYV + P + Y + R SF LG G FG V + K VAVK+LK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 120 NSK--VNGEEFINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
S E ++E+ +S +H+N+V+ LG C +I E+ G L F+ +
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 177 SSNINRKLEWRTMC------------QIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILL 223
S I K M + +A+G+ +L + C +H D+ NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 201
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGM 282
KI DFGLA+ + +++ AR + ++APE F V + +SDV+SYG+
Sbjct: 202 THGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 258
Query: 283 MILEM 287
+ E+
Sbjct: 259 FLWEL 263
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 94 LGQGGFGSVYKGKLPDGR----LVAVKVLKNSKV--NGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG VY+G + + VAVK K N E+F++E M H ++V +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E++ +I E P G L ++ E + N + L T+ ++ I + + YL
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVL---TLVLYSLQICKAMAYLE--- 130
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
+I VH DI NIL+ C K+ DFGL++ E ++ + + + R I +++PE N
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESI--N 187
Query: 268 FGGVSHKSDVYSYGMMILEMV 288
F + SDV+ + + + E++
Sbjct: 188 FRRFTTASDVWMFAVCMWEIL 208
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 69 NYVSLAPKRYNYS---DVKRMTNSFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLK 119
NYV + P + Y + R SF LG G FG V + K VAVK+LK
Sbjct: 21 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 120 NSK--VNGEEFINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
S E ++E+ +S +H+N+V+ LG C +I E+ G L F+ +
Sbjct: 81 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 177 SSNINRKLEWRTMC------------QIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILL 223
S I K M + +A+G+ +L + C +H D+ NILL
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 196
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGM 282
KI DFGLA+ + +++ AR + ++APE F V + +SDV+SYG+
Sbjct: 197 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 253
Query: 283 MILEM 287
+ E+
Sbjct: 254 FLWEL 258
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVL------KNSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+V+KG +P+G + + V K+ + + + + + ++ H ++V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
LG C L+ +++P GSL + + L + + V IA+G+ YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA-----LGPQLLLNWGVQIAKGMYYLEEH 152
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+VH ++ N+LL +++DFG+A L + + A+ I ++A E
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI-- 207
Query: 267 NFGGVSHKSDVYSYGMMILEMV 288
+FG +H+SDV+SYG+ + E++
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELM 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 69 NYVSLAPKRYNYS---DVKRMTNSFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLK 119
NYV + P + Y + R SF LG G FG V + K VAVK+LK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 120 NSK--VNGEEFINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
S E ++E+ +S +H+N+V+ LG C +I E+ G L F+ +
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 177 SSNINRKLEWRTMC------------QIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILL 223
S I K M + +A+G+ +L + C +H D+ NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 201
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGM 282
KI DFGLA+ + +++ AR + ++APE F V + +SDV+SYG+
Sbjct: 202 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 258
Query: 283 MILEM 287
+ E+
Sbjct: 259 FLWEL 263
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH ++ N ++ DF KI DFG+ + + E+
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 187
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 188 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVL------KNSKVNGEEFINEVASMSKTSHVNVVSF 146
LG G FG+V+KG +P+G + + V K+ + + + + + ++ H ++V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
LG C L+ +++P GSL + + L + + V IA+G+ YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA-----LGPQLLLNWGVQIAKGMYYLEEH 134
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+VH ++ N+LL +++DFG+A L + + A+ I ++A E
Sbjct: 135 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI-- 189
Query: 267 NFGGVSHKSDVYSYGMMILEMV 288
+FG +H+SDV+SYG+ + E++
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELM 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPD------GRLVAVKVLKNSKVNGE--EFINEVA 133
+V R + +LGQG FG VY+G D VAVK + S E EF+NE +
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYD---EESSNINRKLE-WRTM 189
M + +VV LG + + ++ E M +G L ++ E +N R + M
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISM 249
Q+A IA G+ YL+ + VH ++ N ++ DF KI DFG+ + + E+
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 188
Query: 250 LGARG--TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G +G + ++APE G + SD++S+G+++ E+
Sbjct: 189 KGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEIT 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 31/261 (11%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE- 175
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+ +
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR 145
Query: 176 ---------ESSNINRKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGE 225
S N +L R + + +A+G+ +L + C +H D+ N+LL
Sbjct: 146 PPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTN 201
Query: 226 DFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMI 284
KI DFGLA+ ++I AR + ++APE F V + +SDV+SYG+++
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILL 258
Query: 285 LEMVVGRKNAEVKVSLSSEIY 305
E+ N + ++S+ Y
Sbjct: 259 WEIFSLGLNPYPGILVNSKFY 279
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 69 NYVSLAPKRYNYS---DVKRMTNSFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLK 119
NYV + P + Y + R SF LG G FG V + K VAVK+LK
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 120 NSK--VNGEEFINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
S E ++E+ +S +H+N+V+ LG C +I E+ G L F+ +
Sbjct: 63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 177 SSNINRKLEWRTMC------------QIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILL 223
S I K M + +A+G+ +L + C +H D+ NILL
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 178
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGM 282
KI DFGLA+ + +++ AR + ++APE F V + +SDV+SYG+
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 235
Query: 283 MILEM 287
+ E+
Sbjct: 236 FLWEL 240
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 89 SFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH 140
+ LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 141 -VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK------LEWRTMCQI 192
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+ +A+G+E+L + + +H D+ NILL E KI DFGLA+ K ++ A
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 92 NKLGQGGFGSVYKGK--LPDGRLVAVKVLKNSKVNGEEF--INEVASMSKTSHVNVVSFL 147
+KLG+G + +VYKGK L D LVA+K ++ G I EV+ + H N+V+
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ +K L++E++ + L Q++ ++ NI + + + RGL Y HR
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYL--DDCGNI---INMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
+++H D+KP N+L+ E K++DFGLA+ K + T+ Y P++ +
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
S + D++ G + EM GR
Sbjct: 176 -TDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 93 KLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---HVNV 143
++G G +G+VYK + P G VA+K ++ NGEE + EVA + + H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 144 VSFLGFCYEKK-----KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
V + C + K L++E +DQ + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
GL++LH C IVH D+KP NIL+ K++DFGLA++ + + ++ T+ Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV---VTLWY 177
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
APEV ++ + D++S G + EM
Sbjct: 178 RAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKVNGEEFIN-EV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K + + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFI---------YDEESSNINRK-LEWRTM 189
+NVV+ LG C + +I EF G+L ++ Y E ++ + L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++
Sbjct: 153 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 209 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 245
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKVNGEEFIN-EV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K + + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKVNGEEFIN-EV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K + + G+ F N E+
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNREL 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT-IGYIAPEV 263
+ R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 186 LKTRTF---SHASDTWMFGVTLWEM 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 93 KLGQGGFGSVYKGKL--PDGRLV--AVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
KLG G FG V +G+ P G+ V AVK LK ++ E FI EV +M H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G + ++ E P GSL + + + T+ + AV +A G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG-----TLSRYAVQVAEGMGYLE 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT-IGYIAPEV 263
+ R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 264 F-CRNFGGVSHKSDVYSYGMMILEM 287
R F SH SD + +G+ + EM
Sbjct: 196 LKTRTF---SHASDTWMFGVTLWEM 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 38/268 (14%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 11 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 70
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+ +
Sbjct: 71 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 130
Query: 177 SSNIN-----------------RKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKP 218
+ + R LE R + + +A+G+ +L + C +H D+
Sbjct: 131 EAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 186
Query: 219 HNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDV 277
N+LL KI DFGLA+ ++I AR + ++APE F V + +SDV
Sbjct: 187 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDV 243
Query: 278 YSYGMMILEMVVGRKNAEVKVSLSSEIY 305
+SYG+++ E+ N + ++S+ Y
Sbjct: 244 WSYGILLWEIFSLGLNPYPGILVNSKFY 271
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 37/227 (16%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKT-SH 140
F LG G FG V K VAVK+LK + E ++E+ M++ SH
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSL-------------DQFIYD-----EESSNINR 182
N+V+ LG C LI+E+ G L D+ Y+ EE ++N
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN- 167
Query: 183 KLEWRTMCQIAVGIARGLEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE 241
L + + A +A+G+E+L + C VH D+ N+L+ KI DFGLA+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 242 KKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMILEM 287
+++ AR + ++APE F G+ + KSDV+SYG+++ E+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESL---FEGIYTIKSDVWSYGILLWEI 267
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 19/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGK---LPD--GRLVAVKVLKNSKVNGE-EFINEVASMSKTSHVNV 143
+ ++LG+G FGSV + L D G LVAVK L++S + + +F E+ + +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 144 VSFLGFCYE--KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V + G Y + + L+ E++P+G L F+ + +L+ + + I +G+E
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGME 125
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE-KKESFISMLGARGTIGYIA 260
YL + R VH D+ NIL+ + KI+DFGLAKL K+ + + I + A
Sbjct: 126 YLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEM 287
PE N S +SDV+S+G+++ E+
Sbjct: 183 PESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 69 NYVSLAPKRYNYSD---VKRMTNSFSNKLGQGGFGSVYK------GKLPDGRLVAVKVLK 119
+Y + P + Y++ R F LG G FG V + GK VAVK+LK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 120 NSKVNGEE--FINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFI---- 172
++ E+ ++E+ MS H N+V+ LG C +I E+ G L F+
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 173 ----YDEESSNINRKLEWRTMCQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDF 227
D + N R + + +A+G+ +L + C +H D+ N+LL
Sbjct: 146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGH 201
Query: 228 CPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGMMILE 286
KI DFGLA+ ++I AR + ++APE F V + +SDV+SYG+++ E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWE 258
Query: 287 MVVGRKNAEVKVSLSSEIY 305
+ N + ++S+ Y
Sbjct: 259 IFSLGLNPYPGILVNSKFY 277
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 25 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 72
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 73 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 129
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 130 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 186
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 187 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 51 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 98
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 155
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 156 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 213 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 36 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 83
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 84 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 140
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 141 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 197
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 198 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 29 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 133
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 134 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 191 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVL--KNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
LG+G +G VY G+ L + +A+K + ++S+ + + E+A H N+V +LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
E + E +P GSL + S K +T+ I GL+YLH + +
Sbjct: 89 SENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQ 142
Query: 211 IVHFDIKPHNILLGE-DFCPKISDFG----LAKLSEKKESFISMLGARGTIGYIAPEVFC 265
IVH DIK N+L+ KISDFG LA ++ E+F GT+ Y+APE+
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEIID 196
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGR 291
+ G +D++S G I+EM G+
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 29 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 133
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 134 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 191 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 30 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 77
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 78 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 134
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 135 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 191
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 192 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH-VNVV 144
LG+G FG V + K R VAVK+LK + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 145 SFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTMCQIA 193
+ LG C + +I EF G+L ++ + + + K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 194 VGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 202 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 29/226 (12%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 133 ASMSKTSHVNVVSFLGFCYEK-KKRALIYEFMPNGSLDQFIY--DEESSNINRKLEWRTM 189
M K H N+V F Y +K+ ++Y + + + +Y S + L +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKESFIS 248
+ R L Y+H + I H DIKP N+LL D K+ DFG AK + E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+ +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 18 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 65
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 122
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 123 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 179
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 180 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 45 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 92
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 93 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 149
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 150 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 206
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 207 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 27/221 (12%)
Query: 80 YSDVKRMTN--SFSNKLGQ-GGFGSVYKGKLPDGR-LVAVKVLKN-SKVNGEEFINEVAS 134
Y V R N F +G+ G FG VYK + + L A KV+ S+ E+++ E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV 194
++ H N+V L Y + ++ EF G++D + + E +++ +C+ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ--VVCKQTL 118
Query: 195 GIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLS-----EKKESFISM 249
L YLH +I+H D+K NIL D K++DFG++ + ++++SFI
Sbjct: 119 D---ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-- 170
Query: 250 LGARGTIGYIAPE-VFCRNFGG--VSHKSDVYSYGMMILEM 287
GT ++APE V C +K+DV+S G+ ++EM
Sbjct: 171 ----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH-VNVV 144
LG+G FG V + K R VAVK+LK + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 145 SFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTMCQIA 193
+ LG C + +I EF G+L ++ + + + K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 194 VGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 202 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 35/224 (15%)
Query: 94 LGQGGFGSVYKGKL--PDGR----LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVS 145
LG+G FG V K GR VAVK+LK + E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN--------------------RKLE 185
G C + LI E+ GSL F+ ES + R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES 245
+ A I++G++YL +++VH D+ NIL+ E KISDFGL++ +++S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
++ R + ++A E + + +SDV+S+G+++ E+V
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK--------LEWRTMCQ 191
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
+ +A+G+E+L + + +H D+ NILL E KI DFGLA+ K +
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 252 ARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 210 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 22 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 69
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 70 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 126
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 127 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 183
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 184 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 51 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 98
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 99 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 155
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 156 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 213 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 17 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 121
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 21 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 68
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 125
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 126 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 183 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 49/227 (21%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
+G GGFG V+K K DG+ V++ K N E+ EV +++K HVN+V + G C++
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTY---VIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 75
Query: 153 ----------------------------KKKRALI--YEFMPNGSLDQFIYDEESSNINR 182
K + L EF G+L+Q+I +++
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 183 KLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEK 242
L QI +G++Y+H + +++H D+KP NI L + KI DFGL S K
Sbjct: 136 VLALELFEQIT----KGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLK 187
Query: 243 KESFISMLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEMV 288
+ ++GT+ Y++PE + +++G + D+Y+ G+++ E++
Sbjct: 188 NDG--KRTRSKGTLRYMSPEQISSQDYG---KEVDLYALGLILAELL 229
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTM 189
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++
Sbjct: 151 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 53 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 100
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 101 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 157
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 158 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 214
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 215 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVL--KNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
LG+G +G VY G+ L + +A+K + ++S+ + + E+A H N+V +LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
E + E +P GSL + S K +T+ I GL+YLH + +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQ 128
Query: 211 IVHFDIKPHNILLGE-DFCPKISDFG----LAKLSEKKESFISMLGARGTIGYIAPEVFC 265
IVH DIK N+L+ KISDFG LA ++ E+F GT+ Y+APE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEIID 182
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGR 291
+ G +D++S G I+EM G+
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 55 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 102
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 103 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 159
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 160 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 216
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 217 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTM 189
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++
Sbjct: 188 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 244 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 280
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 22 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELV 133
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 134 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 191 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 22 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELV 133
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 134 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 191 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 90 FSNKLGQGGFGSV-YKGKLPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
F KLG+GGF V L DG A+K +L + + + EE E +H N++ +
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 148 GFCYE----KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+C K + L+ F G+L I E + L + + +GI RGLE +
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEI--ERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 204 H-RGCNIRIVHFDIKPHNILLGEDFCPKISDFG-------LAKLSEKKESFISMLGARGT 255
H +G H D+KP NILLG++ P + D G + S + + R T
Sbjct: 151 HAKG----YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 256 IGYIAPEVF-CRNFGGVSHKSDVYSYGMMILEMVVG--------RKNAEVKVSLSSEIYF 306
I Y APE+F ++ + ++DV+S G ++ M+ G +K V +++ +++
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266
Query: 307 PNS 309
P S
Sbjct: 267 PQS 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 69 NYVSLAPKRYNYS---DVKRMTNSFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLK 119
N V + P + Y + R SF LG G FG V + K VAVK+LK
Sbjct: 19 NXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 78
Query: 120 NSK--VNGEEFINEVASMSKT-SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEE 176
S E ++E+ +S +H+N+V+ LG C +I E+ G L F+ +
Sbjct: 79 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 138
Query: 177 SSNINRKLEWRTMC------------QIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILL 223
S I K M + +A+G+ +L + C +H D+ NILL
Sbjct: 139 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILL 194
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGV-SHKSDVYSYGM 282
KI DFGLA+ + +++ AR + ++APE F V + +SDV+SYG+
Sbjct: 195 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGI 251
Query: 283 MILEM 287
+ E+
Sbjct: 252 FLWEL 256
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 19/221 (8%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEF 128
P +Y +++R +G+G FG V++G P+ VA+K KN + E+F
Sbjct: 380 PSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRT 188
+ E +M + H ++V +G E +I E G L F+ + S L+ +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-----LDLAS 492
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A ++ L YL R VH DI N+L+ + C K+ DFGL++ E + +
Sbjct: 493 LILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
G + I ++APE NF + SDV+ +G+ + E+++
Sbjct: 550 SKG-KLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 587
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVK-VLKNSKVNGEEFINEV 132
P+ +Y+D K +G G FG VY+ KL D G LVA+K VL++ + E +
Sbjct: 96 PQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 143
Query: 133 ASMSKTSHVNVVSFLGFCY---EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEW 186
M K H N+V F Y EKK L+ +++P + S + L
Sbjct: 144 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPV 200
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-KISDFGLAKLSEKKES 245
+ + R L Y+H + I H DIKP N+LL D K+ DFG AK + E
Sbjct: 201 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 257
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGRK 292
+S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 258 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 89 SFSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH 140
+ LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 141 -VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK---------LEWRTM 189
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K +
Sbjct: 151 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
LGQG FG V K + D R A+K +++++ ++EV ++ +H VV + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 153 K----------KKRALIY---EFMPNGSLDQFIYDEESSNINRKLE--WRTMCQIAVGIA 197
+ KK++ ++ E+ N +L I+ E N+N++ + WR QI
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE---NLNQQRDEYWRLFRQIL---- 126
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI---------- 247
L Y+H I+H ++KP NI + E KI DFGLAK + +
Sbjct: 127 EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 248 --SMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
++ A GT Y+A EV G + K D YS G++ E +
Sbjct: 184 SDNLTSAIGTAXYVATEVL-DGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 20 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 78
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELV 131
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 132 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 189 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 29/216 (13%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH-VNVV 144
LG+G FG V + K R VAVK+LK + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 145 SFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTMCQIA 193
+ LG C + +I EF G+L ++ + + + K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 194 VGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 202 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 12 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 70
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELV 123
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 124 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 181 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKGKLP---DGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 2 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 60
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELV 113
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 114 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 171 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 202
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 29/216 (13%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH-VNVV 144
LG+G FG V + K R VAVK+LK + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 145 SFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTMCQIA 193
+ LG C + +I EF G+L ++ + + + K L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 194 VGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K + A
Sbjct: 146 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 253 RGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
R + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 202 RLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFI-NEVASMS 136
+ D + + +S+ K+G+G G V + GR VAVK++ K E + NEV M
Sbjct: 39 DQGDPRLLLDSYV-KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR 97
Query: 137 KTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
H NVV ++ ++ EF+ G+L + +N + + T+C+ +
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEE-QIATVCE---AV 150
Query: 197 ARGLEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFG----LAKLSEKKESFISMLG 251
+ L YLH +G ++H DIK +ILL D K+SDFG ++K K++ +
Sbjct: 151 LQALAYLHAQG----VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV---- 202
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT ++APEV R+ + + D++S G+M++EMV G
Sbjct: 203 --GTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMVDG 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 77 RYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR---LVAVKVLKNSKVNGEE--FINE 131
R+ ++ R F + LG G F V + D R LVA+K + + G+E NE
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFI----YDEESSNINRKLEW 186
+A + K H N+V+ LI + + G L D+ + Y E
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----------- 115
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNIL---LGEDFCPKISDFGLAKLSEKK 243
R ++ + ++YLH ++ IVH D+KP N+L L ED ISDFGL+K+ E
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
S +S A GT GY+APEV + S D +S G++ ++ G
Sbjct: 172 GSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVL---KNSKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G+G +G V K + D GR+VA+K + K+ + + E+ + + H N+V+ L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
C +KK+ L++EF+ + LD E N L+++ + + I G+ + H
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDL---ELFPN---GLDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCRNF 268
I+H DIKP NIL+ + K+ DFG A+ L+ E + + R Y APE+
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR---WYRAPELL---V 197
Query: 269 GGVSH--KSDVYSYGMMILEMVVGRK----NAEVKVSLSSEIYFPNSIYKHIEPGNEFQL 322
G V + DV++ G ++ EM +G ++++ + N I +H E N+ +
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257
Query: 323 -AGVVTEEEKE 332
AGV E KE
Sbjct: 258 FAGVRLPEIKE 268
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 119
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 175
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 63 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 116
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 117 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 172
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 173 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 68 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 121
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 177
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 178 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 69 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 122
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 178
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 179 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 6 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELV 117
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 118 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 175 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 119
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 175
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 77 RYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR---LVAVKVLKNSKVNGEE--FINE 131
R+ ++ R F + LG G F V + D R LVA+K + + G+E NE
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFI----YDEESSNINRKLEW 186
+A + K H N+V+ LI + + G L D+ + Y E
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----------- 115
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNIL---LGEDFCPKISDFGLAKLSEKK 243
R ++ + ++YLH ++ IVH D+KP N+L L ED ISDFGL+K+ E
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
S +S A GT GY+APEV + S D +S G++ ++ G
Sbjct: 172 GSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 93 KLGQGGFGSVYKG--KLPDGRL-VAVKVLK--NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+LG G FGSV +G ++ ++ VA+KVLK K + EE + E M + + +V +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G C + + L+ E G L +F+ + ++ + ++ ++ G++YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGK-----REEIPVSNVAELLHQVSMGMKYLEEK- 455
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA-RGTIGYIAPEVFCR 266
VH ++ N+LL KISDFGL+K +S+ + A + + + APE C
Sbjct: 456 --NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CI 511
Query: 267 NFGGVSHKSDVYSYGMMILEMV 288
NF S +SDV+SYG+ + E +
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEAL 533
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTM 189
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K +
Sbjct: 151 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 77 RYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR---LVAVKVLKNSKVNGEE--FINE 131
R+ ++ R F + LG G F V + D R LVA+K + + G+E NE
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFI----YDEESSNINRKLEW 186
+A + K H N+V+ LI + + G L D+ + Y E
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----------- 115
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNIL---LGEDFCPKISDFGLAKLSEKK 243
R ++ + ++YLH ++ IVH D+KP N+L L ED ISDFGL+K+ E
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
S +S A GT GY+APEV + S D +S G++ ++ G
Sbjct: 172 GSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 6 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELV 117
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K L + + +
Sbjct: 118 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 175 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 40/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDG----RLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSF 146
LGQG FG V+ K G +L A+KVLK + + + + E + + +H +V
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 90
Query: 147 LGFCYEKK-KRALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
L + ++ + K LI +F+ G L + ++ EE + ++A+ L
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-------LAELALA----L 139
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLS---EKKE-SFISMLGARGTI 256
++LH ++ I++ D+KP NILL E+ K++DFGL+K S EKK SF GT+
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTV 190
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y+APEV R G + +D +S+G+++ EM+ G
Sbjct: 191 EYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTG 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEE----FINEVASMSKTSHVNVVSFL 147
+LG+G +G V K + +P G+++AVK ++ + VN +E ++ SM V+F
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + + + E M + SLD+F ++ + + + + +IAV I + LE+LH
Sbjct: 117 GALFREGDVWICMELM-DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHS-- 171
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR- 266
+ ++H D+KP N+L+ K+ DFG++ +S + A G Y+APE
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSVAKTIDA-GCKPYMAPERINPE 228
Query: 267 -NFGGVSHKSDVYSYGMMILEMVVGR 291
N G S KSD++S G+ ++E+ + R
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 75 PKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEF 128
P +Y +++R +G+G FG V++G P+ VA+K KN + E+F
Sbjct: 380 PSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRT 188
+ E +M + H ++V +G E +I E G L F+ + S L+ +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-----LDLAS 492
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ A ++ L YL R VH DI N+L+ C K+ DFGL++ E + +
Sbjct: 493 LILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA 549
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
G + I ++APE NF + SDV+ +G+ + E+++
Sbjct: 550 SKG-KLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 587
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 77 RYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR---LVAVKVLKNSKVNGEE--FINE 131
R+ ++ R F + LG G F V + D R LVA+K + + G+E NE
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFI----YDEESSNINRKLEW 186
+A + K H N+V+ LI + + G L D+ + Y E
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----------- 115
Query: 187 RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNIL---LGEDFCPKISDFGLAKLSEKK 243
R ++ + ++YLH ++ IVH D+KP N+L L ED ISDFGL+K+ E
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
S +S A GT GY+APEV + S D +S G++ ++ G
Sbjct: 172 GSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 40/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDG----RLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSF 146
LGQG FG V+ K G +L A+KVLK + + + + E + + +H +V
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 90
Query: 147 LGFCYEKK-KRALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
L + ++ + K LI +F+ G L + ++ EE + ++A+ L
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELALA----L 139
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLS---EKKE-SFISMLGARGTI 256
++LH ++ I++ D+KP NILL E+ K++DFGL+K S EKK SF GT+
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTV 190
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y+APEV R G + +D +S+G+++ EM+ G
Sbjct: 191 EYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTG 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKV-----LKNSKVNGEEFINEVASMSKTSHVNVVSF 146
K+G+G F VY+ L DG VA+K L ++K + I E+ + + +H NV+ +
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
E + ++ E G L + I + R + RT+ + V + LE++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMI--KHFKKQKRLIPERTVWKYFVQLCSALEHMH-- 153
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+ R++H DIKP N+ + K+ D GL + K + L GT Y++PE
Sbjct: 154 -SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGTPYYMSPERIHE 210
Query: 267 NFGGVSHKSDVYSYGMMILEMVV 289
N G + KSD++S G ++ EM
Sbjct: 211 N--GYNFKSDIWSLGCLLYEMAA 231
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 94 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 147
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 148 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 203
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 204 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 235
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 40/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDG----RLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSF 146
LGQG FG V+ K G +L A+KVLK + + + + E + + +H +V
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 91
Query: 147 LGFCYEKK-KRALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
L + ++ + K LI +F+ G L + ++ EE + ++A+ L
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELALA----L 140
Query: 201 EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLS---EKKE-SFISMLGARGTI 256
++LH ++ I++ D+KP NILL E+ K++DFGL+K S EKK SF GT+
Sbjct: 141 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTV 191
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y+APEV R G + +D +S+G+++ EM+ G
Sbjct: 192 EYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTG 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 71 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQ 124
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + + G +
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLP 180
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 181 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 93 KLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSF 146
+LG G FG+V KG + VAVK+LKN + +E + E M + + +V
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+G C E + L+ E G L++++ NR ++ + + ++ ++ G++YL
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGARGTIGYIAPEVFC 265
VH D+ N+LL KISDFGL+K E++ + + + + APE C
Sbjct: 125 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--C 179
Query: 266 RNFGGVSHKSDVYSYGMMILE 286
N+ S KSDV+S+G+++ E
Sbjct: 180 INYYKFSSKSDVWSFGVLMWE 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 25/204 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVL----KNSKVNGEEFINEVASMSKTSHVNVVSFL 147
++G G FG+VY + + + +VA+K + K S ++ I EV + K H N + +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 148 GFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEYLHR 205
G CY ++ A L+ E+ + D +++K L+ + + G +GL YLH
Sbjct: 121 G-CYLREHTAWLVMEYCLGSASDLL-------EVHKKPLQEVEIAAVTHGALQGLAYLH- 171
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV-F 264
+ ++H D+K NILL E K+ DFG A + F+ GT ++APEV
Sbjct: 172 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVIL 223
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+ G K DV+S G+ +E+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 87 TNSFSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV-NGEEFINEVASMSKTSHVNVV 144
T S + LG G FG V+K + G +A K++K + + EE NE++ M++ H N++
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
K L+ E++ G L I D ES N+ M QI GI ++H
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGI----RHMH 204
Query: 205 RGCNIRIVHFDIKPHNIL-LGEDFCP-KISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
+ + I+H D+KP NIL + D KI DFGLA+ + +E GT ++APE
Sbjct: 205 Q---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPE 258
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
V N+ VS +D++S G++ ++ G
Sbjct: 259 VV--NYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 83 VKRMTNSFSNK------LGQGGFGSVY--KGKLPDGRLVAVKVLKN----SKVNGEEFIN 130
V+ T FS++ LG+G FG V K K+ G+ AVKV+ K + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTM 189
EV + + H N++ F +K L+ E G L D+ I + S ++
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-------A 128
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESF 246
+I + G+ Y+H+ +IVH D+KP N+LL +D +I DFG LS E+
Sbjct: 129 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG---LSTHFEAS 182
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
M GT YIAPEV G K DV+S G+++ ++ G
Sbjct: 183 KKMKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 25/204 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVL----KNSKVNGEEFINEVASMSKTSHVNVVSFL 147
++G G FG+VY + + + +VA+K + K S ++ I EV + K H N + +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 148 GFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEYLHR 205
G CY ++ A L+ E+ + D +++K L+ + + G +GL YLH
Sbjct: 82 G-CYLREHTAWLVMEYCLGSASDLL-------EVHKKPLQEVEIAAVTHGALQGLAYLH- 132
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV-F 264
+ ++H D+K NILL E K+ DFG A + F+ GT ++APEV
Sbjct: 133 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVIL 184
Query: 265 CRNFGGVSHKSDVYSYGMMILEMV 288
+ G K DV+S G+ +E+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELA 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 35/224 (15%)
Query: 94 LGQGGFGSVYKGKL--PDGR----LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVS 145
LG+G FG V K GR VAVK+LK + E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN--------------------RKLE 185
G C + LI E+ GSL F+ ES + R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES 245
+ A I++G++YL +++VH D+ NIL+ E KISDFGL++ +++S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ R + ++A E + + +SDV+S+G+++ E+V
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 141 VNVVSFLGFCYEKK-KRALIYEFMPNGSLDQFIYDEESSNINRK----------LEWRTM 189
+NVV+ LG C + +I EF G+L ++ + + + K L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 CQIAVGIARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+ +A+G+E+L R C +H D+ NILL E KI DFGLA+ K +
Sbjct: 151 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 249 MLGARGTIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
AR + ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYK------GKLPDGRLVAVKVLKNSK--VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K GK + + + L +S+ V+ EE EV + + H N++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L Q I G+ YLH
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGVHYLH 125
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+ RI HFD+KP NI+L + P K+ DFG+A E F ++ GT ++A
Sbjct: 126 ---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVA 179
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 180 PEIV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 364 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 422
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELV 475
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 476 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 533 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 564
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 93 KLGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVN---GEEFINEVASMSKTSHVNVVSFLG 148
KLG G +G V + + A+K+++ + V+ + + EVA + H N++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 149 FCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F +K+ L+ E G L D+ I+ + + ++ + I + G+ YLH+
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVTYLHKH- 155
Query: 208 NIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
IVH D+KP N+LL +D KI DFGL+ + E ++ L GT YIAPEV
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---GTAYYIAPEVL 210
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
+ + K DV+S G+++ ++ G
Sbjct: 211 RKKY---DEKCDVWSIGVILFILLAG 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQ 119
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ C K+ DFGL++ E + + G +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLP 175
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYK------GKLPDGRLVAVKVLKNSK--VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K GK + + + L +S+ V+ EE EV + + H N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L Q I G+ YLH
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGVHYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
RI HFD+KP NI+L + P K+ DFG+A E F ++ GT ++A
Sbjct: 133 SK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG---KLPDGRLVAVKVLKNSKVNG---EEFINEVA 133
Y D K +T +LG G FG+V KG + VAVK+LKN + +E + E
Sbjct: 365 YLDRKLLTLE-DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 423
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
M + + +V +G C E + L+ E G L++++ NR ++ + + ++
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKDKNIIELV 476
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFI-SMLGA 252
++ G++YL VH D+ N+LL KISDFGL+K E++ +
Sbjct: 477 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILE 286
+ + + APE C N+ S KSDV+S+G+++ E
Sbjct: 534 KWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 565
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 83 VKRMTNSFSNK------LGQGGFGSVY--KGKLPDGRLVAVKVLKN----SKVNGEEFIN 130
V+ T FS++ LG+G FG V K K+ G+ AVKV+ K + E +
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 98
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTM 189
EV + + H N++ F +K L+ E G L D+ I + S ++
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-------A 151
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESF 246
+I + G+ Y+H+ +IVH D+KP N+LL +D +I DFG LS E+
Sbjct: 152 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG---LSTHFEAS 205
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
M GT YIAPEV G K DV+S G+++ ++ G
Sbjct: 206 KKMKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 246
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYKGK-LPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V K + P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + + +++ + ++++ + RGL YL
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEA------KRIPEEILGKVSIAVLRGLAYLRE--K 133
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y+APE
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMAPERLQG 187
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++E+ VGR
Sbjct: 188 THYSV--QSDIWSMGLSLVELAVGR 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKL--PD--GRLVAVKVLKNSKVNG--EEFINEVASM 135
+++R +G+G FG V++G P+ VA+K KN + E+F+ E +M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 136 SKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
+ H ++V +G E +I E G L F+ + S L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQ 119
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++ L YL + R VH DI N+L+ + C K+ DFGL++ E + G +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLP 175
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
I ++APE NF + SDV+ +G+ + E+++
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYK------GKLPDGRLVAVKVLKNSK--VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K GK + + + L +S+ V+ EE EV + + H N++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L Q I G+ YLH
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGVHYLH 146
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+ RI HFD+KP NI+L + P K+ DFG+A E F ++ GT ++A
Sbjct: 147 ---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVA 200
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 201 PEIV--NYEPLGLEADMWSIGVITYILLSG 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 33/224 (14%)
Query: 83 VKRMTNSFSNK------LGQGGFGSVY--KGKLPDGRLVAVKVLKNSKV----NGEEFIN 130
V+ T FS++ LG+G FG V K K+ G+ AVKV+ +V + E +
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 81
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTM 189
EV + + H N++ F +K L+ E G L D+ I + S ++
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-------A 134
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESF 246
+I + G+ Y+H+ +IVH D+KP N+LL +D +I DFG LS E+
Sbjct: 135 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG---LSTHFEAS 188
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
M GT YIAPEV G K DV+S G+++ ++ G
Sbjct: 189 KKMKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 36/236 (15%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV---NGEEF-INE--VASMSKTSHVNVVSF 146
+G+GGFG VY + D G++ A+K L ++ GE +NE + S+ T +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 147 LGFCYE-KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+ + + K + I + M G L Y + + + R A I GLE++H
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF---YAAEIILGLEHMH- 308
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
N +V+ D+KP NILL E +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 309 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 362
Query: 266 RNFGGVSHKS--DVYSYGMMILEMVVGR----------KNAEVKVSLSSEIYFPNS 309
+ GV++ S D +S G M+ +++ G K+ +++L+ + P+S
Sbjct: 363 K---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 415
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 83 VKRMTNSFSNK------LGQGGFGSVY--KGKLPDGRLVAVKVLKN----SKVNGEEFIN 130
V+ T FS++ LG+G FG V K K+ G+ AVKV+ K + E +
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 99
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTM 189
EV + + H N++ F +K L+ E G L D+ I + S ++
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-------A 152
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESF 246
+I + G+ Y+H+ +IVH D+KP N+LL +D +I DFG LS E+
Sbjct: 153 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG---LSTHFEAS 206
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
M GT YIAPEV G K DV+S G+++ ++ G
Sbjct: 207 KKMKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 247
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 38/244 (15%)
Query: 88 NSFS--NKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV---NGEEF-INE--VASMSKT 138
N FS +G+GGFG VY + D G++ A+K L ++ GE +NE + S+ T
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 SHVNVVSFLGFCYE-KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
+ + + + K + I + M G L Y + + + R A I
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF---YAAEII 302
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
GLE++H N +V+ D+KP NILL E +ISD GLA KK+ S+ GT G
Sbjct: 303 LGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHG 355
Query: 258 YIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGR----------KNAEVKVSLSSEIY 305
Y+APEV + GV++ S D +S G M+ +++ G K+ +++L+ +
Sbjct: 356 YMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 412
Query: 306 FPNS 309
P+S
Sbjct: 413 LPDS 416
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 38/244 (15%)
Query: 88 NSFS--NKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV---NGEEF-INE--VASMSKT 138
N FS +G+GGFG VY + D G++ A+K L ++ GE +NE + S+ T
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 SHVNVVSFLGFCYE-KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
+ + + + K + I + M G L Y + + + R A I
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF---YAAEII 302
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
GLE++H N +V+ D+KP NILL E +ISD GLA KK+ S+ GT G
Sbjct: 303 LGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHG 355
Query: 258 YIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGR----------KNAEVKVSLSSEIY 305
Y+APEV + GV++ S D +S G M+ +++ G K+ +++L+ +
Sbjct: 356 YMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 412
Query: 306 FPNS 309
P+S
Sbjct: 413 LPDS 416
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 36/236 (15%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV---NGEEF-INE--VASMSKTSHVNVVSF 146
+G+GGFG VY + D G++ A+K L ++ GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 147 LGFCYE-KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+ + + K + I + M G L Y + + + R A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF---YAAEIILGLEHMH- 309
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
N +V+ D+KP NILL E +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 310 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 363
Query: 266 RNFGGVSHKS--DVYSYGMMILEMVVGR----------KNAEVKVSLSSEIYFPNS 309
+ GV++ S D +S G M+ +++ G K+ +++L+ + P+S
Sbjct: 364 K---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 416
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 93 KLGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+ VAVK + K E + NEV M H NVV
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + R L YLH N
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIATVCLSVLRALSYLH---NQG 161
Query: 211 IVHFDIKPHNILLGEDFCPKISDFG----LAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
++H DIK +ILL D K+SDFG ++K K++ + GT ++APEV R
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISR 215
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EM+ G
Sbjct: 216 LPYGT--EVDIWSLGIMVIEMIDG 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 94 LGQGGFGSVY--KGKLPDGRLVAVKV-LKNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
LG+GGFG V+ K K+ D ++ L N ++ E+ + EV +++K H +V +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEW-----------RTMC-QIAVGIAR 198
EK + P L +I + N K +W R++C I + IA
Sbjct: 73 LEKNTTEKLQPSSPKVYL--YIQMQLCRKENLK-DWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 199 GLEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISML------- 250
+E+LH +G ++H D+KP NI D K+ DFGL ++ E ++L
Sbjct: 130 AVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 251 ---GARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
G GT Y++PE N SHK D++S G+++ E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLSFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 11 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 178
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 179 CKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 14 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 126
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 127 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 181
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 182 CKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 17 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 129
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 184
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 185 CKYY---STAVDIWSLGCIFAEMVTRR 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 35/224 (15%)
Query: 94 LGQGGFGSVYKGKL--PDGR----LVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVS 145
LG+G FG V K GR VAVK+LK + E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN--------------------RKLE 185
G C + LI E+ GSL F+ ES + R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKES 245
+ A I++G++YL + +VH D+ NIL+ E KISDFGL++ +++S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 246 FISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ R + ++A E + + +SDV+S+G+++ E+V
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 12 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 124
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 180 CKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 12 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 124
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 180 CKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 11 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 178
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 179 CKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 11 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 178
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 179 CKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 14 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 126
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 127 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 181
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 182 CKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 94 LGQGGFGSVYKGKL-PDG----RLVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSF 146
LG+G FG V + P+G VAVK LK + E+ + H N+V +
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 147 LGFCYEKKKRA--LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G C E LI EF+P+GSL +++ N N K+ + + AV I +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKN-KINLKQQLKYAVQICKGMDYLG 143
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT-IGYIAPEV 263
+ + VH D+ N+L+ + KI DFGL K E + ++ R + + + APE
Sbjct: 144 ---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVV 289
++ ++ SDV+S+G+ + E++
Sbjct: 201 LMQSKFYIA--SDVWSFGVTLHELLT 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 145 SFLGFCYEKKKRALI-YEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIAR 198
L FC++ ++ + NG L ++I +DE + I
Sbjct: 101 K-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVS 148
Query: 199 GLEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT
Sbjct: 149 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y++PE+ SD+++ G +I ++V G
Sbjct: 205 YVSPELLTEK--SACKSSDLWALGCIIYQLVAG 235
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEE--FINEVASMSKT 138
D+K++ F LG G F V + G+L AVK + + G+E NE+A + K
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 139 SHVNVVSFLGFCYEKKKRALIYEFMPNGSL------DQFIYDEESSNINRKLEWRTMCQI 192
H N+V+ L+ + + G L F ++++S + R+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ--------- 128
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISM 249
+ + YLHR + IVH D+KP N+L E+ ISDFGL+K+ K + M
Sbjct: 129 ---VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VM 179
Query: 250 LGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
A GT GY+APEV + S D +S G++ ++ G
Sbjct: 180 STACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 218
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 94 LGQGGFGSVYKGKL-PDG----RLVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSF 146
LG+G FG V + P+G VAVK LK + E+ + H N+V +
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 147 LGFCYEKKKRA--LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G C E LI EF+P+GSL +++ N N K+ + + AV I +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKN-KINLKQQLKYAVQICKGMDYLG 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT-IGYIAPEV 263
+ + VH D+ N+L+ + KI DFGL K E + ++ R + + + APE
Sbjct: 132 ---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVV 289
++ ++ SDV+S+G+ + E++
Sbjct: 189 LMQSKFYIA--SDVWSFGVTLHELLT 212
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 11 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 178
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 179 CKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 12 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 124
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 125 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 180 CKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEE----FINEVASMSKTSHVNVVSFL 147
+LG+G +G V K + +P G+++AVK ++ + VN +E ++ SM V+F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + + + E M + SLD+F ++ + + + + +IAV I + LE+LH
Sbjct: 73 GALFREGDVWICMELM-DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHS-- 127
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
+ ++H D+KP N+L+ K+ DFG++ L + I G Y+APE
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID----AGCKPYMAPERINP 183
Query: 267 --NFGGVSHKSDVYSYGMMILEMVVGR 291
N G S KSD++S G+ ++E+ + R
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAV-KVLKNSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+ K+ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAV-KVLKNSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+ K+ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 11 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 178
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 179 CKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 177
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 178 CKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 93 KLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEF------INEVASMSKTS---HVN 142
++G G +G+VYK + P G VA+K ++ G + EVA + + H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 143 VVSFLGFCYEKK-----KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
VV + C + K L++E +DQ + L T+ +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL++LH C IVH D+KP NIL+ K++DFGLA++ + + ++ T+
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV---VTLW 184
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
Y APEV ++ + D++S G + EM
Sbjct: 185 YRAPEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 12 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L F+ + I L + Q+ +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 124
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 179
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 180 CKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 185
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 239
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 240 THYSV--QSDIWSMGLSLVEMAVGR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 150
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 204
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 205 THYSV--QSDIWSMGLSLVEMAVGR 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 126 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 126
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + E F+ GT Y++PE
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------GTRSYMSPERLQG 180
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 181 THYSV--QSDIWSMGLSLVEMAVGR 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 142
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 196
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 197 THYSV--QSDIWSMGLSLVEMAVGR 219
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 84 KRMTNSFSNKLGQGGFGSVYKGKLPD---GRL-VAVKVLK--NSKVNGEEFINEVASMSK 137
+R+ +G+G FG VY G+ D R+ A+K L E F+ E M
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 138 TSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+H NV++ +G + ++ +M +G L QFI + + + L + +
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQV 133
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARG 254
ARG+EYL + VH D+ N +L E F K++DFGLA+ L + S AR
Sbjct: 134 ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+ + A E + KSDV+S+G+++ E++
Sbjct: 191 PVKWTALESL--QTYRFTTKSDVWSFGVLLWELL 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 178 THYSV--QSDIWSMGLSLVEMAVGR 200
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNGE----EFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL S++ E + E+ S H N++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ +++K+ L+ EF P G L + + +DE+ S +A L Y
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-----------ATFMEELADALHYC 131
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
H +++H DIKP N+L+G KI+DFG + + + GT+ Y+ PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM 184
Query: 264 FCRNFGGVSH--KSDVYSYGMMILEMVVG 290
G +H K D++ G++ E +VG
Sbjct: 185 ----IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNGE----EFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL S++ E + E+ S H N++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ +++K+ L+ EF P G L + + +DE+ S +A L Y
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-----------ATFMEELADALHYC 130
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
H +++H DIKP N+L+G KI+DFG + + + GT+ Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM 183
Query: 264 FCRNFGGVSH--KSDVYSYGMMILEMVVG 290
G +H K D++ G++ E +VG
Sbjct: 184 ----IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 178 THYSV--QSDIWSMGLSLVEMAVGR 200
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKVNGE----EFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + + + A+KVL S++ E + E+ S H N++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ +++K+ L+ EF P G L + + +DE+ S +A L Y
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-----------ATFMEELADALHYC 130
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
H +++H DIKP N+L+G KI+DFG + + + GT+ Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM 183
Query: 264 FCRNFGGVSH--KSDVYSYGMMILEMVVG 290
G +H K D++ G++ E +VG
Sbjct: 184 ----IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 178 THYSV--QSDIWSMGLSLVEMAVGR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 83 VKRMTNSFSNK------LGQGGFGSVY--KGKLPDGRLVAVKVLKN----SKVNGEEFIN 130
V+ T FS++ LG+G FG V K K+ G+ AVKV+ K + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTM 189
EV + + H N+ F +K L+ E G L D+ I + S ++
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-------A 128
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESF 246
+I + G+ Y H+ +IVH D+KP N+LL +D +I DFGL+ E +
Sbjct: 129 ARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ GT YIAPEV G K DV+S G+++ ++ G
Sbjct: 186 KDKI---GTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 178 THYSV--QSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 92 NKLGQGGFGSVYK-GKLPDGRLVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
++LG G G V+K P G ++A K+ L+ + I E+ + + + +V F G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
Y + ++ E M GSLDQ + +++ I ++ + ++++ + +GL YL
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQI----LGKVSIAVIKGLTYLRE--K 123
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAPEVFCR 266
+I+H D+KP NIL+ K+ DFG++ + SF+ GT Y++PE
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQG 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
V +SD++S G+ ++EM VGR
Sbjct: 178 THYSV--QSDIWSMGLSLVEMAVGR 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ S SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SASKSSDLWALGCIIYQLVAG 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 29/235 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF Y+ D + V A KV+ S + E+ E+A + +VV F G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
F + ++ E SL + + + E R + + +G++YLH N
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI---QGVQYLH---N 160
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGYIAPEVF 264
R++H D+K N+ L +D KI DFGLA E+K++ GT YIAPEV
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC------GTPNYIAPEVL 214
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN---SIYKHIEP 316
C+ G S + D++S G ++ ++VG+ E + I S+ +HI P
Sbjct: 215 CKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 10 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILL- 176
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
S D++S G + EMV R
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF Y+ D + V A KV+ S + E+ E+A + +VV F G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
F + ++ E SL + + + E R + + +G++YLH N
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI---QGVQYLH---N 144
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGYIAPEVF 264
R++H D+K N+ L +D KI DFGLA E+K+ GT YIAPEV
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------GTPNYIAPEVL 198
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN---SIYKHIEP 316
C+ G S + D++S G ++ ++VG+ E + I S+ +HI P
Sbjct: 199 CKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 251
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVLKN--SKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+LG GGFG V + D G VA+K + S N E + E+ M K +H NVVS
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 150 CYEKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+K A L E+ G L +++ E+ ++ RT+ I+ L YL
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYL 138
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H RI+H D+KP NI+L + KI D G AK ++ E + GT+ Y+A
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 192
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ + V+ D +S+G + E + G
Sbjct: 193 PELLEQKKYTVT--VDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVLKN--SKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+LG GGFG V + D G VA+K + S N E + E+ M K +H NVVS
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 150 CYEKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+K A L E+ G L +++ E+ ++ RT+ I+ L YL
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSALRYL 137
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H RI+H D+KP NI+L + KI D G AK ++ E + GT+ Y+A
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 191
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ + V+ D +S+G + E + G
Sbjct: 192 PELLEQKKYTVT--VDYWSFGTLAFECITG 219
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF Y+ D + V A KV+ S + E+ E+A + +VV F G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
F + ++ E SL + + + E R + + +G++YLH N
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI---QGVQYLH---N 160
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGYIAPEVF 264
R++H D+K N+ L +D KI DFGLA E+K+ GT YIAPEV
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------GTPNYIAPEVL 214
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN---SIYKHIEP 316
C+ G S + D++S G ++ ++VG+ E + I S+ +HI P
Sbjct: 215 CKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 17 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++EF+ + L +F+ + I L + Q+ +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 129
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILL- 183
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
S D++S G + EMV R
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 141
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 142 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 198 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 92 NKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSF 146
N LG+G F VY+ + + G VA+K++ + + NEV + H +++
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEE---SSNINRKLEWRTMCQIAVGIARGLEYL 203
+ + L+ E NG +++++ + S N R M QI G+ YL
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF----MHQIITGML----YL 128
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSEKKESFISMLGARGTIGYIAPE 262
H I+H D+ N+LL + KI+DFGLA +L E ++ GT YI+PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPE 182
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
+ R+ G+ +SDV+S G M +++GR
Sbjct: 183 IATRSAHGL--ESDVWSLGCMFYTLLIGR 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRW 207
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 208 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 120
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 121 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 177 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 142
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 143 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 199 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 119
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 120 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 176 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 35/212 (16%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 150 CYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IARG 199
F P SL++F + +++N ++ + + V I RG
Sbjct: 100 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
L+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T Y
Sbjct: 148 LKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYR 199
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
APE+ N+ + D++S G ++ E++ GR
Sbjct: 200 APEIML-NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF Y+ D + V A KV+ S + E+ E+A + +VV F G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
F + ++ E SL + + + E R + + +G++YLH N
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI---QGVQYLH---N 160
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGYIAPEVF 264
R++H D+K N+ L +D KI DFGLA E+K+ GT YIAPEV
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC------GTPNYIAPEVL 214
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN---SIYKHIEP 316
C+ G S + D++S G ++ ++VG+ E + I S+ +HI P
Sbjct: 215 CKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 122
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 123 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 179 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 208
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 121
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 122 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 178 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 207
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 267
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 324
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 325 G--PEVDIWSLGIMVIEMVDG 343
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 147
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 204
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 205 G--PEVDIWSLGIMVIEMVDG 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 145
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 202
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 203 G--PEVDIWSLGIMVIEMVDG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 193 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 141
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 142 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 198 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 126
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 127 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 183 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 145
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 146 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 202 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 184 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 107 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 207 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 193 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 208 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF--------IYDEESSNI--NRKLEWRTMCQIAVGIA 197
F P SL++F + + +NI +KL + + I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 130
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 184
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 185 PEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVV 144
+ LG G FG V GK G VAVK+L K+ + + E+ ++ H +++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
++ E++ G L F Y ++ ++ K R QI G+ +Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESRRLFQQILSGV----DYCH 133
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
R +VH D+KP N+LL KI+DFGL+ + E + + G+ Y APEV
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVI 187
Query: 265 C-RNFGGVSHKSDVYSYGMMILEMVVG 290
R + G + D++S G+++ ++ G
Sbjct: 188 SGRLYAGP--EVDIWSSGVILYALLCG 212
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 13 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++E + + L +F+ + I L + Q+ +GL + H
Sbjct: 72 DVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--- 123
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
+ R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPEILLG 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 181 CKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 193 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 136
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 193
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 194 G--PEVDIWSLGIMVIEMVDG 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV + G +AVK L S ++ + E+ + H NV+ L
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 117 DV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 216
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 217 YRAPEIML-NWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 140
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 197
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 198 G--PEVDIWSLGIMVIEMVDG 216
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 87 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 134
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 186
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 187 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 142
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 143 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 199 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 130
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 184
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 185 PEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 142
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 143 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 199 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 99 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 199 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 93 KLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHVNVVSFLGFC 150
K+G+G G V + G+LVAVK + K E + NEV M H NVV
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ ++ EF+ G+L + + ++ + + + + + L LH
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 190
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGL-AKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
++H DIK +ILL D K+SDFG A++S++ ++ GT ++APE+ R
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPY 247
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
G + D++S G+M++EMV G
Sbjct: 248 G--PEVDIWSLGIMVIEMVDG 266
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 194
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 195 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVN---GEEF-INEVASMSKTSHVNVVSFLG 148
LG+GGFG V ++ G++ A K L+ ++ GE +NE + K + VVS L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LA 250
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ YE K L+ M G L IY + E R + A I GLE LHR
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVF-YAAEICCGLEDLHRE- 305
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
RIV+ D+KP NILL + +ISD GLA + + ++ G GT+GY+APEV +N
Sbjct: 306 --RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVV-KN 359
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
+ D ++ G ++ EM+ G+
Sbjct: 360 -ERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 190 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVN---GEEF-INEVASMSKTSHVNVVSFLG 148
LG+GGFG V ++ G++ A K L+ ++ GE +NE + K + VVS L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LA 250
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ YE K L+ M G L IY + E R + A I GLE LHR
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVF-YAAEICCGLEDLHRE- 305
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
RIV+ D+KP NILL + +ISD GLA + + ++ G GT+GY+APEV +N
Sbjct: 306 --RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVV-KN 359
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
+ D ++ G ++ EM+ G+
Sbjct: 360 -ERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF--------IYDEESSNI--NRKLEWRTMCQIAVGIA 197
F P SL++F + + +NI +KL + + I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF--------IYDEESSNINR--KLEWRTMCQIAVGIA 197
F P SL++F + + +NI + KL + + I
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL 131
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 184 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 92 NKLGQGGFGSVYKGKLPDGR-LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
+++G+G FG VYKG + +VA+K+ L+ ++ E+ E+ +S+ + + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ K +I E++ GS + LE + I I +GL+YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGP-------LEETYIATILREILKGLDYLH---S 134
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEVF 264
R +H DIK N+LL E K++DFG+A +L++ K+ F+ GT ++APEV
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVI 188
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
++ K+D++S G+ +E+ G
Sbjct: 189 KQS--AYDFKADIWSLGITAIELAKG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 100 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 200 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 100 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 200 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 190 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 190 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 111 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRW 210
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 211 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRW 183
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 184 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 100 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 200 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 93 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 193 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 85 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 185 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 99 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 199 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SAXKSSDLWALGCIIYQLVAG 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 130
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LHR R++H D+K N+ L ED KI DFGLA E +L GT YIAPE
Sbjct: 131 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPE 185
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKHIEP 316
V + G S + DV+S G ++ ++VG+ E S E Y SI KHI P
Sbjct: 186 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINP 240
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 145
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 146 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 202 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 94 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 90 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 190 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 93 KLGQGGFGSVYKG--KLPDGRLVAVKVLK-NSKVNG--EEFINEVASMSKTSHVNVVSFL 147
K+G+G +G VYK KL G +VA+K ++ +++ G I E++ + + +H N+V L
Sbjct: 9 KIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ + K L++E + + L F+ + I L + Q+ +GL + H
Sbjct: 68 DVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCHSH- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF-- 264
R++H D+KP N+L+ + K++DFGLA+ ++ + T+ Y APE+
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPEILLG 176
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
C+ + S D++S G + EMV R
Sbjct: 177 CKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 84 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 184 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 144
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 145 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 201 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 45/243 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 132
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGY 258
LHR R++H D+K N+ L ED KI DFGLA E+K++ GT Y
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNY 183
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKH 313
IAPEV + G S + DV+S G ++ ++VG+ E S E Y SI KH
Sbjct: 184 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKH 239
Query: 314 IEP 316
I P
Sbjct: 240 INP 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 85 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 185 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F +V + L R A+K+L+ + E + V MS+ H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 147
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 148 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 204 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 233
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 154
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LHR R++H D+K N+ L ED KI DFGLA E +L GT YIAPE
Sbjct: 155 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPE 209
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKHIEP 316
V + G S + DV+S G ++ ++VG+ E S E Y SI KHI P
Sbjct: 210 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINP 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 45/243 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 136
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGY 258
LHR R++H D+K N+ L ED KI DFGLA E+K++ GT Y
Sbjct: 137 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNY 187
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKH 313
IAPEV + G S + DV+S G ++ ++VG+ E S E Y SI KH
Sbjct: 188 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKH 243
Query: 314 IEP 316
I P
Sbjct: 244 INP 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 107 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 207 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 26 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 86 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 133
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 185
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 186 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 90 FSNKLGQGGFGSVYKGKLPDGRLVAV-KVLKN-----SKVNGEEFINEVASMSKTSHVNV 143
F KLG G FG V+ L + R + +V+K S+V E+ E+ + H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ + ++ E G L + I ++ + L + ++ + L Y
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG--KALSEGYVAELMKQMMNALAYF 140
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYI 259
H + +VH D+KP NIL +D P KI DFGLA+L + E + A GT Y+
Sbjct: 141 H---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGTALYM 193
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
APEVF R+ V+ K D++S G+++ ++ G
Sbjct: 194 APEVFKRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 111 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 210
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 211 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 93 KLGQGGFGSVYKGKLPD----GRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---H 140
++G+G +G V+K + D GR VA+K ++ GEE I EVA + H
Sbjct: 18 EIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 141 VNVVSFLGFCY-----EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
NVV C + K L++E + D Y ++ E T+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTE--TIKDMMFQ 128
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
+ RGL++LH + R+VH D+KP NIL+ K++DFGLA++ + + S++ T
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VT 182
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
+ Y APEV ++ + D++S G + EM
Sbjct: 183 LWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 108 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 208 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 93 KLGQGGFGSVYKGKLPD----GRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---H 140
++G+G +G V+K + D GR VA+K ++ GEE I EVA + H
Sbjct: 18 EIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 141 VNVVSFLGFCY-----EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
NVV C + K L++E +DQ + + T+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-----HVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
+ RGL++LH + R+VH D+KP NIL+ K++DFGLA++ + + S++ T
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VT 182
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
+ Y APEV ++ + D++S G + EM
Sbjct: 183 LWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 93 KLGQGGFGSVYKGKLPD----GRLVAVKVLKNSKVNGEE-----FINEVASMSKTS---H 140
++G+G +G V+K + D GR VA+K ++ GEE I EVA + H
Sbjct: 18 EIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 141 VNVVSFLGFCY-----EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG 195
NVV C + K L++E + D Y ++ E T+ +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTE--TIKDMMFQ 128
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
+ RGL++LH + R+VH D+KP NIL+ K++DFGLA++ + + S++ T
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VT 182
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEM 287
+ Y APEV ++ + D++S G + EM
Sbjct: 183 LWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G +G V +L R+ VAVK+ +K + E E+ + +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 156
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LHR R++H D+K N+ L ED KI DFGLA E +L GT YIAPE
Sbjct: 157 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPE 211
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKHIEP 316
V + G S + DV+S G ++ ++VG+ E S E Y SI KHI P
Sbjct: 212 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINP 266
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 45/243 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG+GGF ++ D + V A K++ S + E+ E++ +H +VV F G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 149 FCYEKKKRALIYEFMPNGSLDQF------IYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
F + ++ E SL + + + E+ R+ I G +Y
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ------------IVLGCQY 132
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----SEKKESFISMLGARGTIGY 258
LHR R++H D+K N+ L ED KI DFGLA E+K++ GT Y
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNY 183
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF-----PNSIYKH 313
IAPEV + G S + DV+S G ++ ++VG+ E S E Y SI KH
Sbjct: 184 IAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKH 239
Query: 314 IEP 316
I P
Sbjct: 240 INP 242
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLK-NSKVNGEEFIN-----EVASMSKTSHVNVVSF 146
LG+G F +VYK + + ++VA+K +K + ++ IN E+ + + SH N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
L K +L+++FM L+ I D ++ + + +GLEYLH+
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQH 131
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVF- 264
I+H D+KP+N+LL E+ K++DFGLAK ++ + R Y APE+
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLF 185
Query: 265 -CRNFG-GVSHKSDVYSYGMMILEMVV 289
R +G GV D+++ G ++ E+++
Sbjct: 186 GARMYGVGV----DMWAVGCILAELLL 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 90 FSNKLGQGGFGS-VYKGKLPDGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVV 144
F LG+G F + V +L R A+K+L+ + E + V MS+ H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARG 199
+ +K + NG L ++I +DE + I
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----------YTAEIVSA 142
Query: 200 LEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGY 258
LEYLH +G I+H D+KP NILL ED +I+DFG AK+ + GT Y
Sbjct: 143 LEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++PE+ SD+++ G +I ++V G
Sbjct: 199 VSPELLTEK--SACKSSDLWALGCIIYQLVAG 228
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 94 LGQGGFGSVYKGKLPDGR-LVAVKVLKNSK-VNGEEFIN---EVASMSKTSHVNVVSFLG 148
+G+G FG V + D + + A+K + K V E N E+ M H +V+
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+++ ++ + + G L + N++ K E T+ + L+YL N
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEE--TVKLFICELVMALDYLQ---N 133
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF-CRN 267
RI+H D+KP NILL E I+DF +A + ++ +M G + Y+APE+F R
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK---PYMAPEMFSSRK 190
Query: 268 FGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSS 302
G S D +S G+ E++ GR+ ++ S SS
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ + + M G T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 195 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 29/207 (14%)
Query: 93 KLGQGGFGSVYKGKLPDGR---LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
K+G+G FG V+KG D R +VA+K+ L+ ++ E+ E+ +S+ V +
Sbjct: 14 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + K +I E++ GS + E ++ + I I +GL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE----TQIATILREILKGLDYLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEV 263
+ + +H DIK N+LL E K++DFG+A +L++ K+ +F+ GT ++APEV
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 175
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ K+D++S G+ +E+ G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARG 200
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 85 RMTNSFSNKLGQGGFGSVY--KGKLPDGRLVAVKVLKNSKVNGEEFI-NEVASMSKTSHV 141
R T F LG G F V+ K +L G+L A+K +K S + + NE+A + K H
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGI 196
N+V+ L+ + + G L ++ +Y E+ +++ + +
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-----------VIQQV 115
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGAR 253
++YLH IVH D+KP N+L E+ I+DFGL+K+ + M A
Sbjct: 116 LSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTAC 168
Query: 254 GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT GY+APEV + S D +S G++ ++ G
Sbjct: 169 GTPGYVAPEVLAQK--PYSKAVDCWSIGVITYILLCG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 70 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 120
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 178
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 179 RREFH--AEPVDVWSCGIVLTAMLAG 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ E+ EV+ + + H NV+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E + G L F+ ++ES L + I G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLH 131
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+++I HFD+KP NI+L + P KI DFGLA + F ++ GT ++A
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVA 185
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 186 PEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ + + M G T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 195 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 95 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ + + M G T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 195 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI D+GLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSFLG 148
++G+G +GSV K P G+++AVK ++++ E+ ++ M + +V F G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ + + E M + S D+F Y S ++ + + +I + + L +L N
Sbjct: 89 ALFREGDCWICMELM-STSFDKF-YKYVYSVLDDVIPEEILGKITLATVKALNHLKE--N 144
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
++I+H DIKP NILL K+ DFG +S + I+ G Y+APE +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 269 G--GVSHKSDVYSYGMMILEMVVGR 291
G +SDV+S G+ + E+ GR
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 93 KLGQGGFGSVYKGKLPDGR---LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
K+G+G FG V+KG D R +VA+K+ L+ ++ E+ E+ +S+ V +
Sbjct: 34 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + K +I E++ GS + E ++ + I I +GL+YLH
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE----TQIATILREILKGLDYLHSE- 143
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEV 263
+ +H DIK N+LL E K++DFG+A +L++ K+ +F+ GT ++APEV
Sbjct: 144 --KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 195
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ K+D++S G+ +E+ G
Sbjct: 196 IKQS--AYDSKADIWSLGITAIELARG 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF--------IYDEESSNI--NRKLEWRTMCQIAVGIA 197
F P SL++F + + +NI ++KL + + I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGL + ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G +G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 180
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 181 RREFH--AEPVDVWSCGIVLTAMLAG 204
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 93 KLGQGGFGSVYKGKLPDGR---LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
K+G+G FG V+KG D R +VA+K+ L+ ++ E+ E+ +S+ V +
Sbjct: 29 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + K +I E++ GS + E ++ + I I +GL+YLH
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE----TQIATILREILKGLDYLH--- 136
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEV 263
+ + +H DIK N+LL E K++DFG+A +L++ K+ F+ GT ++APEV
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEV 190
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ K+D++S G+ +E+ G
Sbjct: 191 IKQS--AYDSKADIWSLGITAIELARG 215
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ EE EV+ + + H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 94 LGQGGFGSVYKGKLPDGRLV----AVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSF 146
LG+G FG V K K R+ AVKV+ + ++ + EV + K H N++
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEYLHR 205
+ ++ E G L +DE I RK +I + G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGEL----FDE---IIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
IVH D+KP NILL +D KI DFGL+ ++ M GT YIAPE
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPE 193
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN--SIYKHIEPGN-E 319
V G K DV+S G+++ ++ G + Y N I K +E G
Sbjct: 194 VL---RGTYDEKCDVWSAGVILYILLSG----------TPPFYGKNEYDILKRVETGKYA 240
Query: 320 FQLAG--VVTEEEKEMAKKMI 338
F L ++++ K++ +KM+
Sbjct: 241 FDLPQWRTISDDAKDLIRKML 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ EE EV+ + + H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ EE EV+ + + H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 93 KLGQGGFGSVYKGKLPDGR---LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
K+G+G FG V+KG D R +VA+K+ L+ ++ E+ E+ +S+ V +
Sbjct: 14 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + K +I E++ GS + E ++ + I I +GL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE----TQIATILREILKGLDYLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYIAPEV 263
+ + +H DIK N+LL E K++DFG+A +L++ K+ F+ GT ++APEV
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEV 175
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ K+D++S G+ +E+ G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARG 200
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ EE EV+ + + H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 28/206 (13%)
Query: 94 LGQGGFGSVYKGKLPDGR-LVAVKVLKNSKVNGE----EFINEVASMSKTSHVNVVSFLG 148
LG+G FG+VY + +VA+KVL S++ E + E+ + H N++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ Y++++ LI E+ P G L + + ++S + E RT I +A L Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL--QKSCTFD---EQRT-ATIMEELADALMYCH---G 141
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA--KLSEKKESFISMLGARGTIGYIAPEVFCR 266
+++H DIKP N+LLG KI+DFG + S ++++ GT+ Y+ PE+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC------GTLDYLPPEM--- 192
Query: 267 NFGGVSH--KSDVYSYGMMILEMVVG 290
G H K D++ G++ E++VG
Sbjct: 193 -IEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V EE EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI DF LA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSK-------VNGEEFINEVASMSKTSHVNVV 144
+LG G F V K + G A K +K + V+ EE EV+ + + H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ + LI E + G L F+ +ES L I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLH 132
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIA 260
+I HFD+KP NI+L + P K+ DFGLA E F ++ GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE+ N+ + ++D++S G++ ++ G
Sbjct: 187 PEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 37/211 (17%)
Query: 93 KLGQGGFGSVYKGKLPDGR---LVAVKV--LKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
++G+G FG V+KG D R +VA+K+ L+ ++ E+ E+ +S+ V +
Sbjct: 30 RIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFI----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
G + K +I E++ GS + +DE + TM + I +GL+YL
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE--------FQIATMLK---EILKGLDYL 136
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLA-KLSE---KKESFISMLGARGTIGYI 259
H + + +H DIK N+LL E K++DFG+A +L++ K+ +F+ GT ++
Sbjct: 137 H---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV------GTPFWM 187
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
APEV ++ K+D++S G+ +E+ G
Sbjct: 188 APEVIQQS--AYDSKADIWSLGITAIELAKG 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V+ + +GR A+KVLK V E +E +S +H ++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEES-SNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ ++ +I +++ G L + + N K A + LEYLH
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAEVCLALEYLHSK- 125
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
I++ D+KP NILL ++ KI+DFG AK + GT YIAPEV
Sbjct: 126 --DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTK 178
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
+ D +S+G++I EM+ G
Sbjct: 179 --PYNKSIDWWSFGILIYEMLAG 199
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL----VAVKVLKNSK-VNGEEFINEVASMSKT-SHVNVVSFL 147
LG+G G V +L R+ VAVK++ + V+ E I + ++K +H NVV F
Sbjct: 14 LGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G E + L E+ G L F E + R Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 121
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKL--SEKKESFISMLGARGTIGYIAPEVFC 265
I I H DIKP N+LL E KISDFGLA + +E ++ + GT+ Y+APE+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLK 179
Query: 266 -RNFGGVSHKSDVYSYGMMILEMVVG 290
R F + DV+S G+++ M+ G
Sbjct: 180 RREFH--AEPVDVWSCGIVLTAMLAG 203
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G +GSV D RL VAVK L S ++ E+ + H NV+ L
Sbjct: 28 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQ-----IAVGIA 197
F P S++ F + +++N ++ + + + +
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED +I DFGLA+ ++++ M G T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRW 185
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ G+
Sbjct: 186 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVN---GEEFINEVASMSKTSHVNVVSFLGF 149
K+G+G +G VYK + G A+K ++ K + I E++ + + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---DR 119
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLAK---LSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H D+KP N+L+ + KI+DFGLA+ + +K + + T+ Y AP+V
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMG 174
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ S D++S G + EMV G
Sbjct: 175 S-KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVN---GEEFINEVASMSKTSHVNVVSFLGF 149
K+G+G +G VYK + G A+K ++ K + I E++ + + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---DR 119
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLAK---LSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H D+KP N+L+ + KI+DFGLA+ + +K + + T+ Y AP+V
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMG 174
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ S D++S G + EMV G
Sbjct: 175 S-KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI D GLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVN---GEEFINEVASMSKTSHVNVVSFLGF 149
K+G+G +G VYK + G A+K ++ K + I E++ + + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---DR 119
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLAK---LSEKKESFISMLGARGTIGYIAPEVFCR 266
R++H D+KP N+L+ + KI+DFGLA+ + +K + + T+ Y AP+V
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMG 174
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ S D++S G + EMV G
Sbjct: 175 S-KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 33/272 (12%)
Query: 89 SFSNKLGQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVS 145
+F KL + G ++KG+ G + VKVLK S +F E + SH NV+
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 146 FLGFCYEKKK--RALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
LG C LI +MP GSL Y+ N ++ + A+ +ARG+ +L
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSL----YNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
H I + ++++ ED +IS +++ K SF S G ++APE
Sbjct: 128 H-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSP-GRMYAPAWVAPEA 179
Query: 264 FCRNFGGVSHKS-DVYSYGMMILEMVV------GRKNAEVKVSLSSE---IYFPNSIYKH 313
+ + +S D++S+ +++ E+V N E+ + ++ E P I H
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH 239
Query: 314 IEPGNEFQLAGVVTEEEKEMAKKMILVLEMLE 345
+ +L + E+ K +++ +LE
Sbjct: 240 VS-----KLMKICMNEDPAKRPKFDMIVPILE 266
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 94 LGQGGFGSVYKGKLPDGRLV----AVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSF 146
LG+G FG V K K R+ AVKV+ + ++ + EV + K H N++
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEYLHR 205
+ ++ E G L +DE I RK +I + G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGEL----FDE---IIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
IVH D+KP NILL +D KI DFGL+ ++ M GT YIAPE
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPE 193
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN--SIYKHIEPGN-E 319
V G K DV+S G+++ ++ G + Y N I K +E G
Sbjct: 194 VL---RGTYDEKCDVWSAGVILYILLSG----------TPPFYGKNEYDILKRVETGKYA 240
Query: 320 FQLAG--VVTEEEKEMAKKMI 338
F L ++++ K++ +KM+
Sbjct: 241 FDLPQWRTISDDAKDLIRKML 261
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 94 LGQGGFGSVYKGK----LPDGRLVAVKVLKNSKV--NGEEFINEVAS---MSKTSHVNVV 144
LG+GG+G V++ + G++ A+KVLK + + N ++ + A + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E++ G L F+ E T C I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMED----TACFYLAEISMALGHLH 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ I++ D+KP NI+L K++DFGL K S + GTI Y+APE+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--GTIEYMAPEIL 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
R+ G + D +S G ++ +M+ G
Sbjct: 194 MRS--GHNRAVDWWSLGALMYDMLTG 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI FGLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 42/236 (17%)
Query: 90 FSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKN----SKVNGEEFINEVASMSKTSHVNVV 144
S+ LGQG +V++G+ G L A+KV N V+ + + E + K +H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIV 70
Query: 145 SFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNIN--RKLEWRTMCQIAVGIARGL 200
E R LI EF P GSL + EE SN + E+ + + VG G+
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVG---GM 125
Query: 201 EYLHRGCNIRIVHFDIKPHNIL--LGED--FCPKISDFGLAKLSEKKESFISMLGARGTI 256
+L IVH +IKP NI+ +GED K++DFG A+ E E F+S+ GT
Sbjct: 126 NHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTE 179
Query: 257 GYIAPEVFCRNFGGVSHKS------DVYSYGMMILEMVVG----------RKNAEV 296
Y+ P+++ R H+ D++S G+ G R+N EV
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 94 LGQGGFGSVYKGKLPDGRLV----AVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSF 146
LG+G FG V K K R+ AVKV+ + ++ + EV + K H N++
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEYLHR 205
+ ++ E G L +DE I RK +I + G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGEL----FDE---IIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
IVH D+KP NILL +D KI DFGL+ ++ M GT YIAPE
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPE 193
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPN--SIYKHIEPGN-E 319
V G K DV+S G+++ ++ G + Y N I K +E G
Sbjct: 194 VL---RGTYDEKCDVWSAGVILYILLSG----------TPPFYGKNEYDILKRVETGKYA 240
Query: 320 FQLAG--VVTEEEKEMAKKMI 338
F L ++++ K++ +KM+
Sbjct: 241 FDLPQWRTISDDAKDLIRKML 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G +GSV D RL VAVK L S ++ E+ + H NV+ L
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQ-----IAVGIA 197
F P S++ F + +++N ++ + + + +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED +I DFGLA+ ++++ M G T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ G+
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI D GLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 94 LGQGGFGSVYKGK----LPDGRLVAVKVLKNSKV--NGEEFINEVAS---MSKTSHVNVV 144
LG+GG+G V++ + G++ A+KVLK + + N ++ + A + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
+ K LI E++ G L F+ E T C I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMED----TACFYLAEISMALGHLH 138
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
+ I++ D+KP NI+L K++DFGL K S + GTI Y+APE+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--GTIEYMAPEIL 193
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
R+ G + D +S G ++ +M+ G
Sbjct: 194 MRS--GHNRAVDWWSLGALMYDMLTG 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 89 SFSNK--LGQGGFGS-VYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTS--HVNV 143
SF K LG G G+ VY+G D R VAVK + + F + + + S H NV
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFS---FADREVQLLRESDEHPNV 80
Query: 144 VSFLGFCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ + FC EK ++ I + +L +++ ++ +++ LE T+ Q GL +
Sbjct: 81 IRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLG--LEPITLLQQTTS---GLAH 133
Query: 203 LHRGCNIRIVHFDIKPHNILLGED-----FCPKISDFGLA-KLSEKKESFISMLGARGTI 256
LH ++ IVH D+KPHNIL+ ISDFGL KL+ + SF G GT
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 257 GYIAPEVFCRNFG-GVSHKSDVYSYGMM 283
G+IAPE+ + ++ D++S G +
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCV 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+G G +GSV D RL VAVK L S ++ E+ + H NV+ L
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQ-----IAVGIA 197
F P S++ F + +++N ++ + + + +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED +I DFGLA+ ++++ M G T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRW 193
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ G+
Sbjct: 194 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 48 GFGRFRKKNTENENAEAAFIRNYVSLAPKRYNY-SDVKRMTNSFSNKLGQGGFGSVYKGK 106
G + ++ E E+ E + L P Y Y +V MT+ +LG+G FG V++ K
Sbjct: 37 GSAKLQRLGPETEDNEGVLLTE--KLKPVDYEYREEVHWMTHQ--PRLGRGSFGEVHRMK 92
Query: 107 -LPDGRLVAVKVLKNSKVNGEEF-INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMP 164
G AVK KV E F + E+ + + S +V G E + E +
Sbjct: 93 DKQTGFQCAVK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 165 NGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA-RGLEYLHRGCNIRIVHFDIKPHNILL 223
GSL Q I +R L + +G A GLEYLH RI+H D+K N+LL
Sbjct: 148 GGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLH---TRRILHGDVKADNVLL 197
Query: 224 GEDFC-PKISDFGLAKLSEKKESFISMLGA---RGTIGYIAPEVFCRNFGGVSHKSDVYS 279
D + DFG A + S+L GT ++APEV K D++S
Sbjct: 198 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWS 255
Query: 280 YGMMILEMVVG 290
M+L M+ G
Sbjct: 256 SCCMMLHMLNG 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + GR VA+K++ +++N ++ EV M +H N+V
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K LI E+ G + F Y + K QI + +Y H+
Sbjct: 80 IETEKTLYLIMEYASGGEV--FDYLVAHGRMKEKEARSKFRQIVSAV----QYCHQK--- 130
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
RIVH D+K N+LL D KI+DFG + + K ++F G+ Y APE+F
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC------GSPPYAAPELFQG 184
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 185 KKYDG--PEVDVWSLGVILYTLVSG 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 92 NKLGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFL 147
+ +G G +GSV G VAVK L S ++ + E+ + H NV+ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 148 GFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQIAVG-----IA 197
F P SL++F + +++N ++ + + V I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG 257
RGL+Y+H I+H D+KP N+ + ED KI D GLA+ ++ + M G T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRW 187
Query: 258 YIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APE+ N+ + D++S G ++ E++ GR
Sbjct: 188 YRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 89 SFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKVNGEEFIN---------EVASMSKT 138
S + LG G FG V+ + + V VK +K KV + +I E+A +S+
Sbjct: 27 STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86
Query: 139 SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQI--AVGI 196
H N++ L + L+ E +G LD F + + ++ L Q+ AVG
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
R + +HR DIK NI++ EDF K+ DFG A E+ + F + GTI
Sbjct: 146 LRLKDIIHR---------DIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTI 193
Query: 257 GYIAPEVFCRN-FGGVSHKSDVYSYGMMILEMVVGRKN-AEVKVSLSSEIYFPNSIYKHI 314
Y APEV N + G + +++S G+ + +V E++ ++ + I+ P + K +
Sbjct: 194 EYCAPEVLMGNPYRG--PELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKEL 251
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 36/213 (16%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAV-KVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY- 151
+G G FG V++ KL + VA+ KVL++ + E+ M H NVV F Y
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYS 103
Query: 152 --EKKKRA---LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV-----GIARGLE 201
+KK L+ E++P + +Y +S KL+ +TM + + + R L
Sbjct: 104 NGDKKDEVFLNLVLEYVP-----ETVY--RASRHYAKLK-QTMPMLLIKLYMYQLLRSLA 155
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDF-CPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
Y+H +I I H DIKP N+LL K+ DFG AK+ E +S + +R Y A
Sbjct: 156 YIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRA 209
Query: 261 PEVFCRNFGGVSHKS--DVYSYGMMILEMVVGR 291
PE+ FG ++ + D++S G ++ E++ G+
Sbjct: 210 PELI---FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 80/267 (29%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTSH-VNVV 144
LG+G FG V + K P R VAVK+LK E + E+ ++ H +NVV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 145 SFLG--------------FC-------YEKKKRALIY----------------------- 160
+ LG +C Y K KR L +
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 161 -----------------EFMPNGSLDQFIYDEESSNINRK-LEWRTMCQIAVGIARGLEY 202
F + SL +E+S ++ + + + +ARG+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 203 LH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
L R C +H D+ NILL E+ KI DFGLA+ K ++ R + ++AP
Sbjct: 215 LSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP 270
Query: 262 E-VFCRNFGGVSHKSDVYSYGMMILEM 287
E +F + + S KSDV+SYG+++ E+
Sbjct: 271 ESIFDKIY---STKSDVWSYGVLLWEI 294
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 92 NKLGQGGFG-SVYKGKLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFL 147
K+G+G FG ++ DGR +K + S+++ EE EVA ++ H N+V +
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESS--NINRKLEWRTMCQIAVGIARGLEYLHR 205
E ++ ++ G L + I ++ ++ L+W V I L+++H
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH- 142
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIG---YIAPE 262
+ +I+H DIK NI L +D ++ DFG+A++ AR IG Y++PE
Sbjct: 143 --DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL-----ARACIGTPYYLSPE 195
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVV 289
+ C N ++KSD+++ G ++ E+
Sbjct: 196 I-CEN-KPYNNKSDIWALGCVLYELCT 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + GR VA+K++ +++N ++ EV M +H N+V
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K LI E+ G + F Y + K QI + +Y H+
Sbjct: 83 IETEKTLYLIMEYASGGEV--FDYLVAHGRMKEKEARSKFRQIVSAV----QYCHQK--- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
RIVH D+K N+LL D KI+DFG + + K ++F G Y APE+F
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC------GAPPYAAPELFQG 187
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 188 KKYDG--PEVDVWSLGVILYTLVSG 210
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 48 GFGRFRKKNTENENAEAAFIRNYVSLAPKRYNY-SDVKRMTNSFSNKLGQGGFGSVYKGK 106
G + ++ E E+ E + L P Y Y +V MT+ ++G+G FG V++ K
Sbjct: 39 GSAKLQRLGPETEDNEGVLLTE--KLKPVDYEYREEVHWMTHQ--PRVGRGSFGEVHRMK 94
Query: 107 -LPDGRLVAVKVLKNSKVNGEEF-INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMP 164
G AVK KV E F + E+ + + S +V G E + E +
Sbjct: 95 DKQTGFQCAVK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 165 NGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA-RGLEYLHRGCNIRIVHFDIKPHNILL 223
GSL Q I +R L + +G A GLEYLH RI+H D+K N+LL
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLH---TRRILHGDVKADNVLL 199
Query: 224 GEDFC-PKISDFGLAKLSEKKESFISMLGA---RGTIGYIAPEVFCRNFGGVSHKSDVYS 279
D + DFG A + S+L GT ++APEV K D++S
Sbjct: 200 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWS 257
Query: 280 YGMMILEMVVG 290
M+L M+ G
Sbjct: 258 SCCMMLHMLNG 268
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVN-VVSFL 147
+LG+G +G V K + +P G++ AVK ++ + VN +E + ++ +T V+F
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
G + + + E + SLD+F ++ + + + + +IAV I + LE+LH
Sbjct: 100 GALFREGDVWICXELX-DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHS-- 154
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEVFCR 266
+ ++H D+KP N+L+ K DFG++ L + I G Y APE
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA----GCKPYXAPERINP 210
Query: 267 --NFGGVSHKSDVYSYGMMILEMVVGR 291
N G S KSD++S G+ +E+ + R
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 48 GFGRFRKKNTENENAEAAFIRNYVSLAPKRYNY-SDVKRMTNSFSNKLGQGGFGSVYKGK 106
G + ++ E E+ E + L P Y Y +V MT+ ++G+G FG V++ K
Sbjct: 23 GSAKLQRLGPETEDNEGVLLTE--KLKPVDYEYREEVHWMTHQ--PRVGRGSFGEVHRMK 78
Query: 107 -LPDGRLVAVKVLKNSKVNGEEF-INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMP 164
G AVK KV E F + E+ + + S +V G E + E +
Sbjct: 79 DKQTGFQCAVK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133
Query: 165 NGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA-RGLEYLHRGCNIRIVHFDIKPHNILL 223
GSL Q I +R L + +G A GLEYLH RI+H D+K N+LL
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLH---TRRILHGDVKADNVLL 183
Query: 224 GEDFC-PKISDFGLAKLSEKKESFISMLGA---RGTIGYIAPEVFCRNFGGVSHKSDVYS 279
D + DFG A + S+L GT ++APEV K D++S
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP--CDAKVDIWS 241
Query: 280 YGMMILEMVVG 290
M+L M+ G
Sbjct: 242 SCCMMLHMLNG 252
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 39/216 (18%)
Query: 92 NKLGQGGFGSVYKGKLPDGRL---VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVS 145
+G G +G+V DGR VA+K L S++ + E+ + H NV+
Sbjct: 31 QPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 146 FLGFCYEKKKRALIYEFMPNGSLDQF-----IYDEESSNINRKLEWRTMCQ-----IAVG 195
L F P+ +LD F + +++ + ++ + + +
Sbjct: 89 LLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
+ +GL Y+H I+H D+KP N+ + ED KI DFGLA+ ++ + M G T
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVT 188
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
Y APEV N+ + D++S G ++ EM+ G+
Sbjct: 189 RWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+GGFG V+ ++ G+L A K L ++ + + E ++K +VS L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS-LA 251
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ +E K L+ M G + IY+ + N + E R + A I GLE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR- 308
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
I++ D+KP N+LL +D +ISD GLA E K G GT G++APE+
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
D ++ G+ + EM+ R
Sbjct: 365 --EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 94 LGQGGFG--SVYKGKLPD---GRLVAVKVLKNS--KVNGEEFINEVASMSKTSHVNVVSF 146
LG+G FG S+Y + G +VAVK LK + + E+ + H +++ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 147 LGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G C ++ +++L + E++P GSL ++ S + + L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLL------LFAQQICEGMAYLH 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+ +H ++ N+LL D KI DFGLAK + E E + + + APE
Sbjct: 135 ---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 190
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVV 289
C + SDV+S+G+ + E++
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+GGFG V+ ++ G+L A K L ++ + + E ++K +VS L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS-LA 251
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ +E K L+ M G + IY+ + N + E R + A I GLE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR- 308
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
I++ D+KP N+LL +D +ISD GLA E K G GT G++APE+
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
D ++ G+ + EM+ R
Sbjct: 365 --EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+GGFG V+ ++ G+L A K L ++ + + E ++K +VS L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS-LA 251
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ +E K L+ M G + IY+ + N + E R + A I GLE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR- 308
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
I++ D+KP N+LL +D +ISD GLA E K G GT G++APE+
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
D ++ G+ + EM+ R
Sbjct: 365 --EYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 42/236 (17%)
Query: 90 FSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKN----SKVNGEEFINEVASMSKTSHVNVV 144
S+ LGQG +V++G+ G L A+KV N V+ + + E + K +H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIV 70
Query: 145 SFLGFCYEKKKR--ALIYEFMPNGSLDQFIYDEESSNIN--RKLEWRTMCQIAVGIARGL 200
E R LI EF P GSL + EE SN + E+ + + VG G+
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVG---GM 125
Query: 201 EYLHRGCNIRIVHFDIKPHNIL--LGED--FCPKISDFGLAKLSEKKESFISMLGARGTI 256
+L IVH +IKP NI+ +GED K++DFG A+ E E F+ + GT
Sbjct: 126 NHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---GTE 179
Query: 257 GYIAPEVFCRNFGGVSHKS------DVYSYGMMILEMVVG----------RKNAEV 296
Y+ P+++ R H+ D++S G+ G R+N EV
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 94 LGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNG----EEFINEVASMSKTSHVNVVSFLG 148
LG+GGFG V+ ++ G+L A K L ++ + + E ++K +VS L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS-LA 251
Query: 149 FCYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
+ +E K L+ M G + IY+ + N + E R + A I GLE+LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR- 308
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
I++ D+KP N+LL +D +ISD GLA E K G GT G++APE+
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 268 FGGVSHKSDVYSYGMMILEMVVGR 291
D ++ G+ + EM+ R
Sbjct: 365 --EYDFSVDYFALGVTLYEMIAAR 386
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 31/210 (14%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVV---SFLG- 148
LG+G FG V+ + + A+K LK V ++ + +M + +++ FL
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE--CTMVEKRVLSLAWEHPFLTH 82
Query: 149 -FCYEKKKRALIY--EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH- 204
FC + K L + E++ G L +Y +S + K + A I GL++LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCH---KFDLSRATFYAAEIILGLQFLHS 136
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK---LSEKKESFISMLGARGTIGYIAP 261
+G IV+ D+K NILL +D KI+DFG+ K L + K + GT YIAP
Sbjct: 137 KG----IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-----GTPDYIAP 187
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
E+ +H D +S+G+++ EM++G+
Sbjct: 188 EILLGQ--KYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 90 FSNKLGQGGFGSVYKG---KLPD-GRL----VAVKVLKNSKVN-GEEFINEVASMSKTSH 140
F+ LGQG F ++KG ++ D G+L V +KVL + N E F + MSK SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKLEWRTMCQIAVGIARG 199
++V G C+ + L+ EF+ GSLD ++ ++ NI KLE +A +A
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE------VAKQLAWA 125
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG---ARGTI 256
+ +L ++H ++ NILL + K + KLS+ S I++L + I
Sbjct: 126 MHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERI 181
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ PE N ++ +D +S+G + E+ G
Sbjct: 182 PWVPPECI-ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSFLG 148
LG GG V+ + L D R VAVKVL+ F E + + +H +V+
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 149 FCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLEYL 203
+ ++ E++ +L ++ E R +E CQ L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALNFS 132
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
H+ I+H D+KP NIL+ K+ DFG+A+ +++ S GT Y++PE
Sbjct: 133 HQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ V +SDVYS G ++ E++ G
Sbjct: 190 QARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 94 LGQGGFG--SVYKGKLPD---GRLVAVKVLKNS--KVNGEEFINEVASMSKTSHVNVVSF 146
LG+G FG S+Y + G +VAVK LK + + E+ + H +++ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 147 LGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G C ++ +++L + E++P GSL ++ S + + L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLL------LFAQQICEGMAYLH 134
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+H ++ N+LL D KI DFGLAK + E E + + + APE
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 190
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVV 289
C + SDV+S+G+ + E++
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFIN----EVASMSKTSHVNVV 144
+ LG G FG V G+ G VAVK+L K+ + + E+ ++ H +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
++ E++ G L +I ++E R + Q I ++Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARRLFQ---QILSAVDYCH 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
R +VH D+KP N+LL KI+DFGL+ + E + + G+ Y APEV
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVI 182
Query: 265 C-RNFGGVSHKSDVYSYGMMILEMVVG 290
R + G + D++S G+++ ++ G
Sbjct: 183 SGRLYAGP--EVDIWSCGVILYALLCG 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKN----SKVNGEEFINEVASMSKTSHVNVVSFLG 148
+G+G FG V + R V A+K+L + + F E M+ + VV
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ + ++ E+MP G L + SN + +W V +A L+ +H +
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH---S 186
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+KP N+LL + K++DFG + KE + A GT YI+PEV ++
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL-KSQ 244
Query: 269 GGVSH---KSDVYSYGMMILEMVVG 290
GG + + D +S G+ + EM+VG
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKN----SKVNGEEFINEVASMSKTSHVNVVSFLG 148
+G+G FG V + R V A+K+L + + F E M+ + VV
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ + ++ E+MP G L + SN + +W V +A L+ +H +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH---S 191
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+KP N+LL + K++DFG + KE + A GT YI+PEV ++
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL-KSQ 249
Query: 269 GGVSH---KSDVYSYGMMILEMVVG 290
GG + + D +S G+ + EM+VG
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKN----SKVNGEEFINEVASMSKTSHVNVVSFLG 148
+G+G FG V + R V A+K+L + + F E M+ + VV
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ + ++ E+MP G L + SN + +W V +A L+ +H +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH---S 191
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +H D+KP N+LL + K++DFG + KE + A GT YI+PEV ++
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL-KSQ 249
Query: 269 GGVSH---KSDVYSYGMMILEMVVG 290
GG + + D +S G+ + EM+VG
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 90 FSNKLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFIN----EVASMSKTSHVNVV 144
+ LG G FG V G+ G VAVK+L K+ + + E+ ++ H +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 145 SFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
++ E++ G L +I ++E R + Q I ++Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARRLFQ---QILSAVDYCH 128
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF 264
R +VH D+KP N+LL KI+DFGL+ + E + + G+ Y APEV
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVI 182
Query: 265 C-RNFGGVSHKSDVYSYGMMILEMVVG 290
R + G + D++S G+++ ++ G
Sbjct: 183 SGRLYAGP--EVDIWSCGVILYALLCG 207
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 114 AVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL----- 168
AVKV+ SK + E I + + H N+++ + K L+ E M G L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 169 -DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---- 223
+F + E+S + I + +EYLH + +VH D+KP NIL
Sbjct: 114 RQKFFSEREASFVLHT------------IGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMM 283
G C +I DFG AK + ++ T ++APEV R G D++S G++
Sbjct: 159 GNPECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGIL 214
Query: 284 ILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG----VVTEEEKEMAKKMIL 339
+ M+ G S + P I I G +F L+G V+E K++ KM+
Sbjct: 215 LYTMLAGYTPFANGPSDT-----PEEILTRIGSG-KFTLSGGNWNTVSETAKDLVSKMLH 268
Query: 340 V 340
V
Sbjct: 269 V 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSFLG 148
LG GG V+ + L D R VAVKVL+ F E + + +H +V+
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 149 FCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLEYL 203
+ ++ E++ +L ++ E R +E CQ L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALNFS 132
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
H+ I+H D+KP NI++ K+ DFG+A+ +++ S GT Y++PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ V +SDVYS G ++ E++ G
Sbjct: 190 QARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 37/213 (17%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVV---SFLG- 148
LG+G FG V+ + + A+K LK V ++ + +M + +++ FL
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE--CTMVEKRVLSLAWEHPFLTH 83
Query: 149 -FCYEKKKRALIY--EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH- 204
FC + K L + E++ G L +Y +S + K + A I GL++LH
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCH---KFDLSRATFYAAEIILGLQFLHS 137
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR------GTIGY 258
+G IV+ D+K NILL +D KI+DFG+ K +MLG GT Y
Sbjct: 138 KG----IVYRDLKLDNILLDKDGHIKIADFGMCK--------ENMLGDAKTNEFCGTPDY 185
Query: 259 IAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
IAPE+ +H D +S+G+++ EM++G+
Sbjct: 186 IAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 31/249 (12%)
Query: 51 RFRKKNTENENAEAAFIRNYVSLAPKRYNY-SDVKRMTNSFSNKLGQGGFGSVYKGKLPD 109
R R+ + + E+ E + L P Y Y +V T+ +LG+G FG V++ + D
Sbjct: 61 RSREPSPKTEDNEGVLLTE--KLKPVDYEYREEVHWATHQL--RLGRGSFGEVHR--MED 114
Query: 110 ---GRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNG 166
G AVK ++ EE + + + + +V G E + E + G
Sbjct: 115 KQTGFQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 170
Query: 167 SLDQFIYDEESSNINRKLEWRTMCQIAVGIA-RGLEYLHRGCNIRIVHFDIKPHNILLGE 225
SL Q + ++ +R L + +G A GLEYLH + RI+H D+K N+LL
Sbjct: 171 SLGQLVKEQGCLPEDRALYY-------LGQALEGLEYLH---SRRILHGDVKADNVLLSS 220
Query: 226 DFC-PKISDFGLAKLSEKKESFISMLGA---RGTIGYIAPEVFCRNFGGVSHKSDVYSYG 281
D + DFG A + S+L GT ++APEV K DV+S
Sbjct: 221 DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSC 278
Query: 282 MMILEMVVG 290
M+L M+ G
Sbjct: 279 CMMLHMLNG 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 94 LGQGGFG--SVYKGKLPD---GRLVAVKVLKNS--KVNGEEFINEVASMSKTSHVNVVSF 146
LG+G FG S+Y + G +VAVK LK + + E+ + H +++ +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 147 LGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
G C + +L + E++P GSL ++ S + + L A I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLL------LFAQQICEGMAYLH 151
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPEV 263
+H D+ N+LL D KI DFGLAK + E E + + + APE
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE- 207
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVV 289
C + SDV+S+G+ + E++
Sbjct: 208 -CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 114 AVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL----- 168
AVKV+ SK + E I + + H N+++ + K L+ E M G L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 169 -DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL---- 223
+F + E+S + I + +EYLH + +VH D+KP NIL
Sbjct: 114 RQKFFSEREASFVLHT------------IGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMM 283
G C +I DFG AK + ++ T ++APEV R G D++S G++
Sbjct: 159 GNPECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGIL 214
Query: 284 ILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG----VVTEEEKEMAKKMIL 339
+ M+ G S + P I I G +F L+G V+E K++ KM+
Sbjct: 215 LYTMLAGYTPFANGPSDT-----PEEILTRIGSG-KFTLSGGNWNTVSETAKDLVSKMLH 268
Query: 340 V 340
V
Sbjct: 269 V 269
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSFLG 148
LG GG V+ + L D R VAVKVL+ F E + + +H +V+
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 149 FCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLEYL 203
+ ++ E++ +L ++ E R +E CQ L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALNFS 132
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAPE 262
H+ I+H D+KP NI++ K+ DFG+A+ +++ S GT Y++PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ V +SDVYS G ++ E++ G
Sbjct: 190 QARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + GR VAVK++ +++N ++ EV M +H N+V
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 83 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKY-- 134
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + + K ++F G+ Y APE+F
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC------GSPPYAAPELFQG 187
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 188 KKYDG--PEVDVWSLGVILYTLVSG 210
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 126 EEFINEVASMSKTSHVNVVSFLGFCYEKKKRAL--IYEFMPNGSLDQFIYDEESSNINRK 183
E+ E+A + K H NVV + + + L ++E + G + + + S +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 184 LEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKK 243
++ + +G+EYLH +I+H DIKP N+L+GED KI+DFG++ +
Sbjct: 141 FYFQDLI-------KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 244 ESFISMLGARGTIGYIAPEVFCRNFGGVSHKS-DVYSYGMMILEMVVGR 291
++ +S GT ++APE S K+ DV++ G+ + V G+
Sbjct: 191 DALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G G +GSV G VA+K L S++ + E+ + H NV+ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 150 CYEKKKRALIYEF---MPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
Y+F MP F+ + + K + + + +GL+Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMP------FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+VH D+KP N+ + ED KI DFGLA+ ++ + M G T Y APEV
Sbjct: 146 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL- 196
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
++ + D++S G ++ EM+ G+
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 126 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTG 182
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 183 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 126 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 182
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 183 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 126 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 182
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 183 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 74 APKRYNYSDVKRMTNS----FSNKLGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEE 127
AP D+ M +S F +G G FG + + KL LVAVK ++ E
Sbjct: 4 APVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDEN 62
Query: 128 FINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLE 185
E+ + H N+V F A+I E+ G L + I N R + E
Sbjct: 63 VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-----CNAGRFSEDE 117
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKK 243
R Q + G+ Y H +++I H D+K N LL P KI DFG +K S
Sbjct: 118 ARFFFQ---QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171
Query: 244 ESFISMLGARGTIGYIAPEVFCRN-FGGVSHKSDVYSYGMMILEMVVG 290
S + GT YIAPEV R + G +DV+S G+ + M+VG
Sbjct: 172 SQPKSTV---GTPAYIAPEVLLRQEYDG--KIADVWSCGVTLYVMLVG 214
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 94 LGQGGFG--SVYKGKLPD---GRLVAVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
LG+G FG S+Y + G +VAVK LK G + + E+ + H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLYHEHIV 73
Query: 145 SFLGFCYEKKKRA--LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ G C ++ +++ L+ E++P GSL ++ + + L A I G+ Y
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLL------LFAQQICEGMAY 126
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAP 261
LH +H + N+LL D KI DFGLAK + E E + + + AP
Sbjct: 127 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 262 EVF--CRNFGGVSHKSDVYSYGMMILEMVV 289
E C+ + + SDV+S+G+ + E++
Sbjct: 184 ECLKECKFY----YASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 94 LGQGGFG--SVYKGKLPD---GRLVAVKVLKNSKVNGEE----FINEVASMSKTSHVNVV 144
LG+G FG S+Y + G +VAVK LK G + + E+ + H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLYHEHIV 74
Query: 145 SFLGFCYEKKKRA--LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ G C ++ +++ L+ E++P GSL ++ + + L A I G+ Y
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLL------LFAQQICEGMAY 127
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIAP 261
LH +H + N+LL D KI DFGLAK + E E + + + AP
Sbjct: 128 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 262 EVF--CRNFGGVSHKSDVYSYGMMILEMVV 289
E C+ + + SDV+S+G+ + E++
Sbjct: 185 ECLKECKFY----YASDVWSFGVTLYELLT 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 43/271 (15%)
Query: 82 DVKRMTNSFS--NKLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK- 137
D K N F LG+G FG V + GR A+K+L+ + ++ + + S+
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 138 ---TSHVNVVSFLGFCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRT 188
T H ++ L + ++ R + E+ G L + ++ EE +
Sbjct: 64 LQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------- 114
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
I LEYLH + +V+ DIK N++L +D KI+DFGL K E +
Sbjct: 115 ---YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGAT 166
Query: 249 MLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLS 301
M GT Y+APEV N G D + G+++ EM+ GR ++ E ++ L
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYG--RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224
Query: 302 SEIYFPNSIYKHIEPGNEFQLAGVVTEEEKE 332
EI FP + + P + LAG++ ++ K+
Sbjct: 225 EEIRFPRT----LSPEAKSLLAGLLKKDPKQ 251
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAVK++ +++N ++ EV M +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKF-- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K ++F G+ Y APE+F
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELFQG 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 187 KKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAVK++ +++N ++ EV M +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKF-- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K ++F G+ Y APE+F
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELFQG 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 187 KKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 90 FSNKLGQGGFGSVYKG---KLPD-GRL----VAVKVLKNSKVN-GEEFINEVASMSKTSH 140
F+ LGQG F ++KG ++ D G+L V +KVL + N E F + MSK SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 141 VNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESS-NINRKLEWRTMCQIAVGIARG 199
++V G C + L+ EF+ GSLD ++ ++ NI KLE +A +A
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE------VAKQLAAA 125
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG---ARGTI 256
+ +L ++H ++ NILL + K + KLS+ S I++L + I
Sbjct: 126 MHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERI 181
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
++ PE N ++ +D +S+G + E+ G
Sbjct: 182 PWVPPECI-ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 126 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 182
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 183 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLXEXVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 131 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 188 FLXEXVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 124 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 181 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 134 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 190
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 191 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 126 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 182
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 183 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 120
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPE 175
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 176 VLEDNDYG--RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 229
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 230 PEAKSLLAGLLKKDPKQ 246
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 128 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 184
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 185 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 90 FSNKLGQGGFGSVYKGKLPDGRL-VAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVS 145
F ++G+G F +VYKG + + VA L++ K+ E F E + H N+V
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 146 FLGFCYE-----KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGL 200
F +E KK L+ E +G+L ++ + I W C+ I +GL
Sbjct: 90 FYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW---CR---QILKGL 142
Query: 201 EYLHRGCNIRIVHFDIKPHNILL-GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
++LH I+H D+K NI + G KI D GLA L K+ SF + GT +
Sbjct: 143 QFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAV--IGTPEFX 197
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVV 289
APE + + DVY++G LE
Sbjct: 198 APEXYEEKY---DESVDVYAFGXCXLEXAT 224
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 74
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 123
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 124 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPE 178
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 179 VLEDNDYG--RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 232
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 233 PEAKSLLAGLLKKDPKQ 249
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 128 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 184
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 185 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 120
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPE 175
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G + D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 176 VLEDNDYGRA--VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 229
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 230 PEAKSLLAGLLKKDPKQ 246
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 131 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 188 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 132 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 188
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 189 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 123 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 179
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 180 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 124 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 181 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 146 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 202
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 203 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 120
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPE 175
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 176 VLEDNDYG--RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 229
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 230 PEAKSLLAGLLKKDPKQ 246
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 187 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAVK++ +++N ++ EV M +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKF-- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K ++F G Y APE+F
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC------GAPPYAAPELFQG 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 187 KKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 120
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPE 175
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G + D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 176 VLEDNDYGRA--VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 229
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 230 PEAKSLLAGLLKKDPKQ 246
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+L+ KI DFGLA++++ +
Sbjct: 146 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 203 FLTEXVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAVK++ +++N ++ EV M +H N+V
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + ++ + ++ E R + I ++Y H+
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLV---AHGWMKEKEARAKFR---QIVSAVQYCHQKF-- 126
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K ++F G+ Y APE+F
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELFQG 179
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 180 KKYDG--PEVDVWSLGVILYTLVSG 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 41/257 (15%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSK----TSHVNVVSFLG 148
LG+G FG V + GR A+K+L+ + ++ + + S+ T H ++ L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALK 71
Query: 149 FCYEKKKR-ALIYEFMPNGSL-----DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEY 202
+ ++ R + E+ G L + ++ EE + I LEY
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----------YGAEIVSALEY 120
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH + +V+ DIK N++L +D KI+DFGL K E +M GT Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPE 175
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIE 315
V N G D + G+++ EM+ GR ++ E ++ L EI FP + +
Sbjct: 176 VLEDNDYG--RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LS 229
Query: 316 PGNEFQLAGVVTEEEKE 332
P + LAG++ ++ K+
Sbjct: 230 PEAKSLLAGLLKKDPKQ 246
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 128 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTG 184
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 185 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
+C I RGL+Y+H ++H D+KP N+LL KI DFGLA++++
Sbjct: 146 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 202
Query: 249 MLGAR-GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
L T Y APE+ N G + D++S G ++ EM+ R
Sbjct: 203 FLTEYVATRWYRAPEIML-NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 38 KKTENDQNDFGFGRFRKKNTENENAEAAFIRNYVSLAPKRYNYSDVKRMTNSFS--NKLG 95
KK E ++ DF G ++N AE VSLA ++ + N F LG
Sbjct: 114 KKQEEEEMDFRSG----SPSDNSGAEEM----EVSLAKPKHRVT-----MNEFEYLKLLG 160
Query: 96 QGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT---SHVNVVSFLGFCY 151
+G FG V K GR A+K+LK + ++ + + ++ S ++ L + +
Sbjct: 161 KGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF 220
Query: 152 EKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ R + E+ G L + E + +R + I L+YLH N+
Sbjct: 221 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSALDYLHSEKNV- 273
Query: 211 IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGG 270
V+ D+K N++L +D KI+DFGL K E + +M GT Y+APEV N G
Sbjct: 274 -VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYG 330
Query: 271 VSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIEPGNEFQLA 323
+ D + G+++ EM+ GR ++ E ++ L EI FP + + P + L+
Sbjct: 331 RA--VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLS 384
Query: 324 GVVTEEEKE 332
G++ ++ K+
Sbjct: 385 GLLKKDPKQ 393
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAV+++ +++N ++ EV M +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKF-- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K ++F G+ Y APE+F
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELFQG 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 187 KKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 31/249 (12%)
Query: 51 RFRKKNTENENAEAAFIRNYVSLAPKRYNY-SDVKRMTNSFSNKLGQGGFGSVYKGKLPD 109
R R+ + + E+ E + L P Y Y +V T+ +LG+G FG V++ + D
Sbjct: 42 RSREPSPKTEDNEGVLLTE--KLKPVDYEYREEVHWATHQL--RLGRGSFGEVHR--MED 95
Query: 110 ---GRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNG 166
G AVK ++ EE + + + + +V G E + E + G
Sbjct: 96 KQTGFQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 151
Query: 167 SLDQFIYDEESSNINRKLEWRTMCQIAVGIA-RGLEYLHRGCNIRIVHFDIKPHNILLGE 225
SL Q + ++ +R L + +G A GLEYLH + RI+H D+K N+LL
Sbjct: 152 SLGQLVKEQGCLPEDRALYY-------LGQALEGLEYLH---SRRILHGDVKADNVLLSS 201
Query: 226 DFC-PKISDFGLAKLSEKKESFISMLGA---RGTIGYIAPEVFCRNFGGVSHKSDVYSYG 281
D + DFG A + +L GT ++APEV K DV+S
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSC 259
Query: 282 MMILEMVVG 290
M+L M+ G
Sbjct: 260 CMMLHMLNG 268
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 94 LGQGGFGSV------YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG V G+ +++ KVL S + G E++ + H +++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 80
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
K + ++ E+ N D + ++ S + E R Q I +EY HR
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMS----EQEARRFFQ---QIISAVEYCHRH- 132
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
+IVH D+KP N+LL E KI+DFGL+ + +F+ + G+ Y APEV +
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKT--SCGSPNYAAPEVISGK 187
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
+ G + DV+S G+++ M+ R
Sbjct: 188 LYAG--PEVDVWSCGVILYVMLCRR 210
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 94 LGQGGFGSVYK-GKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSFLGF 149
+G G +G K + DG+++ K L + E ++EV + + H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 150 CYEKKKRAL--IYEFMPNGSLDQFIY--DEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
++ L + E+ G L I +E ++ + R M Q+ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA----LKECHR 129
Query: 206 GCN--IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
+ ++H D+KP N+ L K+ DFGLA++ SF GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GTPYYMSPEQ 187
Query: 264 FCRNFGGVSHKSDVYSYGMMILEM 287
N + KSD++S G ++ E+
Sbjct: 188 M--NRMSYNEKSDIWSLGCLLYEL 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 94 LGQGGFGSVYK-GKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSFLGF 149
+G G +G K + DG+++ K L + E ++EV + + H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 150 CYEKKKRAL--IYEFMPNGSLDQFIY--DEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
++ L + E+ G L I +E ++ + R M Q+ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA----LKECHR 129
Query: 206 GCN--IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
+ ++H D+KP N+ L K+ DFGLA++ E F GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GTPYYMSPEQ 187
Query: 264 FCRNFGGVSHKSDVYSYGMMILEM 287
N + KSD++S G ++ E+
Sbjct: 188 M--NRMSYNEKSDIWSLGCLLYEL 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G G +GSV G VA+K L S++ + E+ + H NV+ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 150 CYEKKKRALIYEF---MPNGSLD-QFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
Y+F MP D Q I E S K+++ + + +GL+Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSE--EKIQY-----LVYQMLKGLKYIHS 162
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
+VH D+KP N+ + ED KI DFGLA+ ++ + M G T Y APEV
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL 214
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGR 291
++ + D++S G ++ EM+ G+
Sbjct: 215 -SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 94 LGQGGFGSVYK-GKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSFLGF 149
+G G +G K + DG+++ K L + E ++EV + + H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 150 CYEKKKRAL--IYEFMPNGSLDQFIY--DEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
++ L + E+ G L I +E ++ + R M Q+ + L+ HR
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA----LKECHR 129
Query: 206 GCN--IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
+ ++H D+KP N+ L K+ DFGLA++ SF GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV--GTPYYMSPEQ 187
Query: 264 FCRNFGGVSHKSDVYSYGMMILEM 287
N + KSD++S G ++ E+
Sbjct: 188 M--NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 94 LGQGGFGSV------YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG V G+ +++ KVL S + G E++ + H +++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 79
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
K + ++ E+ N D + ++ S + E R Q I +EY HR
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMS----EQEARRFFQ---QIISAVEYCHRH- 131
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
+IVH D+KP N+LL E KI+DFGL+ + +F+ + G+ Y APEV +
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKT--SCGSPNYAAPEVISGK 186
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
+ G + DV+S G+++ M+ R
Sbjct: 187 LYAG--PEVDVWSCGVILYVMLCRR 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 94 LGQGGFGSV------YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG V G+ +++ KVL S + G E++ + H +++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 70
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
K + ++ E+ N D + ++ S + E R Q I +EY HR
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMS----EQEARRFFQ---QIISAVEYCHRH- 122
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
+IVH D+KP N+LL E KI+DFGL+ + +F+ + G+ Y APEV +
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKT--SCGSPNYAAPEVISGK 177
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
+ G + DV+S G+++ M+ R
Sbjct: 178 LYAG--PEVDVWSCGVILYVMLCRR 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 94 LGQGGFGSVYKGK----LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT--SHVNVVSFL 147
LG G +G V+ + G+L A+KVLK + + + E + H+ FL
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 148 GFCY----EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG-IARGLEY 202
+ + K LI +++ G L + E + QI VG I LE+
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-------VQIYVGEIVLALEH 174
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIA 260
LH+ + I++ DIK NILL + ++DFGL+K ++++ E G TI Y+A
Sbjct: 175 LHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG---TIEYMA 228
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVV--------GRKNAEVKVS---LSSEIYFPNS 309
P++ G D +S G+++ E++ G KN++ ++S L SE +P
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 288
Query: 310 I 310
+
Sbjct: 289 M 289
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 94 LGQGGFGSV------YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG V G+ +++ KVL S + G E++ + H +++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 74
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
K + ++ E+ N D + ++ S + E R Q I +EY HR
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMS----EQEARRFFQ---QIISAVEYCHRH- 126
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
+IVH D+KP N+LL E KI+DFGL+ + +F+ + G+ Y APEV +
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKT--SCGSPNYAAPEVISGK 181
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGR 291
+ G + DV+S G+++ M+ R
Sbjct: 182 LYAG--PEVDVWSCGVILYVMLCRR 204
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAV+++ +++N ++ EV M +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+K L+ E+ G + F Y + K QI + +Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEV--FDYLVAHGRMKEKEARAKFRQIVSAV----QYCHQKF-- 133
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF-C 265
IVH D+K N+LL D KI+DFG + K + F G+ Y APE+F
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC------GSPPYAAPELFQG 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 187 KKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 39/241 (16%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFIN-------EVASMSKT----SHV 141
LG+GGFG+V+ G +L D VA+KV+ ++V G ++ EVA + K H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 142 NVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLE 201
V+ L + ++ L+ E P + D F Y E + E + C +A ++
Sbjct: 99 GVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLG---EGPSRCFFGQVVA-AIQ 153
Query: 202 YLH-RGCNIRIVHFDIKPHNILLG-EDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
+ H RG +VH DIK NIL+ C K+ DFG L E + G R Y
Sbjct: 154 HCHSRG----VVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTR---VYS 205
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG----RKNAEVKVSLSSEIYFPNSIYKHIE 315
PE R+ + + V+S G+++ +MV G ++ E+ L +E++FP H+
Sbjct: 206 PPEWISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQEI---LEAELHFP----AHVS 257
Query: 316 P 316
P
Sbjct: 258 P 258
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 46 DFGFGRFRK-KNTEN-ENAEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVY 103
D F RK KN +N N ++ L K +Y VK +G+G FG V
Sbjct: 41 DLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVK--------VIGRGAFGEVQ 92
Query: 104 KGKLPDGRLV-AVKVLKN----SKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRAL 158
+ + V A+K+L + + F E M+ + VV + K +
Sbjct: 93 LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 152
Query: 159 IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKP 218
+ E+MP G L + SN + +W V +A L+ +H ++ ++H D+KP
Sbjct: 153 VMEYMPGGDLVNLM-----SNYDVPEKWAKFYTAEVVLA--LDAIH---SMGLIHRDVKP 202
Query: 219 HNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSH---KS 275
N+LL + K++DFG + + + A GT YI+PEV ++ GG + +
Sbjct: 203 DNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVL-KSQGGDGYYGREC 260
Query: 276 DVYSYGMMILEMVVG 290
D +S G+ + EM+VG
Sbjct: 261 DWWSVGVFLFEMLVG 275
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 92 NKLGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
++LG+G VY+ K + A+KVLK + V+ + E+ + + SH N++
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKT-VDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 151 YEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
+ +L+ E + G L D+ + S R I + YLH
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEKGYYSE-------RDAADAVKQILEAVAYLHEN--- 167
Query: 210 RIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF-- 264
IVH D+KP N+L D KI+DFGL+K+ E + + M GT GY APE+
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRG 224
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
C + D++S G++ ++ G
Sbjct: 225 C----AYGPEVDMWSVGIITYILLCG 246
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSF 146
LG GG V+ + D RL VAVKVL+ F E + + +H +V+
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 147 LGFCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLE 201
+ ++ E++ +L ++ E R +E CQ L
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALN 130
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
+ H+ I+H D+KP NI++ K+ DFG+A+ +++ S GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + V +SDVYS G ++ E++ G
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 93 KLGQGGFGSVYKGKLPD-GRLVAVKVL---KNSKVNGEEFINEVASMSKTSHVNVVSFLG 148
K+G+G +G V+K + D G++VA+K ++ V + + E+ + + H N+V+ L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEE--SSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
K++ L++E+ + L + + ++ + + W+T+ + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL--------QAVNFCHKH 121
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+H D+KP NIL+ + K+ DFG A+L + T Y +PE+
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--DEVATRWYRSPELLVG 176
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ DV++ G + E++ G
Sbjct: 177 D-TQYGPPVDVWAIGCVFAELLSG 199
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 86 MTNSFS--NKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTS 139
MT+ + +LG+G F V + K+P G+ A K++ K++ ++ E
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARG 199
H N+V E+ L+++ + G L + I + R E+ + + I +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAR--EYYSEADASHCIQQI 112
Query: 200 LEYLHRGCNIR-IVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
LE ++ C++ IVH D+KP N+LL + K++DFGLA + + + G GT
Sbjct: 113 LESVNH-CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGT 169
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP------NS 309
GY++PEV ++ G D+++ G+++ ++VG Y P +
Sbjct: 170 PGYLSPEVLRKDPYG--KPVDMWACGVILYILLVG--------------YPPFWDEDQHR 213
Query: 310 IYKHIE------PGNEFQLAGVVTEEEKEMAKKMILV 340
+Y+ I+ P E+ VT E K++ KM+ +
Sbjct: 214 LYQQIKAGAYDFPSPEWD---TVTPEAKDLINKMLTI 247
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 94 LGQGGFGSV-----YKGKLPDG-RLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFL 147
LG+G FG V YK + + ++ ++LK S ++ E++ + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 148 GFCYEKKKRALIYEFMPNGSLDQFIYDEE--SSNINRKLEWRTMCQIAVGIARGLEYLHR 205
++ E+ G L +I +++ + + R+ + +C I EY HR
Sbjct: 76 DVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAI--------EYCHR 126
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF- 264
+IVH D+KP N+LL ++ KI+DFGL+ + +F+ + G+ Y APEV
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLK--TSCGSPNYAAPEVIN 180
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVGR 291
+ + G + DV+S G+++ M+VGR
Sbjct: 181 GKLYAG--PEVDVWSCGIVLYVMLVGR 205
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT---SHVNVVSFLGF 149
LG+G FG V K GR A+K+LK + ++ + + ++ S ++ L +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 150 CYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
++ R + E+ G L + E + +R + I L+YLH N
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSALDYLHSEKN 269
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ V+ D+K N++L +D KI+DFGL K E + +M GT Y+APEV N
Sbjct: 270 V--VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 269 GGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIEPGNEFQ 321
G + D + G+++ EM+ GR ++ E ++ L EI FP + + P +
Sbjct: 326 YGRA--VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 379
Query: 322 LAGVVTEEEKE 332
L+G++ ++ K+
Sbjct: 380 LSGLLKKDPKQ 390
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 91 SNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTSHVNVVSF 146
S +LG+G F V + G+ A K LK + + E ++E+A + V
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 147 LGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
L YE LI E+ G + E + ++ R + QI G+ YLH+
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL----EGVYYLHQ 149
Query: 206 GCNIRIVHFDIKPHNILLGEDFCP----KISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
IVH D+KP NILL + P KI DFG+++ K + GT Y+AP
Sbjct: 150 N---NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAP 202
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMV------VGRKNAEVKVSLS 301
E+ N+ ++ +D+++ G++ ++ VG N E +++S
Sbjct: 203 EIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS 246
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 86 MTNSFS--NKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTS 139
MT+ + +LG+G F V + K+P G+ A K++ K++ ++ E
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARG 199
H N+V E+ L+++ + G L + I + R E+ + + I +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAR--EYYSEADASHCIQQI 112
Query: 200 LEYLHRGCNIR-IVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
LE ++ C++ IVH D+KP N+LL + K++DFGLA + + + G GT
Sbjct: 113 LESVNH-CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGT 169
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP------NS 309
GY++PEV ++ G D+++ G+++ ++VG Y P +
Sbjct: 170 PGYLSPEVLRKDPYG--KPVDMWACGVILYILLVG--------------YPPFWDEDQHR 213
Query: 310 IYKHIE------PGNEFQLAGVVTEEEKEMAKKMILV 340
+Y+ I+ P E+ VT E K++ KM+ +
Sbjct: 214 LYQQIKAGAYDFPSPEWD---TVTPEAKDLINKMLTI 247
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 93 KLGQGGFGSVYK-GKLPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG V++ + G A K V+ + + E E+ +MS H +V+
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ + +IYEFM G L + + DE + K+ + + +GL ++H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---N 169
Query: 211 IVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
VH D+KP NI+ K+ DFGL + K+ S+ GT + APEV
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEV--AEG 224
Query: 269 GGVSHKSDVYSYGMMILEMVVG 290
V + +D++S G++ ++ G
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSG 246
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSF 146
LG GG V+ + D RL VAVKVL+ F E + + +H +V+
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 147 LGFCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLE 201
+ ++ E++ +L ++ E R +E CQ L
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALN 130
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
+ H+ I+H D+KP NI++ K+ DFG+A+ +++ S GT Y++
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + V +SDVYS G ++ E++ G
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT---SHVNVVSFLGF 149
LG+G FG V K GR A+K+LK + ++ + + ++ S ++ L +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 150 CYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
++ R + E+ G L + E + +R + I L+YLH N
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSALDYLHSEKN 129
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ V+ D+K N++L +D KI+DFGL K E + +M GT Y+APEV N
Sbjct: 130 V--VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 269 GGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIEPGNEFQ 321
G + D + G+++ EM+ GR ++ E ++ L EI FP + + P +
Sbjct: 186 YGRA--VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 239
Query: 322 LAGVVTEEEKE 332
L+G++ ++ K+
Sbjct: 240 LSGLLKKDPKQ 250
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT---SHVNVVSFLGF 149
LG+G FG V K GR A+K+LK + ++ + + ++ S ++ L +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 150 CYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
++ R + E+ G L + E + +R + I L+YLH N
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSALDYLHSEKN 130
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ V+ D+K N++L +D KI+DFGL K E + +M GT Y+APEV N
Sbjct: 131 V--VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 269 GGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIEPGNEFQ 321
G + D + G+++ EM+ GR ++ E ++ L EI FP + + P +
Sbjct: 187 YGRA--VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 240
Query: 322 LAGVVTEEEKE 332
L+G++ ++ K+
Sbjct: 241 LSGLLKKDPKQ 251
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKT---SHVNVVSFLGF 149
LG+G FG V K GR A+K+LK + ++ + + ++ S ++ L +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 150 CYEKKKR-ALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
++ R + E+ G L + E + +R + I L+YLH N
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSALDYLHSEKN 131
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ V+ D+K N++L +D KI+DFGL K E + +M GT Y+APEV N
Sbjct: 132 V--VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 269 GGVSHKSDVYSYGMMILEMVVGR-----KNAE--VKVSLSSEIYFPNSIYKHIEPGNEFQ 321
G + D + G+++ EM+ GR ++ E ++ L EI FP + + P +
Sbjct: 188 YGRA--VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 241
Query: 322 LAGVVTEEEKE 332
L+G++ ++ K+
Sbjct: 242 LSGLLKKDPKQ 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 126 EEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLE 185
++F NE+ ++ + ++ G + +IYE+M N S+ +F DE +++
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF--DEYFFVLDKNYT 145
Query: 186 WRTMCQIAVGIARGL----EYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSE 241
Q+ I + + Y+H NI H D+KP NIL+ ++ K+SDFG ++
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 242 KKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSL 300
K+ + G+RGT ++ PE F K D++S G+ + M +K+SL
Sbjct: 204 DKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 29/211 (13%)
Query: 95 GQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY- 151
GQG FG+V GK G VA+K V+++ + E + + ++ H N+V + Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 152 --EKKKRAL----IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAV---GIARGLEY 202
E+ +R + + E++P+ N R+ I V + R +
Sbjct: 91 LGERDRRDIYLNVVMEYVPD------TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 203 LHRGCNIRIVHFDIKPHNILLGE-DFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAP 261
LH ++ + H DIKPHN+L+ E D K+ DFG AK E ++ + +R Y AP
Sbjct: 145 LHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAP 200
Query: 262 EVFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
E+ FG + + D++S G + EM++G
Sbjct: 201 ELI---FGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 26/236 (11%)
Query: 90 FSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVV 144
F LG+G FG V ++ + G L AVKVLK + + E + E +S + +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 145 SFLGFCYEKKKRAL-IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L C++ R + EF+ G L ++ + S R+ + A I L +L
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKS---RRFDEARARFYAAEIISALMFL 140
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEV 263
H + I++ D+K N+LL + K++DFG+ K E + ++ GT YIAPE+
Sbjct: 141 H---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEI 195
Query: 264 FCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEV-------KVSLSSEIYFPNSIYK 312
G + D ++ G+++ EM+ G E + L+ E+ +P +++
Sbjct: 196 LQEMLYGPA--VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 94 LGQGGFGSVYKGKLPDGRL---VAVKVLKNSKVNGEEFI----NEVASMSKTSHVNVVSF 146
LG GG V+ + D RL VAVKVL+ F E + + +H +V+
Sbjct: 37 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 147 LGFCYEKKKRA----LIYEFMPNGSLDQFIYDEESSNINRKLE-WRTMCQIAVGIARGLE 201
+ ++ E++ +L ++ E R +E CQ L
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ-------ALN 147
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGARGTIGYIA 260
+ H+ I+H D+KP NI++ K+ DFG+A+ +++ S GT Y++
Sbjct: 148 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + V +SDVYS G ++ E++ G
Sbjct: 205 PEQARGD--SVDARSDVYSLGCVLYEVLTG 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEF--INEVASMSKTSHVNVVSFLG 148
K+GQG FG V+K + G+ VA+K VL ++ G + E+ + H NVV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 149 FC------YEKKKRA--LIYEFMPN---GSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
C Y + K + L+++F + G L + S I R ++ +
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------MLL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGAR-GT 255
GL Y+HR +I+H D+K N+L+ D K++DFGLA+ S K S + R T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 256 IGYIAPEVFC--RNFGGVSHKSDVYSYGMMILEM 287
+ Y PE+ R++G D++ G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLC--------GIKHLHS 144
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 198
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 199 ----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 93 KLGQGGFGSVYK-GKLPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFC 150
+LG G FG V++ + G A K V+ + + E E+ +MS H +V+
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIR 210
+ + +IYEFM G L + + DE + K+ + + +GL ++H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADE-----HNKMSEDEAVEYMRQVCKGLCHMHEN---N 275
Query: 211 IVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
VH D+KP NI+ K+ DFGL + K+ S+ GT + APEV
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEV--AEG 330
Query: 269 GGVSHKSDVYSYGMMILEMVVG 290
V + +D++S G++ ++ G
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSG 352
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L+ M + + G+++LH
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLXQVIQME--------LDHERMSYLLYQMLXGIKHLHS 144
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 198
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 199 ----GMGYKENVDIWSVGCIMGEMV 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEF--INEVASMSKTSHVNVVSFLG 148
K+GQG FG V+K + G+ VA+K VL ++ G + E+ + H NVV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 149 FC------YEKKKRA--LIYEFMPN---GSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
C Y + K + L+++F + G L + S I R ++ +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM---------LL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGAR-GT 255
GL Y+HR +I+H D+K N+L+ D K++DFGLA+ S K S + R T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 256 IGYIAPEVFC--RNFGGVSHKSDVYSYGMMILEM 287
+ Y PE+ R++G D++ G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 74/279 (26%)
Query: 94 LGQGGFGSVY--KGKLPDGRLVAVKV-LKNSKVNGEEFINEVASMSKTSHVNVV----SF 146
+G+GGFG V+ K K+ D ++ L N ++ E+ + EV +++K H +V ++
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRT------------- 188
L EK + + ++ + S D + D S I R + T
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 189 --------MCQ------------------------IAVGIARGLEYLH-RGCNIRIVHFD 215
+C+ I + IA +E+LH +G ++H D
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG----LMHRD 189
Query: 216 IKPHNILLGEDFCPKISDFGLAKLSEKKE----------SFISMLGARGTIGYIAPEVFC 265
+KP NI D K+ DFGL ++ E ++ + G GT Y++PE
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEI 304
N SHK D++S G+++ E++ +V + +++
Sbjct: 250 GN--NYSHKVDIFSLGLILFELLYSFSTQMERVRIITDV 286
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVVSFLG 148
+G+G + V +L R+ A+KV+K VN +E I+ V + + S+ + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 149 FCYEKKKRAL-IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH-RG 206
C++ + R + E++ G L F + RKL + I+ L YLH RG
Sbjct: 88 SCFQTESRLFFVIEYVNGGDL-MFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG 141
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
I++ D+K N+LL + K++D+G+ K + S GT YIAPE+
Sbjct: 142 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRG 195
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
G S D ++ G+++ EM+ GR ++
Sbjct: 196 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
+G G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+MP G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + K++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
+G G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+MP G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + K++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE---FINEVASMSKTSHVNVVSFLGFC 150
+G+G FG VY G+ G VA++++ + N ++ F EV + +T H NVV F+G C
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 151 YEKKKRALIYEFMPNGSLDQFIYDEE-SSNINRKLEWRTMCQIAVGIARGLEYLH-RGCN 208
A+I +L + D + ++N+ QIA I +G+ YLH +G
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR------QIAQEIVKGMGYLHAKG-- 150
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLS-----EKKESFISMLGARGTIGYIAPEV 263
I+H D+K N+ ++ I+DFGL +S ++E + + G + ++APE+
Sbjct: 151 --ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRI--QNGWLCHLAPEI 205
Query: 264 FCRNFG--------GVSHKSDVYSYGMMILEM 287
R S SDV++ G + E+
Sbjct: 206 I-RQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEF--INEVASMSKTSHVNVVSFLG 148
K+GQG FG V+K + G+ VA+K VL ++ G + E+ + H NVV+ +
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 149 FC------YEKKKRA--LIYEFMPN---GSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
C Y + K + L+++F + G L + S I R ++ +
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------MLL 134
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGAR-GT 255
GL Y+HR +I+H D+K N+L+ D K++DFGLA+ S K S + R T
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 256 IGYIAPEVFC--RNFGGVSHKSDVYSYGMMILEM 287
+ Y PE+ R++G D++ G ++ EM
Sbjct: 192 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLGF 149
+G+G F V + + G+ VAVK++ +++N ++ EV +H N+V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 150 CYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+K L+ E+ G + D + + ++R I ++Y H+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ-------IVSAVQYCHQKF- 133
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLA---KLSEKKESFISMLGARGTIGYIAPEVF- 264
IVH D+K N+LL D KI+DFG + K ++F G Y APE+F
Sbjct: 134 --IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC------GAPPYAAPELFQ 185
Query: 265 CRNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G + DV+S G+++ +V G
Sbjct: 186 GKKYDG--PEVDVWSLGVILYTLVSG 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEK 153
+G+G +G V++G L G VAVK+ + E+ + H N++ F+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 154 KKRA----LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH----- 204
+ + LI + +GSL F+ + LE ++AV A GL +LH
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQ-------RQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 205 -RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--GTIGYIAP 261
+G I H D K N+L+ + I+D GLA + + ++ + GT Y+AP
Sbjct: 128 TQG-KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 262 EVF---CRNFGGVSHK-SDVYSYGMMILEM 287
EV R S+K +D++++G+++ E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEF--INEVASMSKTSHVNVVSFLG 148
K+GQG FG V+K + G+ VA+K VL ++ G + E+ + H NVV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 149 FC------YEKKKRA--LIYEFMPN---GSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
C Y + K + L+++F + G L + S I R ++ +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ---------MLL 135
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK-LSEKKESFISMLGAR-GT 255
GL Y+HR +I+H D+K N+L+ D K++DFGLA+ S K S + R T
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 256 IGYIAPEVFC--RNFGGVSHKSDVYSYGMMILEM 287
+ Y PE+ R++G D++ G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVVSFLG 148
+G+G + V +L R+ A+KV+K VN +E I+ V + + S+ + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 149 FCYEKKKRAL-IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH-RG 206
C++ + R + E++ G L F + RKL + I+ L YLH RG
Sbjct: 73 SCFQTESRLFFVIEYVNGGDL-MFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG 126
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
I++ D+K N+LL + K++D+G+ K + S GT YIAPE+
Sbjct: 127 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRG 180
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
G S D ++ G+++ EM+ GR ++
Sbjct: 181 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 49/267 (18%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLG 148
+LG+G F V + K+ G+ A K++ K++ ++ E H N+V
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
E+ LI++ + G L + I + R E+ + + I + LE +
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDI-------VAR--EYYSEADASHCIQQILEAVLHCHQ 139
Query: 209 IRIVHFDIKPHNILLGEDF---CPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
+ +VH D+KP N+LL K++DFGLA E ++ + G GT GY++PEV
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLR 197
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP------NSIYKHIE---- 315
++ G D+++ G+++ ++VG Y P + +Y+ I+
Sbjct: 198 KDPYG--KPVDLWACGVILYILLVG--------------YPPFWDEDQHRLYQQIKAGAY 241
Query: 316 --PGNEFQLAGVVTEEEKEMAKKMILV 340
P E+ VT E K++ KM+ +
Sbjct: 242 DFPSPEWD---TVTPEAKDLINKMLTI 265
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYE 152
++G+G +G V+ GK G VAVKV ++ E+ H N++ F+ +
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 153 ----KKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC- 207
+ LI ++ NGSL ++ +S+ ++ K +M ++A GL +LH
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL---KSTTLDAK----SMLKLAYSSVSGLCHLHTEIF 155
Query: 208 ----NIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAP 261
I H D+K NIL+ ++ I+D GLA +S+ E I GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 262 EV----FCRNFGGVSHKSDVYSYGMMILEM 287
EV RN +D+YS+G+++ E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G+++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 144
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 198
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 199 ----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G+++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVVSFLG 148
+G+G + V +L R+ A+KV+K VN +E I+ V + + S+ + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 149 FCYEKKKRAL-IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH-RG 206
C++ + R + E++ G L F + RKL + I+ L YLH RG
Sbjct: 77 SCFQTESRLFFVIEYVNGGDL-MFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG 130
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
I++ D+K N+LL + K++D+G+ K + S GT YIAPE+
Sbjct: 131 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRG 184
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
G S D ++ G+++ EM+ GR ++
Sbjct: 185 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKK 154
G G F + +L + L V +L+ KV+G + + T N FL
Sbjct: 54 GGGSFSAEEVQELREATLKEVDILR--KVSGHP---NIIQLKDTYETNTFFFL------- 101
Query: 155 KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHF 214
+++ M G L F Y E ++ K E R + + + + L L+ IVH
Sbjct: 102 ----VFDLMKKGEL--FDYLTEKVTLSEK-ETRKIMRALLEVICALHKLN------IVHR 148
Query: 215 DIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF-CR---NFGG 270
D+KP NILL +D K++DFG + + E S+ GT Y+APE+ C N G
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEIIECSMNDNHPG 205
Query: 271 VSHKSDVYSYGMMILEMVVG 290
+ D++S G+++ ++ G
Sbjct: 206 YGKEVDMWSTGVIMYTLLAG 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P +L++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMV 288
V G+ +K D++S G ++ EMV
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 35/279 (12%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKT 138
D K++ +F KL + G ++KG+ G + VKVLK S +F E +
Sbjct: 8 DFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 139 SHVNVVSFLGFCYEKKK--RALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
SH NV+ LG C LI + P GSL Y+ N ++ + A+
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSL----YNVLHEGTNFVVDQSQAVKFALDX 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
ARG +LH I + ++ + ED +IS ++ K SF S G
Sbjct: 121 ARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQSP-GRXYAP 172
Query: 257 GYIAPEVFCRNFGGVSHKS-DVYSYGMMILEMVVGR------KNAEV--KVSLSS-EIYF 306
++APE + + +S D +S+ +++ E+V N E+ KV+L
Sbjct: 173 AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI 232
Query: 307 PNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLE 345
P I H+ +L + E+ K ++ +LE
Sbjct: 233 PPGISPHVS-----KLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-- 84
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P +L++F + + +N I +L+ M + + G+++
Sbjct: 85 ----------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 188
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMV 288
V G+ +K D++S G ++ EMV
Sbjct: 189 VIL----GMGYKENVDIWSVGCIMGEMV 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 94 LGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGE--EFINEVASMSKTSHVNVVSFLGFC 150
+G GGF V + G +VA+K++ + + + E+ ++ H ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 151 YEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNI 209
K ++ E+ P G L D I + S ++ +R + AV Y HR
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS-AVAYVHSQGYAHR---- 132
Query: 210 RIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFG 269
D+KP N+L E K+ DFGL + + + + G++ Y APE+ +
Sbjct: 133 -----DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELI-QGKS 185
Query: 270 GVSHKSDVYSYGMMILEMVVG 290
+ ++DV+S G+++ ++ G
Sbjct: 186 YLGSEADVWSMGILLYVLMCG 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNSKVNGEEFINEVAS----MSKTSHVNVVSFLG 148
+G+G + V +L R+ A++V+K VN +E I+ V + + S+ + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 149 FCYEKKKRAL-IYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH-RG 206
C++ + R + E++ G L F + RKL + I+ L YLH RG
Sbjct: 120 SCFQTESRLFFVIEYVNGGDL-MFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG 173
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
I++ D+K N+LL + K++D+G+ K + S GT YIAPE+
Sbjct: 174 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--GTPNYIAPEILRG 227
Query: 267 NFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
G S D ++ G+++ EM+ GR ++
Sbjct: 228 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFGLAK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 196 IARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ AR
Sbjct: 207 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 255 TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 263 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 293
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 141 VNVVSFLGFCYEK-KKRALIYEFMPNGSLDQFI 172
+NVV+ LG C + +I EF G+L ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 196 IARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ AR
Sbjct: 202 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 255 TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 258 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 288
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 141 VNVVSFLGFCYEK-KKRALIYEFMPNGSLDQFI 172
+NVV+ LG C + +I EF G+L ++
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 196 IARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ AR
Sbjct: 209 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 255 TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 265 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 295
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 90 FSNKLGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH- 140
LG+G FG V + K R VAVK+LK + E ++E+ + H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 141 VNVVSFLGFCYEK-KKRALIYEFMPNGSLDQFI 172
+NVV+ LG C + +I EF G+L ++
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 196 IARGLEYL-HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARG 254
+A+G+E+L R C +H D+ NILL E KI DFGLA+ K ++ AR
Sbjct: 200 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 255 TIGYIAPE-VFCRNFGGVSHKSDVYSYGMMILEM 287
+ ++APE +F R + + +SDV+S+G+++ E+
Sbjct: 256 PLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 286
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 94 LGQGGFGSVYKG------KLPDGRLVAVKVLKNSKVNGEE--FINEVASMSKTSH-VNVV 144
LG+G FG V + K R VAVK+LK + E ++E+ + H +NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 145 SFLGFCYEK-KKRALIYEFMPNGSLDQFI 172
+ LG C + +I EF G+L ++
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 95 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 145
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVI- 198
Query: 266 RNFG-GVSHKSDVYSYGMMILEMV 288
G G D++S G ++ EMV
Sbjct: 199 --LGMGYKENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 144
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 198
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 199 ----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 144
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 198
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 199 ----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 35 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 93 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 143
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 144 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 197
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 198 ----GMGYKENVDIWSVGCIMGEMV 218
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 95 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 145
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 199
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 200 ----GMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 88 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 138
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 192
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 193 ----GMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 87 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 137
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 138 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 191
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 192 ----GMGYKENVDIWSVGCIMGEMV 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 54 KKNTENEN-------AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGK 106
KK +E E+ A+ F++ + S A + +R+ LG G FG V K
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVK 62
Query: 107 LPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIY 160
+ G A+K+L KV E +NE + + +V L F ++ ++
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVM 121
Query: 161 EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
E++P G + + I R E A I EYLH ++ +++ D+KP N
Sbjct: 122 EYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 221 ILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSY 280
+L+ + +++DFG AK + + + GT Y+APE+ G + D ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWAL 225
Query: 281 GMMILEMVVG 290
G++I EM G
Sbjct: 226 GVLIYEMAAG 235
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 182
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVI- 235
Query: 266 RNFG-GVSHKSDVYSYGMMILEMV 288
G G D++S G ++ EMV
Sbjct: 236 --LGMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 88 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 138
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVIL 192
Query: 266 RNFGGVSHKS--DVYSYGMMILEMV 288
G+ +K D++S G ++ EMV
Sbjct: 193 ----GMGYKENVDIWSVGCIMGEMV 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 54 KKNTENEN-------AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGK 106
KK +E E+ A+ F++ + S A + +R+ LG G FG V K
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVK 62
Query: 107 LPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIY 160
+ G A+K+L KV E +NE + + +V L F ++ ++
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVM 121
Query: 161 EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
E++P G + + I R E A I EYLH ++ +++ D+KP N
Sbjct: 122 EYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 221 ILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSY 280
+L+ + +++DFG AK + + + GT Y+APE+ G + D ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWAL 225
Query: 281 GMMILEMVVG 290
G++I EM G
Sbjct: 226 GVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 62 AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKN 120
A+ F++ + S A + +R+ LG G FG V K + G A+K+L
Sbjct: 15 AKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 121 SKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDE 175
KV E +NE + + +V L F ++ ++ E++P G + +
Sbjct: 70 QKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVMEYVPGGEMFSHL--- 125
Query: 176 ESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFG 235
I R E A I EYLH ++ +++ D+KP N+L+ + +++DFG
Sbjct: 126 --RRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 236 LAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
AK + + + GT Y+APE+ G + D ++ G++I EM G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++S L
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 152 EKKKRA------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
+K L+ E M + +L Q I E L ++ +C G+++LH
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLHS 182
Query: 206 GCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APEV
Sbjct: 183 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPEVI- 235
Query: 266 RNFG-GVSHKSDVYSYGMMILEMV 288
G G D++S G ++ EMV
Sbjct: 236 --LGMGYKENVDIWSVGCIMGEMV 257
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 54 KKNTENEN-------AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGK 106
KK +E E+ A+ F++ + S A + +R+ LG G FG V K
Sbjct: 28 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVK 82
Query: 107 LPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIY 160
+ G A+K+L KV E +NE + + +V L F ++ ++
Sbjct: 83 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVM 141
Query: 161 EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
E++P G + + I R E A I EYLH ++ +++ D+KP N
Sbjct: 142 EYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPEN 192
Query: 221 ILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSY 280
+L+ + +++DFG AK + + + GT Y+APE+ G + D ++
Sbjct: 193 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWAL 245
Query: 281 GMMILEMVVG 290
G++I EM G
Sbjct: 246 GVLIYEMAAG 255
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVK-VLKNSKVNGEEFINEVASMSKTS-HVNVVSFLGFC 150
L +GGF VY+ + + GR A+K +L N + I EV M K S H N+V F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 151 YEKKKRA-------LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
K+ + L+ + G L +F+ ES L T+ +I R ++++
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG---PLSCDTVLKIFYQTCRAVQHM 152
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLA---------KLSEKKESFISMLGARG 254
HR I+H D+K N+LL K+ DFG A S ++ + + R
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 255 TIG-YIAPEV--FCRNFGGVSHKSDVYSYGMMI 284
T Y PE+ NF + K D+++ G ++
Sbjct: 212 TTPMYRTPEIIDLYSNF-PIGEKQDIWALGCIL 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 54 KKNTENEN-------AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGK 106
KK +E E+ A+ F++ + S A + +R+ LG G FG V K
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVK 62
Query: 107 LPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIY 160
+ G A+K+L KV E +NE + + +V L F ++ ++
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVM 121
Query: 161 EFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHN 220
E+ P G + + I R E A I EYLH ++ +++ D+KP N
Sbjct: 122 EYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 221 ILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSY 280
+++ + K++DFG AK + + + GT Y+APE+ G + D ++
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWAL 225
Query: 281 GMMILEMVVG 290
G++I EM G
Sbjct: 226 GVLIYEMAAG 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARG 199
H ++++ + L+++ M G L F Y E ++ K E R+ I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEK-ETRS---IMRSLLEA 212
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
+ +LH IVH D+KP NILL ++ ++SDFG + E E + GT GY+
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYL 266
Query: 260 APEVF-C---RNFGGVSHKSDVYSYGMMILEMVVG 290
APE+ C G + D+++ G+++ ++ G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
+G G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + K++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + + ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + +++DFGLAK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKK 154
G G F + +L + L V +L+ KV+G + + T N FL
Sbjct: 54 GGGSFSAEEVQELREATLKEVDILR--KVSGHP---NIIQLKDTYETNTFFFL------- 101
Query: 155 KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHF 214
+++ M G L F Y E ++ K E R + + + + L L+ IVH
Sbjct: 102 ----VFDLMKKGEL--FDYLTEKVTLSEK-ETRKIMRALLEVICALHKLN------IVHR 148
Query: 215 DIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF-CR---NFGG 270
D+KP NILL +D K++DFG + + E + GT Y+APE+ C N G
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMNDNHPG 205
Query: 271 VSHKSDVYSYGMMILEMVVG 290
+ D++S G+++ ++ G
Sbjct: 206 YGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKK 154
G G F + +L + L V +L+ KV+G + + T N FL
Sbjct: 41 GGGSFSAEEVQELREATLKEVDILR--KVSGHP---NIIQLKDTYETNTFFFL------- 88
Query: 155 KRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHF 214
+++ M G L F Y E ++ K E R + + + + L L+ IVH
Sbjct: 89 ----VFDLMKKGEL--FDYLTEKVTLSEK-ETRKIMRALLEVICALHKLN------IVHR 135
Query: 215 DIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVF-CR---NFGG 270
D+KP NILL +D K++DFG + + E + GT Y+APE+ C N G
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMNDNHPG 192
Query: 271 VSHKSDVYSYGMMILEMVVG 290
+ D++S G+++ ++ G
Sbjct: 193 YGKEVDMWSTGVIMYTLLAG 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 62 AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKN 120
A+ F++ + S A + +R+ LG G FG V K + G A+K+L
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 121 SKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDE 175
KV E +NE + + +V L F ++ ++ E++P G + +
Sbjct: 78 QKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVMEYVPGGEMFSHL--- 133
Query: 176 ESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFG 235
I R E A I EYLH ++ +++ D+KP N+L+ + +++DFG
Sbjct: 134 --RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 236 LAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
AK + + + GT Y+APE+ G + D ++ G++I EM G
Sbjct: 188 FAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVV--SFLGF 149
KLG G F +V+ K + + VA+K+++ KV E +E+ + + + + +G
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNI--------NRKLEWRTMCQIAVGIARGLE 201
+ K PNG +++ N+ +R + + QI+ + GL+
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKKESFISMLGARGT 255
Y+HR C I+H DIKP N+L+ P KI+D G A + E + + + R
Sbjct: 146 YMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTR-- 199
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y +PEV G +D++S +I E++ G
Sbjct: 200 -EYRSPEVLLGAPWGCG--ADIWSTACLIFELITG 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 62 AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKN 120
A+ F++ + S A + +R+ LG G FG V K + G A+K+L
Sbjct: 15 AKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHKETGNHYAMKILDK 69
Query: 121 SKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDE 175
KV E +NE + + +V L F ++ ++ E++P G + +
Sbjct: 70 QKVVKLKQIEHTLNEKRILQAVNFPFLVK-LEFSFKDNSNLYMVMEYVPGGEMFSHL--- 125
Query: 176 ESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFG 235
I R E A I EYLH ++ +++ D+KP N+L+ + +++DFG
Sbjct: 126 --RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 236 LAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
AK + + + GT Y+APE+ G + D ++ G++I EM G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF--------IYDEESSN-INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + D S I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 93 KLGQGGFGSVYKGK-LPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVV--SFLGF 149
KLG G F +V+ K + + VA+K+++ KV E +E+ + + + + +G
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 150 CYEKKKRALIYEFMPNGSLDQFIYDEESSNI--------NRKLEWRTMCQIAVGIARGLE 201
+ K PNG +++ N+ +R + + QI+ + GL+
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 202 YLHRGCNIRIVHFDIKPHNILLGEDFCP------KISDFGLAKLSEKKESFISMLGARGT 255
Y+HR C I+H DIKP N+L+ P KI+D G A + E + + + R
Sbjct: 146 YMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTR-- 199
Query: 256 IGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y +PEV G +D++S +I E++ G
Sbjct: 200 -EYRSPEVLLGAPWGCG--ADIWSTACLIFELITG 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 93
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E++P G + + I R E A I EYLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 144
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK 199
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 200 --GYNKAVDWWALGVLIYEMAAG 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 44/228 (19%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVK----VLKNSKVNGEEFINEVASMSKTS-HVNVVSF 146
KLG+G +G V+K G +VAVK +NS + + E+ +++ S H N+V+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS-TDAQRTFREIMILTELSGHENIVNL 74
Query: 147 LGFCYEKKKRA--LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLH 204
L R L++++M L I +NI LE + + + ++YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYM-ETDLHAVI----RANI---LEPVHKQYVVYQLIKVIKYLH 126
Query: 205 RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK---------------LSEKKESFIS- 248
G ++H D+KP NILL + K++DFGL++ ++E E+F
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 249 ---MLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYGMMILEMVVGR 291
+ T Y APE+ G + D++S G ++ E++ G+
Sbjct: 184 QPILTDYVATRWYRAPEIL---LGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 28/235 (11%)
Query: 62 AEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKLPD-GRLVAVKVLKN 120
A+ F++ + S A + +R+ LG G FG V K + G A+K+L
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIRT-----LGTGSFGRVMLVKHKETGNHYAMKILDK 77
Query: 121 SKV----NGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDE 175
KV E +NE + + + + L F ++ ++ E+ P G + +
Sbjct: 78 QKVVKLKQIEHTLNE-KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--- 133
Query: 176 ESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFG 235
I R E A I EYLH ++ +++ D+KP N+L+ + K++DFG
Sbjct: 134 --RRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFG 187
Query: 236 LAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
AK + + + GT Y+APE+ G + D ++ G++I EM G
Sbjct: 188 FAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 94 LGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
+G G FG + + K + LVAVK ++ + E E+ + H N+V F
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLEWRTMCQIAVGIARGLEYLHRGCNI 209
A++ E+ G L + I N R + E R Q + G+ Y H +
Sbjct: 86 TPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLIS---GVSYAH---AM 134
Query: 210 RIVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
++ H D+K N LL P KI+DFG +K S S A GT YIAPEV +
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AVGTPAYIAPEVLLKK 191
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ G +DV+S G+ + M+VG
Sbjct: 192 EYDG--KVADVWSCGVTLYVMLVG 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 37/248 (14%)
Query: 53 RKKNTENENAEAAFIRNYVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKL-PDGR 111
R+ + E +E Y P+ + +R++ +LG G +G V+K + DGR
Sbjct: 29 RRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLS-----RLGHGSYGEVFKVRSKEDGR 83
Query: 112 LVAVK----VLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGS 167
L AVK + K + + EV S K L +E+ + + S
Sbjct: 84 LYAVKRSMSPFRGPKDRARK-LAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPS 142
Query: 168 LDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDF 227
L Q + +++ W + + +A +LH + +VH D+KP NI LG
Sbjct: 143 LQQHC-EAWGASLPEAQVWGYLRDTLLALA----HLH---SQGLVHLDVKPANIFLGPRG 194
Query: 228 CPKISDFGL------AKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYG 281
K+ DFGL A E +E G Y+APE+ ++G +DV+S G
Sbjct: 195 RCKLGDFGLLVELGTAGAGEVQE---------GDPRYMAPELLQGSYGTA---ADVFSLG 242
Query: 282 MMILEMVV 289
+ ILE+
Sbjct: 243 LTILEVAC 250
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + + ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + + ++ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + K++DFG AK + + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 215 --GYNKAVDWWALGVLIYEMAAG 235
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 38 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 93
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 94 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + + + R Y APE
Sbjct: 144 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPE 197
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 198 VIL----GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPEVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 45/237 (18%)
Query: 71 VSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKG-KLPDGRLVAVKVLK----NSKVNG 125
VS AP + +R+T KLG+G +G VYK VA+K ++ V G
Sbjct: 24 VSAAPSATSIDRYRRIT-----KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 126 EEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLE 185
I EV+ + + H N++ + + LI+E+ N L +++ + N +
Sbjct: 79 TA-IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM------DKNPDVS 130
Query: 186 WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKISDFGLAK-- 238
R + + G+ + H + R +H D+KP N+LL E KI DFGLA+
Sbjct: 131 MRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
Query: 239 ---LSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKS---DVYSYGMMILEMVV 289
+ + I T+ Y PE+ G H S D++S + EM++
Sbjct: 188 GIPIRQFTHEII-------TLWYRPPEILL----GSRHYSTSVDIWSIACIWAEMLM 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE------FINEVASMSKTSHVNVVSF 146
K+G+G +G+V+K K + + LK +++ ++ + E+ + + H N+V
Sbjct: 9 KIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+ KK L++EF + L ++ + N L+ + + +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYF-----DSCNGDLDPEIVKSFLFQLLKGLGFCH-- 118
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+ ++H D+KP N+L+ + K++DFGLA+ S T+ Y P+V
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS--AEVVTLWYRPPDVL-- 173
Query: 267 NFGG--VSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNEFQLAG 324
FG S D++S G + E+ NA + +++ + K I F+L G
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELA----NAARPLFPGNDV---DDQLKRI-----FRLLG 220
Query: 325 VVTEEEKEMAKKM 337
TEE+ K+
Sbjct: 221 TPTEEQWPSMTKL 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ E++P G + + I R E A I EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---S 159
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK- 213
Query: 269 GGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 -GYNKAVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSFLG 148
+LG+G F V + G A K++ K++ +F E K H N+V
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E+ L+++ + G L + I Y E ++ + QI IA Y
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIA----YC 144
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H IVH ++KP N+LL + K++DFGLA E++ G GT GY++
Sbjct: 145 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLS 198
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PEV ++ S D+++ G+++ ++VG
Sbjct: 199 PEVLKKD--PYSKPVDIWACGVILYILLVG 226
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ E++P G + + I R E A I EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---S 159
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK- 213
Query: 269 GGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 -GYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 94 LGQGGFGSVYKGKLPD-GRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
+ ++ E++P G + + I R E A I EYLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH---S 159
Query: 209 IRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNF 268
+ +++ D+KP N+L+ + +++DFG AK + + + GT Y+APE+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK- 213
Query: 269 GGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 -GYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 195
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 196 VIL----GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 37 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 92
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 93 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 196
Query: 263 VFCRNFGGVSHKS--DVYSYGMMILEMVVG 290
V G+ +K D++S G ++ EM+ G
Sbjct: 197 VIL----GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 114
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 175 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 5 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 63
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 115
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 176 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 10 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 68
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 120
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 181 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 153
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 214 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 94 LGQGGFGSVYKGK-LPDGRLVAVKVLKNSKV----NGEEFINEVASMSKTSHVNVVSFLG 148
LG G FG V K + G A+K+L KV E +NE + + +V L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK-LE 107
Query: 149 FCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGC 207
F ++ ++ E+ P G + + I R E A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 208 NIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRN 267
++ +++ D+KP N+++ + +++DFG AK + + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 268 FGGVSHKSDVYSYGMMILEMVVG 290
G + D ++ G++I EM G
Sbjct: 214 --GYNKAVDWWALGVLIYEMAAG 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSFLG 148
+LG+G F V + G A K++ K++ +F E K H N+V
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E+ L+++ + G L + I Y E ++ + QI IA Y
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIA----YC 121
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H IVH ++KP N+LL + K++DFGLA E++ G GT GY++
Sbjct: 122 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLS 175
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PEV ++ S D+++ G+++ ++VG
Sbjct: 176 PEVLKKD--PYSKPVDIWACGVILYILLVG 203
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 30 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 140
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 201 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSFLG 148
+LG+G F V + G A K++ K++ +F E K H N+V
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E+ L+++ + G L + I Y E ++ + QI IA Y
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIA----YC 121
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H IVH ++KP N+LL + K++DFGLA E++ G GT GY++
Sbjct: 122 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLS 175
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PEV ++ S D+++ G+++ ++VG
Sbjct: 176 PEVLKKD--PYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFIN---EVASMSKTSHVNVVSFLG 148
+LG+G F V + G A K++ K++ +F E K H N+V
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 149 FCYEKKKRALIYEFMPNGSLDQFI-----YDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E+ L+++ + G L + I Y E ++ + QI IA Y
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQILESIA----YC 120
Query: 204 HRGCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIA 260
H IVH ++KP N+LL + K++DFGLA E++ G GT GY++
Sbjct: 121 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLS 174
Query: 261 PEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PEV ++ S D+++ G+++ ++VG
Sbjct: 175 PEVLKKD--PYSKPVDIWACGVILYILLVG 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 86 MTNSFS--NKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTS 139
MT+ + +G+G F V + KL G A K++ K++ ++ E
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARG 199
H N+V E+ L+++ + G L + I + R E+ + + I +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAR--EYYSEADASHCIQQI 112
Query: 200 LEYLHRGCNIRIVHFDIKPHNILLGEDF---CPKISDFGLAKLSEKKESFISMLGARGTI 256
LE + + +VH D+KP N+LL K++DFGLA + + + G GT
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTP 170
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GY++PEV + G D+++ G+++ ++VG
Sbjct: 171 GYLSPEVLRKEAYG--KPVDIWACGVILYILLVG 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 79 NYSDVKRMTNSFSNKLGQGGFGSVYKGKLPDGR----LVAVKVLKNSKVNGEEFIN---- 130
N VK +F LG+G FG V L D + L A+K+LK V ++ +
Sbjct: 12 NLDRVKLTDFNFLMVLGKGSFGKVM---LADRKGTEELYAIKILKKDVVIQDDDVECTMV 68
Query: 131 EVASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTM 189
E ++ ++ L C++ R + E++ G L +Y + K +
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVG---KFKEPQA 122
Query: 190 CQIAVGIARGLEYLH-RGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFIS 248
A I+ GL +LH RG I++ D+K N++L + KI+DFG+ KE +
Sbjct: 123 VFYAAEISIGLFFLHKRG----IIYRDLKLDNVMLDSEGHIKIADFGMC-----KEHMMD 173
Query: 249 MLGAR---GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGR 291
+ R GT YIAPE+ G S D ++YG+++ EM+ G+
Sbjct: 174 GVTTREFCGTPDYIAPEIIAYQPYGKS--VDWWAYGVLLYEMLAGQ 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 130 NEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRT 188
E+ + K +H ++ F ++ + ++ E M G L D+ + ++ KL +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKES 245
M ++YLH I+H D+KP N+LL ED KI+DFG +K+ +
Sbjct: 248 M-------LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 246 FISMLGARGTIGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLS 301
++ GT Y+APEV G + D +S G+++ + G +VSL
Sbjct: 298 MRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354
Query: 302 SEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
+I + Y I ++ V+E+ ++ KK+++V +TE+
Sbjct: 355 DQI--TSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 87 TNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSF 146
T +G+G FG V++GK G VAVK+ + + E+ H N++ F
Sbjct: 7 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 65
Query: 147 LGFCYEK----KKRALIYEFMPNGSLDQFIYDEESSNINR-KLEWRTMCQIAVGIARGLE 201
+ + + L+ ++ +GSL F Y +NR + M ++A+ A GL
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSL--FDY------LNRYTVTVEGMIKLALSTASGLA 117
Query: 202 YLHR---GCNIR--IVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGAR--G 254
+LH G + I H D+K NIL+ ++ I+D GLA + I + G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 255 TIGYIAPEVFCRNFGGVSH-----KSDVYSYGMMILEMV 288
T Y+APEV + + H ++D+Y+ G++ E+
Sbjct: 178 TKRYMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + ++
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 130 NEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRT 188
E+ + K +H ++ F ++ + ++ E M G L D+ + ++ KL +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKES 245
M ++YLH I+H D+KP N+LL ED KI+DFG +K+ +
Sbjct: 262 M-------LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 246 FISMLGARGTIGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLS 301
++ GT Y+APEV G + D +S G+++ + G +VSL
Sbjct: 312 MRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 302 SEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
+I + Y I ++ V+E+ ++ KK+++V +TE+
Sbjct: 369 DQI--TSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ E +++DFG AK + + +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---- 186
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 187 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 114 AVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFI 172
AVK++ SK + E I + + H N+++ + K ++ E M G L D+ +
Sbjct: 51 AVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 173 YDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNIL-LGEDFCP-- 229
+ S R + I + +EYLH +VH D+KP NIL + E P
Sbjct: 109 RQKFFSE-------REASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPES 158
Query: 230 -KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+I DFG AK + ++ T ++APEV R G D++S G+++ M+
Sbjct: 159 IRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQ--GYDAACDIWSLGVLLYTML 214
Query: 289 VG 290
G
Sbjct: 215 TG 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 78 YNYSDVKRMTNSFSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNGEEFI--NEVAS 134
Y+Y D+ +LG G FG V++ + GR+ K + N+ +++ NE++
Sbjct: 50 YDYYDI-------LEELGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDKYTVKNEISI 101
Query: 135 MSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDE-----ESSNINRKLEWRTM 189
M++ H +++ +K + LI EF+ G L I E E+ IN R
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM---RQA 158
Query: 190 CQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP--KISDFGLA-KLSEKKESF 246
C+ GL+++H IVH DIKP NI+ KI DFGLA KL+ +
Sbjct: 159 CE-------GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLN--PDEI 206
Query: 247 ISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMM 283
+ + A T + APE+ R V +D+++ G++
Sbjct: 207 VKVTTA--TAEFAAPEIVDRE--PVGFYTDMWAIGVL 239
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 90 FSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV------NGEEFIN---EVASMSKTS 139
S LG G G V + + VA+K++ K + +N E+ + K +
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H ++ F ++ + ++ E M G L D+ + ++ KL + M
Sbjct: 73 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM-------LL 124
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++YLH I+H D+KP N+LL ED KI+DFG +K+ + S + L GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC--GT 178
Query: 256 IGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLSSEIYFPNSIY 311
Y+APEV G + D +S G+++ + G +VSL +I + Y
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKY 236
Query: 312 KHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
I ++ V+E+ ++ KK+++V +TE+
Sbjct: 237 NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 94 LGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTS-HVNVVSFLGFCY 151
LG G G+V ++G GR VAVK + + + E+ ++++ H NV+ + +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 77
Query: 152 EKKKRALIYEF-MPNGSLDQFIYDEESSNINRKLEWR-TMCQIAVGIARGLEYLHRGCNI 209
E R L + N +L + + S+ N KL+ + IA G+ +LH ++
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 210 RIVHFDIKPHNILL-------------GEDFCPKISDFGLA-KLSEKKESFISML-GARG 254
+I+H D+KP NIL+ E+ ISDFGL KL + SF + L G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 255 TIGYIAPEVF 264
T G+ APE+
Sbjct: 195 TSGWRAPELL 204
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MEPEVVTRYYRAPE 195
Query: 263 VFCRNFG-GVSHKSDVYSYGMMILEMVVGR 291
V G G D++S G ++ EMV +
Sbjct: 196 VI---LGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 90 FSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV------NGEEFIN---EVASMSKTS 139
S LG G G V + + VA+K++ K + +N E+ + K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H ++ F ++ + ++ E M G L D+ + ++ KL + M
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM-------LL 125
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++YLH I+H D+KP N+LL ED KI+DFG +K+ + S + L GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC--GT 179
Query: 256 IGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLSSEIYFPNSIY 311
Y+APEV G + D +S G+++ + G +VSL +I + Y
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKY 237
Query: 312 KHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
I ++ V+E+ ++ KK+++V +TE+
Sbjct: 238 NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 39/279 (13%)
Query: 90 FSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV------NGEEFIN---EVASMSKTS 139
S LG G G V + + VA+K++ K + +N E+ + K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H ++ F ++ + ++ E M G L D+ + ++ KL + M
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM-------LL 125
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++YLH I+H D+KP N+LL ED KI+DFG +K+ + ++ GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 256 IGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLSSEIYFPNSIY 311
Y+APEV G + D +S G+++ + G +VSL +I + Y
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKY 237
Query: 312 KHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
I ++ V+E+ ++ KK+++V +TE+
Sbjct: 238 NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 90 FSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV------NGEEFIN---EVASMSKTS 139
S LG G G V + + VA+K++ K + +N E+ + K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRTMCQIAVGIAR 198
H ++ F ++ + ++ E M G L D+ + ++ KL + M
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM-------LL 125
Query: 199 GLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKESFISMLGARGT 255
++YLH I+H D+KP N+LL ED KI+DFG +K+ + S + L GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLC--GT 179
Query: 256 IGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLSSEIYFPNSIY 311
Y+APEV G + D +S G+++ + G +VSL +I + Y
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT--SGKY 237
Query: 312 KHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
I ++ V+E+ ++ KK+++V +TE+
Sbjct: 238 NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 49/267 (18%)
Query: 93 KLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSKTSHVNVVSFLG 148
+LG+G F V + K+ G+ A ++ K++ ++ E H N+V
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCN 208
E+ LI++ + G L + I E + + + I + LE +
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVARE---------YYSEADASHCIQQILEAVLHCHQ 128
Query: 209 IRIVHFDIKPHNILLGEDF---CPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC 265
+ +VH ++KP N+LL K++DFGLA E ++ + G GT GY++PEV
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLR 186
Query: 266 RNFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP------NSIYKHIE---- 315
++ G D+++ G+++ ++VG Y P + +Y+ I+
Sbjct: 187 KDPYG--KPVDLWACGVILYILLVG--------------YPPFWDEDQHRLYQQIKAGAY 230
Query: 316 --PGNEFQLAGVVTEEEKEMAKKMILV 340
P E+ VT E K++ KM+ +
Sbjct: 231 DFPSPEWD---TVTPEAKDLINKMLTI 254
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 30 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 85
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 86 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 189
Query: 263 VFCRNFG-GVSHKSDVYSYGMMILEMVVGR 291
V G G D++S G ++ EMV +
Sbjct: 190 VI---LGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV------NGEEFIN-- 130
Y R S LG G G V + + VA+K++ K + +N
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 131 -EVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSL-DQFIYDEESSNINRKLEWRT 188
E+ + K +H ++ F ++ + ++ E M G L D+ + ++ KL +
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 189 MCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLG---EDFCPKISDFGLAKLSEKKES 245
M ++YLH I+H D+KP N+LL ED KI+DFG +K+ +
Sbjct: 129 M-------LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 246 FISMLGARGTIGYIAPEVFCR-NFGGVSHKSDVYSYGMMILEMVVGRK---NAEVKVSLS 301
++ GT Y+APEV G + D +S G+++ + G +VSL
Sbjct: 179 MRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 302 SEIYFPNSIYKHIEPGNEFQLAGVVTEEEKEMAKKMILVLEMLEGSTED 350
+I + Y I ++ V+E+ ++ KK+++V +TE+
Sbjct: 236 DQIT--SGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEE 277
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 113 VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA------LIYEFM 163
VAVK L ++ + + E+ + +H N++S L +K L+ E M
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 164 PNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL 223
+ +L Q I+ E L ++ +C G+++LH I+H D+KP NI++
Sbjct: 110 -DANLCQVIHMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVV 157
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKS--DVYSYG 281
D KI DFGLA+ + + R Y APEV G+ +K D++S G
Sbjct: 158 KSDCTLKILDFGLARTASTNFMMTPYVVTR---YYRAPEVIL----GMGYKENVDIWSVG 210
Query: 282 MMILEMVVG 290
++ E+V G
Sbjct: 211 CIMGELVKG 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 41 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 96
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 97 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 147 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MTPYVVTRYYRAPE 200
Query: 263 VFCRNFG-GVSHKSDVYSYGMMILEMVVGR 291
V G G D++S G ++ EMV +
Sbjct: 201 VI---LGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNS---KVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G G +G V + G+ VA+K + N+ N + + E+ + H N+++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 150 CY------EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E K ++ + M L Q I+ ++ L + + RGL+Y+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS------SQPLTLEHVRYFLYQLLRGLKYM 174
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAP 261
H + +++H D+KP N+L+ E+ KI DFG+A+ + E M T Y AP
Sbjct: 175 H---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVVGRK 292
E+ + + D++S G + EM+ R+
Sbjct: 232 ELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 95 GQGGFGSVYKGKLPDGRLVAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
QG + Y L R VA+K L ++ + + E+ M +H N++ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 91
Query: 152 EKKKRALIYEFMPNGSLDQF-----IYDEESSN----INRKLEWRTMCQIAVGIARGLEY 202
F P SL++F + + +N I +L+ M + + G+++
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
LH I+H D+KP NI++ D KI DFGLA+ + SF+ M T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFM-MEPEVVTRYYRAPE 195
Query: 263 VFCRNFG-GVSHKSDVYSYGMMILEMVVGR 291
V G G D++S G ++ EMV +
Sbjct: 196 VI---LGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 94 LGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
+G G FG + + K LVAVK ++ + E E+ + H N+V F
Sbjct: 26 IGSGNFGVARLMRDKQ-SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLEWRTMCQIAVGIARGLEYLHRGCNI 209
A++ E+ G L + I N R + E R Q + G+ Y H +
Sbjct: 85 TPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---M 133
Query: 210 RIVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
++ H D+K N LL P KI DFG +K S S + GT YIAPEV +
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKK 190
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ G +DV+S G+ + M+VG
Sbjct: 191 EYDG--KVADVWSCGVTLYVMLVG 212
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 194
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 195 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 46/257 (17%)
Query: 75 PKRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKL-PDGRLVAVKVLK--NSKVNGEEFI 129
PKR Y+ +++ F K LG+G +G V P G +VA+K ++ + + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 130 NEVASMSKTSHVNVVSFLGF----CYEKKKRALIYEFMPNGSLDQFIYDEESSNIN-RKL 184
E+ + H N+++ +E I + + L + I + S+ + +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----- 239
++T+ R ++ LH G N+ +H D+KP N+L+ + K+ DFGLA++
Sbjct: 118 IYQTL--------RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 240 ---SEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
SE M T Y APEV + S DV+S G ++ E+ + R
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRP---- 221
Query: 297 KVSLSSEIYFPNSIYKH 313
FP Y+H
Sbjct: 222 --------IFPGRDYRH 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 94 LGQGGFGSVYKGKLP-DGRLVAVKVLKNS---KVNGEEFINEVASMSKTSHVNVVSFLGF 149
+G G +G V + G+ VA+K + N+ N + + E+ + H N+++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 150 CY------EKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
E K ++ + M L Q I+ ++ L + + RGL+Y+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS------SQPLTLEHVRYFLYQLLRGLKYM 175
Query: 204 HRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAK--LSEKKESFISMLGARGTIGYIAP 261
H + +++H D+KP N+L+ E+ KI DFG+A+ + E M T Y AP
Sbjct: 176 H---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 262 EVFCRNFGGVSHKSDVYSYGMMILEMVVGRK 292
E+ + + D++S G + EM+ R+
Sbjct: 233 ELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 28/188 (14%)
Query: 113 VAVKVLK---NSKVNGEEFINEVASMSKTSHVNVVSFLGFCYEKKKRA------LIYEFM 163
VAVK L ++ + + E+ + +H N++S L +K L+ E M
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 164 PNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILL 223
+ +L Q I+ E L ++ +C G+++LH I+H D+KP NI++
Sbjct: 112 -DANLCQVIHMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVV 159
Query: 224 GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFG-GVSHKSDVYSYGM 282
D KI DFGLA+ + + R Y APEV G G + D++S G
Sbjct: 160 KSDCTLKILDFGLARTACTNFMMTPYVVTR---YYRAPEVI---LGMGYAANVDIWSVGC 213
Query: 283 MILEMVVG 290
++ E+V G
Sbjct: 214 IMGELVKG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 46/257 (17%)
Query: 75 PKRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKL-PDGRLVAVKVLK--NSKVNGEEFI 129
PKR Y+ +++ F K LG+G +G V P G +VA+K ++ + + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 130 NEVASMSKTSHVNVVSFLGF----CYEKKKRALIYEFMPNGSLDQFIYDEESSNIN-RKL 184
E+ + H N+++ +E I + + L + I + S+ + +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----- 239
++T+ R ++ LH G N+ +H D+KP N+L+ + K+ DFGLA++
Sbjct: 118 IYQTL--------RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 240 ---SEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
SE M+ T Y APEV + S DV+S G ++ E+ + R
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRP---- 221
Query: 297 KVSLSSEIYFPNSIYKH 313
FP Y+H
Sbjct: 222 --------IFPGRDYRH 230
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 40/255 (15%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEE------FINEVASMSKTSHVNVVSF 146
K+G+G +G+V+K K + + LK +++ ++ + E+ + + H N+V
Sbjct: 9 KIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 147 LGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYLHRG 206
+ KK L++EF + L ++ + N L+ + + +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYF-----DSCNGDLDPEIVKSFLFQLLKGLGFCH-- 118
Query: 207 CNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFCR 266
+ ++H D+KP N+L+ + K+++FGLA+ S T+ Y P+V
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS--AEVVTLWYRPPDVL-- 173
Query: 267 NFGG--VSHKSDVYSYGMMILEMV-VGRKNAEVKVSLSSEIYFP-NSIYKHIEPGNEFQL 322
FG S D++S G + E+ GR FP N + ++ F+L
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELANAGRP------------LFPGNDVDDQLK--RIFRL 218
Query: 323 AGVVTEEEKEMAKKM 337
G TEE+ K+
Sbjct: 219 LGTPTEEQWPSMTKL 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 46/257 (17%)
Query: 75 PKRYNYSDVKRMTNSFSNK--LGQGGFGSVYKGKL-PDGRLVAVKVLK--NSKVNGEEFI 129
PKR Y+ +++ F K LG+G +G V P G +VA+K ++ + + +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 130 NEVASMSKTSHVNVVSFLGF----CYEKKKRALIYEFMPNGSLDQFIYDEESSNIN-RKL 184
E+ + H N+++ +E I + + L + I + S+ + +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 185 EWRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKL----- 239
++T+ R ++ LH G N+ +H D+KP N+L+ + K+ DFGLA++
Sbjct: 118 IYQTL--------RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 240 ---SEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAEV 296
SE M T Y APEV + S DV+S G ++ E+ + R
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRP---- 221
Query: 297 KVSLSSEIYFPNSIYKH 313
FP Y+H
Sbjct: 222 --------IFPGRDYRH 230
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I +M G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYQMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+++ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPEIIISK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 42/236 (17%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYK--GKLPDGRLVAVKVLKNSKVNGE------EFINEVA 133
DV + LG+G FG V + GR VAVK++KN E + + +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
+ S V L + +++E + L + + +E+ + +L+ + ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLD--HIRKMA 124
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKIS--------------DF 234
I + + +LH ++ H D+KP NIL E + PKI DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 235 GLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
G A ++ S +++ R Y APEV G S DV+S G +++E +G
Sbjct: 182 GSATYDDEHHS--TLVSTR---HYRAPEVILA--LGWSQPCDVWSIGCILIEYYLG 230
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 85 RMTNSFSN--KLGQGGFGSVYKG-KLPDGRLVAVKVLKNS---KVNGEEFINEV-ASMSK 137
R T F K+G G FGSV+K K DG + A+K K V+ + + EV A
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
H +VV + E + E+ GSL I E+ I + + + + +
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVG 121
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-------------------KISDFG-LA 237
RGL Y+H ++ +VH DIKP NI + P KI D G +
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
Query: 238 KLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMIL 285
++S + G ++A EV N+ + K+D+++ + ++
Sbjct: 179 RISSPQVE-------EGDSRFLANEVLQENYTHLP-KADIFALALTVV 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---- 220
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APE+ G + D ++ G++I EM G
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 94 LGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
+G G FG + + K LVAVK ++ + E+ + H N+V F
Sbjct: 27 IGSGNFGVARLMRDKQ-SNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLEWRTMCQIAVGIARGLEYLHRGCNI 209
A++ E+ G L + I N R + E R Q + G+ Y H +
Sbjct: 86 TPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---M 134
Query: 210 RIVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
++ H D+K N LL P KI DFG +K S S + GT YIAPEV +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKK 191
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ G +DV+S G+ + M+VG
Sbjct: 192 EYDG--KVADVWSCGVTLYVMLVG 213
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 85 RMTNSFSN--KLGQGGFGSVYKG-KLPDGRLVAVKVLKNS---KVNGEEFINEV-ASMSK 137
R T F K+G G FGSV+K K DG + A+K K V+ + + EV A
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
H +VV + E + E+ GSL I E+ I + + + + +
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVG 123
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-------------------KISDFG-LA 237
RGL Y+H ++ +VH DIKP NI + P KI D G +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 238 KLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMIL 285
++S + G ++A EV N+ + K+D+++ + ++
Sbjct: 181 RISSPQVE-------EGDSRFLANEVLQENYTHLP-KADIFALALTVV 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 85 RMTNSFS--NKLGQGGFGSVYKG--KLPDGRLVAVKVLKNSKVNG---EEFINEVASMSK 137
R T+ + +LG+G F V + K P A K++ K++ ++ E
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAA-KIINTKKLSARDHQKLEREARICRL 86
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
H N+V E+ L+++ + G L + I + R E+ + + I
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAR--EYYSEADASHCIH 137
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDF---CPKISDFGLAKLSEKKESFISMLGARG 254
+ LE ++ IVH D+KP N+LL K++DFGLA + ++ + G G
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAG 195
Query: 255 TIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
T GY++PEV ++ G D+++ G+++ ++VG
Sbjct: 196 TPGYLSPEVLRKDPYG--KPVDIWACGVILYILLVG 229
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 85 RMTNSFSN--KLGQGGFGSVYKG-KLPDGRLVAVKVLKNS---KVNGEEFINEV-ASMSK 137
R T F K+G G FGSV+K K DG + A+K K V+ + + EV A
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
H +VV + E + E+ GSL I E+ I + + + + +
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVG 125
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-------------------KISDFG-LA 237
RGL Y+H ++ +VH DIKP NI + P KI D G +
Sbjct: 126 RGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
Query: 238 KLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMIL 285
++S + G ++A EV N+ + K+D+++ + ++
Sbjct: 183 RISSPQVE-------EGDSRFLANEVLQENYTHLP-KADIFALALTVV 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A IA L YLH ++ IV+ D+KP NILL ++DFGL K + + S S
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC- 200
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+APEV + D + G ++ EM+ G
Sbjct: 201 -GTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYG 235
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 85 RMTNSFSN--KLGQGGFGSVYKG-KLPDGRLVAVKVLKNS---KVNGEEFINEV-ASMSK 137
R T F K+G G FGSV+K K DG + A+K K V+ + + EV A
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 138 TSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIA 197
H +VV + E + E+ GSL I E+ I + + + + +
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLLQVG 123
Query: 198 RGLEYLHRGCNIRIVHFDIKPHNILLGEDFCP-------------------KISDFG-LA 237
RGL Y+H ++ +VH DIKP NI + P KI D G +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 238 KLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMIL 285
++S + G ++A EV N+ + K+D+++ + ++
Sbjct: 181 RISSPQVE-------EGDSRFLANEVLQENYTHLP-KADIFALALTVV 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 85 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 136
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT+
Sbjct: 137 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 248
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 249 --LHAIIDPNHEIEFPDIPEKDLQDVLK 274
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 42/236 (17%)
Query: 82 DVKRMTNSFSNKLGQGGFGSVYK--GKLPDGRLVAVKVLKNSKVNGE------EFINEVA 133
DV + LG+G FG V + GR VAVK++KN E + + +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 134 SMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIA 193
+ S V L + +++E + L + + +E+ + +L+ + ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLD--HIRKMA 124
Query: 194 VGIARGLEYLHRGCNIRIVHFDIKPHNILL-----GEDFCPKIS--------------DF 234
I + + +LH ++ H D+KP NIL E + PKI DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 235 GLAKLSEKKESFISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
G A ++ S +++ R Y APEV G S DV+S G +++E +G
Sbjct: 182 GSATYDDEHHS--TLVXXR---HYRAPEVILA--LGWSQPCDVWSIGCILIEYYLG 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 80 YSDVKRMTNSFSNKLGQGGFGSVYKG-KLPDGRLVAVKVL-KNSKVNGEEFINEVASMSK 137
+ D+ ++T+ LG+G + V L +G+ AVK++ K + + EV ++ +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 138 TS-HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGI 196
+ N++ + F + + L++E + GS+ I ++ N R ++ +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE------REASRVVRDV 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILL--GEDFCP-KISDFGLA---KLSEKKESFIS-- 248
A L++LH I H D+KP NIL E P KI DF L KL+ +
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 249 MLGARGTIGYIAP---EVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+ G+ Y+AP EVF + D++S G+++ M+ G
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 66 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 117
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT+
Sbjct: 118 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 229
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 230 --LHAIIDPNHEIEFPDIPEKDLQDVLK 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 113 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 164
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT+
Sbjct: 165 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 276
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 277 --LHAIIDPNHEIEFPDIPEKDLQDVLK 302
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 9 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 68
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 69 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 120
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT+
Sbjct: 121 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 232
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 233 --LHAIIDPNHEIEFPDIPEKDLQDVLK 258
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 94 LGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTS-HVNVVSFLGFCY 151
LG G G+V ++G GR VAVK + + + E+ ++++ H NV+ + +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 95
Query: 152 EKKKRALIYEF-MPNGSLDQFIYDEESSNINRKLEWR-TMCQIAVGIARGLEYLHRGCNI 209
E R L + N +L + + S+ N KL+ + IA G+ +LH ++
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 210 RIVHFDIKPHNILL-------------GEDFCPKISDFGLA-KLSEKKESFISML-GARG 254
+I+H D+KP NIL+ E+ ISDFGL KL + F L G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 255 TIGYIAPEVF 264
T G+ APE+
Sbjct: 213 TSGWRAPELL 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT Y+AP + G + D ++ G++I EM G
Sbjct: 200 -GTPEYLAPAIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 94 LGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTS-HVNVVSFLGFCY 151
LG G G+V ++G GR VAVK + + + E+ ++++ H NV+ + +C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 95
Query: 152 EKKKRALIYEF-MPNGSLDQFIYDEESSNINRKLEWR-TMCQIAVGIARGLEYLHRGCNI 209
E R L + N +L + + S+ N KL+ + IA G+ +LH ++
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 210 RIVHFDIKPHNILL-------------GEDFCPKISDFGLA-KLSEKKESFISML-GARG 254
+I+H D+KP NIL+ E+ ISDFGL KL + F L G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 255 TIGYIAPEVF 264
T G+ APE+
Sbjct: 213 TSGWRAPELL 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 5 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 64
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 65 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 116
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT+
Sbjct: 117 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 228
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 229 --LHAIIDPNHEIEFPDIPEKDLQDVLK 254
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 94 LGQGGFGSV-YKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTS-HVNVVSFLGFCY 151
LG G G+V ++G GR VAVK + + + E+ ++++ H NV+ + +C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA--LMEIKLLTESDDHPNVIRY--YCS 77
Query: 152 EKKKRALIYEF-MPNGSLDQFIYDEESSNINRKLEWR-TMCQIAVGIARGLEYLHRGCNI 209
E R L + N +L + + S+ N KL+ + IA G+ +LH ++
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 210 RIVHFDIKPHNILL-------------GEDFCPKISDFGLA-KLSEKKESFISML-GARG 254
+I+H D+KP NIL+ E+ ISDFGL KL + F L G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 255 TIGYIAPEVF 264
T G+ APE+
Sbjct: 195 TSGWRAPELL 204
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 35/269 (13%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSK-T 138
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 139 SHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVG 195
H + + L + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 113 QHSDKIIRL-YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------ 164
Query: 196 IARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGT 255
LE +H IVH D+KP N L+ + K+ DFG+A + + + GT
Sbjct: 165 ----LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 256 IGYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYF 306
+ Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--- 276
Query: 307 PNSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 277 ---LHAIIDPNHEIEFPDIPEKDLQDVLK 302
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 126
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 179
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 180 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR----VY 180
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+P + R + V+S G+++ +MV G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 181
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 182 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 127
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 180
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 181 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 33/268 (12%)
Query: 83 VKRMTNSFSNKLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGE---EFINEVASMSKTS 139
VK S ++G GG V++ ++ A+K + + + + + NE+A ++K
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 140 HVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNIN---RKLEWRTMCQIAVGI 196
+ + YE + IY M G++D + ++ +I+ RK W+ M
Sbjct: 85 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM------- 136
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
LE +H IVH D+KP N L+ + K+ DFG+A + + GT+
Sbjct: 137 ---LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 257 GYIAPEVF-----CRNFG----GVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFP 307
Y+ PE R G +S KSDV+S G ++ M G+ + ++ S+
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---- 248
Query: 308 NSIYKHIEPGNEFQLAGVVTEEEKEMAK 335
++ I+P +E + + ++ +++ K
Sbjct: 249 --LHAIIDPNHEIEFPDIPEKDLQDVLK 274
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 181
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 182 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 176
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 177 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 208
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 170
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 223
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 224 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 176
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 177 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 142
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 195
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 196 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 143
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR----VY 195
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+P + R + V+S G+++ +MV G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 209
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 143
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 196
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 197 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 143
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 196
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 197 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 142
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 195
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 196 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 150
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR----VY 202
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+P + R + V+S G+++ +MV G
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR---VYS 176
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 177 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 209
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 170
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 223
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 224 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 41/267 (15%)
Query: 93 KLGQGGFGSVYKGKLPDGRLVAVKVLKNSKVNGEEF--INEVASMSKTSHVNVVSF--LG 148
K+G+G +G VYK K DG+ LK + G E+A + + H NV+S +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 149 FCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRK---LEWRTMCQIAVGIARGLEYLHR 205
+ +K L++++ L I +S N+K L + + I G+ YLH
Sbjct: 88 LSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 206 GCNIRIVHFDIKPHNIL-LGEDFCP-----KISDFGLAKL-SEKKESFISMLGARGTIGY 258
++H D+KP NIL +GE P KI+D G A+L + + + T Y
Sbjct: 147 NW---VLHRDLKPANILVMGEG--PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 259 IAPEVFCRNFGGVSHKS---DVYSYGMMILEMVVGR-----KNAEVKVSLSSEIYFPNSI 310
APE+ G H + D+++ G + E++ + ++K S +
Sbjct: 202 RAPELLL----GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS---------NP 248
Query: 311 YKHIEPGNEFQLAGVVTEEEKEMAKKM 337
Y H + F + G +++ E KKM
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKM 275
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 208
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 48/242 (19%)
Query: 94 LGQGGFGSVYKGKLPDGRLV-AVKVLKNSKV------NGEEFINEVASMSKTSHVNVVSF 146
+GQG +G V R + A+K++ +K+ + E EV M K H N+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 147 LGFCYEKKKRALIYEFMPNG----SLDQFIYD---------------------EESSN-- 179
+++ L+ E G L+ FI D EE+ N
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 180 ---INRKLEW----RTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGED--FCPK 230
L++ + + I I L YLH N I H DIKP N L + F K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK 210
Query: 231 ISDFGLAKLSEKKES--FISMLGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMV 288
+ DFGL+K K + + M GT ++APEV K D +S G+++ ++
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 289 VG 290
+G
Sbjct: 271 MG 272
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 209
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 94 LGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
+G G FG + + K LVAVK ++ + E E+ + H N+V F
Sbjct: 27 IGSGNFGVARLMRDKQ-SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLEWRTMCQIAVGIARGLEYLHRGCNI 209
A++ E+ G L + I N R + E R Q + G+ Y H +
Sbjct: 86 TPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---M 134
Query: 210 RIVHFDIKPHNILLGEDFCP--KISDFGLAKLSEKKESFISMLGARGTIGYIAPEVFC-R 266
++ H D+K N LL P KI FG +K S S + GT YIAPEV +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKK 191
Query: 267 NFGGVSHKSDVYSYGMMILEMVVG 290
+ G +DV+S G+ + M+VG
Sbjct: 192 EYDG--KVADVWSCGVTLYVMLVG 213
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 209
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 208
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR---VYS 208
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
PE + R + V+S G+++ +MV G
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 162
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR----VY 214
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+P + R + V+S G+++ +MV G
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 30/211 (14%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 144 VSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVGIARGLEYL 203
+ L + LI E P D F + E + +L Q+ LE +
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 175
Query: 204 HRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYI 259
N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFDGTR----VY 227
Query: 260 APEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
+P + R + V+S G+++ +MV G
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 82 DVKRMTN-SFSNKLGQGGFGSVY----KGKLPDGRLVAVKVLKNSKVNGEEFIN----EV 132
D ++T+ +F LG+G FG V KG L AVK+LK V ++ + E
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEK 71
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
++ ++ L C++ R + E++ G L I + R E +
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVF- 125
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
A IA GL +L + I++ D+K N++L + KI+DFG+ K E ++
Sbjct: 126 YAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 180
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAE 295
GT YIAPE+ G S D +++G+++ EM+ G+ E
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKS--VDWWAFGVLLYEMLAGQAPFE 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 44/265 (16%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVL-KNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
LG+G F K + AVK++ K + N ++ I + H N+V +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE--GHPNIVKLHEVFH 76
Query: 152 EKKKRALIYEFMPNGSLDQFI------YDEESSNINRKLEWRTMCQIAVGIARGLEYLHR 205
++ L+ E + G L + I + E+S I RKL + ++H
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL------------VSAVSHMH- 123
Query: 206 GCNIRIVHFDIKPHNILL---GEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
++ +VH D+KP N+L ++ KI DFG A+L K + T+ Y APE
Sbjct: 124 --DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPE 179
Query: 263 VFCRNFGGVSHKSDVYSYGMMILEMVVGR---KNAEVKVSLSSEIYFPNSIYKHIEPGNE 319
+ +N G D++S G+++ M+ G+ ++ + ++ +S + I K I+ G +
Sbjct: 180 LLNQN--GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV----EIMKKIKKG-D 232
Query: 320 FQLAGV----VTEEEKEMAKKMILV 340
F G V++E K++ + ++ V
Sbjct: 233 FSFEGEAWKNVSQEAKDLIQGLLTV 257
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 193 AVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGA 252
A I EYLH ++ +++ D+KP N+L+ + +++DFG AK + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 253 RGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT +APE+ G + D ++ G++I EM G
Sbjct: 200 -GTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSKV-------NGEEFINEVASMSKTSH--VNV 143
LG GGFGSVY G ++ D VA+K ++ ++ NG EV + K S V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 144 VSFLGFCYEKKKRALIYEFM-PNGSLDQFIYDEES--SNINRKLEWRTMCQIAVGIARGL 200
+ L + LI E M P L FI + + + R W+ L
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-----------L 124
Query: 201 EYLHRGCNIRIVHFDIKPHNILL----GEDFCPKISDFGLAKLSEKKESFISMLGARGTI 256
E + N ++H DIK NIL+ GE K+ DFG L K + G R
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALL-KDTVYTDFDGTR--- 177
Query: 257 GYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
Y PE + R + V+S G+++ +MV G
Sbjct: 178 VYSPPE-WIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 94 LGQGGFGSVYKG-KLPDGRLVAVKVLKNSK------VNGEEFINEVASMSKTSHVNVVSF 146
+G+G F V + G+ AVK++ +K ++ E+ E + H ++V
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 147 LGFCYEKKKRALIYEFMPNGSL---------DQFIYDEE-SSNINRKLEWRTMCQIAVGI 196
L +++EFM L F+Y E +S+ R+ I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ------------I 139
Query: 197 ARGLEYLHRGCNIRIVHFDIKPHNILLG--EDFCP-KISDFGLAKLSEKKESFISMLGAR 253
L Y H + I+H D+KP N+LL E+ P K+ DFG+A + ES + G
Sbjct: 140 LEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRV 194
Query: 254 GTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVG 290
GT ++APEV R G DV+ G+++ ++ G
Sbjct: 195 GTPHFMAPEVVKREPYG--KPVDVWGCGVILFILLSG 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 33/235 (14%)
Query: 70 YVSLAPKRYNYSDVKRMTNSFSNKLGQGGFGSVYKGKL-PDGRLVAVKVLKNSKVNGEEF 128
Y+++ +RY +++ + N ++G G G V+K + G ++AVK ++ S N EE
Sbjct: 12 YLTIGGQRYQ-AEINDLENL--GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG-NKEEN 67
Query: 129 INEVASMSKTSHVNVVSFLGFCYEKKKRALIYEFMPNGSLDQFIYDEESSNINRKLE--- 185
+ + + ++ C+ F+ N D FI E KL+
Sbjct: 68 KRILMDLDVVLKSHDCPYIVQCFGT--------FITN--TDVFIAMELMGTCAEKLKKRM 117
Query: 186 -----WRTMCQIAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLA-KL 239
R + ++ V I + L YL + +H D+KP NILL E K+ DFG++ +L
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRL 175
Query: 240 SEKKESFISMLGARGTIGYIAPEVF---CRNFGGVSHKSDVYSYGMMILEMVVGR 291
+ K S G Y+APE ++DV+S G+ ++E+ G+
Sbjct: 176 VDDKAKDRSA----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 94 LGQGGFG--SVYKGKLPDGRLVAVKVLKNSKVNGEEFINEVASMSKTSHVNVVSFLGFCY 151
+G G FG + + K LVAVK ++ + E E+ + H N+V F
Sbjct: 27 IGSGNFGVARLMRDKQ-SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 152 EKKKRALIYEFMPNGSLDQFIYDEESSNINR--KLEWRTMCQIAVGIARGLEYLHRGCNI 209
A++ E+ G L + I N R + E R Q + G+ Y H +
Sbjct: 86 TPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---M 134
Query: 210 RIVHFDIKPHNILLGEDFCP--KISDFGLAKL----SEKKESFISMLGARGTIGYIAPEV 263
++ H D+K N LL P KI FG +K S+ K++ GT YIAPEV
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV-------GTPAYIAPEV 187
Query: 264 FC-RNFGGVSHKSDVYSYGMMILEMVVG 290
+ + G +DV+S G+ + M+VG
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVG 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 82 DVKRMTN-SFSNKLGQGGFGSVY----KGKLPDGRLVAVKVLKNSKVNGEEFIN----EV 132
D ++T+ +F LG+G FG V KG L AVK+LK V ++ + E
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEK 392
Query: 133 ASMSKTSHVNVVSFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQ 191
++ ++ L C++ R + E++ G L I + R E +
Sbjct: 393 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVF- 446
Query: 192 IAVGIARGLEYLHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLG 251
A IA GL +L + I++ D+K N++L + KI+DFG+ K E ++
Sbjct: 447 YAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKX 501
Query: 252 ARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMMILEMVVGRKNAE 295
GT YIAPE+ G S D +++G+++ EM+ G+ E
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKS--VDWWAFGVLLYEMLAGQAPFE 543
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 39/262 (14%)
Query: 94 LGQGGFGSVYKGKLPDG-RLVAVKVLKNSKVNGEEFIN--EVASMSKTSHVNV------V 144
+G+G FG V K+ + R+ A+K+L N E + E A + V V +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKIL-----NKWEMLKRAETACFREERDVLVNGDCQWI 152
Query: 145 SFLGFCYEKKKRA-LIYEFMPNGSLDQFIYDEESSNINRKLEWRTMCQIAVG-IARGLEY 202
+ L + ++ + L+ ++ G L + S KL M + +G + ++
Sbjct: 153 TALHYAFQDENHLYLVMDYYVGGDLLTLL-----SKFEDKLP-EDMARFYIGEMVLAIDS 206
Query: 203 LHRGCNIRIVHFDIKPHNILLGEDFCPKISDFGLAKLSEKKESFISMLGARGTIGYIAPE 262
+H+ + VH DIKP N+LL + +++DFG + L + + A GT YI+PE
Sbjct: 207 IHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 263 VFCR---NFGGVSHKSDVYSYGMMILEMVVGRKNAEVKVSLSSEIYFPNSIYKHIEPGNE 319
+ G + D +S G+ + EM+ G E S + I H E
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYG----ETPFYAESLVETYGKIMNHEE---R 315
Query: 320 FQLAGVVT---EEEKEMAKKMI 338
FQ VT EE K++ +++I
Sbjct: 316 FQFPSHVTDVSEEAKDLIQRLI 337
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,564,801
Number of Sequences: 62578
Number of extensions: 398320
Number of successful extensions: 3202
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 301
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 1131
length of query: 386
length of database: 14,973,337
effective HSP length: 101
effective length of query: 285
effective length of database: 8,652,959
effective search space: 2466093315
effective search space used: 2466093315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)