BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038771
         (242 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS
          PE=2 SV=1
          Length = 151

 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 12/82 (14%)

Query: 1  MEGLK--TFHLFALLLATLSVISVNGQLTTPCTTSMISSFTPCLNFITGSTSNGVTTPTQ 58
          M G+K  +F++  LL+A  S + +NGQ     + S ++   PCLN++     NG     Q
Sbjct: 2  MMGMKFFSFYVVLLLVAASSGMRINGQ-----SVSCLNQLAPCLNYL-----NGTKEVPQ 51

Query: 59 NCCDSLKSLMSTSMDCACLVIT 80
           CC+ LKS++  + +C C +I+
Sbjct: 52 VCCNPLKSVIRNNPECLCRMIS 73


>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080
           OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1
          Length = 182

 Score = 42.0 bits (97), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 32  TSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSMDCACLVITANVPLQLPINR 91
           +++I +   CL+F+  S+   V  P   CC  LK+++     C C    ++  L + +N 
Sbjct: 44  STLILNMADCLSFV--SSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNI 101

Query: 92  TLSLSLPRACNMGGVPVQ-CKASGTPLPAPGCLP 124
           T + +LP AC +    +  C  S  P  APG  P
Sbjct: 102 TKASTLPAACKLHAPSIATCGLSVAPSTAPGLAP 135


>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820
           OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
          Length = 169

 Score = 41.6 bits (96), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 10  FALLLATLSVISV----NGQLTTPCTTSMISSFTPCLNFIT-GSTSNGVTTPTQNCCDSL 64
           +A +L   SV+++           C+ S+I +   CL+F+T GST   V  P   CC  L
Sbjct: 3   YATILMIFSVVALMSGERAHAAVDCS-SLILNMADCLSFVTSGST---VVKPEGTCCSGL 58

Query: 65  KSLMSTSMDCACLVITANVPLQLPINRTLSLSLPRACNMGGVP-VQCKASGT---PLPAP 120
           K+++ T  +C C     +  L L ++ + + SLP  C +   P  +C  S +   P  AP
Sbjct: 59  KTVVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAP 118

Query: 121 GCLPSFGTN 129
           G  P+ G  
Sbjct: 119 GLSPTAGAG 127


>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
           japonica GN=LTPL1 PE=1 SV=1
          Length = 178

 Score = 35.0 bits (79), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 41  CLNFIT-GSTSNGVTTPTQNCCDSLKSLM--STSMDCACLVITANVPLQLPINRTLSLSL 97
           CL+++T G T+   + P++ CC  +K  +  S ++ C C   T+   L LPIN T +L L
Sbjct: 50  CLDYVTPGKTAP--SRPSKLCCGEVKGALKDSAAVGCLCAAFTSKT-LPLPINITRALHL 106

Query: 98  PRACN 102
           P AC 
Sbjct: 107 PAACG 111


>sp|O24493|MC1_PINRA Male-cone protein 1 OS=Pinus radiata PE=2 SV=1
          Length = 92

 Score = 35.0 bits (79), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 12/81 (14%)

Query: 5  KTFHLFALLLATLSVISVNGQLTTPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSL 64
          K+  LFA+LL   +V + +      C+ +M     PC + + G +SNGV  P+  CCD+L
Sbjct: 9  KSAALFAILLIVAAVQAED------CSNAM-DKLAPCTSAV-GLSSNGVK-PSSECCDAL 59

Query: 65 KSLMSTSMDCACLVITANVPL 85
          K    TS  C C  + A + L
Sbjct: 60 K---GTSTSCVCKSVRAVISL 77


>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis
           thaliana GN=At1g27950 PE=1 SV=1
          Length = 193

 Score = 34.3 bits (77), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 36  SSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSMDCACLVI----TANVPLQ-LPIN 90
              T CL+F TG      T P++ CCD+++ +      C C VI    T    L+ L + 
Sbjct: 40  QKVTLCLDFATGK----ATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQ 95

Query: 91  RTLSLSLPRACNMGGVPV 108
               + LP +C +    +
Sbjct: 96  EDKLIQLPTSCQLHNASI 113


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,126,036
Number of Sequences: 539616
Number of extensions: 4190120
Number of successful extensions: 38661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 1253
Number of HSP's that attempted gapping in prelim test: 26840
Number of HSP's gapped (non-prelim): 8353
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)