Citrus Sinensis ID: 038769
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.944 | 0.371 | 0.649 | 4e-73 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.939 | 0.343 | 0.507 | 1e-54 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.939 | 0.346 | 0.507 | 2e-54 | |
| Q29491 | 240 | Aldehyde dehydrogenase, c | N/A | no | 0.913 | 0.75 | 0.531 | 4e-54 | |
| P24549 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.913 | 0.359 | 0.515 | 5e-54 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.923 | 0.364 | 0.505 | 2e-53 | |
| P51647 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.913 | 0.359 | 0.510 | 4e-53 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.923 | 0.363 | 0.510 | 9e-53 | |
| P48644 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.923 | 0.363 | 0.510 | 1e-52 | |
| O35945 | 501 | Aldehyde dehydrogenase, c | no | no | 0.913 | 0.359 | 0.505 | 1e-52 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 274 bits (700), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/194 (64%), Positives = 152/194 (78%), Gaps = 8/194 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQEGIYD+ +KLVEKAK W VGDPFD QGPQ++K+QF++ILSYIE GK EGAT+
Sbjct: 308 VFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK +G KGY+I+PTIF +V EDM I +DEIFGPVM LMKF ANN +YGL
Sbjct: 368 LTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI++ D++ NTVSRSI+AGIIW NCY FD DCPYGGYKMSG R+ G+D+L YL
Sbjct: 428 AAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQ 487
Query: 184 VKSVVTPIHNSPWL 197
KSVV P+HNSPW+
Sbjct: 488 TKSVVMPLHNSPWM 501
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Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 139/193 (72%), Gaps = 8/193 (4%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+V E +YDEF +K +A VVGDPF + QGPQI+ KQF++++ YI+SG + AT+
Sbjct: 346 FVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLE 405
Query: 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLA 124
GG +G KGY+I+PT+F+NVK+DMLIA+DEIFGPV ++KF+ AN +YGLA
Sbjct: 406 CGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLA 465
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHV 184
AG+ T +L+TAN VSR+++AG +W NC+ FD P+GGYKMSG GR+ G+ SL+ YL +
Sbjct: 466 AGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQI 525
Query: 185 KSVVTPIHNSPWL 197
K+VVT ++ W+
Sbjct: 526 KAVVTALNKPAWI 538
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 8/193 (4%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+V E +YDEF +K +A VGDPF + QGPQ++ +QF++IL YI+ G + GAT+
Sbjct: 342 FVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQ 401
Query: 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGLA 124
GG +G KGYYI+PT+F++VK+DMLIA DEIFGPV ++KF ANN RYGLA
Sbjct: 402 AGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLA 461
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHV 184
AG+ T +L+TA+ + R++R G +W NC+ D P+GGYKMSG GR+ G+ SL+ YL V
Sbjct: 462 AGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQV 521
Query: 185 KSVVTPIHNSPWL 197
K+VVT + N WL
Sbjct: 522 KAVVTSLKNPAWL 534
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q29491|ALDH2_MACPR Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 136/188 (72%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+D+I+ IESGKKEGA +
Sbjct: 48 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKIIDLIESGKKEGAKL 107
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KGY+I+PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 108 ECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTFYGL 167
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG +W NCY+A CP+GG+KMSG GR+ G LH+Y
Sbjct: 168 AAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTE 227
Query: 184 VKSVVTPI 191
VK+V I
Sbjct: 228 VKTVTMKI 235
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Elephant shrews, in contrast to other mammals, possess both a lens- and a non-lens specific class-1 aldehyde dehydrogenase. Can convert/oxidize retinaldehyde to retinoic acid. Macroscelides proboscideus (taxid: 29082) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 210 bits (534), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 135/188 (71%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V+E +YDEF K+ VE+AK +V+G+P P +NQGPQI+K+Q D+IL IESGKKEGA +
Sbjct: 309 IFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCY+ CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMKI 496
|
In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 135/190 (71%), Gaps = 8/190 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P + +NQGPQI+K+Q D+IL IESGKKEGA +
Sbjct: 308 LFVEESIYDEFVRRSVERAKKYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KGY+++PT+F+NV +DM IAK+EIFGPV +MKF ANN YGL
Sbjct: 368 ECGGGRWGNKGYFVQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTSYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCY+ CP+GG+KMSG GR+ G +++Y
Sbjct: 428 AAGVFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGIYEYTE 487
Query: 184 VKSVVTPIHN 193
+K+V I
Sbjct: 488 LKTVAIKISQ 497
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 134/188 (71%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V+E +YDEF +K VE+AK +V+G+P +NQGPQI+K+Q D+IL IESGKKEGA +
Sbjct: 309 IFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCY+ CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMKI 496
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Is capable of converting 9-cis and all-trans retinal to corresponding retinoic acid with high efficiency, 9-cis retinal being 2-fold more active than all-trans retinal. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 206 bits (524), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 134/190 (70%), Gaps = 8/190 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KGY+I+PT+F++V +DM IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+AGI TND++ A TVS ++++G +W NCY CP+GG+KMSG GR+ G H+Y
Sbjct: 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488
Query: 184 VKSVVTPIHN 193
VK+V I
Sbjct: 489 VKTVTIKISQ 498
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 134/190 (70%), Gaps = 8/190 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KGY+I+PT+F++V +DM IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+AGI TND++ A TVS ++++G +W NCY CP+GG+KMSG GR+ G H+Y
Sbjct: 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488
Query: 184 VKSVVTPIHN 193
VK+V I
Sbjct: 489 VKTVTIKISQ 498
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|O35945|AL1A7_MOUSE Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 136/188 (72%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +++G+P + +NQGPQI+K+Q ++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCYLA CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMQI 496
|
Can oxidize benzaldehyde, propionaldehyde and acetaldehyde (By similarity). No detectable activity with retinal. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.949 | 0.373 | 0.779 | 5e-86 | |
| 357500461 | 502 | Aldehyde dehydrogenase [Medicago truncat | 0.944 | 0.370 | 0.778 | 4e-85 | |
| 356531251 | 499 | PREDICTED: aldehyde dehydrogenase family | 0.944 | 0.372 | 0.757 | 4e-85 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.944 | 0.371 | 0.773 | 8e-85 | |
| 356523743 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.984 | 0.387 | 0.720 | 9e-84 | |
| 357518717 | 481 | Aldehyde dehydrogenase [Medicago truncat | 0.984 | 0.403 | 0.725 | 1e-83 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 0.984 | 0.386 | 0.720 | 2e-83 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 0.984 | 0.390 | 0.720 | 8e-83 | |
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.984 | 0.387 | 0.715 | 1e-82 | |
| 357500467 | 500 | Cytosolic aldehyde dehydrogenase [Medica | 0.959 | 0.378 | 0.741 | 4e-82 |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/195 (77%), Positives = 168/195 (86%), Gaps = 8/195 (4%)
Query: 11 NIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
+ VQEGIYDEFEKKLVEKAKAWVVGDPFDP V QGPQ++KKQF++ILSYIE GKKEGAT
Sbjct: 307 RVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGAT 366
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
+LTGGK VG KGYYIEPTIF+NVKEDMLI +DEIFGPVM LMKF ANN RYG
Sbjct: 367 LLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYG 426
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+GI+T L+TANTVSRSIRAGI+W NCY AF ND PYGGYKMSGFGRD G+++LHKYL
Sbjct: 427 LASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYL 486
Query: 183 HVKSVVTPIHNSPWL 197
VKSVVTPI+NSPWL
Sbjct: 487 QVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500461|ref|XP_003620519.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355495534|gb|AES76737.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/194 (77%), Positives = 169/194 (87%), Gaps = 8/194 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQEGIYDEFEKKLVEKAKAWVVGDPFDP V QGPQ++KKQF++ILSYIE GK +GAT+
Sbjct: 309 VFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKNDGATL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
LTGGK +G KGYYIEPTIF+NVKEDM IA+DEIFGPVM LMKF +ANN +YGL
Sbjct: 369 LTGGKKIGDKGYYIEPTIFSNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI+T +L+ ANTVSRSIRAGIIW NCY AF ND PYGGYKMSGFGRD GL+SLHKYL
Sbjct: 429 AAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQ 488
Query: 184 VKSVVTPIHNSPWL 197
VKSVVTPI+NSPWL
Sbjct: 489 VKSVVTPIYNSPWL 502
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531251|ref|XP_003534191.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 147/194 (75%), Positives = 171/194 (88%), Gaps = 8/194 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQEGIYDEFEK+LVEKAKAWVVGDPFDP V QGPQ++KKQF++ILSYIE GK+EGAT+
Sbjct: 306 VFVQEGIYDEFEKRLVEKAKAWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATL 365
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRRYGL 123
LTGGK VG KGYYIEPTIF+NVKEDMLIA+DEIFGPV+ LMKF +ANN RYGL
Sbjct: 366 LTGGKRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVIALMKFKTIEEAIKSANNSRYGL 425
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AG++T L+TANT+SRSIRAG++W NCY AF+ND PYGG KMSGFG+D GL++LHKYLH
Sbjct: 426 VAGVVTKSLDTANTMSRSIRAGVVWINCYFAFENDIPYGGCKMSGFGKDSGLEALHKYLH 485
Query: 184 VKSVVTPIHNSPWL 197
VKSVVTPI+NSPWL
Sbjct: 486 VKSVVTPIYNSPWL 499
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 150/194 (77%), Positives = 167/194 (86%), Gaps = 8/194 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQEGIYDEFEKKLVEKA AWVVGDPFDP V QGPQ++KKQF++ILSYIE GKKEGAT+
Sbjct: 308 VLVQEGIYDEFEKKLVEKANAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKEGATL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK VG KGYYIEPTIF+NVKEDMLI +DEIFGPVM LMKF ANN RYGL
Sbjct: 368 LTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
A+GI+T L+TANTVSRSIRAGI+W NCY AF +D PYGGYKMSGFGRD G+++LHKYL
Sbjct: 428 ASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGDDIPYGGYKMSGFGRDFGMEALHKYLQ 487
Query: 184 VKSVVTPIHNSPWL 197
VKSVVTPI+NSPWL
Sbjct: 488 VKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 10/204 (4%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
VC ++VQEGIYDEFEKKLVEKAKAWVVGDPFDP V QGPQ++K+QF+++LSYI
Sbjct: 300 EVCVASS--RVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYI 357
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF------- 114
E GKKEGAT+LTGGKTVG KGY+IEPTIF+N++EDMLIA+DEIFGPVM L KF
Sbjct: 358 EHGKKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTTEEAI 417
Query: 115 -NANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDC 173
+ANN +YGLAAGI+T +L+TANTVSRSIRAG IW NCY AF +D P+GGYKMSGFG+D
Sbjct: 418 KSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDH 477
Query: 174 GLDSLHKYLHVKSVVTPIHNSPWL 197
GL++LHKYL VKSVVTP++NSPWL
Sbjct: 478 GLEALHKYLQVKSVVTPLYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518717|ref|XP_003629647.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521041|ref|XP_003630809.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523669|gb|AET04123.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524831|gb|AET05285.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 171/204 (83%), Gaps = 10/204 (4%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
VC ++VQEGIYDEFEKKLVEKAK WV+GDPFDP V QGPQ++KKQF+++LSYI
Sbjct: 280 EVCVASS--RVFVQEGIYDEFEKKLVEKAKTWVIGDPFDPKVQQGPQVDKKQFEKVLSYI 337
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF------- 114
E GKKEGAT+LTGGKTVG KGYYIEPTIF+N+K+DM+IA+DEIFGPVM L KF
Sbjct: 338 EHGKKEGATLLTGGKTVGNKGYYIEPTIFSNIKDDMVIAQDEIFGPVMALKKFKTIEEAI 397
Query: 115 -NANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDC 173
+ANN RYGLAAGI+T +L+ ANTVSRSIRAG IW NCY AF +D P+GGYKMSGFGRD
Sbjct: 398 KSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWINCYFAFGDDIPFGGYKMSGFGRDY 457
Query: 174 GLDSLHKYLHVKSVVTPIHNSPWL 197
GL++LHKYL VKSVVTPI+NSPWL
Sbjct: 458 GLEALHKYLQVKSVVTPIYNSPWL 481
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 172/204 (84%), Gaps = 10/204 (4%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
VC + VQEGIYDEFEKKLVEKAKAWVVGDPFDP V QGPQ++K+QF+++LSYI
Sbjct: 301 EVCVASS--RVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYI 358
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF------- 114
E GKKEGAT+LTGGKTVG KGY+IEPTIF+N++EDMLIA+DEIFGPVM L KF
Sbjct: 359 EHGKKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTIEEAI 418
Query: 115 -NANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDC 173
+ANN +YGLAAGI+T +L+TANTVSRSIRAG IW NCY AF +D P+GGYKMSGFG+D
Sbjct: 419 KSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDH 478
Query: 174 GLDSLHKYLHVKSVVTPIHNSPWL 197
GL++LHKYL VKSVVTP++NSPWL
Sbjct: 479 GLEALHKYLQVKSVVTPLYNSPWL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 169/204 (82%), Gaps = 10/204 (4%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
VC ++VQEGIYDEFEKKLVEKAKAWVVGDPFDP V QGPQ++KKQF++ILSYI
Sbjct: 296 EVCVASS--RVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYI 353
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF------- 114
E GK+EGAT+LTGGK+VG KGYYIEPTIF+NVKEDMLI +DEIFGPVM L KF
Sbjct: 354 EHGKREGATLLTGGKSVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALKKFKTVEEAI 413
Query: 115 -NANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDC 173
+ANN RYGLAAGI+T +L+ ANTVSRSIRAG +W NCY A DND P+GGYK SGFG+D
Sbjct: 414 KSANNTRYGLAAGIMTKNLDIANTVSRSIRAGSVWINCYFAIDNDIPFGGYKASGFGKDY 473
Query: 174 GLDSLHKYLHVKSVVTPIHNSPWL 197
GL+++HKYL V SVVTPI+NSPWL
Sbjct: 474 GLEAIHKYLQVNSVVTPIYNSPWL 497
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 168/204 (82%), Gaps = 10/204 (4%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
VC +YVQEGIYDE KKLVEKAKAWVVGDPFDP V+QGPQ++K+Q+++ILSYI
Sbjct: 300 EVCVASS--RVYVQEGIYDEIVKKLVEKAKAWVVGDPFDPKVHQGPQVDKQQYEKILSYI 357
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF------- 114
E K EGAT+LTGGK++ +KGYYIEPTIF +++EDMLI KDEIFGPVM LMKF
Sbjct: 358 EHAKGEGATLLTGGKSLFEKGYYIEPTIFADLQEDMLIVKDEIFGPVMSLMKFKTIEEAI 417
Query: 115 -NANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDC 173
AN+ RYGLAAGI+T DLN ANTV+RSIRAG+IW NCY AFD DCPYGGYK SGFGRD
Sbjct: 418 KRANDTRYGLAAGIVTKDLNIANTVARSIRAGVIWVNCYFAFDQDCPYGGYKTSGFGRDF 477
Query: 174 GLDSLHKYLHVKSVVTPIHNSPWL 197
GL++LHKYL VKSVVTPI+NSPWL
Sbjct: 478 GLEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500467|ref|XP_003620522.1| Cytosolic aldehyde dehydrogenase [Medicago truncatula] gi|355495537|gb|AES76740.1| Cytosolic aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 166/197 (84%), Gaps = 8/197 (4%)
Query: 9 FPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG 68
+ ++VQEGIYDEFEKK++EKAK WVVGDPFDP V QGPQ +K QFD+ILSYI+ GK EG
Sbjct: 304 YSRVFVQEGIYDEFEKKVLEKAKNWVVGDPFDPKVQQGPQTSKAQFDKILSYIKHGKNEG 363
Query: 69 ATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF--------NANNRR 120
AT+LTGGK VG KGYYIEPTIFTNVK+DMLIA+DEIFGPVM L KF ANN +
Sbjct: 364 ATLLTGGKQVGNKGYYIEPTIFTNVKDDMLIAQDEIFGPVMALSKFKTIEEGIKKANNTK 423
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGLAAGI+T +L+ ANTVSRSIRAGIIW NCY AFD DCP+GGYKMSG+GRD GL++LHK
Sbjct: 424 YGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFDIDCPFGGYKMSGYGRDYGLEALHK 483
Query: 181 YLHVKSVVTPIHNSPWL 197
YL VKSV TPI+NSPWL
Sbjct: 484 YLQVKSVATPIYNSPWL 500
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 197 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.944 | 0.371 | 0.649 | 2.4e-67 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.939 | 0.343 | 0.507 | 3.1e-51 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.913 | 0.359 | 0.515 | 1.3e-50 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.939 | 0.346 | 0.507 | 1.7e-50 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.913 | 0.359 | 0.510 | 7.4e-50 | |
| UNIPROTKB|P48644 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.913 | 0.359 | 0.515 | 2e-49 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.913 | 0.362 | 0.521 | 3.2e-49 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.913 | 0.359 | 0.521 | 3.2e-49 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.913 | 0.359 | 0.505 | 3.2e-49 | |
| MGI|MGI:1347050 | 501 | Aldh1a7 "aldehyde dehydrogenas | 0.913 | 0.359 | 0.505 | 3.2e-49 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 126/194 (64%), Positives = 152/194 (78%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQEGIYD+ +KLVEKAK W VGDPFD QGPQ++K+QF++ILSYIE GK EGAT+
Sbjct: 308 VFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK +G KGY+I+PTIF +V EDM I +DEIFGPVM LMKF ANN +YGL
Sbjct: 368 LTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI++ D++ NTVSRSI+AGIIW NCY FD DCPYGGYKMSG R+ G+D+L YL
Sbjct: 428 AAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQ 487
Query: 184 VKSVVTPIHNSPWL 197
KSVV P+HNSPW+
Sbjct: 488 TKSVVMPLHNSPWM 501
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 98/193 (50%), Positives = 139/193 (72%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+V E +YDEF +K +A VVGDPF + QGPQI+ KQF++++ YI+SG + AT+
Sbjct: 346 FVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLE 405
Query: 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLA 124
GG +G KGY+I+PT+F+NVK+DMLIA+DEIFGPV ++KF+ AN +YGLA
Sbjct: 406 CGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLA 465
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHV 184
AG+ T +L+TAN VSR+++AG +W NC+ FD P+GGYKMSG GR+ G+ SL+ YL +
Sbjct: 466 AGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQI 525
Query: 185 KSVVTPIHNSPWL 197
K+VVT ++ W+
Sbjct: 526 KAVVTALNKPAWI 538
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 97/188 (51%), Positives = 135/188 (71%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V+E +YDEF K+ VE+AK +V+G+P P +NQGPQI+K+Q D+IL IESGKKEGA +
Sbjct: 309 IFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCY+ CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMKI 496
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 98/193 (50%), Positives = 134/193 (69%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+V E +YDEF +K +A VGDPF + QGPQ++ +QF++IL YI+ G + GAT+
Sbjct: 342 FVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQ 401
Query: 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLA 124
GG +G KGYYI+PT+F++VK+DMLIA DEIFGPV ++KF ANN RYGLA
Sbjct: 402 AGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLA 461
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHV 184
AG+ T +L+TA+ + R++R G +W NC+ D P+GGYKMSG GR+ G+ SL+ YL V
Sbjct: 462 AGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQV 521
Query: 185 KSVVTPIHNSPWL 197
K+VVT + N WL
Sbjct: 522 KAVVTSLKNPAWL 534
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 96/188 (51%), Positives = 134/188 (71%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V+E +YDEF +K VE+AK +V+G+P +NQGPQI+K+Q D+IL IESGKKEGA +
Sbjct: 309 IFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCY+ CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMKI 496
|
|
| UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 97/188 (51%), Positives = 134/188 (71%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KGY+I+PT+F++V +DM IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+AGI TND++ A TVS ++++G +W NCY CP+GG+KMSG GR+ G H+Y
Sbjct: 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488
Query: 184 VKSVVTPI 191
VK+V I
Sbjct: 489 VKTVTIKI 496
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 98/188 (52%), Positives = 132/188 (70%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+KKQ+++IL IESGKKEGA +
Sbjct: 304 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKL 363
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KG++I+PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 364 ECGGGPWGNKGFFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGL 423
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI T D++ A TVS +++AG +W NCY CP+GG+KMSG GR+ G L +Y
Sbjct: 424 AAGIFTKDIDKAITVSSALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTE 483
Query: 184 VKSVVTPI 191
VK V I
Sbjct: 484 VKMVTMKI 491
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 98/188 (52%), Positives = 132/188 (70%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+KKQ+++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KG++I+PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGFFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI T D++ A TVS +++AG +W NCY CP+GG+KMSG GR+ G L +Y
Sbjct: 429 AAGIFTKDIDKAITVSSALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTE 488
Query: 184 VKSVVTPI 191
VK V I
Sbjct: 489 VKMVTMKI 496
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| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 95/188 (50%), Positives = 132/188 (70%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V+E IYDEF ++ VE+AK +++G+P P V QGPQI+K+Q+D+IL IESGKKEGA +
Sbjct: 309 IFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KGY+++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+AG+ T D++ A T+S +++AG +W NCY CP+GG+KMSG GR+ G H+Y
Sbjct: 429 SAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488
Query: 184 VKSVVTPI 191
VK+V I
Sbjct: 489 VKTVTVKI 496
|
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| MGI|MGI:1347050 Aldh1a7 "aldehyde dehydrogenase family 1, subfamily A7" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 95/188 (50%), Positives = 136/188 (72%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +++G+P + +NQGPQI+K+Q ++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KG++++PT+F+NV ++M IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL+ A TVS +++AG++W NCYLA CP+GG+KMSG GR+ G L++Y
Sbjct: 429 AAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTE 488
Query: 184 VKSVVTPI 191
+K+V I
Sbjct: 489 LKTVAMQI 496
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pm.C_LG_XVIII000233 | coniferyl-aldehyde dehydrogenase (EC-1.2.1.68) (497 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.8531.4.1 | hypothetical protein (134 aa) | • | 0.899 | |||||||
 | gw1.22067.3.1 | annotation not avaliable (155 aa) | • | 0.899 | |||||||
 | Ptr4CL3 | SubName- Full=4-coumarate-CoA ligase; (541 aa) | • | 0.899 | |||||||
 | Ptr4CL4 | SubName- Full=Putative uncharacterized protein; (570 aa) | • | 0.899 | |||||||
 | f5h | SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa) | • | 0.899 | |||||||
 | SAD | SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa) | • | 0.899 | |||||||
 | ACLL14 | acyl-coa ligase (EC-6.2.1.12) (545 aa) | • | 0.899 | |||||||
 | eugene3.00071182 | SubName- Full=Ferulate 5-hydroxylase; (515 aa) | • | 0.899 | |||||||
 | Ptr4CL8 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | |||||||
 | ACLL12 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 197 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-127 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-97 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 2e-94 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 4e-92 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-87 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 2e-84 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 7e-79 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-76 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-75 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 3e-73 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 4e-71 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 6e-71 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-70 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 2e-70 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-66 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 2e-65 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 3e-64 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 5e-64 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 6e-64 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 3e-63 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 4e-63 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-63 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 2e-60 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 2e-59 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 6e-59 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-58 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 3e-57 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-56 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 2e-56 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 6e-55 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-54 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 8e-54 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 2e-53 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-52 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 4e-51 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 4e-51 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 4e-50 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-49 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-49 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-48 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 7e-48 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-47 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 2e-47 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 4e-47 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 5e-47 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 6e-47 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-46 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 3e-46 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-45 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 3e-45 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 8e-45 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-44 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-44 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 3e-43 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-43 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 3e-42 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-39 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-38 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 6e-38 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-37 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 2e-37 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 2e-37 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 2e-36 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-36 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 2e-36 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 7e-36 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 8e-36 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-35 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 8e-35 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 8e-35 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 9e-33 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-31 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 2e-31 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 4e-28 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 3e-27 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-27 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-26 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 8e-24 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 4e-23 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-22 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 4e-22 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-22 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-21 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-19 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-19 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-19 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-17 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-17 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-17 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 8e-15 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 9e-15 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-14 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 6e-14 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 7e-14 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 9e-14 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 1e-13 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 7e-13 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-12 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-11 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 6e-11 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-11 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 6e-09 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 9e-09 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 3e-08 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 3e-07 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-05 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-05 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 7e-04 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 367 bits (945), Expect = e-127
Identities = 145/194 (74%), Positives = 163/194 (84%), Gaps = 8/194 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YVQEGIYDEF KKLVEKAK WVVGDPFDP QGPQ++K+QF++ILSYIE GK+EGAT+
Sbjct: 308 VYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK G KGYYIEPTIFT+V EDM IA+DEIFGPVM LMKF ANN +YGL
Sbjct: 368 LTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAGI+T DL+ ANTVSRSIRAG IW NCY AFD DCP+GGYKMSGFGRD G+D+L KYL
Sbjct: 428 AAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ 487
Query: 184 VKSVVTPIHNSPWL 197
VKSVVTP++NSPWL
Sbjct: 488 VKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 290 bits (745), Expect = 1e-97
Identities = 106/185 (57%), Positives = 137/185 (74%), Gaps = 8/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+VQE IYDEF +K +A+ VVGDPFDP QGPQ++K QFD+ILSYIESGKKEGAT+
Sbjct: 291 IFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATL 350
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGG+ G KGY+I+PT+FT+VK+DM IAK+EIFGPV+ ++KF AN+ YGL
Sbjct: 351 LTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGL 410
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T D+N A VSR+++AG +W N Y FD P+GG+K SGFGR+ G + L +Y
Sbjct: 411 AAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQ 470
Query: 184 VKSVV 188
VK+V
Sbjct: 471 VKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 2e-94
Identities = 104/186 (55%), Positives = 140/186 (75%), Gaps = 8/186 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+V E IYDEF +K +A VVGDPF V QGPQ++K+QF++ILSYIE GK+EGAT+
Sbjct: 291 TFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATL 350
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+TGG +G KGYYI+PTIF++VK+DM IA+DEIFGPV ++KF ANN +YGL
Sbjct: 351 ITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGL 410
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ + +++TANT+SR+++AG +W NCY FD P+GGYKMSG GR+ G+ +L+ YL
Sbjct: 411 AAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQ 470
Query: 184 VKSVVT 189
VK+VV
Sbjct: 471 VKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 276 bits (709), Expect = 4e-92
Identities = 99/185 (53%), Positives = 126/185 (68%), Gaps = 8/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+VQE IYDEF K+ VE+AK VVG+PFDP QGPQI+++QF +IL IESGKKEGA +
Sbjct: 295 TFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKL 354
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GGK G KGY+I+PT+F++V +DM IAK+EIFGPV + KF ANN YGL
Sbjct: 355 ECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGL 414
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA + T D++ A T S ++RAG +W NCY P+GGYKMSG GR+ G L +Y
Sbjct: 415 AAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTE 474
Query: 184 VKSVV 188
VK+V
Sbjct: 475 VKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 267 bits (683), Expect = 1e-87
Identities = 111/197 (56%), Positives = 142/197 (72%), Gaps = 16/197 (8%)
Query: 13 YVQEGIYDEFEKKLVEKAKAW----VVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG 68
+V E +YDEF VEKAKA VVGDPF V QGPQI+ +QF++IL YI+SG + G
Sbjct: 346 FVHERVYDEF----VEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESG 401
Query: 69 ATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
AT+ GG G KGYYI+PT+F+NV++DMLIA+DEIFGPV ++KF ANN R
Sbjct: 402 ATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTR 461
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGLAAG+ T +L+TANT+SR++R G +W NC+ FD P+GGYKMSG GR+ G+ SL+
Sbjct: 462 YGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNN 521
Query: 181 YLHVKSVVTPIHNSPWL 197
YL VK+VVTP+ N WL
Sbjct: 522 YLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 2e-84
Identities = 90/185 (48%), Positives = 124/185 (67%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E IYDEF ++LVE AK+ VGDP DP + GP I+KKQ +R+LSYIE K+EGA +
Sbjct: 275 LLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKL 334
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG+ +KGY++EPT+ +V DM IA++EIFGPV+ ++ F AN+ YGL
Sbjct: 335 LCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGL 394
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYL 182
AAG+ TNDL A V+R + AG++W N Y D + P+GG+K SGFGR+ G + L +Y
Sbjct: 395 AAGVFTNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYT 454
Query: 183 HVKSV 187
K+V
Sbjct: 455 ETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 7e-79
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E IYDEF ++LVE+ KA VG+P DP + GP I+ Q DR+L+YIE K EGA +
Sbjct: 245 LLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKL 304
Query: 72 LTGGKTV-GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
L GGK + G KGY++ PT+ T+V DM IA++EIFGPV+ ++ F AN+ YG
Sbjct: 305 LCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYG 364
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKY 181
LAAG+ T DL A V+ + AG +W N Y P+GG K SG GR+ G L +Y
Sbjct: 365 LAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEY 424
Query: 182 LHVKSVVT 189
K+V
Sbjct: 425 TEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 1e-76
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 10/186 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E I DEF +K+V A+ W GDP DPA G +++ FD++L YIESGK EGA +
Sbjct: 275 LLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARL 334
Query: 72 LTGGKTVGQ--KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
+ GGK V G+++EPT+F V DM IA++EIFGPV+ ++ F+ AN+ Y
Sbjct: 335 VAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVY 394
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GLAA + T+DL+ A+ V+R +RAG +W NC+ D P+GG+K SG GRD L +L KY
Sbjct: 395 GLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKY 454
Query: 182 LHVKSV 187
+K+
Sbjct: 455 TELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 233 bits (598), Expect = 1e-75
Identities = 81/189 (42%), Positives = 117/189 (61%), Gaps = 12/189 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQ IYDEF ++LV +A+A VGDP DP GP ++Q +++ Y+ ++EGA V
Sbjct: 268 LLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARV 327
Query: 72 LTGGKTVG----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
LTGG+ GY+ EPTI +V DM IA++E+FGPV+ ++ F+ AN+
Sbjct: 328 LTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDS 387
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLAAGI T DL A+ V+R+I AG +W N Y A P+GG+K SG GR+ G++++
Sbjct: 388 EYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIR 447
Query: 180 KYLHVKSVV 188
+Y KSV
Sbjct: 448 EYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 3e-73
Identities = 99/184 (53%), Positives = 129/184 (70%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYVQEGIYD+F K+ EKAK VGDPF QGPQ+++ Q++RI+SYIESGK EGATV
Sbjct: 294 IYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATV 353
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
TGGK G +GY+IEPTIFT+V EDM I K+EIFGPV+ ++KF AN+ YGL
Sbjct: 354 ETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGL 413
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA + TN++N A V+ +++AG +W NCY + P+GGYK SG GR+ G +L Y
Sbjct: 414 AAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQ 473
Query: 184 VKSV 187
+K+V
Sbjct: 474 IKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 4e-71
Identities = 83/188 (44%), Positives = 117/188 (62%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I VQ IYDEF ++ VE+AKA VGDP DP GP I+K+ +++L Y+E + EGAT+
Sbjct: 266 ILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATI 325
Query: 72 LTGGKTVG----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
LTGG + GY++EPT+ T + D +A++EIFGPV+ ++ F+ AN+
Sbjct: 326 LTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDT 385
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLAA + T DL A+ V+R + AG +W NC+L D P+GG K SG GR+ G SL
Sbjct: 386 PYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLE 445
Query: 180 KYLHVKSV 187
Y +K+V
Sbjct: 446 FYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 221 bits (565), Expect = 6e-71
Identities = 86/184 (46%), Positives = 122/184 (66%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E IYDEF ++ A++ GDP DP GP +++ QFDR+L Y++ G++EGA +
Sbjct: 266 LLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARL 325
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK G +G+++EPTIF V +M IA++EIFGPV+ +M+F AN YGL
Sbjct: 326 LTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGL 385
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AAG+ T DL A+ V+ +++AG +W N Y FD P+GGYK SGFGR+ G ++L +Y
Sbjct: 386 AAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTE 445
Query: 184 VKSV 187
VKSV
Sbjct: 446 VKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 1e-70
Identities = 78/188 (41%), Positives = 114/188 (60%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQ+ I FE +L+E+ + +GDP DPA N GP ++ D++L YIE GK EGA +
Sbjct: 290 VFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARL 349
Query: 72 LTGGKTV----GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
L GG+ + G ++ PT+FT+ +DM I ++EIFGPVM ++ F+ AN+
Sbjct: 350 LCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDT 409
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLAAG+ T DL+ A+ V + AGI W N + + P GGYK SG GR+ G+ +L
Sbjct: 410 EYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLE 469
Query: 180 KYLHVKSV 187
Y +KSV
Sbjct: 470 HYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 2e-70
Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 12/186 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E +YDEF ++LV +A + VGDP DP+ + GP I+++Q DR+ YIE EGA +
Sbjct: 282 LIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARL 341
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GGK G GY++EPTI V DM IA++EIFGPV+ +++F AN+ YGL
Sbjct: 342 LAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGL 399
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYL--AFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
AA I T DL A V+R + AG++ N Y A P+GG K SG GR+ G L ++
Sbjct: 400 AAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEF 459
Query: 182 LHVKSV 187
VK+V
Sbjct: 460 TEVKTV 465
|
Length = 472 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 1e-66
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 10 PN-IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG 68
N IYV E IYDEF +KLVE+ K VG+ D + GP IN++ +++ + +E +G
Sbjct: 263 ANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKG 322
Query: 69 ATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
A VLTGGK +G GY+ EPT+ T+V +DMLI +E FGPV ++ F+ AN+
Sbjct: 323 AKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTP 382
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGLAA + T DL A V+ ++ AG++ N L D + P+GG K SG GR+ G + L +
Sbjct: 383 YGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEE 442
Query: 181 YLHVKSV 187
YL K V
Sbjct: 443 YLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 2e-65
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 13/189 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQ I DEF ++LVE+ K +GDP D G I+++ +++L YIES K+EGA V
Sbjct: 264 VFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKV 323
Query: 72 LTGGKTVGQK-----GYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN 118
L GG+ V + G+Y+ P + T+ +DM I ++EIFGPVM ++ F+ AN+
Sbjct: 324 LCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRAND 383
Query: 119 RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSL 178
YGLAAG+ T DL A+ V ++AG W N Y + P+GGYK SGFGR+ G +L
Sbjct: 384 TTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAAL 443
Query: 179 HKYLHVKSV 187
Y +K+V
Sbjct: 444 EHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 3e-64
Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V Y E E+ A+A+VVGDP DPA GP + QFDR+ YI+ G +EGA ++
Sbjct: 281 VPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVA 340
Query: 74 GG--KTVG-QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
GG + G ++GY+++PT+F +V DM IA++EIFGPV+ ++ ++ AN+ YG
Sbjct: 341 GGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYG 400
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA + + D A V+R +RAG + N AF+ P+GGYK SG GR+ G L ++L
Sbjct: 401 LAGYVWSADPERARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFL 459
Query: 183 HVKSVV 188
VKS+
Sbjct: 460 EVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 5e-64
Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V YDE + L +A VGDP DP GP I+ Q DR+ YI G+ EGA +
Sbjct: 272 LLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARL 331
Query: 72 LTGGKTV--GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
+TGG KG+Y+EPT+F +V DM IA++EIFGPV+V++ ++ AN+ Y
Sbjct: 332 VTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDY 391
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GL+ G+ + D++ A V+R IR G + N + D P+GGYK SG GR+ G++ L ++
Sbjct: 392 GLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEF 451
Query: 182 LHVKSVV 188
L KS+
Sbjct: 452 LETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 6e-64
Identities = 92/188 (48%), Positives = 119/188 (63%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAK-AWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
IYVQE IYD+F +K VE K + VG PFD GPQ++K Q+DR+LSYIE GKKEGA
Sbjct: 293 IYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK 352
Query: 71 VLTGG---KTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
++ GG KGY+I PTIFT+V +DM I K+EIFGPV+V+ KF AN+
Sbjct: 353 LVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDT 412
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLAA + T D+ A+ V+R + AG++W N D P+GG+KMSG GR+ G L
Sbjct: 413 TYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLE 472
Query: 180 KYLHVKSV 187
Y K+V
Sbjct: 473 TYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 3e-63
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V+E I+D+F L E+AK +G+ D GP ++ + +++LSYI+ GK+EGA +
Sbjct: 283 LLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARL 342
Query: 72 LTGGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
+ GGK KGY++EPTIF +V M I ++EIFGPV+ + +F+ AN+
Sbjct: 343 VCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDT 402
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLA + T D+ AN V+R +RAG +W N Y + + P+GGYK SG GR+ G L
Sbjct: 403 PYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLE 462
Query: 180 KYLHVKSVVTPIHNSP 195
+Y K + + P
Sbjct: 463 EYQETKHININLSPQP 478
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 201 bits (514), Expect = 4e-63
Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E I D F +V +++ VGDP DP G IN+ Q +I Y+++G+ EGAT+
Sbjct: 268 LLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATL 327
Query: 72 LTGGKTVGQ-KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
L GG+ + G + +PTIFT+V DM IA++EIFGPV+ ++ F+ AN+ YG
Sbjct: 328 LLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYG 387
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
L+AG+ + D++TA TV+R IRAG +W N +L + P+GG+K SG GR+ G + +Y
Sbjct: 388 LSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYT 447
Query: 183 HVKSV 187
+K+V
Sbjct: 448 ELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 4e-63
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V E I D F ++L A+A VGDP + V GP +++ Q++++LS+I GK+EGA +L
Sbjct: 271 VHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLC 330
Query: 74 GGK--TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG+ +KGY+I PT+F +V D I ++EIFGPV+ + F AN+ YGL
Sbjct: 331 GGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGL 390
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA +I+ D + V+ ++ AGI+W NC P+GGYK SG GR+ G L YL
Sbjct: 391 AAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLE 450
Query: 184 VKSVVT 189
VK +
Sbjct: 451 VKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 2e-60
Identities = 80/188 (42%), Positives = 111/188 (59%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
VQE IYDEF ++ VE+ +A VG+P DP G Q++K Q ++ILSY++ GK+EGA V
Sbjct: 289 ALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEV 348
Query: 72 LTGGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
LTGG+ KGY+ EPT+ DM I ++EIFGPV+ ++ F AN+
Sbjct: 349 LTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDT 408
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGL G+ T D+N A V+R I+ G +W NCY + P+GGYK SG GR+ L
Sbjct: 409 EYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLD 468
Query: 180 KYLHVKSV 187
Y K++
Sbjct: 469 HYQQTKNI 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 2e-59
Identities = 81/186 (43%), Positives = 125/186 (67%), Gaps = 10/186 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E I+DEF +++VE+ K +GDP D + + GPQ +K D+++ Y E G KEGAT+
Sbjct: 297 LFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATL 356
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRY 121
+ GGK V + G++ EPT+FT+V++ M IAK+E FGP+M++ KF+ AN+ Y
Sbjct: 357 VYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEY 416
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GLA+G+ T D+N A VS + AG ++ N Y D P+GG+K SGFG+D G ++L++Y
Sbjct: 417 GLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEY 476
Query: 182 LHVKSV 187
L K+V
Sbjct: 477 LKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 6e-59
Identities = 84/188 (44%), Positives = 115/188 (61%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+VQEGIYDEF KL EK + VG+P DP G Q+NK Q D+ILSY++ K+EGA +
Sbjct: 284 IFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKI 343
Query: 72 LTGGKTVGQ----KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
LTGG + + KG++IEPT+ NV DM +A++EIFGPV ++KF AN+
Sbjct: 344 LTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDS 403
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGL G+ T D+N A V+R++ G +W N Y P+GGYK SG GR+ L
Sbjct: 404 EYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLD 463
Query: 180 KYLHVKSV 187
Y +K++
Sbjct: 464 AYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 1e-58
Identities = 80/193 (41%), Positives = 113/193 (58%), Gaps = 10/193 (5%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V E I EF +KLV+ AK + DP + GP +++ Q++++L +I + K EGAT+L
Sbjct: 302 VHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILC 361
Query: 74 GGK--TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GGK +KG++IEPTI T+V M I ++E+FGPV+ + F+ AN+ YGL
Sbjct: 362 GGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGL 421
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
A +I+NDL VS + +AGI+W NC P+GG K SGFGR+ G L YL
Sbjct: 422 AGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS 481
Query: 184 VKSVVTPIHNSPW 196
VK V I + PW
Sbjct: 482 VKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 3e-57
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V + I + F +LVE+ + +GDPFD A GP I+ D++LSYIE GK EGAT+
Sbjct: 282 VFVHKKIKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATL 341
Query: 72 LTGGKTVG----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
TGG Q G+++EPT+F + +DM I ++EIFGPVM ++ F+ AN+
Sbjct: 342 ATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDT 401
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLA G+ T DL A+ V+ + AG +W N Y + + P+GGYK SG GR+ G +L
Sbjct: 402 EYGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALA 461
Query: 180 KYLHVK 185
Y VK
Sbjct: 462 HYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 1e-56
Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 3 VCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIE 62
VC I V YDE + L A VGDP DPA GP + +Q +R+ YI
Sbjct: 278 VCVA--LTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIA 335
Query: 63 SGKKEGATVLTGGKTVGQ--KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----- 115
G+ EGA ++TGG +G+++EPT+F +V DM IA++EIFGPV+ ++ ++
Sbjct: 336 KGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDA 395
Query: 116 ---ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRD 172
AN+ YGL+ + T D+ V+R IR G + N D P+GG+K SG GR+
Sbjct: 396 VRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGRE 454
Query: 173 CGLDSLHKYLHVKSVV 188
G + L YL KS+
Sbjct: 455 GGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 2e-56
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV E +YDEF LVE A VGDP D GP + Q +R+ ++E A V
Sbjct: 266 VYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE-RAPAHARV 324
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGG+ GY+ EPT+ V +D I ++EIFGPV+ + F+ AN+ YGL
Sbjct: 325 LTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGL 384
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
A+ + T D+ A +S + G +W N ++ + P+GG+K SG+G+D + +L Y
Sbjct: 385 ASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTR 444
Query: 184 VKSVVT 189
+K V+
Sbjct: 445 IKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 6e-55
Identities = 75/184 (40%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV E IYDEF + LV AKA VVGD DP GP NK Q+D++ +E K +GA V
Sbjct: 261 LYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKV 320
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG+ + GY+I PTI + E I +E FGPV+ ++K++ AN+ YGL
Sbjct: 321 LAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGL 380
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
A + ++DL A V+R + AG +W N + A D D P+GG+K SG G + G++ L +Y
Sbjct: 381 GASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQ 440
Query: 184 VKSV 187
+ +
Sbjct: 441 TQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 178 bits (455), Expect = 1e-54
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 14/184 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V E +YDEF +KLV KAKA VGDP DP GP IN++Q DR+ + +E GA +
Sbjct: 248 ILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARL 307
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGG G + +PT+ ++V DM I ++EIFGPV ++ F+ AN+ YGL
Sbjct: 308 LTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGL 364
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC--PYGGYKMSGFGRDCGLDSLHKY 181
+A + T DL A + + G++ N +++ P+GG K SG GR G SL ++
Sbjct: 365 SAAVFTRDLERAMAFAERLETGMVHIND-QTVNDEPHVPFGGVKASGGGRFGGPASLEEF 423
Query: 182 LHVK 185
+
Sbjct: 424 TEWQ 427
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 8e-54
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V EGI+D F + LVE+ KA VGD D V+ GP ++++Q ++ L YIE + EGA ++
Sbjct: 286 VTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVY 345
Query: 74 GGKTV--GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG+ + +GYY+ P +F V DM IA++EIFGPV +++ AN+ +GL
Sbjct: 346 GGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGL 405
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLA-FDNDCPYGGYKMSGFG-RDCGLDSLHKY 181
+AGI+T L A R + AG++ N A D P+GG K S +G R+ G +L Y
Sbjct: 406 SAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFY 465
Query: 182 LHVKSV 187
+K+V
Sbjct: 466 TTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-53
Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-AT 70
IY Q GIYD+ KL VGDP D GP I+ DR+ ++E K G
Sbjct: 286 IYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIR 345
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
V+TGG+ KGYY EPT+ ++D I + E+FGPV+ + F+ AN+ YG
Sbjct: 346 VVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYG 405
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+ + T D+ A+ VS ++ G W N + ++ P+GG K SG+G+D L L Y
Sbjct: 406 LASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYT 465
Query: 183 HVKSV 187
V+ V
Sbjct: 466 VVRHV 470
|
Length = 475 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 1e-52
Identities = 77/191 (40%), Positives = 115/191 (60%), Gaps = 20/191 (10%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+V E IYDE ++VE+ A VGDP DPA GP ++++Q+DR++ YI+S K+EGA ++
Sbjct: 266 FVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLV 325
Query: 73 TGGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
TGG + G+Y+EPT+F +V M IA++EIFGPV+ ++++ AN
Sbjct: 326 TGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVE 385
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANC----YLAFDNDCPYGGYKMSGFGRDCGLD 176
YGL A I TND++ A+ +R + AG +W N +L P+GG K SG GR+ L+
Sbjct: 386 YGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLG----APFGGVKNSGIGREECLE 441
Query: 177 SLHKYLHVKSV 187
L Y K+V
Sbjct: 442 ELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 4e-51
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
V E +YDEF +K VE A VGDP D + GP K D + +E GAT+
Sbjct: 244 FIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATL 303
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GGK G + PT+ T+V M +E+FGPV ++K AN+ +GL
Sbjct: 304 LLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGL 363
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+ T DL A V+R + AG+++ N + D P+GG K SG+GR+ G + ++++
Sbjct: 364 GGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVN 423
Query: 184 VKSVVT 189
+K+V
Sbjct: 424 IKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 4e-51
Identities = 81/191 (42%), Positives = 110/191 (57%), Gaps = 19/191 (9%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV E IYDEF +KLVEK KA VGDPFD A + GP +N+ D++ +E + GAT+
Sbjct: 282 VYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATL 341
Query: 72 LTGGKTV-GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
LTGGK G+KGY+ EPT+ TNV++DM I ++EIFGPV+ ++KF+ AN+ YG
Sbjct: 342 LTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYG 401
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANC-----YLAFDNDCPYGGYKMSGFGRDCGLDS 177
L + I T +LNTA + + G + N F G+K SG G G
Sbjct: 402 LTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHA-----GWKKSGLGGADGKHG 456
Query: 178 LHKYLHVKSVV 188
L +YL K V
Sbjct: 457 LEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 4e-50
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 14/189 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E +YDEF ++LVE+ KA VGDP DP V GP I+K DRI YIE GK EG +
Sbjct: 321 VIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RL 379
Query: 72 LTGGKT--VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
L GG+ + +GY+++PTIF +V D +A++EIFGPV+ ++K AN+ Y
Sbjct: 380 LLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEY 439
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFG-RDCGLDSL 178
GL G+ + R G ++AN A P+GG+KMSG G + G D L
Sbjct: 440 GLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYL 499
Query: 179 HKYLHVKSV 187
+++ K+V
Sbjct: 500 LQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 2e-49
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 15/197 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQE I ++F +KLVE+ +A VG P DP GP I+ + ++L Y+E+ +KEGAT+
Sbjct: 284 LLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATI 343
Query: 72 LTGGKTVGQ-------KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------A 116
L GG+ +G Y+ PT+FT M IA++EIFGPV+ ++ F A
Sbjct: 344 LVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKA 403
Query: 117 NNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLD 176
N+ RYGLA + TND+ A+ V+ ++ AG+IW N P+GG K SG GR+ G
Sbjct: 404 NDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTY 463
Query: 177 SLHKYLHVKSVVTPIHN 193
S Y K+V +
Sbjct: 464 SFDFYTETKNVALALGP 480
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 3e-49
Identities = 71/180 (39%), Positives = 100/180 (55%), Gaps = 18/180 (10%)
Query: 3 VCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIE 62
VC + Q I+V E IYDEF ++ V K VVGDP D + GP I++ + +RI ++E
Sbjct: 263 VCISVQ--RIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVE 320
Query: 63 SGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------- 115
+ GA +LTGGK G +EPT+ T+V DM + +E+F PV+ L F+
Sbjct: 321 EAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIA 377
Query: 116 -ANNRRYGLAAGIITNDLNTANTVSRSIRAG---IIWANCYLAFDNDCPYGGYKMSGFGR 171
AN+ YGL AG+ TNDL A +R + G I ++ + D+ PYGG K SG GR
Sbjct: 378 MANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTF-RVDH-MPYGGVKESGTGR 435
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-48
Identities = 70/182 (38%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV +GIYDEF KKL E K VG+ D V QGP IN+K +++ +I ++GA V
Sbjct: 267 LYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKV 326
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+TGGK G + EPT+ +NV DML++K+E FGP+ + KF+ AN+ GL
Sbjct: 327 VTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGL 386
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA + DL+ V+ ++ G++ N L + P+GG K SG GR+ + +YL
Sbjct: 387 AAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLE 446
Query: 184 VK 185
K
Sbjct: 447 TK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 7e-48
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
V IYDE ++LVE+ +A VG DP + GP I+ KQ DR+ ++ + GA ++
Sbjct: 268 VHRSIYDEVLERLVERFRALRVGPGLEDP--DLGPLISAKQLDRVEGFVARARARGARIV 325
Query: 73 TGG---KTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
GG + GY++ PT+ +V D +A++EIFGPV+ +M F+ AN Y
Sbjct: 326 AGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDY 385
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDN-DCPYGGYKMSGFGRDCGLDSLHK 180
GL AG+ T D + A V+R +RAG ++ N Y A + P+GG K SG GR+ GL++L+
Sbjct: 386 GLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYN 445
Query: 181 YLHVKSVV 188
Y K+V
Sbjct: 446 YTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-47
Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 8/177 (4%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
VQE + +E +KL E+ VGDP D A++ G ++ Q RI +E G+ EGA V
Sbjct: 297 VQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQ 356
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
G + KG + PT+FTNV IA++EIFGPV+V++ F ANN YGLAA
Sbjct: 357 PGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAA 416
Query: 126 GIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
+ + +L+ A V+ S++AG++W N + FD +GGY+ SGFGR+ G + L++YL
Sbjct: 417 SVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 160 bits (408), Expect = 2e-47
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE-GAT 70
++V E IYD F +KLV K +GDP D A + G I++KQF ++ YI+ G GAT
Sbjct: 266 LFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGAT 325
Query: 71 VLTGGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN 118
VL GG G++++PTIF+ V + +A++EIFGPV+ + + AN+
Sbjct: 326 VLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMAND 385
Query: 119 RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDS- 177
YGLAA + T DL A + ++ AG + N YGG+K SG GR+ L+
Sbjct: 386 SHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGM 445
Query: 178 LHKYLHVKSVV 188
L + K+V
Sbjct: 446 LEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 4e-47
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV E +YDEF +LV KA+A G + GP +Q D + +++ +GA
Sbjct: 266 VYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKA 325
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGG G + EPT+ T+V DM + ++E FGPV+ +M AN+ RYGL
Sbjct: 326 LTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGL 385
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFD--NDCPYGGYKMSGFGRDCGLDSLHKY 181
+A + + DL A ++R + AG + N L P+GG K SG GR G + L ++
Sbjct: 386 SASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREF 445
Query: 182 LHVKSVVT 189
K++
Sbjct: 446 CRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 5e-47
Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV+ I+D F L +A++ +G P DPA N GP I+ + D++LSY +EGATV
Sbjct: 289 VYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATV 348
Query: 72 LTGGKTVG-----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN 118
+TGG G +++PTI+T + + + +EIFGP + F+ AN+
Sbjct: 349 VTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAND 408
Query: 119 RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSL 178
YGLAA + T DL+ A+ V+R + GI+W N + D P+GG K+SG GR+ G+ SL
Sbjct: 409 TPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSL 468
Query: 179 HKYLHVKSV 187
Y + +V
Sbjct: 469 EFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 6e-47
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
+QE IYD F ++ +E+ KA G+P D G Q + +Q ++ILSYI+ GK+EGA VLT
Sbjct: 291 IQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLT 350
Query: 74 GGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
GG+ G Y PT F M I ++EIFGPV+ + F AN+ Y
Sbjct: 351 GGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLY 409
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GL AG+ T D NTA + R I+AG +W NCY + +GGYK SG GR+ L Y
Sbjct: 410 GLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHY 469
Query: 182 LHVKSVVT 189
K+++
Sbjct: 470 QQTKNLLV 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 1e-46
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 26/196 (13%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E +YDEF K+ VE+AK VGD D + GP IN+ Q +++L+Y E GK+EGAT+
Sbjct: 284 LIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATL 343
Query: 72 LTGGKTV----GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
L GG+ + +KGY++EPT+FT+V DM IA++EIFGPV+ L++ + AN+
Sbjct: 344 LLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDT 403
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGI-------IWANCYLAFDNDCPYGGYKMSGFG-R 171
YGL++ I T D+N A R + AGI I A +L P+GG K SG G R
Sbjct: 404 EYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHL------PFGGVKKSGNGHR 457
Query: 172 DCGLDSLHKYLHVKSV 187
+ G +L + K+V
Sbjct: 458 EAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 3e-46
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V+E +YDEF KK V +A VGDP DP GP I+ +Q +RI +E +GA +
Sbjct: 268 IIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKL 327
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK G + +PT+ T+V DM I ++E FGPV ++ AN+ YGL
Sbjct: 328 LTGGK---YDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGL 384
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDN-DCPYGGYKMSGFGRDCGLDSLH 179
+A I+TNDL A ++ + +G++ N D P+GG K SGFGR+ G S+
Sbjct: 385 SAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSME 441
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-45
Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I VQEGIYD+F + + + VVGD F+ V QGP IN+ ++ S+++ +GA V
Sbjct: 309 ILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKV 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GGK G + EPT+ +V EDMLI ++E+FGPV L +F AN+ GL
Sbjct: 369 LLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA I T DL A VS ++ GI+ N L P+GG K SG GR+ + +YL
Sbjct: 429 AAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLE 488
Query: 184 VKSV 187
+K V
Sbjct: 489 IKYV 492
|
Length = 498 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 3e-45
Identities = 76/187 (40%), Positives = 100/187 (53%), Gaps = 28/187 (14%)
Query: 5 FTHQ------FPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRIL 58
F HQ I V E +YDEF +K VE+ KA GDP DP GP IN+ Q D +L
Sbjct: 267 FLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLL 326
Query: 59 SYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--- 115
IE +EGAT+L GG+ G +EPT+ ++V DM IA++EIFGPV ++K +
Sbjct: 327 DKIEQAVEEGATLLVGGEAEGN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEE 383
Query: 116 -----ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFD---ND---CPYGGY 164
AN+ YGL+ + T+DL +R I AG+ N D ND P+GG
Sbjct: 384 EALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHIN-----DQPVNDEPHVPFGGE 438
Query: 165 KMSGFGR 171
K SG GR
Sbjct: 439 KNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 8e-45
Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E +YDEF ++LV+ K +GDP D GP IN+ ++ L+ IE K +G TV
Sbjct: 285 LIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTV 344
Query: 72 LTGGK--TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
LTGGK G+ G Y+EPTI T V +D I ++E F P++ ++KF+ N+
Sbjct: 345 LTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQ 404
Query: 122 GLAAGIITNDLNTANTVSR---------SIRAGIIWANCYLAFDNDCPYGGYKMSGFGRD 172
GL++ I T DL A ++ A AF GG K +G GR+
Sbjct: 405 GLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAF------GGEKETGGGRE 458
Query: 173 CGLDSLHKYLHVKSV 187
G D+ +Y+ +
Sbjct: 459 SGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-44
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V +YDEF+ +LV + KA GDP D A + GP I++ + +R+ ++ GA +
Sbjct: 269 VLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKL 328
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LTGGK G +EPTI +V DM + +E+FGPV+ + ++ N+ ++GL
Sbjct: 329 LTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGL 385
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGR 171
AG+ T DL A + G + N F D PYGG K SG GR
Sbjct: 386 QAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR 434
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 2e-44
Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 25/191 (13%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V E +YDE +K+VE K VG+P D A GP IN+ FD+I+SYIE GK+EG ++
Sbjct: 328 VHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVL 385
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
GG+ KGY+I+PTIF +V I ++EIFGPV+ +K ANN YGL
Sbjct: 386 GGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTG 445
Query: 126 GIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC--------PYGGYKMSGF-GRDCGLD 176
+I+N+ R G N Y F+ C P+GG+ MSG + G D
Sbjct: 446 AVISNNREHLEKARREFHVG----NLY--FNRGCTGAIVGYHPFGGFNMSGTDSKAGGPD 499
Query: 177 SLHKYLHVKSV 187
L +L K+V
Sbjct: 500 YLLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-43
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
YV +DE KL + ++ VG P D +V GP N+ FD++ SY++ + EG +
Sbjct: 290 FYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEI 349
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+ GG+ + +GY+++PT+ D + ++E FGPV+ + + N+ +GL
Sbjct: 350 VRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGL 409
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
A + TN+L+ A I AG +W N + D P+GG K SG GR+ G + Y
Sbjct: 410 TASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTE 469
Query: 184 VKSV 187
+KSV
Sbjct: 470 LKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 149 bits (377), Expect = 5e-43
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 13/171 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V+E +YD+F K LVEK K VGDP D + + GP I+ + +R+ + + ++G +
Sbjct: 272 ILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKI 331
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GGK +G + PT+ N DM++ K+E+FGPV+ + K AN+ YGL
Sbjct: 332 LYGGK--RDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGL 389
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFGRD 172
A + TND+N A V+R + AG + N +DN P+GG+K SG GR+
Sbjct: 390 QASVFTNDINRALKVARELEAGGVVINDSTRFRWDN-LPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 3e-42
Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQ I DE +L + A VG DPA + GP I++ DR+ +E GA V
Sbjct: 267 VLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEV 326
Query: 72 LTGGKTVGQ---KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
+ G V + KG ++ PT+ D I ++EIFGPV+ L F+ AN+
Sbjct: 327 VLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTD 386
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGLAA + T DL A V+R+IRAG +W N + + GGY+ SG GR G+ +L
Sbjct: 387 YGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALED 446
Query: 181 YLHVKSVV 188
++ K +
Sbjct: 447 FIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 1e-39
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 10/182 (5%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
++E I DEF L ++A+ W G P DPA G I+ D + S+I G+ +G +L
Sbjct: 310 LEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLL 368
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
G+ G I PTIF +V + ++++EIFGPV+V+ +F AN+ +YGL A
Sbjct: 369 DGRNAGLAAA-IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGA 427
Query: 126 GIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185
+ T DL+ A+ +SR ++AG ++ N Y D P+GGYK SG GRD L +L K+ +K
Sbjct: 428 AVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELK 487
Query: 186 SV 187
++
Sbjct: 488 TI 489
|
Length = 494 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 2e-38
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 2 RVCFTHQFPN----IYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PAVNQGPQINKKQFDR 56
RV + Q N +YVQ+GIYD+F +L E +A G+P + + GP IN +R
Sbjct: 206 RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 265
Query: 57 ILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN- 115
+ + +EGA V GGK V KGYY PT+ +V+++M I +E FGPV+ ++ F+
Sbjct: 266 VEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 325
Query: 116 -------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN-----CYLAFDNDCPYGG 163
AN+ YGL + I T +LN A + ++ G + N F + G
Sbjct: 326 LEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGF-----HAG 380
Query: 164 YKMSGFGRDCGLDSLHKYLHVKSV 187
++ SG G G LH+YL + V
Sbjct: 381 WRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 6e-38
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
V E + D + KL KAK VGDP V GP IN +Q DR+ + ++ GA +
Sbjct: 259 HLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARL 318
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G + PT+ + VK M +EIFGPV + F+ AN+ YGL
Sbjct: 319 EAGGT---YDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGL 375
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC--PYGGYKMSGFGRDCG 174
+AGII+ D+ A ++ +R G++ N D + P+GG SG G G
Sbjct: 376 SAGIISRDVGRAMALADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFG 427
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 1e-37
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 19 YDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV 78
YDE + GDP DP GP I+ +Q DR+ SY++ EG GG
Sbjct: 298 YDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRP 357
Query: 79 G--QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGII 128
+G+++EPT+ + + +A++EIFGPV+ ++ + AN+ YGL+ +
Sbjct: 358 ADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVF 417
Query: 129 TNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188
D A V+ +R G + N + + D P+GGYK SG GR+ G+ +YL K +
Sbjct: 418 GADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIA 477
Query: 189 TP 190
T
Sbjct: 478 TA 479
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-37
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYV E IYDEF + V +A +G +D + + G I++ Q + + ++++ +GATV
Sbjct: 301 IYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATV 360
Query: 72 LTGGKT---VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
L GGK +G + EPT+ T V DM +A++E FGPV+ + AN+
Sbjct: 361 LAGGKARPDLGP--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTP 418
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGII---------WANCYLAFDNDCPYGGYKMSGFGR 171
YGL A + T D ++ IRAG + W + D P GG K SG GR
Sbjct: 419 YGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGS------VDAPMGGMKDSGLGR 472
Query: 172 DCGLDSLHKYLHVKSVVT----PIHNSPWL 197
G + L KY +++ T P+ P +
Sbjct: 473 RHGAEGLLKYTESQTIATQRVLPLAPPPGM 502
|
Length = 524 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 2e-37
Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 10 PNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGA 69
DE+ KLVE+AK VG DP + GP I+ +RI IESG +EGA
Sbjct: 282 SVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGA 341
Query: 70 TVLTGGKTV----GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------AN 117
++ G+ V + G ++ PTI NV DM I K+EIFGPV+ +++ + N
Sbjct: 342 KLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIIN 401
Query: 118 NRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLA-----FDNDCPYGGYKMSGFGRD 172
YG A I T A R + AG++ N + F +GG+K S FG D
Sbjct: 402 ANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFF----SFGGWKGSFFG-D 456
Query: 173 C---GLDSLHKYLHVKSVVT 189
G D + Y K+V +
Sbjct: 457 LHFYGKDGVRFYTQTKTVTS 476
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 2e-36
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYV E IYD F + V K + +GDP DP+ GP ++ + D + + I +GA
Sbjct: 264 IYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARA 323
Query: 72 LTGGKT---VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
L G G Y+ PT+ TNV M + ++E FGPV+ +MK N+
Sbjct: 324 LIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSE 383
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSL-- 178
YGL A + T D+ A + + G ++ N D + G K SG G L L
Sbjct: 384 YGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG--VTLSRLGY 441
Query: 179 HKYLHVKSV 187
+ KS
Sbjct: 442 DQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-36
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 12/185 (6%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V E +YDE ++ VE ++ VG P V GP I++K F++I+ YIE GK EG +++
Sbjct: 324 VHEKVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVS 382
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
GG KGY+I PTIF +V +A++EIFGPV+ ++ + ANN YGL
Sbjct: 383 GGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTG 442
Query: 126 GIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFGRDC-GLDSLHKYL 182
G+I+N+ + N G ++ N A P+GG+KMSG G D L ++
Sbjct: 443 GVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFM 502
Query: 183 HVKSV 187
K+V
Sbjct: 503 QAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 2e-36
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYV E +YDEF ++ V + +A +G D + G I++ Q DR+ ++++ +GATV
Sbjct: 265 IYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATV 324
Query: 72 LTGGKTVGQKG-YYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
L GG+ G Y+ EPT+ T V EDM + +E FGPV+ + + AN+ YG
Sbjct: 325 LAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYG 384
Query: 123 LAAGIITNDLNTANTVSRSIRAGII---------WANCYLAFDNDCPYGGYKMSGFGRDC 173
L A + T D ++ +RAG + WA+ D P GG K SG GR
Sbjct: 385 LNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASI------DAPMGGMKDSGLGRRH 438
Query: 174 GLDSLHKYLHVKSVVT 189
G + L KY ++V
Sbjct: 439 GAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-36
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E + DE + L E+ VG P+D V+ P I+ K D + I+ +GATV
Sbjct: 288 VLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATV 347
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG + G I PT+ V DM +A +E FGPV+ +++ N AN YGL
Sbjct: 348 LNGGG--REGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGL 405
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC-PYGGYKMSGFGRDCGLDSLHKYL 182
A I T D+N A ++ ++ G + N D P+ G K SG G D+L
Sbjct: 406 QASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMT 465
Query: 183 HVKSVVT 189
K +V
Sbjct: 466 RRKGIVI 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 8e-36
Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E IYD+ + L ++ +A G P D V+ G I+ +FDR+ + ++GA +
Sbjct: 272 VIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARL 331
Query: 72 LTGGKTVGQ----KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
L GGK +G+Y PT+ +V DM IA++E+FGPVMV+MK + AN+
Sbjct: 332 LAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANST 391
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGII----WANCYLAFDNDCPYGGYKMSGFGRDCGL 175
YGL A + D+ A ++ + G++ + Y P+GG K SGFGR G
Sbjct: 392 EYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYV--QQLPFGGVKGSGFGRFAGE 449
Query: 176 DSLHKYLHVKSVVT 189
+ L + KSV
Sbjct: 450 EGLRGLCNPKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 3e-35
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 9/186 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-AT 70
IY Q GIYD +KL G P D + GP + +R++ +E K G
Sbjct: 285 IYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIK 344
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
V+TGG+ GYY PT+ K+D I + E+FGPV+ + F+ AN+ +YG
Sbjct: 345 VITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYG 404
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+ + T D+ A+ +S ++ G W N + ++ P+GG K+SG+G+D L L Y
Sbjct: 405 LASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYT 464
Query: 183 HVKSVV 188
V+ ++
Sbjct: 465 VVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 8e-35
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 88 TIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVS 139
T+ +V DM IA++EIFGPV+ +++F AN+ YGL AG+ T DLN A V+
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 140 RSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188
+RAG ++ N P+GG K SG GR+ G L +Y K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 8e-35
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYV E +YDEF + V K VGDP D + GP I+++ +R+ ++E + GA +
Sbjct: 270 IYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARL 329
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG+ + G +PT+ +V D ++ +E FGPV+ +++++ AN+ YGL
Sbjct: 330 LCGGE---RDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGL 386
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRD 172
AGI T DLN A + + G + N AF D P+GG K SG GR+
Sbjct: 387 QAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGRE 436
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 9e-33
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V E + DEF LVEK+ A VVGDP DPA + G I+++ +I + +E +GA V
Sbjct: 267 ILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARV 326
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L G ++G PT+ +V D + +E FGPV +++ +N+ YGL
Sbjct: 327 LLGN---QRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGL 383
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFG 170
++G+ TNDL+T + + G + N F ++ P+GG K SG G
Sbjct: 384 SSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLG 431
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-31
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V E I DEF +KL A+ + P G ++ DR+ ++ +GA +
Sbjct: 250 IIVHESIADEFVEKLKAAAEK-LFAGPVVL----GSLVSAAAADRVKELVDDALSKGAKL 304
Query: 72 LTGGKTVGQK-GYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
+ GG G + PTI NV DM I +E FGPV+ +++ AN+ YG
Sbjct: 305 VVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYG 364
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC-PYGGYKMSGFGRDCGLDSLHKY 181
L+A + T DL A V++ I +G + N D P+GG K SG+GR G + ++
Sbjct: 365 LSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEF 424
Query: 182 LHVKSV 187
K +
Sbjct: 425 TETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 2e-31
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 8/182 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YVQ+G+YD F +KL + +GD + V GP I++K ++ +I ++GA V
Sbjct: 295 LYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARV 354
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+ GGK G + +PTI +V + +AK+E FGP+ L +F AN+ +GL
Sbjct: 355 VCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGL 414
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA DL+ V ++ GI+ N + + P+GG K SG GR+ + YL
Sbjct: 415 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLE 474
Query: 184 VK 185
+K
Sbjct: 475 IK 476
|
Length = 482 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 4e-28
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
V +YD F +K V + A VGDP DP + GP ++ D + ++ GAT+L
Sbjct: 273 VHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILC 332
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
GGK G++ PT+ T++ DM + +E+FGPV L + AN +GL +
Sbjct: 333 GGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGS 392
Query: 126 GIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185
T D + AG ++ N + P+GG K SG+GR+ + ++ ++K
Sbjct: 393 NAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIK 452
Query: 186 SV 187
+V
Sbjct: 453 TV 454
|
Length = 457 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 3e-27
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYI 61
+VC + Q ++V I D+F ++L A+ VVGDP DP GP I ++ DR+ ++
Sbjct: 263 QVCVSVQ--RVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWV 320
Query: 62 ESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------ 115
GA +L GGK + Y PT+ + D ++ EIFGPV+ + ++
Sbjct: 321 NEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAI 378
Query: 116 --ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFG 170
AN+ A + T DL+ A R + A + N + AF D P+ G + SG+G
Sbjct: 379 AQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 5e-27
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
++EGI F ++ V A A +GDP D GP D + +E+ EGA +L
Sbjct: 276 IEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLL 335
Query: 74 GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAA 125
GG+ + G Y PT+ NV +M ++E+FGPV + AN+ +GL+A
Sbjct: 336 GGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSA 395
Query: 126 GIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185
I T D A ++ + G ++ N Y A D +GG K SGFGR+ LH++ +++
Sbjct: 396 TIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQ 455
Query: 186 SV 187
+V
Sbjct: 456 TV 457
|
Length = 462 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-26
Identities = 64/194 (32%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E IYDE ++L + K +GDP D GP K D L+ IE K +G TV
Sbjct: 284 LIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTV 343
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGL 123
L GGK + G Y+EPTI D I K+E F P++ ++KF+ N GL
Sbjct: 344 LFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGL 402
Query: 124 AAGIITNDLNTANTVSRSIRA-----GIIWANCYL---------AFDNDCPYGGYKMSGF 169
++ I T DL A R + GI N + AF GG K +G
Sbjct: 403 SSSIFTTDLRNA---FRWLGPKGSDCGI--VNVNIGTSGAEIGGAF------GGEKETGG 451
Query: 170 GRDCGLDSLHKYLH 183
GR+ G D+ +Y+
Sbjct: 452 GRESGSDAWKQYMR 465
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 8e-24
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + +G Y+ ++L+++A+ VG P + + GP I+ +Q ++LSYIE GK EG +
Sbjct: 309 LILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA----------NNRRY 121
+ GGK + +GY++ PT+ V IA++EIFGPV+ ++++ N+ Y
Sbjct: 368 VLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPY 427
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYL--AFDNDCPYGGYKMSGFG-RDCGLDSL 178
GL G+ + R G ++ N + A P+GG+K+SG + G L
Sbjct: 428 GLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYL 487
Query: 179 HKYLHVKSV 187
++L +K+V
Sbjct: 488 RRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 4e-23
Identities = 57/194 (29%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 17 GIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGK 76
G DE+ ++ E+A+ +G DP GP I + DR+ S I G EGA VL G+
Sbjct: 288 GAADEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR 347
Query: 77 TVGQKGY----YIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGLA 124
GY ++ PT+ V M ++EIFGPV+ +++ + N YG
Sbjct: 348 GYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNG 407
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANC-------YLAFDNDCPYGGYKMSGFG--RDCGL 175
I T D A I G + N Y +F G+K S FG G
Sbjct: 408 TAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSF------TGWKDSFFGDHHIYGK 461
Query: 176 DSLHKYLHVKSVVT 189
H Y K+V T
Sbjct: 462 QGTHFYTRGKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 93.7 bits (234), Expect = 1e-22
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E + ++F K+L E+ K + DP + + G IN+K FDR+ +++GK +
Sbjct: 246 VLVHESVKEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAGLLDNGK-----I 299
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGL 123
+ GG T ++ YIEPTI NV D + ++EIFGP++ ++ ++ +R L
Sbjct: 300 VFGGNT-DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358
Query: 124 AAGIITNDLNTANTVSRSIRAG-------II-WANCYLAFDNDCPYGGYKMSGFGRDCGL 175
A + + D V ++ G I+ AN YL P+GG SG G G
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL------PFGGVGNSGMGSYHGK 412
Query: 176 DSLHKYLHVKSVVTPIHNSPWL 197
S + H KS++ S W
Sbjct: 413 YSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 4e-22
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+Y+QE I + F + L + VGDP+D + + GP I+K + ++ E + E A +
Sbjct: 319 LYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWL 377
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA----------NNRRY 121
+ GY++ P I V L E+FGP++ +++F A N Y
Sbjct: 378 IAPAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGY 435
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYL------AFDNDCPYGGYKMSGFG 170
GL GI + D + AG N Y+ A P+GG+ +SG G
Sbjct: 436 GLTLGIHSRDEREIEYWRERVEAG----NLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 9e-22
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQE + D F + LVEK +AW GDP DP+V+ G I++ + + +GA +
Sbjct: 286 MLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARL 345
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L G + G PT+ V M + ++E FGPV +++F +N+ YGL
Sbjct: 346 LLGN---VRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGL 402
Query: 124 AAGIITNDLNTANTVSRSIRAGI--IWANCYLAFDNDCPYGGYKMSGFGRDCG-LDSLHK 180
++G+ TN L+ ++ G +W + P+GG K SG G G +++
Sbjct: 403 SSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELT-PFGGIKDSGLGYKEGVQEAMKS 461
Query: 181 YLHVKSVVTP 190
+ ++K+ P
Sbjct: 462 FTNLKTYSLP 471
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 2e-21
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 36/183 (19%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE-GAT 70
YV E ++ E +++L+E+ K +GDP D + G I++K FDRI YI+ K + A
Sbjct: 324 AYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAE 383
Query: 71 VLTGGKTVGQKGYYIEPTIF--TNVKEDMLIAKDEIFGPVMVL-----------MKFNAN 117
++ GGK GY++EPT+ T+ K ++ +EIFGPV+ + ++
Sbjct: 384 IIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELVDT 441
Query: 118 NRRYGLAAGIITND---LNTANTVSRSIRAGIIWANCYLAFDND-C--------PYGGYK 165
Y L I D + A R+ AG N Y+ ND P+GG +
Sbjct: 442 TSPYALTGAIFAQDRKAIREATDALRN-AAG----NFYI---NDKPTGAVVGQQPFGGAR 493
Query: 166 MSG 168
SG
Sbjct: 494 ASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 1e-19
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 35/197 (17%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQ--GPQINKKQFDRILSYIESGKKEGA 69
+ V E I DE ++L + K G+ DP + G IN++ FDR+ S ++ GK
Sbjct: 246 VLVHESIKDELIEELKKAIKE-FYGE--DPKESPDYGRIINERHFDRLASLLDDGK---- 298
Query: 70 TVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRY 121
V+ GG V ++ YI PTI +V D + ++EIFGP++ ++ ++ N+R
Sbjct: 299 -VVIGG-QVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPK 356
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC---------PYGGYKMSGFGRD 172
LA + + D V +G C ND P+GG SG G
Sbjct: 357 PLALYLFSEDKAVQERVLAETSSG---GVCV----NDVLLHAAIPNLPFGGVGNSGMGAY 409
Query: 173 CGLDSLHKYLHVKSVVT 189
G + H+KSV+
Sbjct: 410 HGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 1e-19
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 10 PN-IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQ-----INKKQFDRILSYIES 63
P+ + V +YDEF VE+ K + D F P +N + F+R+ S +++
Sbjct: 251 PDYVLVDPSVYDEF----VEELKKVL--DEFYPGGANASPDYTRIVNPRHFNRLKSLLDT 304
Query: 64 GKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------- 115
K V+ GG+ +I PTI ++V D + +E+FGPV+ ++K +
Sbjct: 305 TK---GKVVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKV 360
Query: 116 ANNRRYGLAAGIITNDLNTANTVSRSIRAG-IIWANCYLAFD-NDCPYGGYKMSGFGRDC 173
N+R LA I T+D + + + R+G ++ + + ++ P+GG SG+G
Sbjct: 361 INSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYH 420
Query: 174 GLDSLHKYLHVKSVVT 189
G + H ++VV
Sbjct: 421 GKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 84.0 bits (207), Expect = 4e-19
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 22 FEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV--- 78
+E KLVE+AKA V +P + GP I+K+ +RI I+SG +GA +L G+ +
Sbjct: 406 WEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVP 465
Query: 79 -GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGLAAGIIT 129
+KG +I PTI + V DM K+EIFGPV+V M+ N+ N +YG A I T
Sbjct: 466 GYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFT 525
Query: 130 NDLNTANTVSRSIRAGIIWAN 150
+ A I AG I N
Sbjct: 526 SSGAAARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 2e-17
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + E IYD+ ++L+ K +GDP + GP + IE K +G +
Sbjct: 306 LLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKI 365
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGL 123
LTGG + +G +++PTI + D + K+E+FGPV+ +MKF N+ GL
Sbjct: 366 LTGGSAIESEGNFVQPTI-VEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGL 424
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDN--------DCPYGGYKMSGFGRDCGL 175
++ I T + T+ + I G + ++C + N +GG K +G GR+ G
Sbjct: 425 SSSIFTRN---PETIFKWI--GPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479
Query: 176 DSLHKYLH 183
DS +Y+
Sbjct: 480 DSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-17
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVNQGPQ----INKKQFDRILSYIESG 64
++V E + D F VE KA + G D A P +N + FDR+ ++
Sbjct: 246 VFVHESVKDAF----VEHLKAEIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDA 299
Query: 65 KKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA-------- 116
+GA V GG+ YI PT+ TNV DM I ++EIFGPV+ ++ +
Sbjct: 300 VAKGAKVEFGGQFDAA-QRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYI 358
Query: 117 NNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN-CYLAF-DNDCPYGGYKMSGFGRDCG 174
N + LA + + D N V +G + N L F + + P+GG SG G G
Sbjct: 359 NAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHG 418
Query: 175 LDSLHKYLHVKSV 187
+ + H ++V
Sbjct: 419 VYGFKAFSHERAV 431
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 3e-17
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK--EGA 69
+YV ++ F+ +L+ + VGDP D G I++K F +I+ YIE K
Sbjct: 323 LYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSAL 382
Query: 70 TVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLM-----KFNA------NN 118
T+L GGK GY++EPT+ + + K+EIFGPV+ + K+ +
Sbjct: 383 TILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST 442
Query: 119 RRYGLAAGIITNDLNTANTVSRSIR--AGIIWAN--CYLAFDNDCPYGGYKMSG 168
YGL + D + + +R AG + N A P+GG + SG
Sbjct: 443 TSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 8e-15
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 12 IYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
+ V +G D F ++LVE AK +G P GP I R L + G
Sbjct: 246 LIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGE 305
Query: 71 VLTGGKTVGQKGYYIEPTIF--TNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
L + + ++ P I T+ + + +EIFGP++ + +++ AN R
Sbjct: 306 PLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDFDEAIALANATR 362
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAF-DNDCPYGGYKMSGFGR 171
+GL+AG++++D IRAGI+ N + P+GG +SG R
Sbjct: 363 FGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 9e-15
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSY 60
LRV ++VQE I D + L VGDP + + GP I+ + + ++
Sbjct: 833 LRV--------LFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAH 884
Query: 61 IESGKKEGATVLTGGK--TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA-- 116
IE K+E A +L + G+++ PT F L + E+FGP++ ++++ A
Sbjct: 885 IERMKRE-ARLLAQLPLPAGTENGHFVAPTAFEIDSISQL--EREVFGPILHVIRYKASD 941
Query: 117 --------NNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152
N YGL GI + TA+ ++ +R G N Y
Sbjct: 942 LDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVG----NVY 981
|
Length = 1038 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 2e-14
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E + D +K+ K VG P D + P +++ + I + K++GAT
Sbjct: 304 VLVMESVADALVEKVNAKVAKLTVGPPEDDC-DITPVVSESSANFIEGLVMDAKEKGATF 362
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGL 123
K ++G I P + NV+ DM IA +E FGPV+ +++ N+ N +GL
Sbjct: 363 CQEWK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 419
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYL 182
+ T D+N A +S ++ G + N A D P+ G K SG G +S++
Sbjct: 420 QGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMT 479
Query: 183 HVKSVV 188
VKS V
Sbjct: 480 KVKSTV 485
|
Length = 496 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 6e-14
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 21 EFEKKLVEKAKA----WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGK 76
E ++K VE K + DP + + G IN + F R+ + GK V GG+
Sbjct: 251 EVQEKFVEALKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKLLSGGK-----VAIGGQ 304
Query: 77 TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------NNRRYGLAAGII 128
T +K YI PT+ T+VK + ++EIFGP++ ++ N N+R LA +
Sbjct: 305 TD-EKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVF 363
Query: 129 TNDLNTANTVSRSIRAGIIWAN---CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185
+N+ N + + +G + N + D+ P+GG SG G G S + H +
Sbjct: 364 SNNKKVINKILSNTSSGGVCVNDTIMHYTLDS-LPFGGVGNSGMGAYHGKYSFDTFSHKR 422
Query: 186 SV 187
S
Sbjct: 423 SC 424
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 7e-14
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSY 60
LRV + +QE + D L +GDP+ + + GP I+ + I ++
Sbjct: 825 LRV--------LCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAH 876
Query: 61 IESGKKEGATV--LTGGKTVGQKGYYIEPTIFTNVK--EDMLIAKDEIFGPVMVLMKFNA 116
IE+ + G V L +KG ++ PT+ + D+ + E+FGPV+ +++F A
Sbjct: 877 IEAMRAAGRLVHQLPLPAET-EKGTFVAPTLI-EIDSISDL---EREVFGPVLHVVRFKA 931
Query: 117 ----------NNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150
N YGL G+ + T V+ IRAG I+ N
Sbjct: 932 DELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVN 975
|
Length = 1208 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 9e-14
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 49 INKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPV 108
+N F R LS + ++ GG +K YIEPTI + D I +EIFGP+
Sbjct: 284 VNSHHFQR-LSRLLDDPSVADKIVHGG-ERDEKNLYIEPTILLDPPLDSSIMTEEIFGPL 341
Query: 109 MVLMKFNA--------NNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN-CYLAFDND- 158
+ ++ N+R LAA + T + + +G + N + + D
Sbjct: 342 LPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDT 401
Query: 159 CPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189
P+GG SGFG G S + H K+V+
Sbjct: 402 LPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 1e-13
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 12 IYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEGA 69
+ V +G D F +LV AK VG +P G I+++ +++ G
Sbjct: 283 LLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGG 342
Query: 70 TVLTGGKTVGQKGYYIEPTIF--TNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
L + + P I T V E + +E FGP++ +++++ ANN
Sbjct: 343 KSLLEMTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNT 399
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGII-WANCYLAFDNDCPYGGYKMSG 168
R+GL+AG++++D + IRAGI+ W + P+GG SG
Sbjct: 400 RFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 7e-13
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 30/198 (15%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQ----INKKQFDRILSYIESGKKE 67
+ V E +EF V AKA V P + P IN++ + R+ +E + +
Sbjct: 247 VLVPEDKLEEF----VAAAKAAVAK--MYPTLADNPDYTSIINERHYARLQGLLEDARAK 300
Query: 68 GATV--LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA--------N 117
GA V L + PT+ NV +DM + ++EIFGP++ ++ +++ N
Sbjct: 301 GARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYIN 360
Query: 118 NRRYGLAAGIITNDLNTANTVSRSIRAG------IIWANCYLAFDNDCPYGGYKMSGFGR 171
R LA D + V R +G + ++A D D P+GG SG G
Sbjct: 361 ARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL---HVAQD-DLPFGGVGASGMGA 416
Query: 172 DCGLDSLHKYLHVKSVVT 189
G + + H K V
Sbjct: 417 YHGKEGFLTFSHAKPVFK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 3e-12
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V I D+F + L E K + G+ + + +N+ R+ I+ G V
Sbjct: 255 VLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKV 310
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF-NA-------NNRRYGL 123
+ GG+ V + Y+ PTI N D + ++EIFGP++ ++ + N N+R L
Sbjct: 311 VYGGE-VDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPL 369
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWAN-CYLAFDND-CPYGGYKMSGFGRDCGLDSLHKY 181
A D V + +G + N C N P+GG SG G G +
Sbjct: 370 ALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTF 429
Query: 182 LHVKSVV 188
H K V+
Sbjct: 430 SHPKPVL 436
|
Length = 493 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 2e-11
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 20 DEFEKKLVEKAKAWVVGDPFD--PAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT 77
D F +LVE A+ VG +D P G I+ + R+L+ G L +
Sbjct: 290 DAFLARLVEVAERLTVGA-WDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQ 348
Query: 78 VGQKGYYIEPTIF--TNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGI 127
+ + P I T V E + +E FGP++ +++++ ANN R+GL+AG+
Sbjct: 349 LDPGAALLTPGIIDVTGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGL 405
Query: 128 ITNDLNTANTVSRSIRAGII-WANCYLAFDNDCPYGGYKMSG 168
+++D + IRAGI+ W + P+GG SG
Sbjct: 406 LSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 6e-11
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIES----GKKE 67
+ +QE + D L VG+P + GP I+ + I +I++ G+
Sbjct: 388 LCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLV 447
Query: 68 GATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA----------N 117
QKG ++ PT+ D L + E+FGPV+ ++++ N
Sbjct: 448 HQAAAPNSL---QKGTFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQIN 502
Query: 118 NRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYL--AFDNDCPYGGYKMSGFG 170
YGL G+ T T V+ AG ++ N + A P+GG +SG G
Sbjct: 503 ATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 7e-11
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQE + D + + VG P + GP I+ + +L++IE + +
Sbjct: 312 LCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKI 371
Query: 72 ---LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA----------NN 118
Q G ++ PT+F L +E+FGPV+ ++++ A N
Sbjct: 372 AQLTLDDSRACQHGTFVAPTLFELDDIAEL--SEEVFGPVLHVVRYKARELDQIVDQINQ 429
Query: 119 RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYL------AFDNDCPYGGYKMSGFGRD 172
YGL G+ + T + + R G NCY+ A P+GG +SG G
Sbjct: 430 TGYGLTMGVHSRIETTYRWIEKHARVG----NCYVNRNQVGAVVGVQPFGGQGLSGTGPK 485
Query: 173 CG 174
G
Sbjct: 486 AG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 6e-09
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 49 INKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPV 108
+NKK F R+ + ++ + A+++ GG ++ +K +IEPTI N D I +EIFGP+
Sbjct: 294 LNKKHFQRLSNLLKD-PRVAASIVHGG-SIDEKKLFIEPTILLNPPLDSDIMTEEIFGPL 351
Query: 109 MVLMKFNA--------NNRRYGLAAGIITNDLN-TANTVSRSIRAGIIWANCYLAFDNDC 159
+ ++ N++ LA TN+ +S + + + + + + D
Sbjct: 352 LPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDS 411
Query: 160 -PYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189
P+GG SGFGR G S + H K+V+
Sbjct: 412 LPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 9e-09
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V E +YD + L + VG+P + V GP +++ Q + + + + A V
Sbjct: 302 IFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLA-ALRAQAEV 360
Query: 72 LTGGKTVG------QKGYYIEPTIFTNVKED--MLIAKDEIFGPVMVLMKF 114
L G + PT+ D + E+FGPV L+ +
Sbjct: 361 LFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPY 411
|
Length = 521 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+V E D + L + VVGDP V GP ++++Q + + + + + E A V
Sbjct: 298 AFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEV 356
Query: 72 LTGGK----TVG---QKGYYIEPTIFTNVKEDMLIAKD----EIFGPVMVLMKFN----- 115
+ GG VG +KG + PT+ + +D A E FGPV LM ++
Sbjct: 357 VFGGPDRFEVVGADAEKGAFFPPTLL--LCDDPDAATAVHDVEAFGPVATLMPYDSLAEA 414
Query: 116 ---ANNRRYGLAAGIITNDLNTANTV 138
A R L A ++TND A +
Sbjct: 415 IELAARGRGSLVASVVTNDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 3e-07
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 49 INKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPV 108
+N FDR LS + K+ ++ GG+ ++ I PTI +V D LI +EIFGP+
Sbjct: 295 VNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPL 352
Query: 109 MVLMKFNANNRRYG--------LAAGIITNDLNTANTVSRSIRAGIIWAN---CYLAFDN 157
+ ++ N + LAA + T++ + ++ AG I N +LA +
Sbjct: 353 LPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLAL-H 411
Query: 158 DCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188
P+GG SG G G S + H K+V+
Sbjct: 412 TLPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-05
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 16/137 (11%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V + + + K L + V+GDP + V+ GP ++ +Q + + + + GA V
Sbjct: 298 VIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEV 357
Query: 72 LTGGKTVGQKGYYIEPTIFT--NVKEDMLIAKDEIFGPVMVLMKFNANNRRYG------- 122
GG G + PT+ + + A E FGPV + +R
Sbjct: 358 RLGGPGR-LDGAFFPPTLLLAEDPWAGAVHAT-EAFGPVATFFPY--GDRAEAARLAARG 413
Query: 123 ---LAAGIITNDLNTAN 136
L A + T+D A
Sbjct: 414 GGSLVATLATSDPEEAR 430
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 2e-05
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 22/150 (14%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
V + D + L + VVGDP V G + +Q + + + + A +
Sbjct: 302 AIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEI 360
Query: 72 LTGGK----TVG---QKGYYIEPTIFTNVKEDMLIAKD----EIFGPVMVLMKFN----- 115
+ GG VG +KG + PT+ +D L A E FGPV LM ++
Sbjct: 361 VFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEA 418
Query: 116 ---ANNRRYGLAAGIITNDLNTANTVSRSI 142
A + L A ++T D A +
Sbjct: 419 IELAARGKGSLVASLVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLT 73
+Q+ + D K L +G+P + + GP I+ + I +I++ + +G V
Sbjct: 925 LQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984
Query: 74 ---GGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA----------NNRR 120
Q G ++ PT+ D L K E+FGPV+ ++++N N
Sbjct: 985 AARENSEDWQSGTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASG 1042
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYL------AFDNDCPYGGYKMSGFG 170
YGL G+ T T V+ S G N Y+ A P+GG +SG G
Sbjct: 1043 YGLTLGVHTRIDETIAQVTGSAHVG----NLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 99.98 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 99.97 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.97 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 99.97 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 99.97 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 99.97 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 99.97 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 99.96 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.96 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 99.96 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 99.95 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 99.92 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.63 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.27 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 97.99 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 97.81 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 93.69 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 93.17 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 92.89 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-54 Score=366.58 Aligned_cols=194 Identities=54% Similarity=0.958 Sum_probs=187.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++ ++|+|||++|||+|+++++++..+ +++|||.++.+..||.+++.|++|+++||+.++++||++++||.+..
T Consensus 299 Gq~C~a--~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g 376 (501)
T KOG2450|consen 299 GQCCTA--GSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLG 376 (501)
T ss_pred cccccc--CceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccC
Confidence 899999 889999999999999999999966 99999999999999999999999999999999999999999998765
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
+.|+|+.|||+.++..+|.+++|||||||++|++|+ +|++.|||+++|||+|.++++++++.+++|+||||+
T Consensus 377 ~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~ 456 (501)
T KOG2450|consen 377 DKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINC 456 (501)
T ss_pred CCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEec
Confidence 689999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCCC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPW 196 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~ 196 (197)
+....+..||||+|+||+||+.|.+++.+|++.|+|+++.+.+.|
T Consensus 457 y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 457 YNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKNS 501 (501)
T ss_pred cccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCCC
Confidence 999999999999999999999999999999999999999887654
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=365.03 Aligned_cols=195 Identities=75% Similarity=1.294 Sum_probs=187.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+.
T Consensus 299 GQ~C~a~~--ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 376 (501)
T PLN02766 299 GEICVASS--RVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376 (501)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976444
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 377 ~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~ 456 (501)
T PLN02766 377 KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCY 456 (501)
T ss_pred CCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCCCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPWL 197 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~ 197 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++.+-+..||
T Consensus 457 ~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~~~~~ 501 (501)
T PLN02766 457 FAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501 (501)
T ss_pred CCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEeccccccC
Confidence 777788999999999999999999999999999999999999997
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=363.39 Aligned_cols=188 Identities=32% Similarity=0.592 Sum_probs=179.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||...+.
T Consensus 286 GQ~C~a~~--ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~ 363 (482)
T PRK11241 286 GQTCVCAN--RLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHEL 363 (482)
T ss_pred CCCCccCe--EEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCC
Confidence 89999955 9999999999999999999999999999999999999999999999999999999999999999975433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+||||++
T Consensus 364 ~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~ 443 (482)
T PRK11241 364 GGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTG 443 (482)
T ss_pred CCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 444 ~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 444 IISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 76667789999999999999999999999999998754
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-51 Score=361.96 Aligned_cols=195 Identities=55% Similarity=1.027 Sum_probs=187.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 336 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~ 413 (538)
T PLN02466 336 GQCCCAGS--RTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGS 413 (538)
T ss_pred CCCcCcCc--EEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 414 ~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~ 493 (538)
T PLN02466 414 KGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCF 493 (538)
T ss_pred CceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCC
Confidence 68999999999999999999999999999999999 8999999999999999999999999999999999988
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCCCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPWL 197 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~ 197 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++.+++..||
T Consensus 494 ~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 494 DVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred CCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCCC
Confidence 777788999999999999999999999999999999999999997
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=357.54 Aligned_cols=188 Identities=44% Similarity=0.842 Sum_probs=179.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++||++++||...+.
T Consensus 288 GQ~C~a~~--rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~ 365 (486)
T cd07140 288 GENCIAAG--RLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365 (486)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999965 9999999999999999999999999999999999999999999999999999999999999999975444
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||
T Consensus 366 ~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN 445 (486)
T cd07140 366 PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVN 445 (486)
T ss_pred CCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 68999999999999999999999999999999994 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 446 ~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 446 TYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred CCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 9877777899999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-50 Score=353.15 Aligned_cols=188 Identities=33% Similarity=0.625 Sum_probs=179.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-ATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++| +++++||...+
T Consensus 276 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~ 353 (472)
T TIGR03374 276 GQDCTAAC--RIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRK 353 (472)
T ss_pred CCccccCC--EEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999 79999997654
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 354 ~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~ 433 (472)
T TIGR03374 354 GNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNT 433 (472)
T ss_pred CCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 468999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
+....+.+||||+|.||+|+++|++++++|++.|+++++
T Consensus 434 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 434 HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred CCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 877778899999999999999999999999999999753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-50 Score=346.05 Aligned_cols=189 Identities=34% Similarity=0.589 Sum_probs=179.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDP-AVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++ ++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 211 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 288 (409)
T PRK10090 211 GQVCNCAE--RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVE 288 (409)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 89999966 9999999999999999999999999999997 89999999999999999999999999999999997654
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||+
T Consensus 289 ~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~ 368 (409)
T PRK10090 289 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR 368 (409)
T ss_pred CCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence 468999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+....+..||||+|.||+|+++|.+++++|++.|++++++
T Consensus 369 ~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 369 ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred CCCCCCCCCcCCcccccCCccchHHHHHHhcceEEEEEec
Confidence 8776667899999999999999999999999999998764
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-50 Score=351.46 Aligned_cols=186 Identities=23% Similarity=0.386 Sum_probs=175.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.+ ++++|||+++.+++++.++|+++ ++|+++++||..+ .
T Consensus 250 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~ 324 (484)
T PLN02174 250 GQACISPD--YILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-R 324 (484)
T ss_pred CCCCCcCc--EEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-C
Confidence 89999966 999999999999999999999999999987 78999999999999999999998 7889999999753 3
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||++
T Consensus 325 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~ 404 (484)
T PLN02174 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDI 404 (484)
T ss_pred CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC--CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LAF--DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~--~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
... .+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 405 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 405 AVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred cCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECC
Confidence 654 378999999999999999999999999999998764
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=350.95 Aligned_cols=188 Identities=32% Similarity=0.662 Sum_probs=179.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||.....
T Consensus 281 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~ 358 (477)
T cd07113 281 GQVCAAPE--RFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358 (477)
T ss_pred CCCCcCCc--EEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999975433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||.+
T Consensus 359 ~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~ 438 (477)
T cd07113 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMH 438 (477)
T ss_pred CCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 439 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 439 TFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred CCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 76678899999999999999999999999999999875
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=351.04 Aligned_cols=188 Identities=53% Similarity=0.940 Sum_probs=180.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||+..+.
T Consensus 286 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 363 (481)
T cd07141 286 GQCCCAGS--RTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGD 363 (481)
T ss_pred CCcccCCe--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 364 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~ 443 (481)
T cd07141 364 KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCY 443 (481)
T ss_pred CCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 444 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 444 NVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481 (481)
T ss_pred CCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEEC
Confidence 77778899999999999999999999999999999753
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=349.24 Aligned_cols=183 Identities=40% Similarity=0.674 Sum_probs=175.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 258 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~ 335 (448)
T TIGR01780 258 GQTCVCAN--RLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHEL 335 (448)
T ss_pred CCcccCCc--eeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999955 9999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||++
T Consensus 336 ~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~ 415 (448)
T TIGR01780 336 GGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTG 415 (448)
T ss_pred CCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhccccc
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k 185 (197)
....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 416 ~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 416 LISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred CCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 776678999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=350.29 Aligned_cols=189 Identities=43% Similarity=0.818 Sum_probs=180.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++||++++||...+
T Consensus 280 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 357 (480)
T cd07559 280 GEVCTCPS--RALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357 (480)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 358 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~ 437 (480)
T cd07559 358 GGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVW 437 (480)
T ss_pred ccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEE
Confidence 369999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 438 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 480 (480)
T cd07559 438 VNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVSY 480 (480)
T ss_pred ECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 9987776788999999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-50 Score=330.20 Aligned_cols=189 Identities=35% Similarity=0.642 Sum_probs=182.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee-C
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-G 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-~ 79 (197)
||.|.+++ |+|||++|||+|+.+|.++++++++||.+++++..|||||+.+.+++..++++|+++||++++||+.. +
T Consensus 302 GQtCVcaN--R~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~ 379 (503)
T KOG2451|consen 302 GQTCVCAN--RVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSE 379 (503)
T ss_pred CceeEecc--eeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccc
Confidence 89999977 99999999999999999999999999999999999999999999999999999999999999999954 3
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..++|++|||+.+++.+|.+.+||+|||+.+|.+|| +|+++.||++|+||+|.++..+++++|+.|+|.+|.
T Consensus 380 lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNe 459 (503)
T KOG2451|consen 380 LGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNE 459 (503)
T ss_pred cCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccc
Confidence 356999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
-..+.+..||||+|+||+||+++++|+++|+..|.+++..
T Consensus 460 glis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~ 499 (503)
T KOG2451|consen 460 GLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT 499 (503)
T ss_pred ceecccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence 9888999999999999999999999999999999998754
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=347.55 Aligned_cols=187 Identities=29% Similarity=0.570 Sum_probs=179.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 262 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~ 339 (457)
T PRK09406 262 GQSCIAAK--RFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDG 339 (457)
T ss_pred CCcccCCe--EEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 340 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 419 (457)
T PRK09406 340 PGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGM 419 (457)
T ss_pred CCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 420 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 420 TVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred CCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 8777889999999999999999999999999999864
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-49 Score=349.62 Aligned_cols=188 Identities=40% Similarity=0.638 Sum_probs=179.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 300 GQ~C~a~~--rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~ 377 (498)
T PLN02278 300 GQTCVCAN--RILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSL 377 (498)
T ss_pred CCCCcCCc--EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 378 ~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~ 457 (498)
T PLN02278 378 GGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEG 457 (498)
T ss_pred CCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999997
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|++++++|++.|+|++.
T Consensus 458 ~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 458 LISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred CCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 76667899999999999999999999999999999764
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-49 Score=348.57 Aligned_cols=188 Identities=38% Similarity=0.712 Sum_probs=179.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||....
T Consensus 280 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 357 (481)
T TIGR03216 280 GQVCLGTE--RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDF 357 (481)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ----CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 80 ----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 80 ----~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
.+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|
T Consensus 358 ~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 437 (481)
T TIGR03216 358 GDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIV 437 (481)
T ss_pred cccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEE
Confidence 369999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 148 WANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 148 ~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 438 ~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 438 WVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred EECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 9999877778899999999999999999999999999999875
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-49 Score=348.23 Aligned_cols=190 Identities=36% Similarity=0.643 Sum_probs=181.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-ATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++.++| +++++||+..+
T Consensus 277 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~ 354 (475)
T PRK13473 277 GQDCTAAC--RIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPD 354 (475)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCC
Confidence 89999965 9999999999999999999999999999999999999999999999999999999999 99999998653
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 355 ~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~ 434 (475)
T PRK13473 355 GKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNT 434 (475)
T ss_pred CCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 468999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+|+++|.
T Consensus 435 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~~ 475 (475)
T PRK13473 435 HFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKHT 475 (475)
T ss_pred CCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEecC
Confidence 87777889999999999999999999999999999988763
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-49 Score=346.17 Aligned_cols=188 Identities=32% Similarity=0.555 Sum_probs=179.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.....
T Consensus 265 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 342 (462)
T PRK13968 265 GQVCAAAK--RFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAG 342 (462)
T ss_pred CCCCcCCc--EEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 343 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~ 422 (462)
T PRK13968 343 AGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGY 422 (462)
T ss_pred CceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 423 ~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 423 CASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 77778899999999999999999999999999999875
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-49 Score=347.07 Aligned_cols=188 Identities=46% Similarity=0.851 Sum_probs=179.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 275 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~ 352 (475)
T cd07117 275 GQVCCAGS--RIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTE 352 (475)
T ss_pred CCCCCCCe--EEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 353 ~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 432 (475)
T cd07117 353 NGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVW 432 (475)
T ss_pred ccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 258999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 433 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 433 VNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred ECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999877778899999999999999999999999999999865
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-49 Score=344.89 Aligned_cols=187 Identities=43% Similarity=0.748 Sum_probs=176.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++ .+|+|||+++||+|+++|+++ ++ +++|||.|+.+++||||++.++++++++|++++++|++++.||+ ..
T Consensus 273 GQ~C~a--~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~-~~ 348 (472)
T COG1012 273 GQRCTA--ASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK-RP 348 (472)
T ss_pred CCCccC--CeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-CC
Confidence 899999 559999999999999999999 66 99999999999999999999999999999999999999999998 33
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
. |+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|..++.++++++++|+|+||+
T Consensus 349 ~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~ 427 (472)
T COG1012 349 G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGIND 427 (472)
T ss_pred C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECC
Confidence 3 9999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 152 YLA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 152 ~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+.. ..+.+||||+|.||+|+++|.+++++|++.|+|+.+..
T Consensus 428 ~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 428 YTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred CCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 863 45789999999999999999999999999999988764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-49 Score=350.98 Aligned_cols=189 Identities=33% Similarity=0.446 Sum_probs=178.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||++ +|+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++|+++||++++||...
T Consensus 388 GQ~C~A~~--Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~ 464 (604)
T PLN02419 388 GQRCMALS--TVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVV 464 (604)
T ss_pred CCCcCCCC--EEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccC
Confidence 89999966 9999999 999999999999999999999999999999999999999999999999999999999742
Q ss_pred --CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 79 --GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 79 --~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
...|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+
T Consensus 465 ~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~ 544 (604)
T PLN02419 465 PGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIG 544 (604)
T ss_pred CCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEE
Confidence 1369999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCC-CCCCCCcCCCCCCCCC--CcchHHHHHhcccccEEEEeCC
Q 038769 149 ANCYLA-FDNDCPYGGYKMSGFG--RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 149 iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
||+... ..+.+||||+|.||+| +++|.+++++|++.|+|+++..
T Consensus 545 IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 591 (604)
T PLN02419 545 INVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQK 591 (604)
T ss_pred EcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEccC
Confidence 999744 3478999999999999 7999999999999999988764
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-49 Score=345.09 Aligned_cols=188 Identities=41% Similarity=0.756 Sum_probs=179.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||....
T Consensus 256 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 333 (456)
T cd07107 256 GQSCGSTS--RLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEG 333 (456)
T ss_pred CCCCcCCc--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999996532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 334 ~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~ 413 (456)
T cd07107 334 PALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW 413 (456)
T ss_pred ccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
||++....+.+||||+|.||+|+++|++++++|++.|+|+++
T Consensus 414 iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 414 INGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred ECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999887778899999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-49 Score=346.82 Aligned_cols=191 Identities=42% Similarity=0.791 Sum_probs=181.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 281 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 358 (488)
T PRK13252 281 GQVCTNGT--RVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTE 358 (488)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999996432
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 359 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~ 438 (488)
T PRK13252 359 GGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICW 438 (488)
T ss_pred ccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEE
Confidence 259999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.+
T Consensus 439 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~~ 483 (488)
T PRK13252 439 INTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEMGP 483 (488)
T ss_pred ECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeCCC
Confidence 999766667899999999999999999999999999999987654
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-49 Score=346.30 Aligned_cols=188 Identities=41% Similarity=0.705 Sum_probs=177.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++.+||++++.+++++.++|++++++|+++++||....
T Consensus 280 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~ 357 (479)
T cd07116 280 GEVCTCPS--RALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNEL 357 (479)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|+.|||+.+++ +|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 358 ~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~ 436 (479)
T cd07116 358 GGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVW 436 (479)
T ss_pred CCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEE
Confidence 258999999999874 99999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 437 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 479 (479)
T cd07116 437 TNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVSY 479 (479)
T ss_pred ECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEeC
Confidence 9988777778999999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-49 Score=343.04 Aligned_cols=186 Identities=41% Similarity=0.752 Sum_probs=178.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++..+|+++++||.....
T Consensus 252 GQ~C~a~~--rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~ 329 (446)
T cd07106 252 GQVCAAIK--RLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDG 329 (446)
T ss_pred CCCCCCCc--EEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 330 ~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~ 409 (446)
T cd07106 330 PGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTH 409 (446)
T ss_pred CCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 410 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 410 GALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 877789999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=345.07 Aligned_cols=186 Identities=56% Similarity=1.048 Sum_probs=178.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|++++++|+++++||.....
T Consensus 282 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~ 359 (476)
T cd07142 282 GQCCCAGS--RTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGS 359 (476)
T ss_pred CCCCCCCe--eEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 360 ~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~ 439 (476)
T cd07142 360 KGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCY 439 (476)
T ss_pred CCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 440 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 440 DVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 777788999999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=343.61 Aligned_cols=190 Identities=40% Similarity=0.721 Sum_probs=180.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+
T Consensus 275 GQ~C~a~~--rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 352 (488)
T TIGR02299 275 GERCTASS--RLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPT 352 (488)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred ------CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhccee
Q 038769 80 ------QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAG 145 (197)
Q Consensus 80 ------~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G 145 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|
T Consensus 353 ~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G 432 (488)
T TIGR02299 353 FRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAG 432 (488)
T ss_pred cccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcC
Confidence 248999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 146 IIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 146 ~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+|+||+.....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 433 ~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~~ 479 (488)
T TIGR02299 433 MIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALALG 479 (488)
T ss_pred eEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEecC
Confidence 99999887767789999999999999999999999999999998763
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=342.43 Aligned_cols=188 Identities=33% Similarity=0.529 Sum_probs=176.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||...+.
T Consensus 275 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 352 (474)
T cd07130 275 GQRCTTTR--RLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDG 352 (474)
T ss_pred CCCCcCCe--EEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986444
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhh--cceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRS--IRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~--l~~G~v~iN 150 (197)
.|+|++|||+.++.+ |.+++||+||||++|++|+ +|+++|||+++|||+|.+++.+++++ +++|+|+||
T Consensus 353 ~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN 431 (474)
T cd07130 353 PGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVN 431 (474)
T ss_pred CCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEc
Confidence 689999999987766 9999999999999999999 99999999999999999999999987 899999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+.+. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 432 ~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 432 IGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred CCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 8654 4578999999999999999999999999999998764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-48 Score=343.88 Aligned_cols=189 Identities=29% Similarity=0.474 Sum_probs=177.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++++|+++++||...+.
T Consensus 297 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~ 374 (508)
T PLN02315 297 GQRCTTCR--RLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIES 374 (508)
T ss_pred CCCCCCCe--EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC
Confidence 89999965 9999999999999999999999999999999999999999999999999999999999999999975444
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHh--hcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSR--SIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~--~l~~G~v~iN 150 (197)
.|+|++|||+ +++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++ ++++|.|+||
T Consensus 375 ~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN 453 (508)
T PLN02315 375 EGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVN 453 (508)
T ss_pred CCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEc
Confidence 6899999999 599999999999999999999999 9999999999999999999999985 7999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++++
T Consensus 454 ~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~ 496 (508)
T PLN02315 454 IPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYG 496 (508)
T ss_pred CCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEecC
Confidence 8655 44789999999999999999999999999999988763
|
|
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-48 Score=345.25 Aligned_cols=189 Identities=26% Similarity=0.510 Sum_probs=176.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE-GATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.|+++++|||+++++++++.++|++++++ |+++++||..+.
T Consensus 315 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~ 392 (522)
T cd07123 315 GQKCSAAS--RAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDD 392 (522)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999 999999997543
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCC-CcceeEEeeCChHHHHHHHhhc--ceeE
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRR-YGLAAGIITNDLNTANTVSRSI--RAGI 146 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~-~gL~~~v~t~d~~~~~~~~~~l--~~G~ 146 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++ |||++||||+|.+++.++++++ ++|+
T Consensus 393 ~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~ 472 (522)
T cd07123 393 SVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGN 472 (522)
T ss_pred CCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcE
Confidence 368999999999999999999999999999999995 89985 9999999999999999999997 4999
Q ss_pred EEECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 147 IWANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 147 v~iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
|+||+.+. ..+.+||||+|.||+| +++|.+++++|++.|+++...
T Consensus 473 v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~~ 520 (522)
T cd07123 473 FYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKETF 520 (522)
T ss_pred EEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEec
Confidence 99998765 3468999999999996 999999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-48 Score=342.20 Aligned_cols=188 Identities=35% Similarity=0.517 Sum_probs=177.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++||++++||....
T Consensus 275 GQ~C~a~~--rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~ 352 (478)
T cd07085 275 GQRCMALS--VAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKV 352 (478)
T ss_pred CCCCCCCe--EEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999996421
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
.+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 353 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~ 432 (478)
T cd07085 353 PGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVG 432 (478)
T ss_pred CcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 368999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCC-CCCCCcCCCCCCCCC--CcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLAF-DNDCPYGGYKMSGFG--RDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~ 190 (197)
||++... .+.+||||+|.||+| +++|.+++++|++.|+|+..
T Consensus 433 iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 433 INVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred EcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9997553 468999999999999 57899999999999999875
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=338.76 Aligned_cols=186 Identities=35% Similarity=0.636 Sum_probs=178.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 235 GQ~C~a~~--rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~ 312 (429)
T cd07100 235 GQSCIAAK--RFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDG 312 (429)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||++
T Consensus 313 ~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 392 (429)
T cd07100 313 PGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGM 392 (429)
T ss_pred CCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 393 ~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 393 VKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 876788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=341.44 Aligned_cols=186 Identities=28% Similarity=0.532 Sum_probs=176.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||..
T Consensus 277 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--- 351 (472)
T TIGR03250 277 GQRCTAVK--RMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR--- 351 (472)
T ss_pred CCCCCCCc--EEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+||||+.
T Consensus 352 ~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~ 431 (472)
T TIGR03250 352 DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEV 431 (472)
T ss_pred CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred CCC-CCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 153 LAF-DNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
... .+.+||||+|.||+| +.+|.+++++|++.|+|++++
T Consensus 432 ~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 432 PGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred CCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence 653 356999999999999 567799999999999998764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-48 Score=344.64 Aligned_cols=191 Identities=26% Similarity=0.480 Sum_probs=178.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC--CEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG--ATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~~~~gg~~~ 78 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.|+++++||++++.+++++.++|++++++| +++++||...
T Consensus 315 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~ 392 (533)
T TIGR01236 315 GQKCSAAS--RLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYD 392 (533)
T ss_pred CCCCcCCe--eEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcC
Confidence 89999965 9999999999999999999999999999999999999999999999999999999987 7999999764
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE----------e-cCCCCcceeEEeeCChHHHHHHHhhcc--ee
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------A-NNRRYGLAAGIITNDLNTANTVSRSIR--AG 145 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~-n~~~~gL~~~v~t~d~~~~~~~~~~l~--~G 145 (197)
...|+|++|||+.+++++|.+++||+||||++|++|+ + |+++|||+++|||+|.+++.+++++++ +|
T Consensus 393 ~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G 472 (533)
T TIGR01236 393 DSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAG 472 (533)
T ss_pred CCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCc
Confidence 3468999999999999999999999999999999997 5 889999999999999999999999977 99
Q ss_pred EEEECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCCC
Q 038769 146 IIWANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 146 ~v~iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
+|+||+... ..+.+||||+|.||+| +++|.+++++|++.|+++....+
T Consensus 473 ~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~~~ 523 (533)
T TIGR01236 473 NFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETFVP 523 (533)
T ss_pred EEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEccc
Confidence 999998765 3468999999999998 99999999999999999888754
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-48 Score=341.32 Aligned_cols=189 Identities=35% Similarity=0.580 Sum_probs=179.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.+.++++|||+++.+++++.++|++|+++|+++++||.....
T Consensus 276 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 353 (478)
T cd07086 276 GQRCTTTR--RLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG 353 (478)
T ss_pred CCCCcCCe--EEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976432
Q ss_pred --CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhh--cceeEEE
Q 038769 81 --KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRS--IRAGIIW 148 (197)
Q Consensus 81 --~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~--l~~G~v~ 148 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.+++++ +++|+|+
T Consensus 354 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~ 433 (478)
T cd07086 354 GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVN 433 (478)
T ss_pred CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEE
Confidence 58999999999999999999999999999999999 99999999999999999999999999 9999999
Q ss_pred ECCCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 434 iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 434 VNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 477 (478)
T ss_pred ECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEeC
Confidence 999865 4578999999999999999999999999999998864
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-48 Score=339.92 Aligned_cols=187 Identities=35% Similarity=0.622 Sum_probs=176.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++++|+++++||....
T Consensus 256 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~ 333 (454)
T cd07101 256 GQLCVSIE--RIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPD 333 (454)
T ss_pred CCCcccCe--EEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 334 ~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~ 413 (454)
T cd07101 334 LGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNE 413 (454)
T ss_pred CCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECC
Confidence 257999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC---CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 152 YLA---FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 152 ~~~---~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+.. ..+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 414 ~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 414 GYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred CCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 754 34678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-48 Score=340.84 Aligned_cols=188 Identities=54% Similarity=0.949 Sum_probs=180.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.....
T Consensus 285 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 362 (481)
T cd07143 285 GQVCCAGS--RIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN 362 (481)
T ss_pred CCCCCCCc--EEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 363 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 442 (481)
T cd07143 363 EGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCY 442 (481)
T ss_pred CceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 443 ~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 443 NLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred CCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 77778899999999999999999999999999999865
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=339.64 Aligned_cols=184 Identities=36% Similarity=0.640 Sum_probs=176.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++|+++|+++++||..
T Consensus 261 GQ~C~a~~--~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--- 335 (453)
T cd07094 261 GQVCISVQ--RIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER--- 335 (453)
T ss_pred CCCCcCCe--EEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---
Confidence 89999976 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 336 ~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~ 415 (453)
T cd07094 336 DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415 (453)
T ss_pred CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCC
Confidence 58899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 416 ~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 416 SAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 654 5789999999999999999999999999999863
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-48 Score=340.73 Aligned_cols=191 Identities=40% Similarity=0.754 Sum_probs=181.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 274 GQ~C~a~~--~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 351 (482)
T cd07119 274 GQVCSAGS--RLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTG 351 (482)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 352 ~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 431 (482)
T cd07119 352 DELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVW 431 (482)
T ss_pred ccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
||++....+.+||||+|.||+|+++|++|+++|++.|++++++.+
T Consensus 432 iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~~~ 476 (482)
T cd07119 432 INDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLSP 476 (482)
T ss_pred ECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecCC
Confidence 999876678899999999999999999999999999999988753
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-48 Score=341.11 Aligned_cols=187 Identities=57% Similarity=1.019 Sum_probs=179.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.....
T Consensus 282 GQ~C~a~~--rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~ 359 (476)
T cd07091 282 GQCCCAGS--RIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGS 359 (476)
T ss_pred CCCCcCCc--EEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 360 ~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~ 439 (476)
T cd07091 360 KGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTY 439 (476)
T ss_pred CCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 440 ~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 440 NVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred CCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 7777899999999999999999999999999999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-48 Score=338.80 Aligned_cols=187 Identities=36% Similarity=0.618 Sum_probs=177.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+
T Consensus 258 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~ 335 (455)
T cd07120 258 GQFCMAGS--RVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTE 335 (455)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+|
T Consensus 336 ~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~i 415 (455)
T cd07120 336 GLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWI 415 (455)
T ss_pred cCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEE
Confidence 258999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
|++....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 416 N~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 416 NDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred CCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 9987777889999999999999999999999999999863
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-48 Score=338.05 Aligned_cols=186 Identities=34% Similarity=0.584 Sum_probs=177.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.....
T Consensus 257 GQ~C~a~~--ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 334 (453)
T cd07099 257 GQTCISVE--RVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNG 334 (453)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC
Confidence 89999976 9999999999999999999999999999999999999999999999999999999999999999976423
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||++
T Consensus 335 ~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~ 414 (453)
T cd07099 335 GGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDV 414 (453)
T ss_pred CCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 415 ~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 415 LLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred CCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 65 3579999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-48 Score=337.64 Aligned_cols=189 Identities=42% Similarity=0.818 Sum_probs=179.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 255 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 332 (457)
T cd07090 255 GQVCSNGT--RVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVP 332 (457)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997531
Q ss_pred ----CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 80 ----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 80 ----~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|.|
T Consensus 333 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v 412 (457)
T cd07090 333 EDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412 (457)
T ss_pred cccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeE
Confidence 258999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 148 WANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 148 ~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+||++....+.+||||+|.||+|+++|.+++++|++.|+++++.
T Consensus 413 ~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 413 WINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred EECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 99998776778999999999999999999999999999998764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=337.00 Aligned_cols=188 Identities=46% Similarity=0.896 Sum_probs=179.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||.....
T Consensus 257 GQ~C~a~~--~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 334 (453)
T cd07115 257 GQMCTAGS--RLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGA 334 (453)
T ss_pred CCCCCCCe--EEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999976 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|+|+||++
T Consensus 335 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~ 414 (453)
T cd07115 335 RGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTY 414 (453)
T ss_pred CCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 415 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 415 NRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred CCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 77778899999999999999999999999999999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-48 Score=339.78 Aligned_cols=188 Identities=49% Similarity=0.869 Sum_probs=178.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|++++++ +++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 284 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 361 (484)
T cd07144 284 GQNCTATS--RIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAP 361 (484)
T ss_pred CCCCCCCc--eEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCc
Confidence 89999966 9999999999999999999985 99999999999999999999999999999999999999999997642
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 362 ~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~ 441 (484)
T cd07144 362 EGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVW 441 (484)
T ss_pred ccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
||+.....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 442 iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 442 INSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred ECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 999877677899999999999999999999999999999865
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-48 Score=339.72 Aligned_cols=186 Identities=39% Similarity=0.727 Sum_probs=176.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 275 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 352 (473)
T cd07097 275 GQRCTASS--RLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKR 352 (473)
T ss_pred CCCCcCCe--eEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 353 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN 432 (473)
T cd07097 353 PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVN 432 (473)
T ss_pred CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEEC
Confidence 258899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEE
Q 038769 151 CYLA-FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~ 188 (197)
++.. ..+.+||||+|.||+| +++|.+++++|++.|+|+
T Consensus 433 ~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 433 LPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred CCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 8765 3478999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=339.69 Aligned_cols=190 Identities=42% Similarity=0.756 Sum_probs=180.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 291 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~ 368 (503)
T PLN02467 291 GQICSATS--RLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEH 368 (503)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999965 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 369 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 448 (503)
T PLN02467 369 LKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWIN 448 (503)
T ss_pred CCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 258999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
++....+.+||||+|.||+|+++|.+++++|++.|++++...
T Consensus 449 ~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~~ 490 (503)
T PLN02467 449 CSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYIS 490 (503)
T ss_pred CCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEecC
Confidence 987666789999999999999999999999999999988643
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-48 Score=337.47 Aligned_cols=186 Identities=41% Similarity=0.793 Sum_probs=177.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||....
T Consensus 260 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~ 337 (456)
T cd07110 260 GQICSATS--RLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAH 337 (456)
T ss_pred CCCCCCCc--eEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 338 ~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 417 (456)
T cd07110 338 LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417 (456)
T ss_pred cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 368999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++....+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 418 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 418 CSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 98766788999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=337.32 Aligned_cols=185 Identities=40% Similarity=0.660 Sum_probs=177.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++.+||++++.+++++.++|++++++|+++++||..
T Consensus 271 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~--- 345 (465)
T cd07151 271 GQICMAIN--RIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA--- 345 (465)
T ss_pred CCCCcCCc--EEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 346 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 425 (465)
T cd07151 346 EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQ 425 (465)
T ss_pred CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCC
Confidence 58899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
+.. .+.+||||+|.||+|+++|++++++|++.|+++++
T Consensus 426 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 426 PVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred CCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 764 47899999999999999999999999999999764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=337.05 Aligned_cols=185 Identities=30% Similarity=0.527 Sum_probs=175.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...
T Consensus 262 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-- 337 (455)
T cd07148 262 GQVCVSVQ--RVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL-- 337 (455)
T ss_pred CCCccCCe--EEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.++|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 338 ~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~ 417 (455)
T cd07148 338 SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDH 417 (455)
T ss_pred CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCC
Confidence 47899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
... .+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 418 ~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 418 TAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 643 3578999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=340.17 Aligned_cols=189 Identities=35% Similarity=0.586 Sum_probs=178.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++++|+++++||....
T Consensus 292 GQ~C~a~~--rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~ 369 (524)
T PRK09407 292 GQLCISIE--RIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPD 369 (524)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999987432
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||+
T Consensus 370 ~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~ 449 (524)
T PRK09407 370 LGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNE 449 (524)
T ss_pred CCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 257999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC---CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLA---FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~---~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 450 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 450 GYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred CCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 754 3467899999999999999999999999999998764
|
|
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=336.41 Aligned_cols=187 Identities=41% Similarity=0.747 Sum_probs=178.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 263 GQ~C~a~~--~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~ 340 (459)
T cd07089 263 GQGCALTT--RLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAG 340 (459)
T ss_pred CCcccCCe--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 341 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN 420 (459)
T cd07089 341 LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGIN 420 (459)
T ss_pred CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEEC
Confidence 268999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+.....+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 421 ~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 421 GGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred CCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 988777889999999999999999999999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=336.34 Aligned_cols=186 Identities=46% Similarity=0.853 Sum_probs=177.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 266 GQ~C~a~~--~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~ 343 (462)
T cd07112 266 GEVCSAGS--RLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLT 343 (462)
T ss_pred CCCCCCCe--eEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 344 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN 423 (462)
T cd07112 344 ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVN 423 (462)
T ss_pred CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEEC
Confidence 258899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 424 ~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 424 CFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred CCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 98777788999999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=335.40 Aligned_cols=186 Identities=41% Similarity=0.790 Sum_probs=178.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+
T Consensus 259 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 336 (454)
T cd07118 259 GECCNSGS--RLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLAS 336 (454)
T ss_pred CCCCCCCc--eEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||+
T Consensus 337 ~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~ 416 (454)
T cd07118 337 AAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNT 416 (454)
T ss_pred CCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECC
Confidence 368999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 417 ~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 417 FLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred CCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 8877788999999999999999999999999999985
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=337.25 Aligned_cols=187 Identities=37% Similarity=0.698 Sum_probs=177.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++.+|||+++.+++++.++|++++++| ++++||....
T Consensus 299 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~- 374 (494)
T PRK09847 299 GQVCIAGT--RLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG- 374 (494)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCC-
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999 9999987643
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.+.|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 375 ~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~ 454 (494)
T PRK09847 375 LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNY 454 (494)
T ss_pred CCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 57899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++..
T Consensus 455 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 455 NDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL 493 (494)
T ss_pred CCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence 776778999999999999999999999999999998653
|
|
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=334.45 Aligned_cols=186 Identities=31% Similarity=0.530 Sum_probs=177.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...
T Consensus 255 GQ~C~a~~--~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~ 332 (452)
T cd07102 255 GQSCCSIE--RIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPE 332 (452)
T ss_pred CCCCcCCc--EEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999998652
Q ss_pred -CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 79 -GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 79 -~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
+..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+|
T Consensus 333 ~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~i 412 (452)
T cd07102 333 DKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFM 412 (452)
T ss_pred CCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEE
Confidence 2368999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
|++....+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 413 N~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 413 NRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred CCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 998776778999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-47 Score=334.95 Aligned_cols=189 Identities=42% Similarity=0.743 Sum_probs=178.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++|+++|+++++||....
T Consensus 275 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 352 (478)
T cd07131 275 GQRCTATS--RLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTG 352 (478)
T ss_pred CCCCCCCe--EEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 353 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~ 432 (478)
T cd07131 353 GGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITY 432 (478)
T ss_pred ccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEE
Confidence 358999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCC-CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLA-FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~-~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++.. ..+.+||||+|.||+| +++|.+++++|++.|+|++++
T Consensus 433 iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 433 VNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred ECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEeC
Confidence 999876 3578999999999999 888999999999999998865
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-47 Score=335.08 Aligned_cols=186 Identities=44% Similarity=0.696 Sum_probs=177.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 273 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~ 350 (468)
T cd07088 273 GQVCTCAE--RVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEG 350 (468)
T ss_pred CcCCcCCe--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 351 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~ 430 (468)
T cd07088 351 EKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINR 430 (468)
T ss_pred CCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 368999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
+....+..||||+|.||+|+++|++++++|++.|+|+
T Consensus 431 ~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 431 ENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 8776667799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=333.64 Aligned_cols=184 Identities=34% Similarity=0.612 Sum_probs=175.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||..
T Consensus 260 GQ~C~a~~--~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~--- 334 (452)
T cd07147 260 GQSCISVQ--RVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR--- 334 (452)
T ss_pred CCCCcCCc--EEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+.
T Consensus 335 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~ 414 (452)
T cd07147 335 DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDV 414 (452)
T ss_pred CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCC
Confidence 48899999999999999999999999999999999 9999999999999999999999999999999999997
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+.. .+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 415 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 415 PTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 653 4789999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=333.90 Aligned_cols=187 Identities=44% Similarity=0.849 Sum_probs=178.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||....
T Consensus 259 GQ~C~a~~--~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~ 336 (457)
T cd07114 259 GQTCVAGS--RLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSG 336 (457)
T ss_pred CCCCCCCc--eEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997542
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|+|+
T Consensus 337 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~ 416 (457)
T cd07114 337 ADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVW 416 (457)
T ss_pred ccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 417 iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 417 VNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred ECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 99987777889999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-47 Score=335.89 Aligned_cols=190 Identities=28% Similarity=0.427 Sum_probs=178.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|++++++|+++++++..
T Consensus 295 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~--- 368 (496)
T PLN00412 295 GQRCTAVK--VVLVMESVADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR--- 368 (496)
T ss_pred CCCCccCe--EEEEcHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---
Confidence 89999966 999999999999999999999999999987 789999999999999999999999999999987743
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 369 ~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~ 448 (496)
T PLN00412 369 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 448 (496)
T ss_pred CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCCC
Q 038769 153 LA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPW 196 (197)
Q Consensus 153 ~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~ 196 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+++++++...|
T Consensus 449 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~~~~~ 493 (496)
T PLN00412 449 PARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493 (496)
T ss_pred CCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEecCCCCc
Confidence 64 446899999999999999999999999999999988765443
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=335.04 Aligned_cols=185 Identities=39% Similarity=0.751 Sum_probs=176.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||....
T Consensus 276 GQ~C~a~~--~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 353 (471)
T cd07139 276 GQVCVALT--RILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAG 353 (471)
T ss_pred CCCCcCCc--EEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 354 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN 433 (471)
T cd07139 354 LDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVN 433 (471)
T ss_pred CCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence 258999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 434 ~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 434 GFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred CCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 976 5678999999999999999999999999999986
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-47 Score=334.60 Aligned_cols=186 Identities=26% Similarity=0.393 Sum_probs=174.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.+. +++||++++++++++.++|++++++ +++++||..+ .
T Consensus 249 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~~-~ 323 (484)
T PLN02203 249 GQACIAID--YVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSID-E 323 (484)
T ss_pred CCccccCC--eEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCcC-C
Confidence 89999966 9999999999999999999999999999875 6899999999999999999999887 6899998753 3
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||++
T Consensus 324 ~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~ 403 (484)
T PLN02203 324 KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDA 403 (484)
T ss_pred CCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCc
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus 404 ~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 404 IIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred ccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 54 3478999999999999999999999999999998774
|
|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-47 Score=332.40 Aligned_cols=185 Identities=37% Similarity=0.672 Sum_probs=177.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++. +|+++++||.....
T Consensus 257 GQ~C~a~~--~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~ 333 (450)
T cd07092 257 GQDCTAAC--RVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEG 333 (450)
T ss_pred CCCCCCCc--EEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999998 99999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||++
T Consensus 334 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~ 413 (450)
T cd07092 334 PGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTH 413 (450)
T ss_pred CccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCC
Confidence 68999999999999999999999999999999999 8999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 414 ~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 414 IPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 777788999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-47 Score=336.98 Aligned_cols=188 Identities=39% Similarity=0.711 Sum_probs=177.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++|+++++ |+++++||...+.
T Consensus 312 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~ 388 (512)
T cd07124 312 GQKCSACS--RVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL 388 (512)
T ss_pred CCccccce--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC
Confidence 89999966 99999999999999999999999999999999999999999999999999999988 8899999976532
Q ss_pred --CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 --KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 --~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 389 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN 468 (512)
T cd07124 389 AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYAN 468 (512)
T ss_pred CCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence 68999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 151 CYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+... ..+.+||||+|.||+| +++|.+++++|+++|+|++++
T Consensus 469 ~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 469 RKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred CCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEeC
Confidence 8765 3367999999999999 788999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-47 Score=333.18 Aligned_cols=188 Identities=35% Similarity=0.621 Sum_probs=177.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||....
T Consensus 263 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 340 (465)
T cd07098 263 GQNCIGIE--RVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPH 340 (465)
T ss_pred CCCCcCCc--EEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+
T Consensus 341 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~ 420 (465)
T cd07098 341 PEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVA 420 (465)
T ss_pred CcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
||++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 421 iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 421 INDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred ECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999764 347899999999999999999999999999999875
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-47 Score=332.06 Aligned_cols=184 Identities=34% Similarity=0.574 Sum_probs=175.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..
T Consensus 250 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--- 324 (443)
T cd07152 250 GQICMAAG--RHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY--- 324 (443)
T ss_pred CCCCcCCe--eEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 325 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 404 (443)
T cd07152 325 DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQ 404 (443)
T ss_pred CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCC
Confidence 48999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCC-CCCCcCCCCCCCCC-CcchHHHHHhcccccEEEE
Q 038769 153 LAFD-NDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~~-~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~ 189 (197)
.... +.+||||+|.||+| +++|.+++++|++.|++++
T Consensus 405 ~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 405 TVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred CCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 7643 68999999999999 8889999999999999853
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-47 Score=333.30 Aligned_cols=185 Identities=37% Similarity=0.643 Sum_probs=176.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..+
T Consensus 263 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~-- 338 (456)
T cd07145 263 GQVCNAVK--RILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD-- 338 (456)
T ss_pred CCCCccCe--eEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 339 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~ 418 (456)
T cd07145 339 EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDS 418 (456)
T ss_pred CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 38999999999999999999999999999999999 9999999999999999999999999999999999987
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
... .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 419 ~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 419 TRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred CCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 653 4689999999999999999999999999999863
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=334.28 Aligned_cols=184 Identities=40% Similarity=0.706 Sum_probs=175.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 286 GQ~C~a~~--ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~ 363 (480)
T cd07111 286 GQVCCAGS--RLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS 363 (480)
T ss_pred CCcCcCCc--eEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999865334
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 364 ~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~ 443 (480)
T cd07111 364 KGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGH 443 (480)
T ss_pred CCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCC
Confidence 68999999999999999999999999999999999 8999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKS 186 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 186 (197)
....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 444 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 444 NLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 7777789999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-47 Score=333.02 Aligned_cols=183 Identities=45% Similarity=0.841 Sum_probs=174.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 273 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 350 (467)
T TIGR01804 273 GQVCSNGT--RVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPER 350 (467)
T ss_pred CCCCCCCC--EEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 351 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~ 430 (467)
T TIGR01804 351 EGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVW 430 (467)
T ss_pred ccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhccccc
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVK 185 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k 185 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 431 iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 431 INDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred ECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-47 Score=335.09 Aligned_cols=188 Identities=32% Similarity=0.595 Sum_probs=176.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++++||.....
T Consensus 313 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~ 389 (511)
T TIGR01237 313 GQKCSACS--RVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPS 389 (511)
T ss_pred CCCcccce--EEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999998 89998865434
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 390 ~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~ 469 (511)
T TIGR01237 390 EGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRT 469 (511)
T ss_pred CCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC--CCCCCcCCCCCCCCCC-cchHHHHHhcccccEEEEeC
Q 038769 153 LAF--DNDCPYGGYKMSGFGR-DCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~--~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~ 191 (197)
... .+.+||||+|.||+|+ ++|.+++++|++.|+|+.++
T Consensus 470 ~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 470 ITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTENI 511 (511)
T ss_pred CCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEeC
Confidence 652 3578999999999995 78999999999999998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-47 Score=331.17 Aligned_cols=184 Identities=39% Similarity=0.681 Sum_probs=175.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||..
T Consensus 259 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--- 333 (451)
T cd07150 259 GQICMSAS--RIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY--- 333 (451)
T ss_pred CCCCCCCe--eEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 334 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~ 413 (451)
T cd07150 334 DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413 (451)
T ss_pred CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCC
Confidence 48899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 414 ~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 414 TILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 764 4789999999999999999999999999999853
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-47 Score=332.02 Aligned_cols=186 Identities=38% Similarity=0.686 Sum_probs=176.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++++ +|+++++||....
T Consensus 257 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~ 334 (457)
T cd07108 257 GQSCTAGS--RLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPG 334 (457)
T ss_pred CCCCCCCe--EEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCc
Confidence 89999966 99999999999999999999999999999999999999999999999999999998 9999999997542
Q ss_pred ----CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 80 ----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 80 ----~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|
T Consensus 335 ~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v 414 (457)
T cd07108 335 EGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWV 414 (457)
T ss_pred cCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceE
Confidence 358999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCcCCCCCCCCCCcchHHH-HHhcccccEEE
Q 038769 148 WANCYLAFDNDCPYGGYKMSGFGRDCGLDS-LHKYLHVKSVV 188 (197)
Q Consensus 148 ~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~-~~~f~~~k~v~ 188 (197)
+||++....+.+||||+|.||+|+++|.++ +++|++.|+|+
T Consensus 415 ~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 415 QVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred EECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 999997777889999999999999999866 79999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-47 Score=330.79 Aligned_cols=183 Identities=33% Similarity=0.551 Sum_probs=174.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++++|+++++||..
T Consensus 258 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~--- 332 (451)
T cd07146 258 GQRCTAVK--RILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR--- 332 (451)
T ss_pred CCCCCCCc--eEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 333 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~ 412 (451)
T cd07146 333 QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEV 412 (451)
T ss_pred CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCC
Confidence 58899999999999999999999999999999999 9999999999999999999999999999999999997
Q ss_pred CC-CCCCCCcCCCCCCCC-CCcchHHHHHhcccccEEE
Q 038769 153 LA-FDNDCPYGGYKMSGF-GRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~-~~~~~pfGG~~~SG~-G~~~g~~~~~~f~~~k~v~ 188 (197)
+. ..+.+||||+|.||+ |+++|++|+++|++.|+++
T Consensus 413 ~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 413 PGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 54 347899999999995 8999999999999999985
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-47 Score=328.81 Aligned_cols=183 Identities=24% Similarity=0.401 Sum_probs=172.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+| ++++++|||+++++++++.++|+++++ |+++++||... .
T Consensus 239 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~ 313 (432)
T cd07137 239 GQACIAPD--YVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E 313 (432)
T ss_pred CCcccCCC--EEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence 89999966 9999999999999999999999999999 468899999999999999999999998 89999998653 3
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
+|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999997
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 65 3478999999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=333.34 Aligned_cols=185 Identities=26% Similarity=0.353 Sum_probs=171.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |+|||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||...
T Consensus 289 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~ 365 (513)
T cd07128 289 GQKCTAIR--RAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFE 365 (513)
T ss_pred CCcccCCc--eEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCcccc
Confidence 89999955 999999999999999999999999999999999999999999999999999999988 9999999652
Q ss_pred -----CCCCceEecEEEecCCCC--CcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcc
Q 038769 79 -----GQKGYYIEPTIFTNVKED--MLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIR 143 (197)
Q Consensus 79 -----~~~g~~~~Ptv~~~~~~~--~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~ 143 (197)
...|+|++|||+.+++++ |.+++||+||||++|++|+ +|+++|||++||||+|.+++.+++++++
T Consensus 366 ~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~ 445 (513)
T cd07128 366 VVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAA 445 (513)
T ss_pred ccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHH
Confidence 135899999999988874 8999999999999999999 9999999999999999999999999997
Q ss_pred --eeEEEECCCCC---------CCCCCCcCCCCCCCCCCcc-hHHHHHhcccccEEE
Q 038769 144 --AGIIWANCYLA---------FDNDCPYGGYKMSGFGRDC-GLDSLHKYLHVKSVV 188 (197)
Q Consensus 144 --~G~v~iN~~~~---------~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~ 188 (197)
+|+||||+... ..+.+||||+|.||+|++. |.+++++|++.|+|.
T Consensus 446 ~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 446 PYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred hhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 99999998742 2467899999999999995 799999999999984
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=341.25 Aligned_cols=186 Identities=22% Similarity=0.297 Sum_probs=171.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||....
T Consensus 289 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~- 365 (663)
T TIGR02278 289 GQKCTAIR--RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL- 365 (663)
T ss_pred CCCccCCc--eEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-
Confidence 89999955 999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCceEecEEEecCCCCC-cccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhc--ceeEEEE
Q 038769 81 KGYYIEPTIFTNVKEDM-LIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSI--RAGIIWA 149 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~-~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l--~~G~v~i 149 (197)
.|+|++|||+.+++++| .+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++ ++|+|+|
T Consensus 366 ~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~I 445 (663)
T TIGR02278 366 DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHI 445 (663)
T ss_pred CCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEE
Confidence 58999999999988876 799999999999999999 999999999999999999999999999 7999999
Q ss_pred -CCCC--------CCCCCCCcCCCCCCCCCCcc-hHHHHHhcccccEEEE
Q 038769 150 -NCYL--------AFDNDCPYGGYKMSGFGRDC-GLDSLHKYLHVKSVVT 189 (197)
Q Consensus 150 -N~~~--------~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~ 189 (197)
|++. ...+.+||||+|.||+|+++ |.+++++|++.|+|..
T Consensus 446 nN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 446 LNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 6421 12367899999999999994 6899999999999854
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=326.64 Aligned_cols=184 Identities=39% Similarity=0.675 Sum_probs=175.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|++++.++++|+|.++++.+||++++.+++++.+++++++++|+++++||..
T Consensus 239 GQ~C~a~~--~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 239 GQICMAAG--RILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred CCCcccCc--EEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 89999977 9999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+.. .+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 764 4789999999999999999999999999999853
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=329.80 Aligned_cols=185 Identities=41% Similarity=0.737 Sum_probs=175.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|||.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 270 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~ 347 (466)
T cd07138 270 GQSCNAPT--RMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPE 347 (466)
T ss_pred CCCCcCCc--EEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+|
T Consensus 348 ~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~i 427 (466)
T cd07138 348 GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHI 427 (466)
T ss_pred cCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEE
Confidence 258999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
|+.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 428 N~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 428 NGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred CCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 9864 4578999999999999999999999999999885
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=328.57 Aligned_cols=186 Identities=37% Similarity=0.689 Sum_probs=175.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|++++++|+++++||....
T Consensus 257 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~ 333 (454)
T cd07109 257 GQTCSAGS--RLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEG 333 (454)
T ss_pred CCCCccCc--EEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcc
Confidence 89999966 999999999999999999999999999986 68999999999999999999999999999999987532
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|+|+|
T Consensus 334 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~i 413 (454)
T cd07109 334 APAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFV 413 (454)
T ss_pred cCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEE
Confidence 358999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 150 NCYL-AFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 150 N~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
|++. ...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 414 N~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 414 NNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred CCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 9987 455789999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-46 Score=328.90 Aligned_cols=189 Identities=24% Similarity=0.356 Sum_probs=174.0
Q ss_pred CceeeecCCCEEEEeCccH-HHHHHHHHHHHhccccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~-d~f~~~l~~~~~~l~vG~p~-~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 78 (197)
||.|++++ |||||+++| |+|+++|+++++++++|+|. ++++++|||+++.+++++.+++++++++|+++++||...
T Consensus 274 GQ~C~a~~--rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 351 (487)
T PRK09457 274 GQRCTCAR--RLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQL 351 (487)
T ss_pred CCCCCCCc--eEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc
Confidence 89999965 999999998 99999999999999999996 788999999999999999999999999999999988654
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
+..|+|++|||+ +++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 352 ~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN 430 (487)
T PRK09457 352 QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWN 430 (487)
T ss_pred CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEE
Confidence 446899999999 799999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
+... ..+.+||||+|.||+|+++|..+ .+|++.|+++++.++
T Consensus 431 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 431 KPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred CCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEeccc
Confidence 8765 44679999999999999999555 559999999988633
|
|
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-46 Score=326.65 Aligned_cols=183 Identities=40% Similarity=0.680 Sum_probs=175.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |+|||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++.+|+++++||..
T Consensus 261 GQ~C~a~~--~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--- 335 (453)
T cd07149 261 GQVCISVQ--RIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR--- 335 (453)
T ss_pred CCCCCCCc--eEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 89999977 9999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 336 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~ 415 (453)
T cd07149 336 DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDS 415 (453)
T ss_pred CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCC
Confidence 47899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
+.. .+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 416 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 416 STFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 753 478999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=325.29 Aligned_cols=185 Identities=26% Similarity=0.481 Sum_probs=175.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|++++++++.|+| .+.++++||++++.+++++.++|++++++|+++++||....
T Consensus 237 GQ~C~a~~--rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~ 314 (433)
T cd07134 237 GQTCIAPD--YVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA 314 (433)
T ss_pred CCcccCCc--EEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC
Confidence 89999966 9999999999999999999999988887 88889999999999999999999999999999999997643
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|.|+||+
T Consensus 315 -~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 393 (433)
T cd07134 315 -AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVND 393 (433)
T ss_pred -CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 58999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 152 YLA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 152 ~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++. ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus 394 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 394 VVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 865 3478999999999999999999999999999985
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=325.54 Aligned_cols=186 Identities=43% Similarity=0.755 Sum_probs=178.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.....
T Consensus 257 GQ~C~a~~--~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~ 334 (451)
T cd07103 257 GQTCVCAN--RIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGL 334 (451)
T ss_pred CCCCCCCe--eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.++++|+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|+|+||++
T Consensus 335 ~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~ 414 (451)
T cd07103 335 GGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTG 414 (451)
T ss_pred CCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
....+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 415 ~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 415 LISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred CCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 877788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-46 Score=326.38 Aligned_cols=188 Identities=29% Similarity=0.434 Sum_probs=176.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||+++ |+|+++|+++++++++|+|.+++++||||+++++++++.++|++|+++|+++++||...
T Consensus 275 GQ~C~a~~--rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~ 351 (477)
T TIGR01722 275 GQRCMAIS--AAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKV 351 (477)
T ss_pred CCCCCCCe--EEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999955 99999999 99999999999999999999999999999999999999999999999999999998752
Q ss_pred C--CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 79 G--QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 79 ~--~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
. ..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+
T Consensus 352 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~ 431 (477)
T TIGR01722 352 DGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVG 431 (477)
T ss_pred CCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEE
Confidence 1 258999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCC-CCCCCCcCCCCCCCCC--CcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLA-FDNDCPYGGYKMSGFG--RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++.. ..+.+||||+|.||+| +++|.+++++|++.|+|++.+
T Consensus 432 iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 432 VNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred ECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 998654 3478999999999999 578999999999999998763
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-46 Score=324.32 Aligned_cols=184 Identities=24% Similarity=0.379 Sum_probs=172.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||....
T Consensus 238 GQ~C~a~~--rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 313 (434)
T cd07133 238 GQTCVAPD--YVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED 313 (434)
T ss_pred CCcccCCC--EEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC
Confidence 89999966 999999999999999999999999886 4678999999999999999999999999999999986542
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||
T Consensus 314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN 393 (434)
T cd07133 314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN 393 (434)
T ss_pred CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 368999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 151 CYLA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 151 ~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 394 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 394 DTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 9864 4478999999999999999999999999999984
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-46 Score=324.39 Aligned_cols=183 Identities=26% Similarity=0.386 Sum_probs=170.2
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++ ++|+|+++|+++++++++|+|.++++.+||++++.+++++.+++++++++|+++++||...+
T Consensus 237 GQ~C~a~~--rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~ 314 (431)
T cd07095 237 GQRCTCAR--RLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV 314 (431)
T ss_pred CCCCCCCe--EEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence 89999966 9999999 99999999999999999999999999999999999999999999999999999999997544
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.+|+|++|||+ +++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~ 393 (431)
T cd07095 315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR 393 (431)
T ss_pred CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence 47999999999 689999999999999999999999 899999999999999999999999999999999998
Q ss_pred CCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEE
Q 038769 152 YLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSV 187 (197)
Q Consensus 152 ~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 187 (197)
+.. ..+.+||||+|.||+|+++|.+++++| +.|++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~-~~~~~ 429 (431)
T cd07095 394 PTTGASSTAPFGGVGLSGNHRPSAYYAADYC-AYPVA 429 (431)
T ss_pred CCCCCCCCCCCCCcccccCCCCChHHHHHHH-hhhhc
Confidence 765 446799999999999999999999955 44544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=329.27 Aligned_cols=187 Identities=38% Similarity=0.649 Sum_probs=174.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++. ++||++++.+++++.++|++++++ +++++||.....
T Consensus 317 GQ~C~a~~--rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~ 392 (514)
T PRK03137 317 GQKCSACS--RAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDS 392 (514)
T ss_pred CCCCccCe--EEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCC
Confidence 89999966 99999999999999999999999999999988 999999999999999999999888 599999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+.
T Consensus 393 ~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~ 472 (514)
T PRK03137 393 KGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRG 472 (514)
T ss_pred CceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999987
Q ss_pred CC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 153 LA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.. ..+.+||||+|.||+| +++|.+++++|++.|+|+..+
T Consensus 473 ~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~~ 514 (514)
T PRK03137 473 CTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEMF 514 (514)
T ss_pred CCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEeC
Confidence 54 3467899999999999 689999999999999997653
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=327.49 Aligned_cols=187 Identities=30% Similarity=0.620 Sum_probs=175.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++++||.....
T Consensus 300 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~ 376 (500)
T cd07083 300 GQKCSAAS--RLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEG 376 (500)
T ss_pred CCCCCCCe--eEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999987 99999976544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 377 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 456 (500)
T cd07083 377 EGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYIN 456 (500)
T ss_pred CCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEC
Confidence 68999999999999999999999999999999997 89999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEe
Q 038769 151 CYLAF--DNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 151 ~~~~~--~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 190 (197)
+++.. .+.+||||+|.||+| +++|.+++++|++.|+++.+
T Consensus 457 ~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 457 RKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred CCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 98653 357899999999999 68899999999999999764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-47 Score=332.17 Aligned_cols=185 Identities=38% Similarity=0.724 Sum_probs=173.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCC---ce
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGG---KT 77 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg---~~ 77 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++||++++|| ..
T Consensus 266 GQ~C~a~~--~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 343 (462)
T PF00171_consen 266 GQSCTAPS--RVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEA 343 (462)
T ss_dssp GTSTTSEE--EEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSB
T ss_pred cccccccc--cccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccc
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999999 23
Q ss_pred eCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 78 VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 78 ~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
....|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+|
T Consensus 344 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~i 423 (462)
T PF00171_consen 344 DPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWI 423 (462)
T ss_dssp CSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEE
T ss_pred cccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceee
Confidence 33579999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCcCCCCCCCCCCcchHHHHHhcccccEE
Q 038769 150 NCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYLHVKSV 187 (197)
Q Consensus 150 N~~~~~~~~-~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 187 (197)
|+++..... +||||+|.||+|+++|.+++++|++.|+|
T Consensus 424 N~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 424 NDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp SSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred cCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999874433 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=323.41 Aligned_cols=187 Identities=45% Similarity=0.831 Sum_probs=177.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 257 GQ~C~a~~--~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 334 (455)
T cd07093 257 GEVCLAGS--RILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPEL 334 (455)
T ss_pred CCCcCCCc--eEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997542
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|+.|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 335 ~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~ 414 (455)
T cd07093 335 PDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVW 414 (455)
T ss_pred ccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 258999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
||++....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 415 iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 415 VNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred ECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 99988777789999999999999999999999999999863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-46 Score=338.28 Aligned_cols=186 Identities=22% Similarity=0.288 Sum_probs=171.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |+|||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||...
T Consensus 293 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~ 369 (675)
T PRK11563 293 GQKCTAIR--RAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFE 369 (675)
T ss_pred CCccccce--eEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCccccc
Confidence 89999955 999999999999999999999999999999999999999999999999999999999 9999999531
Q ss_pred -----CCCCceEecEEEecCCC--CCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcc
Q 038769 79 -----GQKGYYIEPTIFTNVKE--DMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIR 143 (197)
Q Consensus 79 -----~~~g~~~~Ptv~~~~~~--~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~ 143 (197)
...|+|++|||+.++++ ++.+++||+||||++|++|+ +|+++|||++||||+|.+++.+++++++
T Consensus 370 ~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~ 449 (675)
T PRK11563 370 VVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAA 449 (675)
T ss_pred ccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHH
Confidence 12599999999999998 57899999999999999999 9999999999999999999999999997
Q ss_pred --eeEEEECCCCC---------CCCCCCcCCCCCCCCCCcc-hHHHHHhcccccEEEE
Q 038769 144 --AGIIWANCYLA---------FDNDCPYGGYKMSGFGRDC-GLDSLHKYLHVKSVVT 189 (197)
Q Consensus 144 --~G~v~iN~~~~---------~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~ 189 (197)
+|.||||+.+. ..+.+||||+|.||+|++. |.+++++|++.|+|..
T Consensus 450 ~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 450 PWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred hcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 99999998531 1368899999999999995 6999999999999854
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=326.39 Aligned_cols=184 Identities=24% Similarity=0.415 Sum_probs=171.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |+|||++++|+|+++|++++++++ |++.++++++||++++.+++++.++|+ ++|+++++||..+ .
T Consensus 246 GQ~C~A~~--~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~~-~ 318 (493)
T PTZ00381 246 GQTCVAPD--YVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEVD-I 318 (493)
T ss_pred CCcCCCCC--EEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCcC-C
Confidence 89999987 999999999999999999999995 766678899999999999999999996 3688999999764 3
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.++|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+.+.++++++++|.|+||+.
T Consensus 319 ~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~ 398 (493)
T PTZ00381 319 ENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDC 398 (493)
T ss_pred CCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 68899999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 399 ~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 399 VFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred cccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 64 4578999999999999999999999999999998774
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=324.21 Aligned_cols=185 Identities=33% Similarity=0.494 Sum_probs=176.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...
T Consensus 279 GQ~C~a~~--~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~-- 354 (473)
T cd07082 279 GQRCTAIK--RVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-- 354 (473)
T ss_pred CCcCCCCe--EEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--
Confidence 89999976 99999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 355 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 434 (473)
T cd07082 355 GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSK 434 (473)
T ss_pred CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCC
Confidence 48999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
... .+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 435 ~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 435 CQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred CCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 753 4678999999999999999999999999999975
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=322.52 Aligned_cols=181 Identities=29% Similarity=0.501 Sum_probs=170.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++++||....
T Consensus 237 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~- 307 (449)
T cd07136 237 GQTCVAPD--YVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR- 307 (449)
T ss_pred CCcccCCC--EEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC-
Confidence 89999966 999999999999999999999999999987 88999999999999999999764 8999997532
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
+|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 308 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~ 387 (449)
T cd07136 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDT 387 (449)
T ss_pred CCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999987
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 388 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 388 IMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred cccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 64 347899999999999999999999999999999877
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=322.15 Aligned_cols=181 Identities=27% Similarity=0.471 Sum_probs=171.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++ |+++++||....
T Consensus 245 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~~- 317 (436)
T cd07135 245 GQICVAPD--YVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMDE- 317 (436)
T ss_pred CceecCCC--EEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcCC-
Confidence 89999966 9999999999999999999999999999 8999999999999999999999887 789999997643
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 318 ~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~ 397 (436)
T cd07135 318 ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDT 397 (436)
T ss_pred CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCc
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999987
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus 398 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 398 LIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 64 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=324.00 Aligned_cols=185 Identities=22% Similarity=0.332 Sum_probs=167.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|+.+ .+|+++++||...
T Consensus 293 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~ 369 (521)
T PRK11903 293 GQKCTAIR--RIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFAL 369 (521)
T ss_pred CCCccCCe--EEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCC
Confidence 89999965 999999999999999999999999999999999999999999999999999854 5799999999642
Q ss_pred ----CCCCceEecEEEecCCC--CCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhc--
Q 038769 79 ----GQKGYYIEPTIFTNVKE--DMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSI-- 142 (197)
Q Consensus 79 ----~~~g~~~~Ptv~~~~~~--~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l-- 142 (197)
...|+|++|||+.++++ ++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++
T Consensus 370 ~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~ 449 (521)
T PRK11903 370 VDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELAD 449 (521)
T ss_pred CCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHH
Confidence 12589999999986554 46889999999999999999 899999999999999999999999999
Q ss_pred ceeEEEECCCCC---------CCCCCCcCCCCCCCCCCcc-hHHHHHhcccccEEE
Q 038769 143 RAGIIWANCYLA---------FDNDCPYGGYKMSGFGRDC-GLDSLHKYLHVKSVV 188 (197)
Q Consensus 143 ~~G~v~iN~~~~---------~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~ 188 (197)
++|+|+||+... ..+.+||||+|.||+|+++ |.+++++|++.|+|.
T Consensus 450 ~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 450 SHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred hCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceee
Confidence 899999997532 3468899999999999985 489999999988764
|
|
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-45 Score=320.53 Aligned_cols=188 Identities=26% Similarity=0.386 Sum_probs=173.2
Q ss_pred CceeeecCCCEEEEeCccH-HHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~-d~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 78 (197)
||.|++++ |||||++++ |+|+++|+++++++++|+| .++++++|||+++++++++.+++++++++|+++++||...
T Consensus 272 GQ~C~a~~--rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 349 (484)
T TIGR03240 272 GQRCTCAR--RLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL 349 (484)
T ss_pred CCCCcCCc--EEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 89999966 999999985 9999999999999999997 5788899999999999999999999999999999988654
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
+..++|++|||+ +++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 350 ~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN 428 (484)
T TIGR03240 350 DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWN 428 (484)
T ss_pred CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEE
Confidence 446889999999 689999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+... ..+.+||||+|.||+|+++|.++++ |++.|+++++..
T Consensus 429 ~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~~ 470 (484)
T TIGR03240 429 KPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEAD 470 (484)
T ss_pred CCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEecc
Confidence 8765 4477999999999999999966655 999999999863
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-45 Score=317.79 Aligned_cols=182 Identities=32% Similarity=0.534 Sum_probs=171.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |+|||++++|+|+++|+++++++++| ++++||++++.+++++.++|++++++|+++++||....
T Consensus 241 GQ~C~a~~--~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 313 (432)
T cd07105 241 GQICMSTE--RIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADES 313 (432)
T ss_pred CCCCcCCc--eEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 99999999999999999999999988 57899999999999999999999999999999987642
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|+.|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 314 ~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~ 393 (432)
T cd07105 314 PSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHING 393 (432)
T ss_pred CCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECC
Confidence 358999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 152 YLAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 152 ~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
+... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 394 ~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 394 MTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 8764 5789999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=321.48 Aligned_cols=187 Identities=26% Similarity=0.446 Sum_probs=173.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++++. +++++||.....
T Consensus 310 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~~~~~ 386 (518)
T cd07125 310 GQRCSALR--LLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDG 386 (518)
T ss_pred CCCCCCCe--EEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999875 689999875322
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|++|||+.++ +|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 387 ~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN 464 (518)
T cd07125 387 NGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYIN 464 (518)
T ss_pred CCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEEC
Confidence 6999999999887 89999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCcCCCCCCCCCC-cchHHHHHhcccccEEEEeCC
Q 038769 151 CYLA--FDNDCPYGGYKMSGFGR-DCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 151 ~~~~--~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+... ..+.+||||+|.||+|+ ++|.+++++|++.|+|+++++
T Consensus 465 ~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 465 RNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred CCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEcc
Confidence 9865 34679999999999995 678999999999999998875
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-45 Score=317.34 Aligned_cols=183 Identities=26% Similarity=0.437 Sum_probs=170.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|++++++++.|+| ++++++||++++++++++.+++++ +++++||..+.
T Consensus 237 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~- 307 (443)
T cd07132 237 GQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDE- 307 (443)
T ss_pred CCceeCCc--EEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCC-
Confidence 89999966 9999999999999999999999998888 688999999999999999998864 48999987643
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||++
T Consensus 308 ~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~ 387 (443)
T cd07132 308 KERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDT 387 (443)
T ss_pred CCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 388 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 388 IMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred ccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 64 34789999999999999999999999999999987754
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=311.47 Aligned_cols=181 Identities=24% Similarity=0.376 Sum_probs=165.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce---
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT--- 77 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--- 77 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|++++.++..
T Consensus 303 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~ 380 (500)
T TIGR01238 303 GQRCSALR--VLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380 (500)
T ss_pred CCCCCCCc--eeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999988744321
Q ss_pred eCCCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 78 VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 78 ~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
....|+|++|||+.+ +++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|
T Consensus 381 ~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v 458 (500)
T TIGR01238 381 ACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNC 458 (500)
T ss_pred CCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceE
Confidence 123699999999973 688899999999999999995 99999999999999999999999999999999
Q ss_pred EECCCCCC--CCCCCcCCCCCCCCC-CcchHHHHHhccccc
Q 038769 148 WANCYLAF--DNDCPYGGYKMSGFG-RDCGLDSLHKYLHVK 185 (197)
Q Consensus 148 ~iN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k 185 (197)
+||+.... .+.+||||+|.||+| +++|.+++++|++.|
T Consensus 459 ~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 459 YVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred EECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 99997653 356899999999999 899999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=304.23 Aligned_cols=179 Identities=30% Similarity=0.508 Sum_probs=165.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++ ++++||....
T Consensus 237 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~- 307 (426)
T cd07087 237 GQTCIAPD--YVLVHESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDK- 307 (426)
T ss_pred CCccccCC--EEEEcHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCC-
Confidence 89999966 99999999999999999999999766664 688999999999999999999765 7899987643
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 308 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~ 387 (426)
T cd07087 308 EERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDV 387 (426)
T ss_pred CCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCc
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
+. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 388 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 388 LLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred ccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 64 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=301.30 Aligned_cols=186 Identities=46% Similarity=0.834 Sum_probs=177.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ +||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||.....
T Consensus 236 Gq~C~a~~--~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~ 313 (432)
T cd07078 236 GQVCTAAS--RLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEG 313 (432)
T ss_pred CCCccCCc--eEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 89999977 9999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred -CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 81 -KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 81 -~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.|.|++|||+.++++++.+++||+||||++|++|+ +|+.++||+++|||+|.+.+.++++++++|+|+||+
T Consensus 314 ~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~ 393 (432)
T cd07078 314 GKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWIND 393 (432)
T ss_pred CCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECC
Confidence 48999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 152 YLAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 152 ~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
++.. .+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 394 ~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 394 YSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 9876 789999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=326.33 Aligned_cols=187 Identities=26% Similarity=0.411 Sum_probs=172.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|+++ +|+|||++++|+|+++|+++++++++|+|.++++++||+|++.+++++.++|+++++ |+++++||..++
T Consensus 827 GQ~CsA~--~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~ 903 (1038)
T PRK11904 827 GQRCSAL--RVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAG 903 (1038)
T ss_pred CCccccC--cEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCC
Confidence 8999995 599999999999999999999999999999999999999999999999999999876 889999997643
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|+.|||+. ..++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 904 ~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vy 981 (1038)
T PRK11904 904 TENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVY 981 (1038)
T ss_pred CCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEE
Confidence 259999999996 3567889999999999999996 999999999999999999999999999999999
Q ss_pred ECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCC
Q 038769 149 ANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 149 iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
||+..+ ....+||||+|.||+| +.+|++++.+|++.|+|++++.
T Consensus 982 IN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~~ 1028 (1038)
T PRK11904 982 VNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNTT 1028 (1038)
T ss_pred EeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEccc
Confidence 999866 3467899999999999 7889999999999999988753
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=319.23 Aligned_cols=187 Identities=26% Similarity=0.408 Sum_probs=171.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.+.++++||+|++.+++++.++|++++++|+.++.++....
T Consensus 819 GQ~CsA~~--rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~ 896 (1208)
T PRK11905 819 GQRCSALR--VLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAET 896 (1208)
T ss_pred CCccccCc--EEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCC
Confidence 89999955 999999999999999999999999999999999999999999999999999999999988887764321
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|+.|||+. + +++.+++||+||||++|++|+ +|+++|||+++|||+|.+.+.++++++++|+|+|
T Consensus 897 ~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyI 974 (1208)
T PRK11905 897 EKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYV 974 (1208)
T ss_pred CCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEE
Confidence 369999999997 3 568889999999999999995 9999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeC
Q 038769 150 NCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 150 N~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 191 (197)
|+..+ ....+||||+|.||+| +.+|++++.+|++.|++++..
T Consensus 975 N~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905 975 NRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred CCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence 99866 3367899999999999 589999999999999998653
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=282.22 Aligned_cols=188 Identities=30% Similarity=0.591 Sum_probs=179.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||-|+. .+|++||+++||.|+..|-++++.++.|.|...+.+||.|+++.++|.++++|++|+++||+++.||.+..
T Consensus 331 GQNCiG--iER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~H 408 (583)
T KOG2454|consen 331 GQNCIG--IERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGH 408 (583)
T ss_pred CCcccc--eeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCC
Confidence 899999 77999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|.|+.||++.+++++|.+++||.||||++++.++ +|+++|||.++||+.|..++..+++.+++|.|.
T Consensus 409 pkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vA 488 (583)
T KOG2454|consen 409 PKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVA 488 (583)
T ss_pred CCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhcccee
Confidence 369999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred ECCCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 149 ANCYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 149 iN~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
||+... ....+||||.|.||+||+.|.+|++..+..|+|..+
T Consensus 489 iNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 489 INDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 999976 347899999999999999999999999999999665
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=313.04 Aligned_cols=182 Identities=25% Similarity=0.398 Sum_probs=167.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++ .+|+|||++|+|+|+++|+++++++++|+|.+.++++||+|++.+++++.++|++++++|++++.++....
T Consensus 914 GQrCsA--~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~ 991 (1318)
T PRK11809 914 GQRCSA--LRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSE 991 (1318)
T ss_pred CCcccc--CcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCC
Confidence 899999 55999999999999999999999999999999999999999999999999999999999999998775422
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
..|+|++|||+.. +++.++++|+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|
T Consensus 992 ~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnv 1069 (1318)
T PRK11809 992 DWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNL 1069 (1318)
T ss_pred CCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEE
Confidence 3599999999974 567889999999999999995 99999999999999999999999999999999
Q ss_pred EECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccE
Q 038769 148 WANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKS 186 (197)
Q Consensus 148 ~iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~ 186 (197)
+||+... ....+||||+|.||+| +.+|++++.+|++.+.
T Consensus 1070 yINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1070 YVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred EECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9998765 3356899999999999 5899999999999874
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=274.74 Aligned_cols=183 Identities=25% Similarity=0.401 Sum_probs=170.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|.||| .|+++++++++|+++++..++++ +|+..+++.+++.+||+.|++|+.+++++. .+++.||+.+.
T Consensus 241 GQtCvapD--YiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~- 312 (477)
T KOG2456|consen 241 GQTCVAPD--YILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE- 312 (477)
T ss_pred CCeeccCC--eEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-
Confidence 89999999 99999999999999999999999 788778999999999999999999988653 48999999764
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.-.|++|||+.|++++.++|+||+|||||+|+.++ +|..+.+|++|+||+|.....++..++.+|.|.+|+.
T Consensus 313 ~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~ 392 (477)
T KOG2456|consen 313 SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDV 392 (477)
T ss_pred hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecce
Confidence 56799999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.. ....+||||+|.||+|++||+++++.|++.|++..+.
T Consensus 393 i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 393 IMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred EEEEEeeccCcCCcCccccccccccccccccccchhhhhcc
Confidence 65 4589999999999999999999999999999987553
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=273.46 Aligned_cols=189 Identities=40% Similarity=0.788 Sum_probs=181.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
|.-|++.+ |+||.++|.|+|+.++++.++++++|+|+|-+++-||--.-+|+.++.+|++.+++.||++.+||+..+.
T Consensus 683 genciaag--r~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r 760 (881)
T KOG2452|consen 683 GENCIAAG--RLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPR 760 (881)
T ss_pred Ccchhhhc--ceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCC
Confidence 56799955 9999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|.|++|||+.++..+|-+..||.||||.+|.+|+ +|++++||+++|||+|...+.++++.|++|+|++|
T Consensus 761 ~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvn 840 (881)
T KOG2452|consen 761 PGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVN 840 (881)
T ss_pred CCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEe
Confidence 99999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.+.-.+...||||+|+||+|+..|..++.+|.+.|+|++.+
T Consensus 841 ty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 841 TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred eccccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence 99877788899999999999999999999999999999864
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=279.95 Aligned_cols=169 Identities=22% Similarity=0.308 Sum_probs=148.9
Q ss_pred CceeeecCCCEEEEeCcc-HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~ 78 (197)
||.|++++ |+|||+++ +|+|+++|+++++++++|+ +++||++++. .+++.++|+++++ +|+++++||...
T Consensus 279 GQ~C~a~~--rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~ 350 (489)
T cd07126 279 GQKCSAQS--ILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPL 350 (489)
T ss_pred CCcCCCCc--eEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCccc
Confidence 89999955 99999995 6999999999999999874 4799999998 9999999999998 999999999764
Q ss_pred CC----CC-ceEecEEEec------CCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHH
Q 038769 79 GQ----KG-YYIEPTIFTN------VKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANT 137 (197)
Q Consensus 79 ~~----~g-~~~~Ptv~~~------~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~ 137 (197)
+. .+ .|++|||+.. ++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.+
T Consensus 351 ~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~ 430 (489)
T cd07126 351 TNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQE 430 (489)
T ss_pred ccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHH
Confidence 32 23 3899999842 56799999999999999999996 8999999999999999999999
Q ss_pred HHhhcceeE--EEECCCCCCC-CC---CCcCCCCCCCCCCcchHHH
Q 038769 138 VSRSIRAGI--IWANCYLAFD-ND---CPYGGYKMSGFGRDCGLDS 177 (197)
Q Consensus 138 ~~~~l~~G~--v~iN~~~~~~-~~---~pfGG~~~SG~G~~~g~~~ 177 (197)
+++++++|+ |+||+..+.. .+ .||||+|.||+|+++...-
T Consensus 431 ~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~~~ 476 (489)
T cd07126 431 VLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRL 476 (489)
T ss_pred HHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHHHh
Confidence 999999999 6699887643 33 9999999999999876543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=278.43 Aligned_cols=172 Identities=22% Similarity=0.271 Sum_probs=154.4
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE-GATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~ 78 (197)
||.|++++ |||||++ ++|+|+++|+++++++++| |++++.+.+++.+.|+++.++ |+++++||...
T Consensus 256 GQ~C~a~~--rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~ 323 (454)
T cd07129 256 GQFCTNPG--LVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA 323 (454)
T ss_pred CCeecCCc--eEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC
Confidence 89999955 9999999 9999999999999999754 677777788888888999998 99999999754
Q ss_pred CCCCceEecEEEecCC---CCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCC--hHHHHHHHhhc--c
Q 038769 79 GQKGYYIEPTIFTNVK---EDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITND--LNTANTVSRSI--R 143 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~---~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d--~~~~~~~~~~l--~ 143 (197)
.+|+|++|||+.... ++|.+++||+||||++|++|+ +|+++|||++||||+| .+++.+++++| +
T Consensus 324 -~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~ 402 (454)
T cd07129 324 -EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERK 402 (454)
T ss_pred -CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhh
Confidence 368999999998555 689999999999999999998 9999999999999999 79999999999 6
Q ss_pred eeEEEECCCCCC---CCCCCcCC-CCCCCCCCc--chHHHHHhccccc
Q 038769 144 AGIIWANCYLAF---DNDCPYGG-YKMSGFGRD--CGLDSLHKYLHVK 185 (197)
Q Consensus 144 ~G~v~iN~~~~~---~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~k 185 (197)
+|+|+||+++.. .+.+|||| +|.||+|++ +|.+++++|+++-
T Consensus 403 ~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 403 AGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred CcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 999999987652 25899999 999999999 7999999999863
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=277.45 Aligned_cols=176 Identities=19% Similarity=0.261 Sum_probs=154.9
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE-GATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~ 78 (197)
||.|++++ |+|||++ ++|+|+++|+++++++++| ++.+||++++. +.++|+++.++ |+++++||...
T Consensus 239 GQ~C~a~~--rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~ 307 (442)
T cd07084 239 GQKCTAQS--MLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKEL 307 (442)
T ss_pred CCeecCCc--EEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCccc
Confidence 89999966 9999999 9999999999999999998 67899997764 45556677777 58999998752
Q ss_pred C------CCCceEecEEEecCCCCC---cccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHH
Q 038769 79 G------QKGYYIEPTIFTNVKEDM---LIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVS 139 (197)
Q Consensus 79 ~------~~g~~~~Ptv~~~~~~~~---~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~ 139 (197)
. ..|+|++|||+.+++++| .+++||+||||++|++|+ +|+++|||+++|||+|.+++.+++
T Consensus 308 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 387 (442)
T cd07084 308 KNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI 387 (442)
T ss_pred ccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHH
Confidence 1 148999999999999997 999999999999999998 899999999999999999999999
Q ss_pred hhc-ceeEEEECCC-CC-CCCCCCcCC-CCCCCCCCcc-hHHHHHhcccccEE
Q 038769 140 RSI-RAGIIWANCY-LA-FDNDCPYGG-YKMSGFGRDC-GLDSLHKYLHVKSV 187 (197)
Q Consensus 140 ~~l-~~G~v~iN~~-~~-~~~~~pfGG-~~~SG~G~~~-g~~~~~~f~~~k~v 187 (197)
+++ ++|+||||+. +. ..+..|||| +|.||+|++. |.+++++|++...+
T Consensus 388 ~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 388 GNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999 9999999977 33 456678877 8899999986 99999999987644
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=248.41 Aligned_cols=192 Identities=26% Similarity=0.465 Sum_probs=179.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|+. .+|++||+++||+++++|++...++++|+|+|.++.+|||.++++..++...|++++++|.++++||+..+.
T Consensus 296 gqrctt--~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er 373 (507)
T KOG2453|consen 296 GQRCTT--TRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLER 373 (507)
T ss_pred ccchhh--hhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeecc
Confidence 899999 889999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHH--hhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVS--RSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN 150 (197)
+|+|+.|||+. ..+|.++..+|.|.|||+|.+|+ -|..+.||+.+|||+|.....++. ...+||.|.+|
T Consensus 374 ~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvn 452 (507)
T KOG2453|consen 374 DGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVN 452 (507)
T ss_pred CCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEec
Confidence 99999999997 89999999999999999999999 356899999999999999998887 56779999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSP 195 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~ 195 (197)
-++. ....-.|||-|..|-||+.|.++.++|++..+.+++++++.
T Consensus 453 iptsgaeiggafggek~tgggresgsdswkqymrrstctinyskel 498 (507)
T KOG2453|consen 453 IPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINYSKEL 498 (507)
T ss_pred CCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeeccccC
Confidence 8865 34566799999999999999999999999999999998763
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=249.26 Aligned_cols=188 Identities=28% Similarity=0.499 Sum_probs=175.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVNQGPQINKKQFDRILSYIESGKKE-GATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~ 78 (197)
||.|.+ -||+||++++.+++.++|.+.-+++++||| .|-++.+||+|+...++|+.++|+.|+.. ..++++||+.+
T Consensus 342 GQkcsA--~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~D 419 (561)
T KOG2455|consen 342 GQKCSA--CSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCD 419 (561)
T ss_pred ccccch--hhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCccc
Confidence 899999 779999999999999999999999999998 78889999999999999999999999873 47899999999
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE-----------ecCCCCcceeEEeeCChHHHHHHHhhcc--ee
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-----------ANNRRYGLAAGIITNDLNTANTVSRSIR--AG 145 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~-----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~--~G 145 (197)
+..|+|+.|||+..-+|.+++|.||+|||||+|+.|. .|.++|+|+++||++|.+...+..++|+ +|
T Consensus 420 dS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAg 499 (561)
T KOG2455|consen 420 DSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAG 499 (561)
T ss_pred CCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhc
Confidence 8899999999999999999999999999999999998 7899999999999999999999998888 99
Q ss_pred EEEECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEe
Q 038769 146 IIWANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 146 ~v~iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 190 (197)
+.+||+..+ ....+||||-+.||.. +.+|++-+.+|+.+++|...
T Consensus 500 NfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt 547 (561)
T KOG2455|consen 500 NFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKET 547 (561)
T ss_pred ceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhc
Confidence 999999877 4589999999999986 78899999999999987543
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=252.86 Aligned_cols=165 Identities=15% Similarity=0.214 Sum_probs=140.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKE--GATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~~~~gg~~~ 78 (197)
||.|++++ |+|||+++||+|+++|+++ .. +++++++++++.++|+++.+. |++++.||...
T Consensus 237 GQ~C~a~~--rv~V~~~i~d~f~~~L~~~-~~--------------~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~ 299 (429)
T cd07121 237 NLPCIAEK--EVIAVDSVADYLIAAMQRN-GA--------------YVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDAS 299 (429)
T ss_pred CCCCCccc--eEEEeHHHHHHHHHHHHHC-CC--------------EEcCHHHHHHHHHhhcccCCCccccccccCcCHH
Confidence 89999965 9999999999999999887 11 379999999999999999864 68999988531
Q ss_pred ---CCCCceEe---cEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcc--eeEEeeCChHHHHHHHhhc
Q 038769 79 ---GQKGYYIE---PTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL--AAGIITNDLNTANTVSRSI 142 (197)
Q Consensus 79 ---~~~g~~~~---Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL--~~~v~t~d~~~~~~~~~~l 142 (197)
+..|.|+. |||+.+++++|.+++||+||||++|++|+ +|+++||| +++|||+|.+++.++++++
T Consensus 300 ~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l 379 (429)
T cd07121 300 KILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379 (429)
T ss_pred HHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhC
Confidence 12477877 49999999999999999999999999998 89999999 9999999999999999999
Q ss_pred ceeEEEECCCCCCCCCCCcCCCCCCCC--CCcchHHHHHhcccccEEE
Q 038769 143 RAGIIWANCYLAFDNDCPYGGYKMSGF--GRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 143 ~~G~v~iN~~~~~~~~~pfGG~~~SG~--G~~~g~~~~~~f~~~k~v~ 188 (197)
++|+||||++.. +.+||||+|.|++ |..-| +| .+.+|+++
T Consensus 380 ~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~---~~~~~~~~ 421 (429)
T cd07121 380 QTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EG---LTSARTFT 421 (429)
T ss_pred CceEEEEcCCCc--CccccCCCccceEEecCCcC-cC---ccChhhhh
Confidence 999999998754 6799999999998 43333 33 35555544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=247.65 Aligned_cols=178 Identities=19% Similarity=0.245 Sum_probs=148.2
Q ss_pred CceeeecCCCEEEEeCc---------cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 038769 1 LRVCFTHQFPNIYVQEG---------IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~---------v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~ 71 (197)
||+|++++ |||||++ +||+|+++|+++++++ +|||.+..+++|||+++.+++++.+ +++.|+ +
T Consensus 336 GQ~C~a~~--ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-v 407 (549)
T cd07127 336 GQMCTTPQ--NIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-V 407 (549)
T ss_pred CCCCCCCC--EEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-E
Confidence 89999966 9999999 8999999999999999 9999999999999999999999854 556664 7
Q ss_pred EeCCceeC---CCC-ceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCC--C-cceeEEeeCChHHHH
Q 038769 72 LTGGKTVG---QKG-YYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR--Y-GLAAGIITNDLNTAN 136 (197)
Q Consensus 72 ~~gg~~~~---~~g-~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~--~-gL~~~v~t~d~~~~~ 136 (197)
++||.... ..| ++++|||+...+++|.+++||+||||++|++|+ +|++. + ||+++|||+|.+.++
T Consensus 408 l~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~ 487 (549)
T cd07127 408 LLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVE 487 (549)
T ss_pred EEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHH
Confidence 78876431 134 467999999888999999999999999999999 88873 4 699999999999999
Q ss_pred HHHhhcc-e-eEEEECCCCCCCCCC--CcCCCCCCCCC-CcchHHHHHhcccccE
Q 038769 137 TVSRSIR-A-GIIWANCYLAFDNDC--PYGGYKMSGFG-RDCGLDSLHKYLHVKS 186 (197)
Q Consensus 137 ~~~~~l~-~-G~v~iN~~~~~~~~~--pfGG~~~SG~G-~~~g~~~~~~f~~~k~ 186 (197)
++.+++. + |+++||.......++ ||||.+.||.. ..+.....-.|...|-
T Consensus 488 ~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~ 542 (549)
T cd07127 488 RVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRF 542 (549)
T ss_pred HHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcce
Confidence 9999955 4 599999665544444 49999999986 3445566666665553
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=242.56 Aligned_cols=156 Identities=22% Similarity=0.353 Sum_probs=131.2
Q ss_pred CceeeecCCCEEEEeCc---------cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 038769 1 LRVCFTHQFPNIYVQEG---------IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~---------v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~ 71 (197)
||+|++++ |||||++ +||+|+++|+++++++ +|||.++.+++|||+++.+++++ ++++++| ++
T Consensus 336 GQ~Cta~~--ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v 407 (551)
T TIGR02288 336 GQMCTTTQ--AILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EV 407 (551)
T ss_pred CCCCCCCC--EEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CE
Confidence 89999966 9999999 7999999999999999 99999999999999999999995 5677788 66
Q ss_pred EeCCceeC---CCC-ceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCC--CCc-ceeEEeeCChHHHH
Q 038769 72 LTGGKTVG---QKG-YYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR--RYG-LAAGIITNDLNTAN 136 (197)
Q Consensus 72 ~~gg~~~~---~~g-~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~--~~g-L~~~v~t~d~~~~~ 136 (197)
+++|.... ..| +|++|||+....++|.+++||+||||++|++|+ +|++ +|| |+++|||+|.+++.
T Consensus 408 ~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~ 487 (551)
T TIGR02288 408 LLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVD 487 (551)
T ss_pred EEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHH
Confidence 66665321 134 689999995444599999999999999999999 8988 566 99999999999999
Q ss_pred HHHhhc----------ceeEEEECCCCCCCCCCCcCCCCCCCCC
Q 038769 137 TVSRSI----------RAGIIWANCYLAFDNDCPYGGYKMSGFG 170 (197)
Q Consensus 137 ~~~~~l----------~~G~v~iN~~~~~~~~~pfGG~~~SG~G 170 (197)
++.+++ ++|.|+||++ .+|++.+.||..
T Consensus 488 ~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n 525 (551)
T TIGR02288 488 AVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGN 525 (551)
T ss_pred HHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCC
Confidence 999999 6666666654 456776777654
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=245.89 Aligned_cols=169 Identities=12% Similarity=0.195 Sum_probs=140.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce---
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT--- 77 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--- 77 (197)
||.|++++ |||||+++||+|+++|+++. .|++++.+++++.++++++.+++++++.|+..
T Consensus 269 GQ~C~A~~--rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i 331 (465)
T PRK15398 269 NLPCIAEK--EVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKI 331 (465)
T ss_pred CCcCCCCc--eEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHH
Confidence 89999966 99999999999999998861 26999999999999998655456677777642
Q ss_pred eCCCCceE---ecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcc--eeEEeeCChHHHHHHHhhcce
Q 038769 78 VGQKGYYI---EPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL--AAGIITNDLNTANTVSRSIRA 144 (197)
Q Consensus 78 ~~~~g~~~---~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL--~~~v~t~d~~~~~~~~~~l~~ 144 (197)
....|+++ +|||+.+++++|.+++||+||||++|++|+ +|+++||| ++||||+|.+++.++++++++
T Consensus 332 ~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~ 411 (465)
T PRK15398 332 LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQT 411 (465)
T ss_pred HHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCc
Confidence 11236665 489999999999999999999999999998 99999999 999999999999999999999
Q ss_pred eEEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 145 GIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 145 G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
|+|+||.+.. +.+||||+|.|.+- .+|+.| ...|..|+++.+
T Consensus 412 G~V~iN~~~~--~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 412 SIFVKNGPSY--AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred eEEEECCCCc--cccCcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence 9999998753 67999999999862 225555 555555555443
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-32 Score=238.97 Aligned_cols=144 Identities=19% Similarity=0.215 Sum_probs=127.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
| .|++++ |||||+++||+|+++|+++++++ |++++.|+..
T Consensus 249 G-~C~a~~--rv~V~~si~d~f~~~l~~~~~~~----------------------------------ga~~~~g~~~--- 288 (406)
T cd07079 249 S-VCNALE--TLLVHRDIAEEFLPKLAEALREA----------------------------------GVELRGDEET--- 288 (406)
T ss_pred c-ccccce--eEEEeHHHHHHHHHHHHHHHHHC----------------------------------CCEEecCHHH---
Confidence 6 899966 99999999999999999987762 4565433221
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
..|++|| ++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 289 -~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~ 363 (406)
T cd07079 289 -LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNAS 363 (406)
T ss_pred -HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 1377888 78899999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCC----CCcchHHHHHhcccccEEEE
Q 038769 153 LAFDNDCPYGGYKMSGF----GRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~----G~~~g~~~~~~f~~~k~v~~ 189 (197)
....+.+||||.|.||. |+++|.+++++|++.|+|++
T Consensus 364 ~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 364 TRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred CcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 76666789999999998 89999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-32 Score=237.03 Aligned_cols=147 Identities=19% Similarity=0.227 Sum_probs=127.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
| .|++++ |+|||+++||+|+++|++++++++++. + ++...
T Consensus 255 G-~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~~~----------------------------------~-~~~~~-- 294 (417)
T PRK00197 255 S-VCNALE--TLLVHEAIAEEFLPKLAEALAEAGVEL----------------------------------R-GDEAA-- 294 (417)
T ss_pred c-ccccce--EEEEEHHHhHHHHHHHHHHHHHCCCeE----------------------------------e-cCHHH--
Confidence 6 799955 999999999999999999999986421 1 11100
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.+ |+ |||+ +++|.+++||+||||++|++|+ +|+++|||++||||+|.++++++++++++|+|+||++
T Consensus 295 ~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~ 369 (417)
T PRK00197 295 LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNAS 369 (417)
T ss_pred HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 12 23 9998 4679999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCC----CcchHHHHHhcccccEEEEeCC
Q 038769 153 LAFDNDCPYGGYKMSGFG----RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
....+..||||.|.||+| +++|.+++++|++.|++++..+
T Consensus 370 ~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 370 TRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred CccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCC
Confidence 766667899999999999 9999999999999999987654
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=244.51 Aligned_cols=145 Identities=14% Similarity=0.241 Sum_probs=128.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++ .+|+|||+++||+ | .+.++|++|+++||++ +||....
T Consensus 541 GQ~C~a--~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~- 583 (718)
T PLN02418 541 PAACNA--METLLVHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRAS- 583 (718)
T ss_pred CCcccc--CcEEEEecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCcccc-
Confidence 799999 5599999999997 2 3588999999999999 6875432
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
| ++. + ++|.+++||+|||+++|.+|+ +|+++|||+++|||+|.+++.++++++++|.||||++
T Consensus 584 -g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~ 654 (718)
T PLN02418 584 -K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNAS 654 (718)
T ss_pred -C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCC
Confidence 3 243 3 789999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCC--CCcc--hHHHHHhcccccEEEEeC
Q 038769 153 LAFDNDCPYGGYKMSGF--GRDC--GLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~f~~~k~v~~~~ 191 (197)
+...+..||||+|.||+ |+++ |++|+++|++.|+|++--
T Consensus 655 ~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 655 TRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred CCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 76567789999999999 9875 999999999999997643
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=232.39 Aligned_cols=172 Identities=12% Similarity=0.220 Sum_probs=140.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-e-e
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGK-T-V 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~-~ 78 (197)
||.|++ .+|+|||+++||+|+++|++++ |||+++.+++++.++|+++.++|++++.|+. . .
T Consensus 235 GQ~C~a--~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~ 297 (439)
T cd07081 235 GVICAS--EQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA 297 (439)
T ss_pred CCCCCC--CCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence 899999 4599999999999999998874 8999999999999999999999997754432 1 1
Q ss_pred CCCCceEecE---EEecCC--CCCcccccceecceeEEEEEE--------ecC----CCCcceeEEeeCC---hHHHHHH
Q 038769 79 GQKGYYIEPT---IFTNVK--EDMLIAKDEIFGPVMVLMKFN--------ANN----RRYGLAAGIITND---LNTANTV 138 (197)
Q Consensus 79 ~~~g~~~~Pt---v~~~~~--~~~~~~~eE~FGPvl~v~~~~--------~n~----~~~gL~~~v~t~d---~~~~~~~ 138 (197)
...|+|+.|| ++.+++ ++|.+++||+||||++|++|+ +|+ ++|||+++|||+| .+++.++
T Consensus 298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~ 377 (439)
T cd07081 298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF 377 (439)
T ss_pred HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence 1258899998 998888 999999999999999999999 665 5899999999999 9999999
Q ss_pred HhhcceeEEEECCCC-C--CCCCCCcCCCCCCCCC--Ccch-----HHHHHhcccccEEEE
Q 038769 139 SRSIRAGIIWANCYL-A--FDNDCPYGGYKMSGFG--RDCG-----LDSLHKYLHVKSVVT 189 (197)
Q Consensus 139 ~~~l~~G~v~iN~~~-~--~~~~~pfGG~~~SG~G--~~~g-----~~~~~~f~~~k~v~~ 189 (197)
++++++|+|+||++. + ..-..-|||++.+-.| -.+| .-+.++|++.|+|..
T Consensus 378 a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 378 ANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999876 3 2234457777665333 2222 134678888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=231.74 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=148.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHH-------HhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEE
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~-------~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~ 72 (197)
||.|++.+ |+|||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.+++++++++|++++
T Consensus 244 Gq~C~a~~--rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll 321 (488)
T TIGR02518 244 GTICASEQ--SIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVL 321 (488)
T ss_pred CCCCCCCC--EEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEE
Confidence 89999955 9999999999999999998 899999996 6788999999999999999999999999999999
Q ss_pred eCCceeCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecC----CCCcceeEEeeCChHHHHHHHh
Q 038769 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN----RRYGLAAGIITNDLNTANTVSR 140 (197)
Q Consensus 73 ~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~----~~~gL~~~v~t~d~~~~~~~~~ 140 (197)
+||.. .+.+++++ ++|+||||++|++|+ +|+ .+|||+++|||+|.+++.+|++
T Consensus 322 ~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~ 386 (488)
T TIGR02518 322 IGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFAL 386 (488)
T ss_pred EeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHH
Confidence 98852 25667775 799999999999999 665 6899999999999999999999
Q ss_pred hcceeEEEECCCCC------CC-----CCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 141 SIRAGIIWANCYLA------FD-----NDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 141 ~l~~G~v~iN~~~~------~~-----~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
++++|+|+||++.. +. ..+-||+++.++.. .+-++++++..|.|....
T Consensus 387 ~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 387 KKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred hCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 99999999997641 11 23337788777766 278889999999886654
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=247.26 Aligned_cols=178 Identities=20% Similarity=0.292 Sum_probs=153.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE-EeCCcee-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV-LTGGKTV- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~-~~gg~~~- 78 (197)
||.|+|++ |||||++++|+|+++|+++. +|++++.+++++.++|+++.+.+++. ++|+...
T Consensus 248 GQ~C~a~~--~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~ 310 (862)
T PRK13805 248 GMICASEQ--AVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYK 310 (862)
T ss_pred CCccCCCc--eEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHH
Confidence 89999977 99999999999999998872 58999999999999999887665532 4566321
Q ss_pred --CCCCceEecEE------EecCCCCCcccccceecceeEEEEEE--------ecC----CCCcceeEEeeCChHHHHHH
Q 038769 79 --GQKGYYIEPTI------FTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN----RRYGLAAGIITNDLNTANTV 138 (197)
Q Consensus 79 --~~~g~~~~Ptv------~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~----~~~gL~~~v~t~d~~~~~~~ 138 (197)
...|+++.||+ +.+++++|.+++ |+||||++|++|+ +|+ .+|||+++|||+|.+++.++
T Consensus 311 ~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~ 389 (862)
T PRK13805 311 IAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEF 389 (862)
T ss_pred HHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHH
Confidence 12488899997 678899999887 7999999999998 665 58999999999999999999
Q ss_pred HhhcceeEEEECCCC----------CCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCCCCC
Q 038769 139 SRSIRAGIIWANCYL----------AFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPWL 197 (197)
Q Consensus 139 ~~~l~~G~v~iN~~~----------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~ 197 (197)
++++++|+|+||.+. ...+.+|||| |.||.|+++|+.|+++|++.|+|..+..+-.||
T Consensus 390 ~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 390 GLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred HhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 999999999999885 3568999998 999999999999999999999998777665554
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=227.33 Aligned_cols=184 Identities=24% Similarity=0.383 Sum_probs=162.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|.+ -+.+++++++.|..++.||-++..+++|+|....+|+||+|+..+.+.++++|+..+.+|-.+..-....+
T Consensus 379 GQRCSA--LRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~ 456 (769)
T COG4230 379 GQRCSA--LRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSL 456 (769)
T ss_pred cchhhh--hhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCcc
Confidence 899999 77999999999999999999999999999999999999999999999999999998888844433222221
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|.|+.||++. +.. ..-++.|+|||||.|++|+ +|.+.||||.+|+|+..+.+..+.+++++|++||
T Consensus 457 q~GtFv~Ptl~E-l~~-~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYV 534 (769)
T COG4230 457 QKGTFVAPTLIE-LEN-LDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYV 534 (769)
T ss_pred CCceeeCceeEE-cCC-HHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEe
Confidence 379999999996 332 3447899999999999998 9999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEE
Q 038769 150 NCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 150 N~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~ 188 (197)
|...+ +..-+||||.+-||+| +.+|+..+.+|...+...
T Consensus 535 NRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~~ 576 (769)
T COG4230 535 NRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPWS 576 (769)
T ss_pred eccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCcC
Confidence 99876 5578999999999999 788999999999777643
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=223.83 Aligned_cols=141 Identities=18% Similarity=0.146 Sum_probs=126.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||+++||+|+++|++++.. +|++++.|+.
T Consensus 239 GQ~C~a~~--~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~---- 278 (397)
T cd07077 239 QNACASEQ--NLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK---- 278 (397)
T ss_pred CccCCCCe--EEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce----
Confidence 89999977 9999999999999999998865 4667776663
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE------------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~------------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
+.|+.|| ++|.+++||+||||+++++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 279 -~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~ 351 (397)
T cd07077 279 -PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFY 351 (397)
T ss_pred -eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEE
Confidence 4577776 678899999999999999998 589999999999999999999999999999999
Q ss_pred ECCCCCCC--CCCCcCCCC--CCCCCCcch-HHHHHhcccccEEE
Q 038769 149 ANCYLAFD--NDCPYGGYK--MSGFGRDCG-LDSLHKYLHVKSVV 188 (197)
Q Consensus 149 iN~~~~~~--~~~pfGG~~--~SG~G~~~g-~~~~~~f~~~k~v~ 188 (197)
||++.... ...||||++ .||.|+++| .+++++|++.|+++
T Consensus 352 vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 352 PNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99987643 778999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=231.79 Aligned_cols=147 Identities=15% Similarity=0.215 Sum_probs=126.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|+|++ |||||++++|+ | .+.++++++.++|++++ ||...+
T Consensus 533 GQ~C~a~~--rvlV~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~- 575 (715)
T TIGR01092 533 PAACNAME--TLLVHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRFA- 575 (715)
T ss_pred CCccccCc--EEEEehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcchh-
Confidence 89999976 99999999984 1 25677888888999985 775431
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+. + .+++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|.|+||++
T Consensus 576 --~~~~---~--~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~ 648 (715)
T TIGR01092 576 --AYLT---F--NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNAS 648 (715)
T ss_pred --heec---c--CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 2332 1 35689999999999999999999 9999999999999999999999999999999999988
Q ss_pred CCCCCCCCcCCCCCCCCCC----cchHHHHHhcccccEEEEeC
Q 038769 153 LAFDNDCPYGGYKMSGFGR----DCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~v~~~~ 191 (197)
....+.+||||+|.||+|+ ++|.+++++|++.|+|++..
T Consensus 649 ~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 649 TRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred CCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 6556778999999999995 47999999999999997654
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=220.26 Aligned_cols=146 Identities=22% Similarity=0.275 Sum_probs=126.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhcc-------ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEE
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l-------~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~ 72 (197)
||.|++++ |+|||+++||+|+++|+++...+ ++|++ .+.++++||+++..+++++..++..+..+|++++
T Consensus 235 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 235 GTICASEQ--SVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred CCCCCCCC--EEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 89999966 99999999999999999999988 89998 4678889999999999998888877777777777
Q ss_pred eCCceeCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCC----CCcceeEEeeCChHHHHHHHh
Q 038769 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR----RYGLAAGIITNDLNTANTVSR 140 (197)
Q Consensus 73 ~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~----~~gL~~~v~t~d~~~~~~~~~ 140 (197)
+++ +.+++++|.++ +|+||||++|++|+ +|++ +|||++||||+|.+++.++++
T Consensus 313 ~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~ 377 (436)
T cd07122 313 VAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFAL 377 (436)
T ss_pred EEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHh
Confidence 555 45778889987 56799999999999 8886 899999999999999999999
Q ss_pred hcceeEEEECCCCCCCCCCCcCCCCCCCC
Q 038769 141 SIRAGIIWANCYLAFDNDCPYGGYKMSGF 169 (197)
Q Consensus 141 ~l~~G~v~iN~~~~~~~~~pfGG~~~SG~ 169 (197)
++++|+||||+++. |||+|.++.
T Consensus 378 ~l~aG~V~IN~~~~------~~~~g~~~~ 400 (436)
T cd07122 378 RMPVSRILVNTPSS------LGGIGDTYN 400 (436)
T ss_pred hCCceEEEEeCCcc------ccccCccCC
Confidence 99999999998764 455555444
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=208.68 Aligned_cols=126 Identities=44% Similarity=0.755 Sum_probs=119.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ +||||++++|+|+++|+
T Consensus 232 gq~C~s~~--~v~v~~~~~~~f~~~l~----------------------------------------------------- 256 (367)
T cd06534 232 GQICTAAS--RLLVHESIYDEFVEKLV----------------------------------------------------- 256 (367)
T ss_pred CCCCCCCc--EEEEcHHHHHHHHHhhc-----------------------------------------------------
Confidence 89999977 99999999999999997
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
||+.++++++.+++||+|||+++|++|+ +|+.++||+++|||+|.+.+.++++++++|+|+||++
T Consensus 257 -------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 329 (367)
T cd06534 257 -------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDS 329 (367)
T ss_pred -------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 7777888899999999999999999999 8999999999999999999999999999999999999
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
+.. .+.+||||++.||+|+++|.+++++|++.|+|+
T Consensus 330 ~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 330 SIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 876 789999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-25 Score=188.68 Aligned_cols=145 Identities=16% Similarity=0.097 Sum_probs=113.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||+++||+|+++|+++++++++ .+++ .+.+.+++.. | +
T Consensus 242 GQ~C~a~~--rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g------~----- 290 (398)
T TIGR00407 242 PSTCNAIE--TLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G------P----- 290 (398)
T ss_pred CCcccccc--eEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c------C-----
Confidence 89999955 9999999999999999999998743 1222 1334333321 1 1
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
||++ ++ .+.+++||+||||++|++|+ +|+++|||+++|||+|.++++++++++++|.|+||++
T Consensus 291 ------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~ 361 (398)
T TIGR00407 291 ------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNAS 361 (398)
T ss_pred ------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 3554 23 37899999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCCC----CCCCCcchHHHHHhccccc
Q 038769 153 LAFDNDCPYGGYKM----SGFGRDCGLDSLHKYLHVK 185 (197)
Q Consensus 153 ~~~~~~~pfGG~~~----SG~G~~~g~~~~~~f~~~k 185 (197)
....+..|||=-.. ++-....|+.+++.|+..|
T Consensus 362 ~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 362 TRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 87777789972121 1223445889999988765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.5e-15 Score=108.49 Aligned_cols=138 Identities=30% Similarity=0.409 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCceeCCCCceEecEEEecCCCCC
Q 038769 19 YDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTVGQKGYYIEPTIFTNVKEDM 97 (197)
Q Consensus 19 ~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~ 97 (197)
...+.+.|++..+.|++-+...+.+|. .+..+|+.++|+.-.- .|..+.+.|- +.|+|..||++. ++|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 356788899999999999888888887 6778888888875211 1333333332 378999999998 99999
Q ss_pred cccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCCCC-CCCCCCcCCCC
Q 038769 98 LIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLA-FDNDCPYGGYK 165 (197)
Q Consensus 98 ~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~ 165 (197)
.++.|||||||+....-+ +|+++||-...+||.+.+.++++.+..++|.+.+|-+.. ..+...|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 999999999999999877 899999999999999999999999999999999998754 34666676644
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.9e-06 Score=65.40 Aligned_cols=126 Identities=19% Similarity=0.214 Sum_probs=89.5
Q ss_pred CEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCCCCceEecEE
Q 038769 10 PNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTI 89 (197)
Q Consensus 10 ~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv 89 (197)
..|+|||++.|+|+++++.+++.+. +. +.+...+.|-.+.+ ...+++.+.+.... .-..-.|.|
T Consensus 37 atVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~rsl~~i---~~l~~~~I~~~~~~--~~~~aSPil 100 (215)
T PF07368_consen 37 ATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLRSLKKI---KCLNAKTIVADFEN--VPPPASPIL 100 (215)
T ss_pred EEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHHHHHHH---HhcCCeEEEecccC--CCCCCCCEE
Confidence 4699999999999999999997763 22 33444555555544 45678888874332 223346888
Q ss_pred EecCCCCCcccccceecceeEEEEEE-------ecC--CCCcceeEEeeCChHHHHHHHhhcceeEEEECCCCC
Q 038769 90 FTNVKEDMLIAKDEIFGPVMVLMKFN-------ANN--RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLA 154 (197)
Q Consensus 90 ~~~~~~~~~~~~eE~FGPvl~v~~~~-------~n~--~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~ 154 (197)
+.+.+.. .+-+ -=.+|+++-+|+ +.. +--.-+.+||++-.+.+-.++.++.+-.++|||...
T Consensus 101 V~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 101 VCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFDSVSIWNEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred EcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcceEEEeCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 8776543 2222 234688888888 222 223349999999999999999999999999999865
|
The function of this family is unknown. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.3e-06 Score=71.44 Aligned_cols=168 Identities=14% Similarity=0.162 Sum_probs=107.7
Q ss_pred EEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCceeCCCCceEecEE
Q 038769 11 NIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTVGQKGYYIEPTI 89 (197)
Q Consensus 11 rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptv 89 (197)
++||+++--- ++-...+-.-|...|.-=++.=.=|+++...++..-.+.++.. .|.++....+... +
T Consensus 229 Hiyvd~~ADl---d~A~~ii~nAKtqrPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d~~~~~---------~ 296 (417)
T COG0014 229 HIYVDESADL---DKALKIIVNAKTQRPSVCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGDAEALA---------L 296 (417)
T ss_pred EEEecccCCH---HHHHHHHHcccCCCCcccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcCHHHHH---------h
Confidence 6888887421 2222223333444443222222236777666665555544444 4555554332211 1
Q ss_pred Eec--CCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCCCCCCCCC
Q 038769 90 FTN--VKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC 159 (197)
Q Consensus 90 ~~~--~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~ 159 (197)
+.+ ......=|..|...+++.|..+| +|.-..+.|=+|.|+|...+++|...+++-.|++|.++-+....
T Consensus 297 ~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~ 376 (417)
T COG0014 297 LPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGG 376 (417)
T ss_pred ccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCc
Confidence 111 22223337889999999999999 88888889999999999999999999999999999998766554
Q ss_pred CcC--C-CCCCC-CCCcchHHHHHhcccccEEEEe
Q 038769 160 PYG--G-YKMSG-FGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 160 pfG--G-~~~SG-~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
-|| . ++-|- -....|+.|++++|..|.+..-
T Consensus 377 ~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 377 QFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred cccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 454 3 23332 2345599999999999988653
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00027 Score=61.98 Aligned_cols=125 Identities=11% Similarity=0.104 Sum_probs=70.8
Q ss_pred CceeeecCCCEEEEeCcc---HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce
Q 038769 1 LRVCFTHQFPNIYVQEGI---YDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT 77 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v---~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 77 (197)
||.|+||+ +||||+++ +++|.++|.++++++.-..|.. ++ +.....++...-..+...+.+...
T Consensus 257 gQ~C~sp~--~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~---- 323 (422)
T cd07080 257 QQACSSPQ--VVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGV---- 323 (422)
T ss_pred hhhccCCe--EEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 79999988 99999999 9999999999999886433321 11 344444443332222222211111
Q ss_pred eCCCCceEecEEEecCCCCCcccccceecceeEEEEEE------ecCCCCcceeEEeeCChHHHHHHHhhcc-eeE
Q 038769 78 VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------ANNRRYGLAAGIITNDLNTANTVSRSIR-AGI 146 (197)
Q Consensus 78 ~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~------~n~~~~gL~~~v~t~d~~~~~~~~~~l~-~G~ 146 (197)
....+. ||+.+... .+.. -..+=.+.|++++ -.-.++=-|++++..+.+. .++++.+. +|.
T Consensus 324 ~~~~~~----~v~~~~~~--~~~~-~~~~r~v~v~~v~~l~~~l~~~~~~lQTvg~~~~~~~~-~~~~~~l~~~Gv 391 (422)
T cd07080 324 SRDLGW----TVIISDEI--GLEA-SPLNRTVNVKPVASLDDVLRPVTPYLQTVGLAPSPAEL-AELADALAAAGV 391 (422)
T ss_pred CCCCCe----EEEEeCCC--CccC-CCCcCEEEEEEcchHHHHHHhhhhhcceeEeecChhhH-HHHHHHHHHcCc
Confidence 101121 34432222 1111 2333346666666 1112366799999988877 77777776 454
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=93.69 E-value=2.8 Score=36.65 Aligned_cols=31 Identities=26% Similarity=0.437 Sum_probs=24.3
Q ss_pred CceeeecCCCEEEEe---CccHHHHHHHHHHHHhcc
Q 038769 1 LRVCFTHQFPNIYVQ---EGIYDEFEKKLVEKAKAW 33 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~---~~v~d~f~~~l~~~~~~l 33 (197)
.|.|.||+ .|||. +.-.++|.++|.+++++.
T Consensus 228 Q~aCsSp~--~ifv~~g~~~~~~~f~~~L~~~L~~~ 261 (399)
T PF05893_consen 228 QQACSSPQ--VIFVETGDGDSVEEFAERLAEALERA 261 (399)
T ss_pred CcccCCCe--EEEEECCCcccHHHHHHHHHHHHHHH
Confidence 47899988 99999 344678888887777664
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.46 Score=40.30 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=81.5
Q ss_pred HHHHHHHHcCCEEEeCCceeCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeC
Q 038769 59 SYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITN 130 (197)
Q Consensus 59 ~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~ 130 (197)
..+.-.+.+|.++.+|-+... -..|- +++..-++.|.-.-.+++-.++ +|...-+.|-.|.|+
T Consensus 271 ~l~~~l~~~gVtl~agpkl~~-~l~~~--------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe 341 (433)
T KOG4165|consen 271 DLINMLKEEGVTLHAGPKLAA-LLKFS--------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTE 341 (433)
T ss_pred HHHHHHHhcCeEEecChhHHh-hcCcC--------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEec
Confidence 334444567777776554321 12111 3334446667666667777776 777777789999999
Q ss_pred ChHHHHHHHhhcceeEEEECCCCCCCCCCCcCCCCCCC--CCC--cchHHHHHhcccccEEEE
Q 038769 131 DLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSG--FGR--DCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 131 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG--~G~--~~g~~~~~~f~~~k~v~~ 189 (197)
|...++.|.+.+++-.|+.|-++-+....-||=--.-| ++| ..|+.|++-....|.+..
T Consensus 342 ~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lR 404 (433)
T KOG4165|consen 342 NEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLR 404 (433)
T ss_pred CHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEe
Confidence 99999999999999999999988776666665211222 233 347888888888777643
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.066 Score=47.49 Aligned_cols=130 Identities=13% Similarity=0.121 Sum_probs=87.2
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCCCCceEecEEEecC
Q 038769 14 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNV 93 (197)
Q Consensus 14 V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~ 93 (197)
|++.-.+++-++++.+-+..+.++. .-.+..++.+++..+.+++++++..+...+..+ .|-++.++...|+
T Consensus 52 v~~~~~~dVd~aV~aAr~Af~~~~W--------~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d-~GKp~~~a~~~Dl 122 (501)
T KOG2450|consen 52 VAEATEEDVDEAVKAARSAFKLVDW--------AKRDAAERGRLLRKLADLIEQDADVLAALEVLD-NGKPYPEALVSDL 122 (501)
T ss_pred eccccHHHHHHHHHHHHHhcCcCcc--------ccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccc-cCCcchhhhhcCc
Confidence 4445555555555444444443222 134678888999999999999888887777654 6778888887777
Q ss_pred CCCCcccccceecceeEEEEEE-----------ecCCCCcceeEEeeCC---hHHHHHHHhhcceeEEEECCCCC
Q 038769 94 KEDMLIAKDEIFGPVMVLMKFN-----------ANNRRYGLAAGIITND---LNTANTVSRSIRAGIIWANCYLA 154 (197)
Q Consensus 94 ~~~~~~~~eE~FGPvl~v~~~~-----------~n~~~~gL~~~v~t~d---~~~~~~~~~~l~~G~v~iN~~~~ 154 (197)
+....+++ .|++..-.+.-. .+..+.|..+.|--.| .-.+++++-.|.+|+++||-+..
T Consensus 123 ~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 123 PPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred hhhhhHHH--hhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 77665543 445544222111 7888899656555555 36789999999999999998854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 197 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 7e-54 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-53 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 5e-52 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-50 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-50 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-50 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-50 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-50 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-50 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-50 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 5e-49 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 7e-49 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 8e-49 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-38 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-38 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-38 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-38 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-38 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-38 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 2e-38 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-37 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 9e-37 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 1e-36 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 3e-35 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-35 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 5e-35 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-35 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-35 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-35 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-33 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-33 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-33 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-31 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-30 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 8e-30 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-29 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-29 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-29 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-26 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-26 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-25 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-24 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-24 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-24 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-24 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-23 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-23 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-23 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-23 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 8e-23 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-22 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-22 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-21 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-21 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-21 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-21 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 9e-21 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-20 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-20 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-19 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-19 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-18 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 2e-18 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-17 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-15 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-15 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-15 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-15 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-15 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-15 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-14 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-14 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-13 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 9e-13 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-11 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-10 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-10 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-10 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-10 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 1e-08 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-08 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-08 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-07 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-07 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 317 bits (815), Expect = e-108
Identities = 97/188 (51%), Positives = 134/188 (71%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+++IL IESGKKEGA +
Sbjct: 309 LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKL 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG G KGY+I+PT+F++V +DM IAK+EIFGPV +MKF ANN YGL
Sbjct: 369 ECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+AGI TND++ A TVS ++++G +W NCY CP+GG+KMSG GR+ G H+Y
Sbjct: 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488
Query: 184 VKSVVTPI 191
VK+V I
Sbjct: 489 VKTVTIKI 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-108
Identities = 92/192 (47%), Positives = 127/192 (66%), Gaps = 8/192 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+VQE IYDEF ++ V +AK+ VVG+PFD QGPQ+++ QF +IL YI +GK+EGA +
Sbjct: 308 TFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG +GY+I+PT+F +V++ M IAK+EIFGPVM ++KF ANN YGL
Sbjct: 368 LCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGL 427
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA + T DL+ AN +S++++AG +W NCY F P+GGYKMSG GR+ G L Y
Sbjct: 428 AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 487
Query: 184 VKSVVTPIHNSP 195
VK+V +
Sbjct: 488 VKTVTVKVPQKN 499
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-108
Identities = 71/186 (38%), Positives = 121/186 (65%), Gaps = 10/186 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++V+E I+++F +K+VE+ + +G+P + N GPQ ++ +++ Y + G KEGAT+
Sbjct: 328 LFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRY 121
+ GG V + G++ +PT+FT+V++ M IAK+E FGP+M++ +F AN +
Sbjct: 388 VCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEF 447
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GLA+G+ T D+N A VS ++AG ++ N Y D P+GG+K SGFG+D G +L++Y
Sbjct: 448 GLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEY 507
Query: 182 LHVKSV 187
L +K+V
Sbjct: 508 LRIKTV 513
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 316 bits (812), Expect = e-107
Identities = 75/195 (38%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + E I EF ++V+ K + DP + GP +++ Q+++IL ++ + K EGAT+
Sbjct: 300 LILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATI 359
Query: 72 LTGGKTVG--QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
LTGG +KG++IEPTI T+V +M I ++E+FGPV+ + F+ AN+ Y
Sbjct: 360 LTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVY 419
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GL A +I+NDL V+++ +AGI+W NC P+GG K SGFGR+ G L Y
Sbjct: 420 GLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNY 479
Query: 182 LHVKSVVTPIHNSPW 196
L VK V I PW
Sbjct: 480 LSVKQVTQYISEEPW 494
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 314 bits (808), Expect = e-106
Identities = 68/196 (34%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ VQEGI D ++L++ ++ GDP + G I++ +++ SY+ +G GA +
Sbjct: 310 LLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAEL 369
Query: 72 LTGGKTVGQ-KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
L GG+ +G+ G Y PT+F V DM IA++EIFGPV+ + F AN +G
Sbjct: 370 LLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFG 429
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
L+A + + +L TA R IRAG W N + + P GGYK SG GR+ G +Y
Sbjct: 430 LSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYS 489
Query: 183 HVKSVVTPI-HNSPWL 197
K V + +PW
Sbjct: 490 QFKGVHVTLGRPAPWF 505
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = e-106
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 13/198 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQ+ F + L + +A ++GDP D A + GP ++K Q +++LSYIE GK EGAT+
Sbjct: 298 VFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATL 357
Query: 72 LTGGKT---VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
+TGG V +G Y++PT+F +V +DM IA++EIFGPVM ++ F+ AN
Sbjct: 358 ITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATE 417
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
+GLA G+ T DL A+ V + AG +W N Y + P+GG K SGFGR+ +L
Sbjct: 418 FGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEH 477
Query: 181 YLHVKSVV--TPIHNSPW 196
Y +K+V T ++P+
Sbjct: 478 YSELKTVYVSTGKVDAPY 495
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 312 bits (801), Expect = e-105
Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I VQ I D+FE+ L+++ K +G+ FD GP I+ + ++I SY++ K EGAT+
Sbjct: 319 ILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATI 378
Query: 72 LTGGKTVGQ----KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
GGK + G + EPT+ TN M I ++E+FGPV+ + F AN+
Sbjct: 379 AVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDS 438
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGLA + + D+ A V+ ++ G +W N + + P+GGYK SG GR+ G + L
Sbjct: 439 IYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLE 498
Query: 180 KYLHVKSVVTPIHNSPW 196
+YL K ++T +
Sbjct: 499 EYLVSKHILTNTNPQLV 515
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 309 bits (795), Expect = e-105
Identities = 73/200 (36%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQ I +F +++V++ KA VVGDP G I+K Q D++L ++ KKEGA V
Sbjct: 303 VFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARV 362
Query: 72 LTGGKTVG------QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------AN 117
L GG+ + + GY++ P + N ++DM K+EIFGPVM ++ F+ AN
Sbjct: 363 LCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRAN 422
Query: 118 NRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDS 177
N +GLA+G+ T D++ A+ V+ ++ AG + N Y + P+GGYKMSGFGR+ G +
Sbjct: 423 NTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482
Query: 178 LHKYLHVKSVVTPI--HNSP 195
+ Y +K+V+ + +S
Sbjct: 483 VDYYSQLKTVIVEMGDVDSL 502
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 300 bits (771), Expect = e-101
Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 19/204 (9%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V+E I+++F K+VE+A+A VG P DP GP I+ + R+L Y+E+GK+EGA +
Sbjct: 311 LLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARL 370
Query: 72 LTGGKTVGQ--------KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------- 115
L GG+ +G Y+ PT+F + M IA++EIFGPV+V + F
Sbjct: 371 LVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRK 429
Query: 116 ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGL 175
AN+ +YGLAA + T DL A+ ++ + AG+++ N + P+GG K SG R+ G
Sbjct: 430 ANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGT 489
Query: 176 DSLHKYLHVKSVVTPI--HNSPWL 197
+L Y +K++ P+ + P
Sbjct: 490 YALDFYTDLKTIALPLRPPHVPKF 513
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 298 bits (766), Expect = e-101
Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-AT 70
IY Q+GIYD +KL G P D + GP + +R+ +E K G
Sbjct: 307 IYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIK 366
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
V+TGG+ GYY PT+ +D I + E+FGPV+ + F+ AN+ +YG
Sbjct: 367 VITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYG 426
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+ + T D+ A+ VS ++ G W N + ++ P+GG K+SG+G+D L L Y
Sbjct: 427 LASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYT 486
Query: 183 HVKSV 187
V+ V
Sbjct: 487 VVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 2e-99
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-AT 70
IY + GIY++ L D GP I+++Q DR+ S++E +
Sbjct: 309 IYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIE 368
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
+ TGG+T +G++ +PT+ ++ I + E+FGPV+ + +F AN+ YG
Sbjct: 369 ITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYG 428
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+ + T D++ A + ++ G W N + N+ P+GG K SG+G+D + +L Y
Sbjct: 429 LASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYT 488
Query: 183 HVKSV 187
V+ +
Sbjct: 489 AVRHI 493
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 5e-92
Identities = 71/195 (36%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I YDE + A VG P DPA GP I++KQ R+ YI G +EGA +
Sbjct: 294 ILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353
Query: 72 LTGGKTVG--QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
+ GG G++I+PT+F +V M IA++EIFGPV+ ++ ++ AN+ Y
Sbjct: 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVY 413
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKY 181
GLA + T D+ +S+ IR G N Y AFD P+GGYK SG GR+ G + + +
Sbjct: 414 GLAGSVWTTDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHF 472
Query: 182 LHVKSVVTPIHNSPW 196
KSV+ P+ +
Sbjct: 473 TQQKSVLLPMGYTVA 487
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 271 bits (696), Expect = 3e-90
Identities = 76/188 (40%), Positives = 106/188 (56%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V I D F +L E+ VG+P + GP I+KKQFD++ +YI G +EGA +
Sbjct: 288 VLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAEL 347
Query: 72 LTGGKTVGQ---KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
GG + KGY+ PTIF NV M IA++EIFGPVM ++ +N AN+ +
Sbjct: 348 FYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTK 407
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGLA +I D T + V+RSI AG + N D P+GGYK SG GR+ G + +
Sbjct: 408 YGLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEE 466
Query: 181 YLHVKSVV 188
+L VKS+
Sbjct: 467 FLEVKSIA 474
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 270 bits (693), Expect = 3e-89
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 12/187 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + +YDE +K V AK VGDP + GP I++K F++I+SYIE GKKEG +
Sbjct: 327 AVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RL 385
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+TGG+ G++I+PTI ++ + +I ++EIFGPV+ K N ANN YGL
Sbjct: 386 MTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGL 445
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFG-RDCGLDSLHK 180
+IT + R G ++ N C A P+GG+KMSG + G D L
Sbjct: 446 TGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLAL 505
Query: 181 YLHVKSV 187
++ K+V
Sbjct: 506 HMQAKTV 512
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 4e-88
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V++ IYD+ K + A+ VG + GP ++K+Q+D+I I+SG EGAT+
Sbjct: 309 MLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATL 368
Query: 72 LTGGKTVGQ---KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
+TGG + +GYY+ PT+F +VK M I ++EIFGPV+ L+ FN AN+
Sbjct: 369 VTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTE 428
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHK 180
YGL I + D + ++ +R+G++ N + +GG K SG R+ GL + +
Sbjct: 429 YGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKE 487
Query: 181 YLHVKSV 187
+L K++
Sbjct: 488 FLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 245 bits (629), Expect = 7e-80
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + +G Y+ ++++++A+ VG P + + GP ++ +Q ++LSYIE GK EG V
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GGK + +GY+I PT+FT V IA++EIFGPV+ +++ AN+ YGL
Sbjct: 387 -LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFGRDCG-LDSLHK 180
G+ + R G ++ N A P+GG+K+SG G LD L
Sbjct: 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRL 505
Query: 181 YLHVKSV 187
+L +K+V
Sbjct: 506 FLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 2e-77
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V ++DEF +K VE K GDP GP IN Q + IE KKEGATV
Sbjct: 300 VIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATV 359
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
G +G + P +F++V DM IA++EIFGP++ ++K + AN +GL
Sbjct: 360 QVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGL 416
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDN-DCPYGGYKMSGFGRDCGLDSLHKYL 182
+A + + D++ A + I +G++ N D +GG K SG GR G ++ ++
Sbjct: 417 SAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFT 476
Query: 183 HVKSV 187
+ +
Sbjct: 477 TDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 6e-74
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 14/189 (7%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ + +Y + +++ ++ + VGDP DP V+ GP I+ D +++ IE ++G V
Sbjct: 303 VLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRV 362
Query: 72 LTGGKTVGQKGYYIEPTIF---TNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
L GG+ +G Y++PT + +DM++ K E+F PV + ++ AN R
Sbjct: 363 LAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRP 420
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLH 179
YGL A + D+ R + G I+ N P+GG K SG R+ ++
Sbjct: 421 YGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVE 480
Query: 180 KYLHVKSVV 188
K++V
Sbjct: 481 AVTAYKTIV 489
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 2e-71
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V E I D+F + V KAK VG+P D + GP I+ + + + +E EG +
Sbjct: 281 ILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKL 340
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------ANNRRYGLA 124
L GGK + PTI V D ++ K E F PV+ +++ N AN+ YGL
Sbjct: 341 LLGGK---RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEYGLH 396
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYLH 183
+ I TND+N + + ++ G + N F D P+GG K SG GR+ ++ + +
Sbjct: 397 SAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSN 456
Query: 184 VKSVV 188
+K+++
Sbjct: 457 IKTII 461
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 6e-71
Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 35/211 (16%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+V E + + L K VG+P + AV G ++++Q++ +L+ I + ++E
Sbjct: 305 AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLA 364
Query: 72 LTGGKTV-----GQKGYYIEPTIF--TNVKEDMLIAKDEIFGPVMVLMKFN--------- 115
+ P +F + L+ E+FGPV + +
Sbjct: 365 YDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424
Query: 116 -------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND---------- 158
A + L A I +ND ++ + +
Sbjct: 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMP 484
Query: 159 -CPYGGYKMSGFGRDC-GLDSLHKYLHVKSV 187
+GG +G G + GL +L Y ++
Sbjct: 485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 1e-70
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQ+ + D+ + E + VG P D + P I++K I I+ + GAT+
Sbjct: 299 VFVQDSVADQLVANIKELVEQLTVGSPEDD-ADITPVIDEKSAAFIQGLIDDALENGATL 357
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L+G K ++G + PT+ +V M +A +E FGPV+ +++ +N YGL
Sbjct: 358 LSGNK---RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGL 414
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC-PYGGYKMSGFGRDCGLDSLHKYL 182
A I T D + A + + + G + N D P+ G K SG G SL
Sbjct: 415 QASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMT 474
Query: 183 HVKSVV 188
+ V
Sbjct: 475 RERVTV 480
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 3e-65
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 13/196 (6%)
Query: 12 IYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEGA 69
+ V +G + D +LV + VG PA G I+ + +L E +GA
Sbjct: 288 LLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGA 347
Query: 70 TVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRY 121
L + P I +V +E FGP++ +++++ AN +Y
Sbjct: 348 QPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQY 406
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAF-DNDCPYGGYKMSGFGRDCGLDSLHK 180
GLAAG++++ RAGI+ N L + P+GG SG R +
Sbjct: 407 GLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADY 466
Query: 181 YLHVK-SVVTPIHNSP 195
+ S+ +P + P
Sbjct: 467 CAYPVASLESPSVSLP 482
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 6e-65
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E + DE +K+ EK A +G+P D + P I+ K D + I +GAT
Sbjct: 290 VLVMESVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATA 348
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
LT K ++G I P +F V DM +A +E FGPV+ +++ +N YGL
Sbjct: 349 LTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGL 405
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKYL 182
A I TND A ++ + G + N D P+ G K SG G S+
Sbjct: 406 QASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMT 465
Query: 183 HVKSVV 188
VKSVV
Sbjct: 466 TVKSVV 471
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 2e-61
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PAVNQGPQINKKQFDRILSYIESGKKEGAT 70
+YVQ+GIYD+F +L E +A G+P + + GP IN +R+ + +EGA
Sbjct: 291 VYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGAR 350
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
V GGK V KGYY PT+ +V+++M I +E FGPV+ ++ F+ AN+ YG
Sbjct: 351 VAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYG 410
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
L + I T +LN A + ++ G + N + G++ SG G G LH+YL
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYL 470
Query: 183 HVKSV 187
+ V
Sbjct: 471 QTQVV 475
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 3e-60
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+++ E I+DE +L + VG+P+DP V GP K+ L +E KKEG TV
Sbjct: 309 LFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTV 368
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+ GGK + + G Y+EPTI T + D IA E F P++ + KF N + GL
Sbjct: 369 VYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGL 428
Query: 124 AAGIITNDLNTANTV--SRSIRAGIIWANCYLA-FDNDCPYGGYKMSGFGRDCGLDSLHK 180
++ I T DL + GI+ N + + +GG K +G GR+ G D+ +
Sbjct: 429 SSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQ 488
Query: 181 YLHVKSV 187
Y+ +
Sbjct: 489 YMRRSTC 495
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 201 bits (512), Expect = 4e-60
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V + +YD+F ++LV AKA VG DPA G + K I Y E GK+EG V
Sbjct: 821 VIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGH-V 879
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L +GY++ TI +K + IA++EIFGPV+ +M+ AN+ ++ L
Sbjct: 880 LYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFAL 939
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYL--AFDNDCPYGGYKMSGFG-RDCGLDSLHK 180
GI + R R G ++ N A P+GG +MSG G + G D L
Sbjct: 940 TGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLH 999
Query: 181 YLHVKSV 187
++ + V
Sbjct: 1000 FMDPRVV 1006
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 1e-59
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V++ YDE +L GDP + P ++K +++ + ++ GA V
Sbjct: 271 IIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKV 330
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+ KG + PTI T++ +D + E+FGP+ + AN+ YGL
Sbjct: 331 FYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+ +I +D++ A VS I G+ N + P+GG K SG+GR+ L +++
Sbjct: 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450
Query: 184 VKSVVTPIHNSP 195
V+ N+
Sbjct: 451 EHLVIDVTKNNQ 462
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 4e-59
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
V+EGI F + V A A +GDP + GP D + +++ EGA +
Sbjct: 274 FIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARL 333
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
L GG+ + +G Y T+ +V DM + E+FGPV + AN+ +GL
Sbjct: 334 LLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGL 393
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
+A I T D A ++ + G ++ N Y A D +GG K SGFGR+ LH++ +
Sbjct: 394 SATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453
Query: 184 VKSVV 188
V++V
Sbjct: 454 VQTVW 458
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 6e-59
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I V + +YDEF +K + K GD DP GP IN++Q ++ L IE K +G +
Sbjct: 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIEL 352
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GK G + P +F + IA+ E+F P+ ++K AN+ YGL
Sbjct: 353 AVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGL 409
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDN-DCPYGGYKMSGFGRDCGLDSLHKYL 182
++ + T+DL + I +G+ N D+ + +GG K SG GR + ++
Sbjct: 410 SSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFT 469
Query: 183 HVKSV 187
K +
Sbjct: 470 VTKWI 474
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 4e-55
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV +YDEF K + K VGDP D GP+ N+++ D I + K+GATV
Sbjct: 297 LYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATV 356
Query: 72 LTGGK----TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
TGGK + G + EPT+ +VK+D ++ +E FGP++ ++K + N+
Sbjct: 357 ATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDS 416
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLH 179
YGL+A + T N + G ++ N + + + G+K SGFG + G L
Sbjct: 417 IYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLE 476
Query: 180 KYLHVKSV 187
+YL K+V
Sbjct: 477 QYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-54
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YVQ+G+YD F +KL + +GD D V GP I++K ++ +I ++GA V
Sbjct: 294 LYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARV 353
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+ GGK + G + +PTI +V + ++K+E FGP+ L +F AN+ +GL
Sbjct: 354 VCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGL 413
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA DL+ V ++ GI+ N + + P+GG K SG GR+ + YL
Sbjct: 414 AAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLE 473
Query: 184 VKSV 187
+K +
Sbjct: 474 IKYM 477
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-54
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+V E +YD F KL VG + GP IN+ ++ S+I +GA++
Sbjct: 297 FFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASL 356
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+TGGK + EPT+ T VK DM +AK+E FGP+ L +F AN+ +GL
Sbjct: 357 MTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGL 416
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA + + D+ V+ ++ G++ N L + P+GG K SG GR+ + Y+
Sbjct: 417 AAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVV 476
Query: 184 VKSVVTPI 191
+K + +
Sbjct: 477 IKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 3e-54
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
IYVQ G+YD+F +KL K K VG+ +P V GP I +K ++ ++IE +GA +
Sbjct: 317 IYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKL 376
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
+TGGK +G G + EP I T V DML+AK+E FGP+ L F+ AN+ +GL
Sbjct: 377 ITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLH 183
AA T + + A VS ++ G++ N L + P+GG K SG GR+ + +YL
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLE 494
Query: 184 VKSVVTPIH 192
K + +
Sbjct: 495 TKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 3e-53
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I+V E + D F +KL E+ VGD + ++ GP INK+ FD++ +++ +GA++
Sbjct: 296 IFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355
Query: 72 LTGGKTVGQ-KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
+ G + G + PT+ V +M ++E FGP++ + F N+ +G
Sbjct: 356 VAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFG 415
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA+ + T D A V+ +R G + N + P+GG K SG GR+ GL+ L +++
Sbjct: 416 LASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFV 475
Query: 183 HVKSV 187
++V
Sbjct: 476 EAQTV 480
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 6e-53
Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAW-VVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
VQ GI+D F K E K VG+ F+ QGP IN+K +++ + +GAT
Sbjct: 298 FLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGAT 357
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
V+TGGK + EPT+ NV +DML +E FGP+ ++KF+ AN G
Sbjct: 358 VVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVG 417
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
LA + D V+ + G++ N L +CP+GG K SG GR+ + +YL
Sbjct: 418 LAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYL 477
Query: 183 HVKSV 187
+K V
Sbjct: 478 ELKYV 482
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 6e-47
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++VQE + D + + A+ +GDP D A + GP I+ + R+ ++I K E +
Sbjct: 800 LFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRY 121
G +G ++ P IF + +E+FGP++ ++++ Y
Sbjct: 859 HFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIERTGY 914
Query: 122 GLAAGIITNDLNTANTVSRSIRAGIIWAN--CYLAFDNDCPYGGYKMSGFG-RDCGLDSL 178
GL G+ + ++ + ++ G I+ N A P+GG +SG G + G L
Sbjct: 915 GLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYL 974
Query: 179 HKYLHVKSV 187
++ ++V
Sbjct: 975 ARFATEQTV 983
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-38
Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 10 PNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGA 69
+ V+EGI DEF KL EK +G+ D V GP I + R LSYIE G +EGA
Sbjct: 287 AVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGA 346
Query: 70 TVLTGGKTVG-QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR 120
++ G+ GY++ PTIF NV +M I KDEIF PV+ +++ AN
Sbjct: 347 RLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSE 406
Query: 121 YGLAAGIITNDLNTANTVSRSIRAGIIWANCY----LAFDNDCPYGGYKMSGFGRD---C 173
+ A + T++ N +I AG++ N +AF P+ G+K S FG
Sbjct: 407 FANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFF---PFSGWKSSFFG-TLHAN 462
Query: 174 GLDSLHKYLHVKSVVT 189
G DS+ Y K V
Sbjct: 463 GKDSVDFYTRKKVVTA 478
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 1e-37
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+ V E + KLV ++ +G D + GP + K+ RI S I+SG ++GA +
Sbjct: 311 VPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKL 370
Query: 72 LTGGKTV----GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNR 119
+ G+ + G++I +F +V DM I K EIFGPV+ +++
Sbjct: 371 VVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKH 430
Query: 120 RYGLAAGIITNDLNTANTVSRSIRAGIIWANCY----LAFDNDCPYGGYKMSGFGRD--- 172
YG I T D + A + I G++ N LA+ +GG+K S FG D
Sbjct: 431 EYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYH---SFGGWKSSSFG-DLNQ 486
Query: 173 CGLDSLHKYLHVKSVVT 189
G DS+ + K++ +
Sbjct: 487 HGTDSIKFWTRTKTITS 503
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 6e-35
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 31/180 (17%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEG-AT 70
YV + ++ + + +L+E+ VGDP D I+ K F RI ++E + +
Sbjct: 355 YVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLS 414
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNANN-----------R 119
+L GG+ GYY+EP I + I K+EIFGPV+ + + +
Sbjct: 415 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTT 474
Query: 120 RYGLAAGIITNDLNTANTVSRSIR--AGIIWANCYLAFDND-C--------PYGGYKMSG 168
YGL + D +R +R AG N Y+ ND P+GG + SG
Sbjct: 475 SYGLTGAVFAQDKAIVQEATRMLRNAAG----NFYI---NDKSTGSVVGQQPFGGARASG 527
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 7e-33
Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 35/198 (17%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
++ + +E A++ + P+ P I + + G +G V
Sbjct: 295 VFALNTPETQ---AFIETAQS--LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDV 346
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDML---IAKDEIFGPVMVLMKFN--------ANNRR 120
+ + +F E+ ++EIFGP +++ +
Sbjct: 347 TFSQ----AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLA 402
Query: 121 YGLAAGIIT--NDLNTANTVSRSI--RAGIIWANCYLAFDNDC-------PYGGYKMSGF 169
L A I D + + + AG + N + PY S
Sbjct: 403 GSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA- 461
Query: 170 GRDCGLDSLHKYLHVKSV 187
G +++H++L +
Sbjct: 462 STSVGAEAIHRWLRPVAY 479
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-31
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 22/160 (13%)
Query: 11 NIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
+ V + +YDE +++ + D V + I+ +I+ + E A
Sbjct: 251 AVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDGALNAKIVGQPATAIAEMA- 308
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------------ANN 118
G V + V D A E P + + + +
Sbjct: 309 ----GVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEI 363
Query: 119 RRYGLAAGIITNDLNTANTV---SRSIRAGIIWANCYLAF 155
G +G+ TN A+ + ++ I N
Sbjct: 364 GGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTH 403
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-28
Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 36/188 (19%)
Query: 8 QF---PN-IYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIE 62
QF P V EG D F VE + + + + +F
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF-------- 372
Query: 63 SGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDML---IAKDEIFGPVMVLMKFN---- 115
+ L ++ G P +F L +E+FGP+ ++++
Sbjct: 373 -ATRNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAE 428
Query: 116 ----ANNRRYGLAAGIIT--NDLNTANTVSR--SIRAGIIWANCYLAFDNDCPY----GG 163
A + L A I DL TA + +AG + N + G
Sbjct: 429 MEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGP 488
Query: 164 YKMSGFGR 171
Y S
Sbjct: 489 YPASTNFG 496
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 6e-21
Identities = 28/226 (12%), Positives = 61/226 (26%), Gaps = 51/226 (22%)
Query: 3 VCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGD--------PFDPAVNQGPQINKKQF 54
+C + Q ++ V+ + + ++ ++ P + P I K
Sbjct: 250 ICASEQ--SVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSV 307
Query: 55 DRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKF 114
I + A VL +T V + ++ E P++
Sbjct: 308 QHIANLAGLTVPADARVLIAEET--------------KVGAKIPYSR-EKLAPILAFYTA 352
Query: 115 N--------ANNRRY----GLAAGIITNDLNTANTVSRSIRAGIIWANCYLAF------D 156
+ + Y G I + D + + N A
Sbjct: 353 ETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATT 412
Query: 157 NDCP-----YGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNSPWL 197
N P G S + G ++L +++ + T + +
Sbjct: 413 NLVPALTLGCGAVGGSSSSDNIGPENL---FNIRRIATGVLELEDI 455
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 2e-19
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 20/196 (10%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
I I ++ +KL + K + D + G I+ + F R++ IE K V
Sbjct: 266 ILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHFQRVMGLIEGQK-----V 319
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGL 123
GG YI PTI T+V + ++EIFGPV+ ++ N R L
Sbjct: 320 AYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 124 AAGIITNDLNTANTVSRSIRAGIIWAN-CYLAFDNDC-PYGGYKMSGFGRDCGLDSLHKY 181
A + +++ + +G + AN + P+GG SG G G S +
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438
Query: 182 LHVKSVVTPIHNSPWL 197
H +S +
Sbjct: 439 SHRRSCL---VRPLMN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 2e-12
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 12 IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATV 71
+YV + D ++LVE+ K + + G + ++Q R++S +E+ + V
Sbjct: 276 LYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQVQRLVSLLEATQ---GQV 327
Query: 72 LTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFNA---------NNRRYG 122
L G + + T+ V+ + + +E+FGP++ +++F++ +
Sbjct: 328 LVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDC---------PYGGYKMSGFGRDC 173
LA + D++ A + I++G N P+GG SG G
Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSG---DAQV----NGVMLHAFSPYLPFGGIGASGMGEYH 439
Query: 174 GLDSLHKYLHVKSVVT 189
G S + H KSV
Sbjct: 440 GHFSYLTFTHKKSVRI 455
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 99.97 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 99.97 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 99.97 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 99.95 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-54 Score=377.50 Aligned_cols=192 Identities=39% Similarity=0.737 Sum_probs=184.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |+|||+++||+|+++|+++++++++|||.++++++|||+++.+++++.++|++++++|+++++||+...
T Consensus 283 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~ 360 (490)
T 2wme_A 283 GQVCTNGT--RVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD 360 (490)
T ss_dssp GCCTTCCC--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCT
T ss_pred CCcCCCce--eeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 361 ~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~ 440 (490)
T 2wme_A 361 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440 (490)
T ss_dssp TTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred ccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEE
Confidence 269999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNS 194 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~ 194 (197)
||++....+.+||||+|.||+|+++|.+|+++|++.|+|++++++.
T Consensus 441 iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g~~ 486 (490)
T 2wme_A 441 INTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp ESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred EeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECCCC
Confidence 9998777789999999999999999999999999999999998753
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=364.68 Aligned_cols=195 Identities=36% Similarity=0.716 Sum_probs=185.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++++++|+++++||....
T Consensus 310 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 387 (520)
T 3ed6_A 310 GQVCSAGS--RILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDR 387 (520)
T ss_dssp GTSTTCCC--EEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCC
T ss_pred CCCcccCc--eEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred ---CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 80 ---QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 80 ---~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 388 ~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~ 467 (520)
T 3ed6_A 388 DDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVW 467 (520)
T ss_dssp GGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred ccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEE
Confidence 369999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC--CCCC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN--SPWL 197 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~--~~~~ 197 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.. ..||
T Consensus 468 iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 468 INDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp ESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred ECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 999987778999999999999999999999999999999998863 3464
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-51 Score=360.93 Aligned_cols=195 Identities=38% Similarity=0.750 Sum_probs=185.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 291 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 368 (503)
T 3iwj_A 291 GQICSATS--RLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH 368 (503)
T ss_dssp GCCTTCEE--EEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT
T ss_pred CCCcccCC--eeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCcc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 369 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN 448 (503)
T 3iwj_A 369 LKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVN 448 (503)
T ss_dssp CCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEES
T ss_pred CCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEc
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC--CCCC
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN--SPWL 197 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~--~~~~ 197 (197)
++....+.+||||+|.||+|+++|.+++++|++.|+|+++... ..||
T Consensus 449 ~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 449 CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp SSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred CCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 9877778999999999999999999999999999999988753 3564
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=361.95 Aligned_cols=189 Identities=29% Similarity=0.568 Sum_probs=182.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGA-TVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~ 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+ ++++||...+
T Consensus 300 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~ 377 (498)
T 4f3x_A 300 GQDCTAAC--RIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS 377 (498)
T ss_dssp GCSTTCEE--EEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCC
T ss_pred CCCccCCc--eEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCC
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999 9999998654
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 378 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~ 457 (498)
T 4f3x_A 378 DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINT 457 (498)
T ss_dssp SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESC
T ss_pred CCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcC
Confidence 579999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 458 ~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 458 HFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp CSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 9877799999999999999999999999999999998865
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=361.69 Aligned_cols=188 Identities=31% Similarity=0.552 Sum_probs=180.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+.
T Consensus 288 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 365 (484)
T 3ifg_A 288 GQTCVCTN--RFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL 365 (484)
T ss_dssp GCSTTCCC--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTT
T ss_pred CCcccCCC--eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 366 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~ 445 (484)
T 3ifg_A 366 GHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTG 445 (484)
T ss_dssp CTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCS
T ss_pred CCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCC
Confidence 79999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 446 ~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 446 LISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 76778999999999999999999999999999999864
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-51 Score=360.90 Aligned_cols=190 Identities=26% Similarity=0.472 Sum_probs=182.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+.
T Consensus 262 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~ 339 (484)
T 3ros_A 262 GQVCTSSK--RIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDS 339 (484)
T ss_dssp GCCTTSCC--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCC
T ss_pred CCCccCCc--eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986545
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 340 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~ 419 (484)
T 3ros_A 340 KGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGR 419 (484)
T ss_dssp SSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSC
T ss_pred CCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCC
Confidence 79999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
....+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 420 ~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 420 WITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 7778999999999999999999999999999999998764
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-51 Score=360.88 Aligned_cols=190 Identities=29% Similarity=0.569 Sum_probs=181.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+.
T Consensus 287 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~ 364 (506)
T 3rh9_A 287 GQTCVCAN--RIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL 364 (506)
T ss_dssp GCSSSSCC--EEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGC
T ss_pred CCCcccCc--EEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999975433
Q ss_pred -CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 81 -KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 81 -~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 365 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~ 444 (506)
T 3rh9_A 365 GDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNT 444 (506)
T ss_dssp CSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESC
T ss_pred CCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcC
Confidence 79999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus 445 ~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 445 GTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp CCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred CCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 98777899999999999999999999999999999988764
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=360.26 Aligned_cols=190 Identities=35% Similarity=0.673 Sum_probs=183.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.....
T Consensus 301 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~ 378 (528)
T 3u4j_A 301 GQCCISGS--RLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR 378 (528)
T ss_dssp GCCTTCEE--EEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT
T ss_pred CCCCcCCC--EEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred -CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 81 -KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 81 -~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 379 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~ 458 (528)
T 3u4j_A 379 EAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINS 458 (528)
T ss_dssp TTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESC
T ss_pred CCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECC
Confidence 79999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+....+.+||||+|.||+|+++|.+|+++|++.|+|+++.+
T Consensus 459 ~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 459 VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp CSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred CCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 98778899999999999999999999999999999998875
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-51 Score=359.86 Aligned_cols=189 Identities=38% Similarity=0.771 Sum_probs=180.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|||.++++++|||+++.+++++.++|++++++|+++++||+....
T Consensus 319 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~ 396 (517)
T 2o2p_A 319 GENCIAAG--RLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396 (517)
T ss_dssp GCCTTCEE--EEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSS
T ss_pred CCCCcCCe--EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 397 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN 476 (517)
T 2o2p_A 397 PGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN 476 (517)
T ss_dssp SSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEES
T ss_pred CCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEEC
Confidence 69999999999999999999999999999999998 89999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
++....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 477 ~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~~ 517 (517)
T 2o2p_A 477 TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 517 (517)
T ss_dssp CSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEeeC
Confidence 98777789999999999999999999999999999998753
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=356.98 Aligned_cols=191 Identities=51% Similarity=0.968 Sum_probs=182.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|||.|+++++|||+++.+++++.++|++++++|+++++||+..+.
T Consensus 300 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~ 377 (501)
T 1bxs_A 300 GQCCIAAS--RLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN 377 (501)
T ss_dssp TCCTTCCC--EEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS
T ss_pred CCCCCCCC--EEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986534
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 378 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~ 457 (501)
T 1bxs_A 378 KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY 457 (501)
T ss_dssp SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCC
T ss_pred CCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCC
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++++..
T Consensus 458 ~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~~ 498 (501)
T 1bxs_A 458 SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 498 (501)
T ss_dssp CCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSC
T ss_pred CCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccCC
Confidence 76678999999999999999999999999999999887643
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=355.00 Aligned_cols=188 Identities=32% Similarity=0.597 Sum_probs=181.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 285 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 362 (481)
T 3jz4_A 285 GQTCVCAN--RLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHER 362 (481)
T ss_dssp GCSTTSEE--EEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTT
T ss_pred CCcccCCc--EEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986444
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 363 ~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 442 (481)
T 3jz4_A 363 GGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTG 442 (481)
T ss_dssp CTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCS
T ss_pred CCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 443 ~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 443 IISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 77778999999999999999999999999999999875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-51 Score=359.21 Aligned_cols=188 Identities=37% Similarity=0.652 Sum_probs=181.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...
T Consensus 308 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~-- 383 (504)
T 3ek1_A 308 GQTCVCAN--RIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL-- 383 (504)
T ss_dssp GCSTTSEE--EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--
T ss_pred CCCCCCCC--EEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999999763
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 384 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~ 463 (504)
T 3ek1_A 384 GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTG 463 (504)
T ss_dssp ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCS
T ss_pred CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++.++
T Consensus 464 ~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 464 LISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp CCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred CCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 7777899999999999999999999999999999988754
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=357.34 Aligned_cols=190 Identities=34% Similarity=0.580 Sum_probs=180.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce--e
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT--V 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--~ 78 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.. .
T Consensus 288 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 365 (497)
T 3k2w_A 288 GQVCTCVE--RLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365 (497)
T ss_dssp GCSTTSEE--EEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC----
T ss_pred CCCCcCCc--EEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCc
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999973 2
Q ss_pred CC--CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 79 GQ--KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 79 ~~--~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
+. .|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 366 ~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 445 (497)
T 3k2w_A 366 EGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVY 445 (497)
T ss_dssp -----CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred cccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence 22 69999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 149 ANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 149 iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 446 vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 446 INRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp ESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred EcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 99998777999999999999999999999999999999998764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=356.58 Aligned_cols=187 Identities=27% Similarity=0.448 Sum_probs=178.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|||. +++++||++++.+++++.++|++++++|+++++||+.
T Consensus 290 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--- 363 (505)
T 3prl_A 290 GQRCTAIK--RVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--- 363 (505)
T ss_dssp GCCSSSEE--EEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---
T ss_pred CCccccCc--eEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---
Confidence 89999966 99999999999999999999999999999 9999999999999999999999999999999999974
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 364 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~ 443 (505)
T 3prl_A 364 QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAK 443 (505)
T ss_dssp ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSC
T ss_pred CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 153 LA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 153 ~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++..
T Consensus 444 ~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~~ 485 (505)
T 3prl_A 444 TERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAE 485 (505)
T ss_dssp CCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred CCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCCC
Confidence 76 568899999999999999999999999999999988753
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=354.40 Aligned_cols=187 Identities=34% Similarity=0.626 Sum_probs=179.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ee
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEG-ATVLTGGK-TV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~ 78 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++| +++++||+ ..
T Consensus 298 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~ 375 (495)
T 1wnd_A 298 GQDCTAAC--RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK 375 (495)
T ss_dssp GCSTTCCC--EEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS
T ss_pred CCCCCCCc--EEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999 99999997 43
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
+ .|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 376 ~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN 454 (495)
T 1wnd_A 376 G-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVN 454 (495)
T ss_dssp S-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEES
T ss_pred C-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 2 69999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 455 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 455 THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp CCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9877778999999999999999999999999999999875
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=356.53 Aligned_cols=190 Identities=37% Similarity=0.691 Sum_probs=181.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++|+ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||+...
T Consensus 285 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~ 362 (495)
T 3b4w_A 285 GQGCVNQT--RILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG 362 (495)
T ss_dssp GCCTTCEE--EEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT
T ss_pred CCCCCCCe--EEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 363 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN 442 (495)
T 3b4w_A 363 LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN 442 (495)
T ss_dssp CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEES
T ss_pred ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEEC
Confidence 259999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
++. ..+.+||||+|.||+|+++|.+++++|++.|+|++++..
T Consensus 443 ~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~~~ 484 (495)
T 3b4w_A 443 WYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGY 484 (495)
T ss_dssp SCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCTTC
T ss_pred CCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEccCc
Confidence 987 778999999999999999999999999999999887643
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=352.00 Aligned_cols=188 Identities=35% Similarity=0.594 Sum_probs=179.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~-~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.+ +++++|||+++.+++++.++|++++++|+++++||+..+
T Consensus 282 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~ 359 (479)
T 2imp_A 282 GQVCNCAE--RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359 (479)
T ss_dssp TCCSSSCS--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred CCcCcCCc--EEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC
Confidence 89999966 999999999999999999999999999999 999999999999999999999999999999999997533
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 360 ~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~ 439 (479)
T 2imp_A 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR 439 (479)
T ss_dssp SSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESS
T ss_pred CCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECC
Confidence 368999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 440 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 440 ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 877678999999999999999999999999999999875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=356.85 Aligned_cols=190 Identities=48% Similarity=0.908 Sum_probs=181.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|||.++++++|||+++.+++++.++|++++++|+++++||+..+.
T Consensus 299 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~ 376 (500)
T 1o04_A 299 GQCSCAGS--RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376 (500)
T ss_dssp GCCTTCEE--EEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS
T ss_pred CCCCCCCC--EEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 377 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~ 456 (500)
T 1o04_A 377 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY 456 (500)
T ss_dssp SSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCS
T ss_pred CCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCC
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 457 ~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 457 DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp SCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred CCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 7667899999999999999999999999999999988764
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-50 Score=352.54 Aligned_cols=185 Identities=35% Similarity=0.618 Sum_probs=175.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-eeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGK-TVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~~~ 79 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||. ...
T Consensus 300 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~ 377 (497)
T 3i44_A 300 GQSCNAPT--RMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377 (497)
T ss_dssp GCCTTCCC--EEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT
T ss_pred CCCcccCC--EEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999994 322
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 378 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~i 457 (497)
T 3i44_A 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEV 457 (497)
T ss_dssp TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEE
T ss_pred cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEE
Confidence 269999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEE
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 188 (197)
|. ....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 458 N~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 458 NG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp TT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred CC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 95 445688999999999999999999999999999984
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-50 Score=351.49 Aligned_cols=187 Identities=31% Similarity=0.522 Sum_probs=178.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||..
T Consensus 272 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--- 346 (486)
T 3pqa_A 272 GQVCISVG--MILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--- 346 (486)
T ss_dssp GCSTTSEE--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---
T ss_pred CCCccCCc--EEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE-------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYL 153 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~-------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 153 (197)
.|+|++|||+ +++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+++
T Consensus 347 ~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~ 425 (486)
T 3pqa_A 347 DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSS 425 (486)
T ss_dssp ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECHHHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCT
T ss_pred CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCC
Confidence 5899999999 999999999999999999999998 99999999999999999999999999999999999986
Q ss_pred C-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 154 A-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 154 ~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
. ..+.+||||+|.||+|+++|.+++++|++.|+|+++...
T Consensus 426 ~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~ 466 (486)
T 3pqa_A 426 LFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466 (486)
T ss_dssp TCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred CcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCc
Confidence 5 346999999999999999999999999999999988754
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-50 Score=351.44 Aligned_cols=189 Identities=31% Similarity=0.529 Sum_probs=182.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.
T Consensus 265 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~ 342 (462)
T 3etf_A 265 GQVCAAAK--RFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAG 342 (462)
T ss_dssp GCCTTCEE--EEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS
T ss_pred CCcccCCc--EEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999986555
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 343 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~ 422 (462)
T 3etf_A 343 EGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGY 422 (462)
T ss_dssp SSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSC
T ss_pred CCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCC
Confidence 79999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
....+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 423 ~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 423 SASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 877789999999999999999999999999999998764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-50 Score=354.45 Aligned_cols=190 Identities=39% Similarity=0.761 Sum_probs=181.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||+..
T Consensus 294 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~ 371 (503)
T 1a4s_A 294 GQVCTNGT--RVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTP 371 (503)
T ss_dssp GCCTTCCC--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCC
T ss_pred CCCCcCCc--EEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccc
Confidence 89999966 99999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred C----CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeE
Q 038769 79 G----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGI 146 (197)
Q Consensus 79 ~----~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~ 146 (197)
+ ..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+
T Consensus 372 ~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 451 (503)
T 1a4s_A 372 SDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451 (503)
T ss_dssp SSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSE
T ss_pred ccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeE
Confidence 2 259999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 147 IWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 147 v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+++++
T Consensus 452 V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~ 497 (503)
T 1a4s_A 452 CYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp EEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred EEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEccC
Confidence 9999987777889999999999999999999999999999988764
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-50 Score=353.24 Aligned_cols=192 Identities=31% Similarity=0.497 Sum_probs=164.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||..
T Consensus 291 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--- 365 (508)
T 3r64_A 291 GQICMSIN--RVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--- 365 (508)
T ss_dssp TCTTTCCS--EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---
T ss_pred CCCcccCc--EEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 366 ~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~ 445 (508)
T 3r64_A 366 EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDL 445 (508)
T ss_dssp ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-
T ss_pred CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC-----CCCCC
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH-----NSPWL 197 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~-----~~~~~ 197 (197)
+.. .+.+||||+|.||+|+++|.+++++|++.|+|++++. +.+||
T Consensus 446 ~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 446 TVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp -------------------CCCHHHHHHHTEEEEEEEEECCSTTCCCC---
T ss_pred CCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccchhcchhhc
Confidence 753 6899999999999999999999999999999999875 45665
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=352.22 Aligned_cols=189 Identities=38% Similarity=0.712 Sum_probs=180.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||+...
T Consensus 302 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~ 379 (515)
T 2d4e_A 302 GERCTASS--RLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKT 379 (515)
T ss_dssp GCSTTCCC--EEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCB
T ss_pred CCCCCCCe--EEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred -------CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcce
Q 038769 80 -------QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRA 144 (197)
Q Consensus 80 -------~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 144 (197)
..|+|++|||+.+ +++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++
T Consensus 380 ~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 458 (515)
T 2d4e_A 380 SFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEA 458 (515)
T ss_dssp CTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCS
T ss_pred cccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCe
Confidence 2599999999999 9999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 145 GIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 145 G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 459 G~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 459 GMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp SEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcCC
Confidence 999999987777899999999999999999999999999999998765
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=356.31 Aligned_cols=190 Identities=41% Similarity=0.753 Sum_probs=181.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+
T Consensus 289 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~ 366 (517)
T 3r31_A 289 GQVCSNGT--RVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNN 366 (517)
T ss_dssp HHHHTTCE--EEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSS
T ss_pred CceeccCc--eEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcc
Confidence 79999966 999999999999999999999999999999999999999999999999999999999999999993121
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 367 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~i 446 (517)
T 3r31_A 367 VAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWI 446 (517)
T ss_dssp CCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEE
T ss_pred cCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEE
Confidence 369999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
|++....+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 447 N~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 447 NTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp SSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC
T ss_pred CCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCC
Confidence 9988778999999999999999999999999999999988765
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=353.74 Aligned_cols=190 Identities=35% Similarity=0.611 Sum_probs=179.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++++||...+.
T Consensus 318 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~ 394 (538)
T 3qan_A 318 GQKCSAGS--RAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSS 394 (538)
T ss_dssp GCSTTCCC--EEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECS
T ss_pred CCCCccCc--eeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999 99999987544
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC-C
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN-C 151 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN-~ 151 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+|| .
T Consensus 395 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~ 474 (538)
T 3qan_A 395 TGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRN 474 (538)
T ss_dssp SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred CCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCC
Confidence 79999999999999999999999999999999999 99999999999999999999999999999999999 5
Q ss_pred CCCC-CCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCCC
Q 038769 152 YLAF-DNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 152 ~~~~-~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
+... .+.+||||+|.||+| +++|.+++++|++.|+|+++...
T Consensus 475 ~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~~ 518 (538)
T 3qan_A 475 CTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYAE 518 (538)
T ss_dssp SCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC--
T ss_pred CCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEecCC
Confidence 5443 789999999999999 99999999999999999988753
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=350.84 Aligned_cols=189 Identities=32% Similarity=0.537 Sum_probs=179.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |+|||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||+..+.
T Consensus 300 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~ 377 (500)
T 2j6l_A 300 GQRCTTAR--RLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDR 377 (500)
T ss_dssp GCSTTCEE--EEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS
T ss_pred CCCcCCCc--EEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCC
Confidence 89999976 9999999999999999999999999999999999999999999999999999999999999999976434
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHH--hhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVS--RSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~--~~l~~G~v~iN 150 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.+++ +++++|+|+||
T Consensus 378 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN 457 (500)
T 2j6l_A 378 PGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVN 457 (500)
T ss_dssp SSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEES
T ss_pred CCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEEC
Confidence 69999999999999999999999999999999999 999999999999999999999999 77999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 458 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 458 IPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp SCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred CCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEeC
Confidence 8765 3478999999999999999999999999999998864
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=347.15 Aligned_cols=190 Identities=29% Similarity=0.499 Sum_probs=180.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|++++.||...+
T Consensus 263 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~ 340 (474)
T 4h7n_A 263 GQSCLSIE--RIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEEL 340 (474)
T ss_dssp GCSTTCEE--EEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEE
T ss_pred CCceeecc--cccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999999999999997643
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 341 ~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~ 420 (474)
T 4h7n_A 341 GGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIND 420 (474)
T ss_dssp TTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESS
T ss_pred CCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECC
Confidence 468999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCC
Q 038769 152 YLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 152 ~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+.. ..+.+||||+|.||+| +++|.+|+++|++.|+|+++..
T Consensus 421 ~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~ 464 (474)
T 4h7n_A 421 AALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN 464 (474)
T ss_dssp SCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS
T ss_pred CCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC
Confidence 865 4578999999999998 7899999999999999999875
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=350.83 Aligned_cols=187 Identities=28% Similarity=0.469 Sum_probs=179.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||+.
T Consensus 294 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--- 368 (501)
T 1uxt_A 294 GQRCDAIK--LVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--- 368 (501)
T ss_dssp GCSTTCEE--EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---
T ss_pred CCCCcCCc--EEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---
Confidence 89999976 9999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CC-ceEecEEEecCC---CCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 81 KG-YYIEPTIFTNVK---EDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 81 ~g-~~~~Ptv~~~~~---~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
.| +|++|||+.+++ ++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+
T Consensus 369 ~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~ 448 (501)
T 1uxt_A 369 LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448 (501)
T ss_dssp CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEE
Confidence 57 999999999999 999999999999999999999 999999999999999999999999999999999
Q ss_pred ECCC-CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 149 ANCY-LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 149 iN~~-~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
||++ ....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 449 iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~ 493 (501)
T 1uxt_A 449 INDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK 493 (501)
T ss_dssp ETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECT
T ss_pred EeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecC
Confidence 9998 5567899999999999999999999999999999998864
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=348.88 Aligned_cols=187 Identities=35% Similarity=0.586 Sum_probs=179.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++|+ |||||++++|+|+++|++++++ +++|+|.++++++|||+++.+++++.++|++++++|+++++||+...
T Consensus 289 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~ 366 (487)
T 2w8n_A 289 GQTCVCSN--QFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366 (487)
T ss_dssp SCCCSEEE--EEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT
T ss_pred CCccccCC--EEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC
Confidence 89999976 9999999999999999999999 99999999999999999999999999999999999999999997643
Q ss_pred CCCc-eEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 QKGY-YIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 ~~g~-~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+ |++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 367 -~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN 445 (487)
T 2w8n_A 367 -LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVN 445 (487)
T ss_dssp -TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEES
T ss_pred -CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEc
Confidence 688 99999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 151 CYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 151 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
++....+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 446 ~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 446 EGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp CSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 9877677899999999999999999999999999999875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=351.14 Aligned_cols=190 Identities=27% Similarity=0.430 Sum_probs=180.1
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee-
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~- 78 (197)
||.|++++ |+|||++ ++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...
T Consensus 301 GQ~C~a~~--rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 378 (521)
T 4e4g_A 301 GERCMAIS--VAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFK 378 (521)
T ss_dssp GCCTTSEE--EEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred CCCcccCe--EEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccC
Confidence 89999966 9999999 9999999999999999999999999999999999999999999999999999999999652
Q ss_pred ---CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEE
Q 038769 79 ---GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGII 147 (197)
Q Consensus 79 ---~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 147 (197)
...|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|
T Consensus 379 ~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V 458 (521)
T 4e4g_A 379 LQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMV 458 (521)
T ss_dssp CTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEE
T ss_pred CCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeE
Confidence 1379999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred EECCCCCC-CCCCCcCCCCCCCCC--CcchHHHHHhcccccEEEEeCC
Q 038769 148 WANCYLAF-DNDCPYGGYKMSGFG--RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 148 ~iN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+||++... .+.+||||+|.||+| +++|.+++++|++.|+|++++.
T Consensus 459 ~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 459 GVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp EESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred EECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEecC
Confidence 99998653 478999999999999 7999999999999999998764
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-49 Score=346.46 Aligned_cols=188 Identities=28% Similarity=0.499 Sum_probs=157.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..
T Consensus 284 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--- 358 (485)
T 4dng_A 284 GQICMIIN--RIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--- 358 (485)
T ss_dssp ----CCEE--EEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---
T ss_pred CCccccCC--EEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 359 ~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~ 438 (485)
T 4dng_A 359 VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQ 438 (485)
T ss_dssp ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC
T ss_pred CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCC
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCC-CCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC
Q 038769 153 LAF-DNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 153 ~~~-~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
... .+.+||||+|.||+|+++|.+++++|++.|+|++++..
T Consensus 439 ~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 480 (485)
T 4dng_A 439 SVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQY 480 (485)
T ss_dssp ----------------------CHHHHHHHEEEEEEEEEC--
T ss_pred CCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 753 68999999999999999999999999999999988753
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=345.73 Aligned_cols=185 Identities=33% Similarity=0.470 Sum_probs=177.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+|.+ ++++|||+++.+++++.++|++++++|+++++||+.
T Consensus 281 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--- 354 (475)
T 1euh_A 281 GQRCTAVK--RVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 354 (475)
T ss_dssp GCCSSSEE--EEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---
T ss_pred CCcCCCCc--EEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---
Confidence 89999976 999999999999999999999999999999 999999999999999999999999999999999976
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC-
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC- 151 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~- 151 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 355 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~ 434 (475)
T 1euh_A 355 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK 434 (475)
T ss_dssp ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSC
T ss_pred CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCC
Confidence 48999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+....+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 435 ~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 435 TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp CCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 6656789999999999999999999999999999998764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=343.97 Aligned_cols=186 Identities=42% Similarity=0.705 Sum_probs=155.9
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce-eC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT-VG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-~~ 79 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||.. ..
T Consensus 279 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~ 356 (478)
T 3ty7_A 279 GQVCTAGT--RVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE 356 (478)
T ss_dssp GCCTTCCC--EEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCT
T ss_pred CCCccCCC--eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCcc
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999943 21
Q ss_pred --CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 80 --QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 80 --~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+|
T Consensus 357 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 436 (478)
T 3ty7_A 357 GLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEI 436 (478)
T ss_dssp TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEE
T ss_pred ccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEE
Confidence 369999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEE
Q 038769 150 NCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVT 189 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 189 (197)
|+ ....+.+||||+|.||+|+++|.+++++|++.|+|+.
T Consensus 437 N~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 437 NE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp TT-CC----------------------CCGGGEEEEEEET
T ss_pred CC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 99 5556789999999999999999999999999999873
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=345.49 Aligned_cols=191 Identities=25% Similarity=0.477 Sum_probs=179.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~ 78 (197)
||.|++++ |+|||+++||+|+++|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+
T Consensus 345 GQ~C~A~~--rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~ 422 (563)
T 4e3x_A 345 GQKCSACS--RLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN 422 (563)
T ss_dssp GCSTTCEE--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE
T ss_pred CCCCcCCc--EEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC
Confidence 89999955 9999999999999999999999999999 9999999999999999999999999996 899999999876
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE----------e-cCCCCcceeEEeeCChHHHHHHHhhcc--ee
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------A-NNRRYGLAAGIITNDLNTANTVSRSIR--AG 145 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~-n~~~~gL~~~v~t~d~~~~~~~~~~l~--~G 145 (197)
+..|+|++|||+.+++++|.+++||+||||++|++|+ + |+++|||+++|||+|.+++.+++++++ +|
T Consensus 423 ~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG 502 (563)
T 4e3x_A 423 ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAG 502 (563)
T ss_dssp CSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCS
T ss_pred CCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCee
Confidence 5579999999999999999999999999999999995 6 799999999999999999999999976 99
Q ss_pred EEEECCCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCCC
Q 038769 146 IIWANCYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 146 ~v~iN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
+|+||+.++ ..+.+||||+|.||+| +++|.+++++|+++|+|+.+..+
T Consensus 503 ~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~ 553 (563)
T 4e3x_A 503 NFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKP 553 (563)
T ss_dssp EEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSC
T ss_pred EEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcC
Confidence 999999864 3578999999999998 89999999999999999988754
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=341.56 Aligned_cols=183 Identities=26% Similarity=0.414 Sum_probs=173.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++ +|+|.++++++|||+++.+++++.++| +|+++++||..+.
T Consensus 257 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~~- 327 (469)
T 3sza_A 257 GQTCVAPD--YILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGDA- 327 (469)
T ss_dssp GCCTTSCC--EEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEET-
T ss_pred CCCCCCCc--EEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccCC-
Confidence 89999966 99999999999999999999998 699999999999999999999999998 6899999998754
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 328 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~ 407 (469)
T 3sza_A 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDV 407 (469)
T ss_dssp TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCS
T ss_pred CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCC
Confidence 79999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 408 ~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~ 449 (469)
T 3sza_A 408 IVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPL 449 (469)
T ss_dssp SGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCS
T ss_pred CCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCc
Confidence 63 46899999999999999999999999999999988754
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-48 Score=342.44 Aligned_cols=186 Identities=31% Similarity=0.618 Sum_probs=175.1
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |||||++++|+|+++|+++++++++|+| ++++++|||+++.+++++.++|++++++| ++++||...+.
T Consensus 319 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~ 394 (516)
T 1uzb_A 319 GQKCSAAS--RLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394 (516)
T ss_dssp GCSTTCEE--EEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSS
T ss_pred CCccccCc--EEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCC
Confidence 89999966 9999999999999999999999999999 99999999999999999999999999999 89999976323
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 395 ~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~ 474 (516)
T 1uzb_A 395 EGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRK 474 (516)
T ss_dssp SSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSC
T ss_pred CCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCC
Confidence 69999999999999999999999999999999999 9999999999999999999999999999999999987
Q ss_pred CC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEe
Q 038769 153 LA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~ 190 (197)
.. ..+.+||||+|.||+| +++|.+++++|++.|+|+++
T Consensus 475 ~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 475 ITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 54 3578999999999999 57899999999999999875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=337.78 Aligned_cols=190 Identities=33% Similarity=0.485 Sum_probs=178.5
Q ss_pred CceeeecCCCE-EEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPN-IYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~r-v~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++|+ | +|||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||....
T Consensus 280 GQ~C~a~~--rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 356 (486)
T 1t90_A 280 GERCMACA--VVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV 356 (486)
T ss_dssp GCCTTCEE--EEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSC
T ss_pred CCCcccCC--eeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence 89999976 9 999999 9999999999999999999999999999999999999999999999999999999997421
Q ss_pred -CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 80 -QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 80 -~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 357 ~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN 436 (486)
T 1t90_A 357 SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN 436 (486)
T ss_dssp CSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEES
T ss_pred CCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 268999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCC--CcchHHHHHhcccccEEEEeCCC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFG--RDCGLDSLHKYLHVKSVVTPIHN 193 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~~~ 193 (197)
++.. ..+.+||||+|.||+| +++|.+|+++|++.|+|++++..
T Consensus 437 ~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~ 482 (486)
T 1t90_A 437 LGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPA 482 (486)
T ss_dssp CSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 8654 3478999999999999 89999999999999999987643
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=330.71 Aligned_cols=187 Identities=22% Similarity=0.324 Sum_probs=172.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++ .+|+++++||+..
T Consensus 296 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~ 372 (534)
T 2y53_A 296 GQKCTAIR--RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPL 372 (534)
T ss_dssp GCCTTSEE--EEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCC
T ss_pred CCcccCCC--EEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCccccc
Confidence 89999966 999999999999999999999999999999999999999999999999999999 6899999998642
Q ss_pred ---C-CCCceEecEEEecCCCC--CcccccceecceeEEEEEE----------------ecCCCCcceeEEeeCChHHHH
Q 038769 79 ---G-QKGYYIEPTIFTNVKED--MLIAKDEIFGPVMVLMKFN----------------ANNRRYGLAAGIITNDLNTAN 136 (197)
Q Consensus 79 ---~-~~g~~~~Ptv~~~~~~~--~~~~~eE~FGPvl~v~~~~----------------~n~~~~gL~~~v~t~d~~~~~ 136 (197)
+ ..|+|++|||+.+++++ |.+++||+||||++|++|+ +|+++|||++||||+|.+++.
T Consensus 373 ~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 452 (534)
T 2y53_A 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLG 452 (534)
T ss_dssp BSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHH
T ss_pred ccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 1 35999999999999877 6899999999999999875 689999999999999999999
Q ss_pred HHHhhc--ceeEEEECCCCC---------CCCCCCcCCCCCCCCCCc-chHHHHHhcccccEEEEe
Q 038769 137 TVSRSI--RAGIIWANCYLA---------FDNDCPYGGYKMSGFGRD-CGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 137 ~~~~~l--~~G~v~iN~~~~---------~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v~~~ 190 (197)
++++++ ++|+|+||++.. ..+.+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus 453 ~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 453 RLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp HHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred HHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 999999 899999998632 357899999999999999 699999999999998764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=346.11 Aligned_cols=189 Identities=32% Similarity=0.539 Sum_probs=178.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.++++++||+|++.+++++.++|++++++| ++++||..++.
T Consensus 812 GQ~C~A~~--rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~ 888 (1026)
T 4f9i_A 812 GQKCSACS--RVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAG 888 (1026)
T ss_dssp GCSTTCEE--EEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSS
T ss_pred CCCCCCCc--eEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCC
Confidence 89999955 9999999999999999999999999999999999999999999999999999999999 99999976543
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 889 ~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~ 968 (1026)
T 4f9i_A 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRN 968 (1026)
T ss_dssp SSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSC
T ss_pred CCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCC
Confidence 59999999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCC
Q 038769 153 LA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
++ ..+.+||||+|.||+| +.+|.+++++|++.|+|+++..
T Consensus 969 ~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 969 NTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp SCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred CCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence 65 3578999999999999 5789999999999999998764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=323.61 Aligned_cols=179 Identities=25% Similarity=0.399 Sum_probs=167.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|++++++++ |.++ ++|||+++.+++++.++|+++. +++++||....
T Consensus 267 GQ~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~~- 335 (457)
T 3lns_A 267 GQTXIAPD--YLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQADV- 335 (457)
T ss_dssp GCCTTSEE--EEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEEG-
T ss_pred CCCccCCc--eEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccCC-
Confidence 89999966 999999999999999999999997 6665 8999999999999999999863 59999998653
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecC-CCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN-RRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~-~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
.|+|+.|||+.+++++|.+++||+||||++|++|+ +|+ ++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 336 ~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~ 415 (457)
T 3lns_A 336 SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNG 415 (457)
T ss_dssp GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESC
T ss_pred CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcC
Confidence 69999999999999999999999999999999999 999 999999999999999999999999999999999
Q ss_pred CCC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEe
Q 038769 152 YLA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTP 190 (197)
Q Consensus 152 ~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 190 (197)
+.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 416 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 416 VMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp CSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 864 468999999999999999999999999999999763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=317.90 Aligned_cols=182 Identities=25% Similarity=0.354 Sum_probs=171.4
Q ss_pred CceeeecCCCEEEEeCcc-HHHHHHHHHHHHhccccCC-CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v-~d~f~~~l~~~~~~l~vG~-p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 78 (197)
||.|++++ |+|||+++ +|+|+++|+++++++++|+ |.++++++|||+++.+++++.++|++++++|+++++||...
T Consensus 279 GQ~C~a~~--rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 356 (490)
T 3ju8_A 279 GQRCTCAR--RLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP 356 (490)
T ss_dssp GCSTTSEE--EEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred CCCCcCCC--EEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 89999966 99999997 9999999999999999999 99999999999999999999999999999999999999765
Q ss_pred CCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
+..|+|++|||+. ++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 357 ~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN 435 (490)
T 3ju8_A 357 IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWN 435 (490)
T ss_dssp STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEES
T ss_pred CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEEC
Confidence 5579999999999 99999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 151 CYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 151 ~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
++.. ..+.+||||+|.||.+ ++++|++.|+|++..
T Consensus 436 ~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 436 KQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp SCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9875 4578999999999975 589999999988765
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=330.15 Aligned_cols=185 Identities=23% Similarity=0.417 Sum_probs=172.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +||..+.
T Consensus 791 GQ~C~A~~--rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~- 865 (1001)
T 3haz_A 791 GQRCSALR--LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP- 865 (1001)
T ss_dssp GCSTTCEE--EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC-
T ss_pred CCCCCCCc--eeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC-
Confidence 89999966 9999999999999999999999999999999999999999999999999999999988 88 8887643
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE----------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEEC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN----------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWAN 150 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~----------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN 150 (197)
.|+|+.|||+.+ +++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||
T Consensus 866 ~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN 943 (1001)
T 3haz_A 866 EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVN 943 (1001)
T ss_dssp SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEe
Confidence 699999999974 678899999999999999996 89999999999999999999999999999999999
Q ss_pred CCCC--CCCCCCcCCCCCCCCC-CcchHHHHHhcccccEEEEeCC
Q 038769 151 CYLA--FDNDCPYGGYKMSGFG-RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 151 ~~~~--~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+++. ..+.+||||+|.||+| +++|++++++|++.|+|+++..
T Consensus 944 ~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 944 RNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp SCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred CCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 9875 3468899999999999 5789999999999999998763
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=292.45 Aligned_cols=173 Identities=21% Similarity=0.255 Sum_probs=157.4
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |||||++ +||+|+++|+++++++++| +.+||++++.+.+++.++++ ++|+++++||..
T Consensus 320 GQ~C~a~~--rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-- 386 (528)
T 3v4c_A 320 GQFCTNPG--IAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-- 386 (528)
T ss_dssp GCCTTCCC--EEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC--
T ss_pred CCccccCc--EEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc--
Confidence 89999966 9999997 9999999999999999754 57899999988888877763 479999999974
Q ss_pred CCCceEecEEEecCCCC---CcccccceecceeEEEEEE--------ecCCCCcceeEEeeC--ChHHHHHHHhhcc--e
Q 038769 80 QKGYYIEPTIFTNVKED---MLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITN--DLNTANTVSRSIR--A 144 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~---~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~--d~~~~~~~~~~l~--~ 144 (197)
.|+|++|||+.+++++ |.+++||+||||++|++|+ +|+++|||+++|||+ |.+++.+++++++ +
T Consensus 387 -~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~a 465 (528)
T 3v4c_A 387 -SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKA 465 (528)
T ss_dssp -CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHE
T ss_pred -CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcC
Confidence 6999999999988877 8999999999999999998 999999999999999 8899999999998 9
Q ss_pred eEEEECCCCC---CCCCCCcCC-CCCCCCCCcc--hHHHHHhcccccEE
Q 038769 145 GIIWANCYLA---FDNDCPYGG-YKMSGFGRDC--GLDSLHKYLHVKSV 187 (197)
Q Consensus 145 G~v~iN~~~~---~~~~~pfGG-~~~SG~G~~~--g~~~~~~f~~~k~v 187 (197)
|+|+||++++ ..+.+|||| +|.||+|+++ |.+|+++|+++|++
T Consensus 466 G~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 466 GRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp EEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred cEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 9999999765 358999999 9999999986 99999999999875
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=283.02 Aligned_cols=172 Identities=16% Similarity=0.200 Sum_probs=156.3
Q ss_pred CceeeecCCCEEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcee
Q 038769 1 LRVCFTHQFPNIYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK-EGATVLTGGKTV 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~-v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~ 78 (197)
||.|++++ |||||++ ++|+|+++|+++++++++ ||++++.+.+++.++|+++++ +|+++++||.
T Consensus 286 GQ~C~a~~--rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-- 351 (510)
T 1ez0_A 286 GQFCTKPG--VVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-- 351 (510)
T ss_dssp GCCTTCCC--EEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--
T ss_pred CCCcCCCC--EEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--
Confidence 89999966 9999999 999999999999999973 689999999999999999984 7999999996
Q ss_pred CCCCceEecEEEecCCCC---CcccccceecceeEEEEEE--------ecCCCCcceeEEeeCCh--HHHHHHHhhc--c
Q 038769 79 GQKGYYIEPTIFTNVKED---MLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDL--NTANTVSRSI--R 143 (197)
Q Consensus 79 ~~~g~~~~Ptv~~~~~~~---~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~--~~~~~~~~~l--~ 143 (197)
.|+|++|||+.+++++ |.+++||+||||++|++|+ +|+++|||++||||+|. +++.++++++ +
T Consensus 352 --~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~ 429 (510)
T 1ez0_A 352 --ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEI 429 (510)
T ss_dssp --CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred --CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhc
Confidence 2899999999988777 9999999999999999999 99999999999999987 7999999999 7
Q ss_pred eeEEEECCCCC---CCCCCCcCC-CCCCCCCCc--chHHHHHhcccccEEE
Q 038769 144 AGIIWANCYLA---FDNDCPYGG-YKMSGFGRD--CGLDSLHKYLHVKSVV 188 (197)
Q Consensus 144 ~G~v~iN~~~~---~~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~k~v~ 188 (197)
+|+|+||++.. ..+.+|||| +|.||.|+. +|.+++++|++.|++.
T Consensus 430 aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 430 AGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred ccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 99999999764 357899999 799999754 7999999999988763
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=265.28 Aligned_cols=174 Identities=14% Similarity=0.144 Sum_probs=158.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHH-------hccccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEE
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~-------~~l~vG~p~-~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~ 72 (197)
||.|++++ |||||+++||+|+++|+++. +++++|+|. ++++++||+++.++++++.++++.++.+|++++
T Consensus 248 Gq~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl 325 (464)
T 3k9d_A 248 GTICASEQ--SVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVL 325 (464)
T ss_dssp GCSTTSCC--EEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEE
T ss_pred CCCCCCCc--EEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEE
Confidence 89999966 99999999999999999986 567889987 788999999999999999999999989999999
Q ss_pred eCCceeCCCCceEecEEEecCCCCCcccccceecceeEEEEEE------------ecCCCCcceeEEeeCChHHHHHHHh
Q 038769 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------------ANNRRYGLAAGIITNDLNTANTVSR 140 (197)
Q Consensus 73 ~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~------------~n~~~~gL~~~v~t~d~~~~~~~~~ 140 (197)
+||.. ++++++.+. +|+||||++|++|+ +|+++|||+++|||+|.+++.++++
T Consensus 326 ~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~ 390 (464)
T 3k9d_A 326 IAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFAL 390 (464)
T ss_dssp EEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHH
T ss_pred EcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHH
Confidence 98853 466778764 89999999999998 5999999999999999999999999
Q ss_pred hcceeEEEECCCCC---------CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 141 SIRAGIIWANCYLA---------FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 141 ~l~~G~v~iN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
++++|+|+||++.. ..+.+|||| +.+|.|.++|..+++.|++.|+|.....
T Consensus 391 ~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 391 KKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp HSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred hCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 99999999999864 468999998 7899999999999999999999987654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=259.10 Aligned_cols=156 Identities=11% Similarity=0.072 Sum_probs=109.4
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHHHHH-HHHHHHcCCEEEeCCc
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVNQGPQINKKQFDRILSY-IESGKKEGATVLTGGK 76 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~-i~~a~~~Ga~~~~gg~ 76 (197)
| .|++++ |||||+++ |+|+++|+++++++++ |+|.+ .++ |++++ ++++||+
T Consensus 268 G-~C~a~~--rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~ 322 (468)
T 1vlu_A 268 A-GCNAME--TLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE 322 (468)
T ss_dssp ---CCCCE--EEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH
T ss_pred C-cCCcCc--EEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC
Confidence 6 899966 99999999 9999999999999987 87643 344 56654 3566775
Q ss_pred eeCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEE
Q 038769 77 TVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIW 148 (197)
Q Consensus 77 ~~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 148 (197)
| +.||++ ++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 323 -----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 393 (468)
T 1vlu_A 323 -----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY 393 (468)
T ss_dssp -----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred -----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 4 689987 78899999999999999999999 999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcC-----CCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 149 ANCYLAFDNDCPYG-----GYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 149 iN~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
||++....+.+||| |+|.||+|++ |.+++++|++.|+|+++.
T Consensus 394 vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 394 WNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred EcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 99987767889999 9999999999 999999999999998764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-33 Score=242.96 Aligned_cols=148 Identities=16% Similarity=0.188 Sum_probs=123.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++| ||+ +++ ++++++++|++++.|+... .
T Consensus 277 GQ~C~a~~--rvlV~~~i~d-------------------------~p~-----~~~---~i~~~~~~Ga~v~~G~~~~-~ 320 (463)
T 2h5g_A 277 PAACNALE--TLLIHRDLLR-------------------------TPL-----FDQ---IIDMLRVEQVKIHAGPKFA-S 320 (463)
T ss_dssp TTSTTSEE--EEEEEGGGTT-------------------------SHH-----HHH---HHHHHHHTTCEEEECHHHH-C
T ss_pred CCccccCc--EEEEeccccc-------------------------hHH-----HHH---HHHHHHhCCCEEEeCCccc-c
Confidence 89999966 9999999998 343 333 5788889999998555422 2
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.++|+ +++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 321 ~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~ 392 (463)
T 2h5g_A 321 YLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNAS 392 (463)
T ss_dssp -----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSC
T ss_pred cCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 35443 5789999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCC--Cc--chHHHHHhcccccEEEEeCC
Q 038769 153 LAFDNDCPYGGYKMSGFG--RD--CGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~f~~~k~v~~~~~ 192 (197)
....+.+||||+|.||+| ++ +|.+++++|++.|+|+++..
T Consensus 393 ~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 393 TRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp GGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred ccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 766789999999999999 76 89999999999999988653
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-33 Score=240.90 Aligned_cols=148 Identities=20% Similarity=0.172 Sum_probs=125.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCce
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKT 77 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 77 (197)
| .|++++ |||||+++||+|+++|+++++++++ |+|. ..++|+++. +
T Consensus 277 G-~C~a~~--rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~-~---------- 325 (444)
T 4ghk_A 277 G-TCNTME--TLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG-V---------- 325 (444)
T ss_dssp ---CCCCC--EEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT-C----------
T ss_pred c-ccCcCc--eEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc-c----------
Confidence 6 899966 9999999999999999999999988 7653 135565542 1
Q ss_pred eCCCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 78 VGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 78 ~~~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
| ++ +++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 326 ----G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~v 393 (444)
T 4ghk_A 326 ----G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMV 393 (444)
T ss_dssp ----C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred ----C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEE
Confidence 2 12 24578999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCC----CcchHHHHHhcccccEEEEeC
Q 038769 150 NCYLAFDNDCPYGGYKMSGFG----RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 150 N~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~ 191 (197)
|+++...+.+||||.|.||+| +++|.+++++|++.|+|++..
T Consensus 394 N~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 394 NASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp EECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred cCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 998777788999999999987 688999999999999998765
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-33 Score=241.32 Aligned_cols=146 Identities=18% Similarity=0.241 Sum_probs=126.3
Q ss_pred eeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCCCC
Q 038769 3 VCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQKG 82 (197)
Q Consensus 3 ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g 82 (197)
.|++|+ |||||+++||+|+++|++++++++++ +.||... .+
T Consensus 266 ~C~a~~--rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~ 306 (427)
T 1o20_A 266 TCNAAE--KLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE 306 (427)
T ss_dssp STTSEE--EEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH
T ss_pred CCCCcc--EEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh
Confidence 899966 99999999999999999999998753 1122211 12
Q ss_pred ceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCCCC
Q 038769 83 YYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLA 154 (197)
Q Consensus 83 ~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~ 154 (197)
|+ |||. +.++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++..
T Consensus 307 -~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~ 381 (427)
T 1o20_A 307 -IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR 381 (427)
T ss_dssp -HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG
T ss_pred -hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc
Confidence 33 8862 4568899999999999999999 999999999999999999999999999999999999876
Q ss_pred CCCCCCcCCCCCCCCC----CcchHHHHHhcccccEEEEeCC
Q 038769 155 FDNDCPYGGYKMSGFG----RDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 155 ~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
..+.+||||.|.||+| +++|.+++++|++.|+|++...
T Consensus 382 ~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 382 FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 6788999999999997 4679999999999999988764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-30 Score=222.51 Aligned_cols=166 Identities=19% Similarity=0.256 Sum_probs=129.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcee--
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTV-- 78 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-- 78 (197)
||.|++++ |||||+++||+|+++|+++ +||++++.+++++.++|+++..+|+++ +|+...
T Consensus 243 GQ~C~a~~--rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~ 304 (452)
T 3my7_A 243 GVVCASEQ--AVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAI 304 (452)
T ss_dssp GCCTTCEE--EEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHH
T ss_pred CCccCCCc--EEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchh
Confidence 89999976 9999999999999999875 389999999999999998776677776 466532
Q ss_pred -CCCCceEecEE-------EecCCCCCcccccceecceeEEEEEE--------ecCCC----CcceeEEeeCChHHHHH-
Q 038769 79 -GQKGYYIEPTI-------FTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRR----YGLAAGIITNDLNTANT- 137 (197)
Q Consensus 79 -~~~g~~~~Ptv-------~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~----~gL~~~v~t~d~~~~~~- 137 (197)
...|+|++||+ +.++++++.+++ |+||||++|++|+ +|++. |||+++|||+|.+++.+
T Consensus 305 ~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i 383 (452)
T 3my7_A 305 AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRI 383 (452)
T ss_dssp HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHH
T ss_pred HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHH
Confidence 12589999997 667889999875 8999999999998 88875 99999999999888877
Q ss_pred --HHhhcceeEEEECCCCCCCCCCCcCCCCCC-----------CCC-----CcchHHHHHhcccccEEEEeC
Q 038769 138 --VSRSIRAGIIWANCYLAFDNDCPYGGYKMS-----------GFG-----RDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 138 --~~~~l~~G~v~iN~~~~~~~~~pfGG~~~S-----------G~G-----~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+++++++|+|+||++. +|||+|.. |.| ...+.-+.+++.+.|+|..+.
T Consensus 384 ~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 384 RYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp HHHHHHCCCSEEEESCCC------C----------------------------CCCCCGGGGEEEEEEECCC
T ss_pred HHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence 9999999999999964 35554432 222 223345677888888876544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 197 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-67 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-64 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-56 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-52 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-44 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 3e-44 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-36 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-35 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-13 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-13 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 212 bits (540), Expect = 2e-67
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 10/192 (5%)
Query: 13 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVL 72
+VQE IYDEF ++ V +AK+ VVG+PFD QGPQ+++ QF +IL YI +GK+EGA +L
Sbjct: 303 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 362
Query: 73 TGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLA 124
GG +GY+I+PT+F +V++ M IAK+EIFGPVM ++KF ANN YGLA
Sbjct: 363 CGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLA 422
Query: 125 AGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHV 184
A + T DL+ AN +S++++AG +W NCY F P+GGYKMSG GR+ G L Y V
Sbjct: 423 AAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 482
Query: 185 KSVV--TPIHNS 194
K+V P NS
Sbjct: 483 KTVTVKVPQKNS 494
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 204 bits (519), Expect = 2e-64
Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 8/193 (4%)
Query: 4 CFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIES 63
++V+E IYDEF ++ VE+AK +V+G+P P V+QGPQI+K+Q+++IL IES
Sbjct: 294 QCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIES 353
Query: 64 GKKEGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------- 115
GKKEGA + GG G KGY+I+PT+F++V +DM IAK+EIFGPV +MKF
Sbjct: 354 GKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKR 413
Query: 116 ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGL 175
ANN YGL+AGI TND++ A TVS ++++G +W NCY CP+GG+KMSG GR+ G
Sbjct: 414 ANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGE 473
Query: 176 DSLHKYLHVKSVV 188
H+Y VK+V
Sbjct: 474 YGFHEYTEVKTVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 184 bits (467), Expect = 1e-56
Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 14/193 (7%)
Query: 10 PNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGA 69
++VQ I +F +++V++ KA VVGDP G I+K Q D++L ++ KKEGA
Sbjct: 301 TRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGA 360
Query: 70 TVLTGGKTVG------QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN-------- 115
VL GG+ + + GY++ P + N ++DM K+EIFGPVM ++ F+
Sbjct: 361 RVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQR 420
Query: 116 ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCGL 175
ANN +GLA+G+ T D++ A+ V+ ++ AG + N Y + P+GGYKMSGFGR+ G
Sbjct: 421 ANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQ 480
Query: 176 DSLHKYLHVKSVV 188
++ Y +K+V+
Sbjct: 481 ATVDYYSQLKTVI 493
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 174 bits (441), Expect = 1e-52
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 7 HQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKK 66
+ + +G Y+ ++++++A+ VG P + + GP ++ +Q ++LSYIE GK
Sbjct: 323 SAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKN 381
Query: 67 EGATVLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANN 118
EG VL GGK + +GY+I PT+FT V IA++EIFGPV+ +++ AN+
Sbjct: 382 EGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVAND 440
Query: 119 RRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYL--AFDNDCPYGGYKMSGFGRDCG-L 175
YGL G+ + R G ++ N + A P+GG+K+SG G L
Sbjct: 441 TPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGAL 500
Query: 176 DSLHKYLHVKSV 187
D L +L +K+V
Sbjct: 501 DYLRLFLEMKAV 512
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 151 bits (382), Expect = 2e-44
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 4 CFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIES 63
+ + +Y + +++ ++ + VGDP DP V+ GP I+ D +++ IE
Sbjct: 293 QRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIED 352
Query: 64 GKKEGATVLTGGKTVGQKGYYIEP-TIFTNVKEDMLIAKDEIFGPVMVLMKFN------- 115
++G VL GG+ +G + +DM++ K E+F PV ++
Sbjct: 353 AVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIE 412
Query: 116 -ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFD-NDCPYGGYKMSGFGRDC 173
AN R YGL A + D+ R + G I+ N P+GG K SG R+
Sbjct: 413 LANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 472
Query: 174 GLDSLHKYLHVKSVV 188
++ K++V
Sbjct: 473 IGYAVEAVTAYKTIV 487
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 151 bits (381), Expect = 3e-44
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 4 CFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIES 63
IY Q+GIYD +KL G P D + GP + +R+ +E
Sbjct: 278 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 337
Query: 64 GKKEGAT-VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN------- 115
K G V+TGG+ GYY PT+ +D I + E+FGPV+ + F+
Sbjct: 338 AKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 397
Query: 116 -ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRDCG 174
AN+ +YGLA+ + T D+ A+ VS ++ G W N + ++ P+GG K+SG+G+D
Sbjct: 398 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMS 457
Query: 175 LDSLHKYLHVKSVV 188
L L Y V+ V+
Sbjct: 458 LYGLEDYTVVRHVM 471
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (324), Expect = 3e-36
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 16/166 (9%)
Query: 33 WVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQKGYYIEPTIFTN 92
G+ + + G IN + F R+ I++ K YI PTI +
Sbjct: 268 DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQS------SRYIAPTILVD 321
Query: 93 VKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRA 144
V + ++EIFGPVM ++ N R LA + +N+ + +
Sbjct: 322 VDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSS 381
Query: 145 GIIWANCYL--AFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVV 188
G + AN + P+GG SG G G S + H +S +
Sbjct: 382 GGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 127 bits (320), Expect = 2e-35
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 11 NIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT 70
+ V E + DE +K+ EK A +G+P D + P I+ K D + I +GAT
Sbjct: 288 RVLVMESVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGAT 346
Query: 71 VLTGGKTVGQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYG 122
LT K ++G I P +F V DM +A +E FGPV+ +++ +N YG
Sbjct: 347 ALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYG 403
Query: 123 LAAGIITNDLNTANTVSRSIRAGIIWANCYLAFDND-CPYGGYKMSGFGRDCGLDSLHKY 181
L A I TND A ++ + G + N D P+ G K SG G S+
Sbjct: 404 LQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAM 463
Query: 182 LHVKSVV 188
VKSVV
Sbjct: 464 TTVKSVV 470
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 66.2 bits (160), Expect = 1e-13
Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 15/122 (12%)
Query: 79 GQKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITN 130
+K I P + ++D E ++ + G + I+T
Sbjct: 288 CEKTREIVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTE 344
Query: 131 DLNTANTVSRSIRAGIIWANCYLAFDNDCPYGGYKMSGFGRD----CGLDSLHKYLHVKS 186
+ + A I A ++ N F + +G G G L + K
Sbjct: 345 NYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKF 404
Query: 187 VV 188
VV
Sbjct: 405 VV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 64.7 bits (156), Expect = 4e-13
Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 20/119 (16%)
Query: 83 YYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITN--DL 132
+ ++EIFGP +++ + L A I D
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412
Query: 133 NTANTVSRSIR--AGIIWANCY-------LAFDNDCPYGGYKMSGFGRDCGLDSLHKYL 182
+ + + AG + N + A + PY S G +++H++L
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIHRWL 470
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 197 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 99.96 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 99.94 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 99.6 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.5e-51 Score=361.41 Aligned_cols=192 Identities=51% Similarity=0.963 Sum_probs=185.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++||++++||...+.
T Consensus 293 GQ~C~a~~--rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 370 (494)
T d1bxsa_ 293 GQCCIAAS--RLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN 370 (494)
T ss_dssp TCCTTCCC--EEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS
T ss_pred Ccccccce--EEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 371 ~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~ 450 (494)
T d1bxsa_ 371 KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY 450 (494)
T ss_dssp SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCC
T ss_pred CceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCC
Confidence 89999999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNS 194 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~ 194 (197)
....+.+||||+|.||+|+++|.+|+++|++.|+|+++++++
T Consensus 451 ~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~~~~ 492 (494)
T d1bxsa_ 451 SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQK 492 (494)
T ss_dssp CCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred CCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEecCCC
Confidence 877789999999999999999999999999999999999764
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.1e-50 Score=355.83 Aligned_cols=192 Identities=48% Similarity=0.899 Sum_probs=185.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||....+
T Consensus 293 GQ~C~a~~--~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~ 370 (494)
T d1o04a_ 293 GQCSCAGS--RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 370 (494)
T ss_dssp GCCTTCEE--EEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS
T ss_pred cccccccc--cccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC
Confidence 89999966 9999999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 371 ~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~ 450 (494)
T d1o04a_ 371 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY 450 (494)
T ss_dssp SSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCS
T ss_pred CCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCC
Confidence 89999999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCCC
Q 038769 153 LAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHNS 194 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~ 194 (197)
....+.+||||+|.||+|+++|.+++++|++.|+|+++++.+
T Consensus 451 ~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~p~k 492 (494)
T d1o04a_ 451 DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQK 492 (494)
T ss_dssp SCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECSCC
T ss_pred CCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeCCCC
Confidence 877789999999999999999999999999999999998754
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.9e-49 Score=345.19 Aligned_cols=189 Identities=33% Similarity=0.599 Sum_probs=180.3
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE-EEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGAT-VLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~-~~~gg~~~~ 79 (197)
||.|++++ |+|||+++||+|+++|+++++++++|+|.++++.+||++++.+.+++.+++++++++|+. ++.|+....
T Consensus 277 GQ~C~a~~--rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~ 354 (474)
T d1wnda_ 277 GQDCTAAC--RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK 354 (474)
T ss_dssp GCSTTCCC--EEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS
T ss_pred Cccccccc--ccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccC
Confidence 89999966 999999999999999999999999999999999999999999999999999999999984 666666655
Q ss_pred CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECC
Q 038769 80 QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANC 151 (197)
Q Consensus 80 ~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~ 151 (197)
..|+|+.|||+.++++++.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+
T Consensus 355 ~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~ 434 (474)
T d1wnda_ 355 GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNT 434 (474)
T ss_dssp SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESC
T ss_pred CCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeC
Confidence 689999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 152 YLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 152 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
+....+.+||||+|.||+|+++|.+|+++|++.|+|++++
T Consensus 435 ~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 435 HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp CCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 9877889999999999999999999999999999999874
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4.3e-49 Score=346.34 Aligned_cols=195 Identities=38% Similarity=0.746 Sum_probs=184.7
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC-
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG- 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~- 79 (197)
||.|++++ |+|||++++++|+++++++++++++|+|.++.+++||++++.+++++++++++++++||++++||....
T Consensus 294 GQ~C~a~~--ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~ 371 (503)
T d1a4sa_ 294 GQVCTNGT--RVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTP 371 (503)
T ss_dssp GCCTTCCC--EEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCC
T ss_pred CCccccCc--ceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCC
Confidence 89999955 999999999999999999999999999999999999999999999999999999999999999997531
Q ss_pred -----CCCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeE
Q 038769 80 -----QKGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGI 146 (197)
Q Consensus 80 -----~~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~ 146 (197)
..|+|++|||+.+++++|.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+
T Consensus 372 ~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~ 451 (503)
T d1a4sa_ 372 SDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451 (503)
T ss_dssp SSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSE
T ss_pred CCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeE
Confidence 368999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC-CCCC
Q 038769 147 IWANCYLAFDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN-SPWL 197 (197)
Q Consensus 147 v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~-~~~~ 197 (197)
|+||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.+ +.||
T Consensus 452 v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 452 CYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp EEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSCCCCCC
T ss_pred EEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCCCCCCCC
Confidence 99999887778999999999999999999999999999999999874 3444
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.9e-47 Score=334.12 Aligned_cols=187 Identities=33% Similarity=0.632 Sum_probs=173.2
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |+|||++++|+|+++++++++++++| |.++++++||++++.+++++.++|++|+++|+.+ ++|...+.
T Consensus 319 GQ~C~a~~--ri~v~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~ 394 (516)
T d1uzba_ 319 GQKCSAAS--RLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEG 394 (516)
T ss_dssp GCSTTCEE--EEEEEHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSS
T ss_pred CCcccccC--ccccccccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCC
Confidence 89999966 99999999999999999999999999 5678899999999999999999999999999655 56665555
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+.++++++.+++||+||||++|++|+ +|+++|||++||||+|.+++.++++++++|+|+||++
T Consensus 395 ~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~ 474 (516)
T d1uzba_ 395 EGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRK 474 (516)
T ss_dssp SSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSC
T ss_pred CCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCC
Confidence 79999999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred CC--CCCCCCcCCCCCCCCCCcch-HHHHHhcccccEEEEeC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCG-LDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g-~~~~~~f~~~k~v~~~~ 191 (197)
.+ ..+.+||||+|.||+|+++| .+++++|++.|+|+.+|
T Consensus 475 ~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 475 ITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred CCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEcC
Confidence 65 35789999999999998865 89999999999998764
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.2e-46 Score=328.76 Aligned_cols=192 Identities=28% Similarity=0.485 Sum_probs=176.0
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++|+ |+|||++++|+|+++|+++++++++|+|.|+++++|||+++.++++++++|++|+++||+++.|+....
T Consensus 292 GQ~C~a~~--~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~- 368 (499)
T d1ky8a_ 292 GQRCDAIK--LVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG- 368 (499)
T ss_dssp GCCTTCEE--EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE-
T ss_pred cccccccc--cccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc-
Confidence 89999976 999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CCceEecEEE---ecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEE
Q 038769 81 KGYYIEPTIF---TNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWA 149 (197)
Q Consensus 81 ~g~~~~Ptv~---~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~i 149 (197)
..+..++++ .++.+||.+++||+||||++|++|+ +|+++|||++||||+|.++++++++++++|+|+|
T Consensus 369 -~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~i 447 (499)
T d1ky8a_ 369 -PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYI 447 (499)
T ss_dssp -TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEE
T ss_pred -ccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEE
Confidence 334444444 3456789999999999999999998 9999999999999999999999999999999999
Q ss_pred CCCCC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCCC-CCC
Q 038769 150 NCYLA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIHN-SPW 196 (197)
Q Consensus 150 N~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~-~~~ 196 (197)
|+++. ..+.+||||+|.||+|+++|.+++++|++.|+|++++++ ..|
T Consensus 448 N~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 448 NDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp TSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSC
T ss_pred eCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcCCCCCCC
Confidence 99876 347899999999999999999999999999999999874 455
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3e-44 Score=311.28 Aligned_cols=183 Identities=26% Similarity=0.410 Sum_probs=167.6
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|+++|+++++.+ +|+|.++++++||++++.+++++..+++++ +...|+... .
T Consensus 239 GQ~C~a~~--rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~~-~ 309 (446)
T d1ad3a_ 239 GQTCVAPD--YILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTWD-Q 309 (446)
T ss_dssp TCCTTSCC--EEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCEE-T
T ss_pred CCccccCC--ccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceeec-C
Confidence 89999966 99999999999999999999988 899999999999999999999998776543 445455443 3
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.++|+.|||+.+++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|+|+||+.
T Consensus 310 ~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 389 (446)
T d1ad3a_ 310 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDV 389 (446)
T ss_dssp TTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSS
T ss_pred CCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCC
Confidence 78899999999999999999999999999999999 9999999999999999999999999999999999997
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeCC
Q 038769 153 LA--FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPIH 192 (197)
Q Consensus 153 ~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 192 (197)
+. ..+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus 390 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~ 431 (446)
T d1ad3a_ 390 IVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSL 431 (446)
T ss_dssp SGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCC
T ss_pred ccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEccC
Confidence 64 55899999999999999999999999999999998754
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=3e-40 Score=287.53 Aligned_cols=185 Identities=34% Similarity=0.474 Sum_probs=172.5
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |||||++++|+|++.++++...+++|++.+.. +++|+++..+.+++.+.+.++...++..+.....
T Consensus 280 Gq~C~a~~--~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 353 (474)
T d1euha_ 280 GQRCTAVK--RVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353 (474)
T ss_dssp GCCSSSEE--EEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---
T ss_pred CCcccccc--ccchhhhhhhhhhHhhhhhhhhccccCccccc-ccccccchHHHHHHHHHHHhhhcccccccccCCC---
Confidence 89999966 99999999999999999999999999988654 5899999999999999999999988877765543
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.|+|++|||+..++++|.+++||+||||++|++|+ +|+++|||+++|||+|.+.++++++++++|+|+||++
T Consensus 354 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~ 433 (474)
T d1euha_ 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK 433 (474)
T ss_dssp ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSC
T ss_pred CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECC
Confidence 68999999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CC-CCCCCCcCCCCCCCCCCcchHHHHHhcccccEEEEeC
Q 038769 153 LA-FDNDCPYGGYKMSGFGRDCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~-~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 191 (197)
.. ..+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 434 ~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 434 TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473 (474)
T ss_dssp CCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEec
Confidence 65 4578999999999999999999999999999999875
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=99.96 E-value=3.9e-30 Score=225.19 Aligned_cols=171 Identities=16% Similarity=0.240 Sum_probs=133.5
Q ss_pred CceeeecCCCEEEEeCccH-HHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeC
Q 038769 1 LRVCFTHQFPNIYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVG 79 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~-d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 79 (197)
||.|++++ |+||+++.+ +.|++.+++.++.. ++++.+||++++.+++++ ++.+.++++++..++..
T Consensus 282 GQ~C~a~~--rv~v~~~~~~~~~~~~~~~~~~~~------~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~-- 348 (504)
T d1ez0a_ 282 GQFCTKPG--VVFALNTPETQAFIETAQSLIRQQ------SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE-- 348 (504)
T ss_dssp GCCTTCCC--EEEEESSHHHHHHHHHHHHHHHHC------CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--
T ss_pred Cccccccc--cccchhhhhHHHHhhhhhhhhhhc------ccccccccchhhhhhhhh---hhhhhhhhhhccccccc--
Confidence 89999966 999988866 56777777666543 356789999999888776 56677788888887753
Q ss_pred CCCceEecEEEe---cCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeC--ChHHHHHHHhhcc--e
Q 038769 80 QKGYYIEPTIFT---NVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITN--DLNTANTVSRSIR--A 144 (197)
Q Consensus 80 ~~g~~~~Ptv~~---~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~--d~~~~~~~~~~l~--~ 144 (197)
+.+..|+++. ++..++.+++||+||||++|++|+ +|+++|||+++|||+ |..++.+++++|+ +
T Consensus 349 --~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~a 426 (504)
T d1ez0a_ 349 --SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIA 426 (504)
T ss_dssp --TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTE
T ss_pred --ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCc
Confidence 3344555543 334467899999999999999998 999999999999996 4458999999997 8
Q ss_pred eEEEECCCCC---CCC----CCCcCCCCCCCCCCcchHHHHHhcccccEE
Q 038769 145 GIIWANCYLA---FDN----DCPYGGYKMSGFGRDCGLDSLHKYLHVKSV 187 (197)
Q Consensus 145 G~v~iN~~~~---~~~----~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v 187 (197)
|+|+||++++ ... ..||||.+.||.+ ..|.+++++|+++.++
T Consensus 427 G~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 427 GRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVAY 475 (504)
T ss_dssp EEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEEE
T ss_pred cEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhhh
Confidence 9999999754 222 3477777888854 4689999999876543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.94 E-value=1.3e-28 Score=210.49 Aligned_cols=147 Identities=18% Similarity=0.162 Sum_probs=113.8
Q ss_pred CceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCC
Q 038769 1 LRVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQ 80 (197)
Q Consensus 1 GQ~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 80 (197)
||.|++++ |+|||+++||+|+++|.+...+..++++.++.. . ..
T Consensus 251 gq~C~a~~--r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~--------------~----~~---------------- 294 (414)
T d1o20a_ 251 PGTCNAAE--KLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT--------------R----EI---------------- 294 (414)
T ss_dssp TTSTTSEE--EEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH--------------H----HH----------------
T ss_pred Cccccccc--ccchhHHHHHHHHHHHhHHHHHcCCccccchhh--------------h----hh----------------
Confidence 89999955 999999999999999999998876655432110 0 00
Q ss_pred CCceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCC
Q 038769 81 KGYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCY 152 (197)
Q Consensus 81 ~g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~ 152 (197)
.+.+.. .....+++|+||||++|++|+ +|+++|||+++|||+|.+++.++++++++|.|+||++
T Consensus 295 -----~~~~~~---~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~ 366 (414)
T d1o20a_ 295 -----VPDVVP---ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNAS 366 (414)
T ss_dssp -----STTSEE---CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSC
T ss_pred -----ccccee---cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 001111 112346899999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCcCCCCCCCC--CCcc--hHHHHHhcccccEEEEeC
Q 038769 153 LAFDNDCPYGGYKMSGF--GRDC--GLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 153 ~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~f~~~k~v~~~~ 191 (197)
+......|||+.+.||. ++.+ |++|+++|++.|+|+++.
T Consensus 367 ~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 367 TRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp GGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 65444455555555554 4443 899999999999997764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.60 E-value=2.6e-16 Score=134.54 Aligned_cols=160 Identities=13% Similarity=0.068 Sum_probs=90.2
Q ss_pred ceeeecCCCEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCceeCCC
Q 038769 2 RVCFTHQFPNIYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVNQGPQINKKQFDRILSYIESGKKEGATVLTGGKTVGQK 81 (197)
Q Consensus 2 Q~C~ap~~~rv~V~~~v~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~ 81 (197)
+.|++ .++++||+++++.|...+....+.-. .+. .++...... .+...+. +.. .
T Consensus 257 g~C~a--~e~llV~e~ia~~~~~~~~~~~~~gv---------~l~--~~~~~~~~~----~~~~~~~------~~~---~ 310 (436)
T d1vlua_ 257 AGCNA--METLLINPKFSKWWEVLENLTLEGGV---------TIH--ATKDLKTAY----FDKLNEL------GKL---T 310 (436)
T ss_dssp --CCC--CEEEEECTTSTTHHHHHHHHHHHHCC---------CBE--ECHHHHHHH----HHHHHHH------TCC---C
T ss_pred Ccccc--ccceeecHhhhhhhhhhHHHHHhCCc---------EEE--eCHHHHHHh----hhhhhhc------ccc---c
Confidence 35888 55999999999888665554444310 010 122222221 1111111 110 1
Q ss_pred CceEecEEEecCCCCCcccccceecceeEEEEEE--------ecCCCCcceeEEeeCChHHHHHHHhhcceeEEEECCCC
Q 038769 82 GYYIEPTIFTNVKEDMLIAKDEIFGPVMVLMKFN--------ANNRRYGLAAGIITNDLNTANTVSRSIRAGIIWANCYL 153 (197)
Q Consensus 82 g~~~~Ptv~~~~~~~~~~~~eE~FGPvl~v~~~~--------~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 153 (197)
.....|++...... -|.+|.|+|+++|++++ +|...+|||++|||+|.+.+.+|++++++|.|+||.++
T Consensus 311 ~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasT 387 (436)
T d1vlua_ 311 EAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAST 387 (436)
T ss_dssp HHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCG
T ss_pred ccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCC
Confidence 22223333322222 26899999999999999 99999999999999999999999999999999999998
Q ss_pred CCCCCCCcC--CC-CCCCCCC--cchHHHHHhcccccEEEEeC
Q 038769 154 AFDNDCPYG--GY-KMSGFGR--DCGLDSLHKYLHVKSVVTPI 191 (197)
Q Consensus 154 ~~~~~~pfG--G~-~~SG~G~--~~g~~~~~~f~~~k~v~~~~ 191 (197)
.+.+..+|| +. |-| +++ ..|+.|++..|..|.+..-.
T Consensus 388 rf~Dg~~~g~g~e~Gis-t~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 388 RFADGFRYGFGAEVGIS-TSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp GGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred ccCCCCcccCcceeeEe-cCCCCCCCCcChHHhceEEEEEECC
Confidence 766666665 21 222 233 35889999999999886543
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