Query 038771
Match_columns 242
No_of_seqs 172 out of 904
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 04:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.4 2E-14 6.9E-19 111.1 1.3 79 28-112 2-90 (93)
2 1afh_A Maize nonspecific lipid 99.4 1.9E-14 6.3E-19 110.7 0.1 72 28-106 2-80 (93)
3 2alg_A Non-specific lipid tran 99.4 9.5E-15 3.3E-19 112.1 -1.6 72 28-107 2-80 (92)
4 2rkn_A DIR1 protein, AT5G48485 99.4 1.9E-14 6.5E-19 106.8 -1.5 73 28-107 3-75 (77)
5 1bwo_A NS-LTP1, nonspecific li 99.4 1.1E-13 3.6E-18 106.0 1.8 70 29-106 2-78 (90)
6 1siy_A LTP 1, NS-LTP1, nonspec 99.4 1.1E-13 3.9E-18 105.9 1.2 70 29-106 2-78 (91)
7 1t12_A LTP 1, nonspecific lipi 99.4 3.9E-14 1.3E-18 108.8 -1.5 70 28-106 2-78 (91)
8 1n89_A Lipid transfer protein; 99.3 1.4E-13 4.9E-18 100.2 0.6 64 30-106 2-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.3 1.4E-13 4.7E-18 100.8 0.0 68 29-111 2-69 (69)
10 1hyp_A Hydrophobic protein fro 92.0 0.033 1.1E-06 42.1 0.4 67 37-112 10-79 (80)
11 3ob4_A Conglutin, maltose ABC 67.8 0.27 9.1E-06 45.8 -4.2 53 58-112 429-490 (500)
12 1s6d_A Albumin 8; all helix, f 47.5 8 0.00027 29.7 1.8 80 27-111 8-102 (103)
13 1pnb_B Napin BNIB; napin IA an 41.5 2.5 8.6E-05 30.7 -1.9 54 55-112 9-72 (75)
14 1sm7_A Recombinant IB pronapin 28.6 3.8 0.00013 31.5 -2.9 71 38-112 15-106 (109)
15 1w2q_A Conglutin, ARA H 6; all 25.9 12 0.00041 29.9 -0.5 84 27-112 13-119 (127)
16 1bea_A Bifunctional amylase/se 22.5 26 0.00087 28.1 0.9 73 37-112 16-117 (127)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.43 E-value=2e-14 Score=111.14 Aligned_cols=79 Identities=24% Similarity=0.627 Sum_probs=60.6
Q ss_pred CCChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCCC-----CceeeeeccCCCCCCCCChHHHhhhcccCc
Q 038771 28 TPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSM-----DCACLVITANVPLQLPINRTLSLSLPRACN 102 (242)
Q Consensus 28 ~~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a~-----~CLC~~~~a~~~~~~~IN~trAl~LP~aCG 102 (242)
.+|.+ ++..|.||++|++++ ..|+..||+++|+|++... .|+|.-+.+......+||.++|.+||++||
T Consensus 2 isC~~-v~~~L~pCl~Yv~g~-----~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~Cg 75 (93)
T 2ljo_A 2 ISCGA-VTSDLSPCLTYLTGG-----PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCG 75 (93)
T ss_dssp CSSHH-HHHHHHHHHHHHTTS-----SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHT
T ss_pred CCHHH-HHHHHHhHHHHHcCC-----CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcC
Confidence 57998 778999999999985 4699999999999987653 244444433221234799999999999999
Q ss_pred CCCC----cC-CCCC
Q 038771 103 MGGV----PV-QCKA 112 (242)
Q Consensus 103 v~~p----P~-~C~~ 112 (242)
++.+ +. +|+.
T Consensus 76 V~~p~~Is~~~dC~~ 90 (93)
T 2ljo_A 76 VNIPYKISTTTNCNT 90 (93)
T ss_dssp CCCSSCCSTTCCGGG
T ss_pred CCCCCCCCCCCCCCC
Confidence 9887 33 7765
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.41 E-value=1.9e-14 Score=110.72 Aligned_cols=72 Identities=26% Similarity=0.664 Sum_probs=59.9
Q ss_pred CCChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-------CCceeeeeccCCCCCCCCChHHHhhhccc
Q 038771 28 TPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-------MDCACLVITANVPLQLPINRTLSLSLPRA 100 (242)
Q Consensus 28 ~~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-------~~CLC~~~~a~~~~~~~IN~trAl~LP~a 100 (242)
.+|++ +...|.||++|++++ + ..|++.||++||++++.. ..|+|++..... ++ +||.++|++||++
T Consensus 2 ~~C~~-v~~~L~pCl~y~~~~---~-~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~-~~-~in~~~A~~LP~~ 74 (93)
T 1afh_A 2 ISCGQ-VASAIAPCISYARGQ---G-SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VS-GLNAGNAASIPSK 74 (93)
T ss_dssp CSSHH-HHHHHGGGHHHHTTS---C-CSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTT-ST-TCCHHHHHHHHHH
T ss_pred CChHH-HHHhccCcHHHHcCC---C-CCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccc-cc-CcCHHHHHHHHHH
Confidence 57998 677999999999986 2 679999999999997432 359999876544 55 8999999999999
Q ss_pred CcCCCC
Q 038771 101 CNMGGV 106 (242)
Q Consensus 101 CGv~~p 106 (242)
||++.+
T Consensus 75 C~v~~p 80 (93)
T 1afh_A 75 CGVSIP 80 (93)
T ss_dssp HHCCCS
T ss_pred cCCCCC
Confidence 999875
No 3
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.41 E-value=9.5e-15 Score=112.14 Aligned_cols=72 Identities=21% Similarity=0.566 Sum_probs=59.2
Q ss_pred CCChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-------CCceeeeeccCCCCCCCCChHHHhhhccc
Q 038771 28 TPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-------MDCACLVITANVPLQLPINRTLSLSLPRA 100 (242)
Q Consensus 28 ~~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-------~~CLC~~~~a~~~~~~~IN~trAl~LP~a 100 (242)
.+|+. +...|.||++|++++ ..|+++||++||++++.+ ..|+|++..... ++ +||.++|++||++
T Consensus 2 ~~C~~-v~~~L~pCl~y~~~~-----~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~-~~-~in~~~A~~LP~~ 73 (92)
T 2alg_A 2 ITCGQ-VSSSLAPCIPYVRGG-----GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSAS-VP-GVNPNNAAALPGK 73 (92)
T ss_dssp CCHHH-HHHHHGGGHHHHHHC-----SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH-ST-TCCHHHHHHHHHH
T ss_pred CChHH-HHHhccCcHHHHcCC-----CCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccc-cC-ccChHHHHHHHHH
Confidence 46888 667999999999986 458899999999997432 469999875543 55 8999999999999
Q ss_pred CcCCCCc
Q 038771 101 CNMGGVP 107 (242)
Q Consensus 101 CGv~~pP 107 (242)
||++++.
T Consensus 74 Cgv~~p~ 80 (92)
T 2alg_A 74 CGVSIPY 80 (92)
T ss_dssp TTCCCSS
T ss_pred cCCCCCC
Confidence 9998753
No 4
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.38 E-value=1.9e-14 Score=106.81 Aligned_cols=73 Identities=21% Similarity=0.523 Sum_probs=58.6
Q ss_pred CCChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCCCCceeeeeccCCCCCCCCChHHHhhhcccCcCCCCc
Q 038771 28 TPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSMDCACLVITANVPLQLPINRTLSLSLPRACNMGGVP 107 (242)
Q Consensus 28 ~~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a~~CLC~~~~a~~~~~~~IN~trAl~LP~aCGv~~pP 107 (242)
.+|++ +...|++|++|++++. . ..|+.+||++||+ .+..|||.+++++....++||.++|++||++||+++++
T Consensus 3 ~~C~~-~~~~L~pC~~yv~~~~--~-~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 3 DLCGM-SQDELNECKPAVSKEN--P-TSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CBTTB-CHHHHHHHGGGGBSSS--C-CCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred chHHh-HHHhHhhCHHHHcCCC--C-CCCCHHHHHHHHh---cCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCC
Confidence 57988 5668999999999741 3 6799999999997 34689999998532123469999999999999998764
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.37 E-value=1.1e-13 Score=106.00 Aligned_cols=70 Identities=29% Similarity=0.637 Sum_probs=57.5
Q ss_pred CChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-------CCceeeeeccCCCCCCCCChHHHhhhcccC
Q 038771 29 PCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-------MDCACLVITANVPLQLPINRTLSLSLPRAC 101 (242)
Q Consensus 29 ~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-------~~CLC~~~~a~~~~~~~IN~trAl~LP~aC 101 (242)
+|++ +...|.||++|++++ + . |+.+||++||++++.+ ..|+|++..... ++ +||.++|++||++|
T Consensus 2 ~C~~-v~~~L~pCl~y~~~~---~-~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~-~~-~in~~~A~~LP~~C 73 (90)
T 1bwo_A 2 DCGH-VDSLVRPCLSYVQGG---P-G-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARG-IH-NLNEDNARSIPPKC 73 (90)
T ss_dssp CHHH-HHHHHGGGHHHHTTC---S-C-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTT-CT-TCCHHHHHTHHHHH
T ss_pred CHHH-HHHhhcccHHHHcCC---C-C-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhc-cC-CcCHHHHHHHHHHc
Confidence 6887 677999999999986 2 4 9999999999998543 359998665443 44 79999999999999
Q ss_pred cCCCC
Q 038771 102 NMGGV 106 (242)
Q Consensus 102 Gv~~p 106 (242)
|++.+
T Consensus 74 ~v~~p 78 (90)
T 1bwo_A 74 GVNLP 78 (90)
T ss_dssp TCCCS
T ss_pred CCCCC
Confidence 99875
No 6
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.35 E-value=1.1e-13 Score=105.91 Aligned_cols=70 Identities=24% Similarity=0.627 Sum_probs=56.9
Q ss_pred CChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-------CCceeeeeccCCCCCCCCChHHHhhhcccC
Q 038771 29 PCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-------MDCACLVITANVPLQLPINRTLSLSLPRAC 101 (242)
Q Consensus 29 ~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-------~~CLC~~~~a~~~~~~~IN~trAl~LP~aC 101 (242)
+|++ +...|.||++|++++ + . |+.+||++||++++.+ ..|+|++..... ++ +||.++|++||++|
T Consensus 2 ~C~~-v~~~L~pCl~yv~~~---~-~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~-~~-~in~~~A~~LP~~C 73 (91)
T 1siy_A 2 TCGQ-VQGNLAQCIGFLQKG---G-V-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGA-VR-GINPNNAEALPGKC 73 (91)
T ss_dssp CTTT-THHHHHHHHHHHTSC---S-C-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTC-CS-SCCHHHHHHHHHHH
T ss_pred CHHH-HHHhccCcHHHHhCC---C-C-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccc-cC-CcCHHHHHHHHHHc
Confidence 6888 677999999999986 2 4 9999999999997653 259998554332 44 79999999999999
Q ss_pred cCCCC
Q 038771 102 NMGGV 106 (242)
Q Consensus 102 Gv~~p 106 (242)
|++++
T Consensus 74 gv~~p 78 (91)
T 1siy_A 74 GVNIP 78 (91)
T ss_dssp TCCCS
T ss_pred CCCCC
Confidence 99875
No 7
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.35 E-value=3.9e-14 Score=108.76 Aligned_cols=70 Identities=27% Similarity=0.690 Sum_probs=57.5
Q ss_pred CCChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-------CCceeeeeccCCCCCCCCChHHHhhhccc
Q 038771 28 TPCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-------MDCACLVITANVPLQLPINRTLSLSLPRA 100 (242)
Q Consensus 28 ~~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-------~~CLC~~~~a~~~~~~~IN~trAl~LP~a 100 (242)
.+|++ +...|.||++|++++ + . |+ .||++||++++.+ ..|+|++..... ++ +||.++|++||++
T Consensus 2 ~~C~~-v~~~L~pCl~y~~~~---~-~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~-~~-~in~~~A~~LP~~ 72 (91)
T 1t12_A 2 ITCGQ-VTSNLAPCLAYLRNT---G-P-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGA-IS-GINLGKAAGLPST 72 (91)
T ss_dssp CCHHH-HHHHTHHHHHHHTTS---S-C-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHH-CT-TCCHHHHHHHHHH
T ss_pred CChHH-HHHhccCcHHHHcCC---C-C-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccc-cC-CcChhHHHHHHHH
Confidence 57988 677999999999986 3 5 88 9999999998753 359998654332 55 8999999999999
Q ss_pred CcCCCC
Q 038771 101 CNMGGV 106 (242)
Q Consensus 101 CGv~~p 106 (242)
||++.+
T Consensus 73 C~v~~p 78 (91)
T 1t12_A 73 CGVNIP 78 (91)
T ss_dssp TTCCCS
T ss_pred cCCCCC
Confidence 999875
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.33 E-value=1.4e-13 Score=100.19 Aligned_cols=64 Identities=19% Similarity=0.450 Sum_probs=54.4
Q ss_pred ChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCCCCceeeeeccCCCCCCCCChHHHhhhcccCcCCCC
Q 038771 30 CTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSMDCACLVITANVPLQLPINRTLSLSLPRACNMGGV 106 (242)
Q Consensus 30 C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a~~CLC~~~~a~~~~~~~IN~trAl~LP~aCGv~~p 106 (242)
|+. +.|.+|++|++++ ..|+.+||++||+. ..|+|.++++.. +..+||.++|++||++||++++
T Consensus 2 C~~---~~L~pC~~~v~~~-----~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 2 CQA---SQLAVCASAILSG-----AKPSGECCGNLRAQ----QGCFCQYAKDPT-YGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp CCS---STTHHHHHHHTTC-----CCCCHHHHHHHHHH----SSHHHHGGGCST-THHHHTCHHHHHHHHHHTSCCS
T ss_pred CCh---hhcccCHHHHcCC-----CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC
Confidence 655 5899999999985 57999999999984 689999887655 4446999999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.32 E-value=1.4e-13 Score=100.81 Aligned_cols=68 Identities=24% Similarity=0.519 Sum_probs=56.7
Q ss_pred CChhhhhcccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCCCCceeeeeccCCCCCCCCChHHHhhhcccCcCCCCcC
Q 038771 29 PCTTSMISSFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTSMDCACLVITANVPLQLPINRTLSLSLPRACNMGGVPV 108 (242)
Q Consensus 29 ~C~~sV~s~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a~~CLC~~~~a~~~~~~~IN~trAl~LP~aCGv~~pP~ 108 (242)
.|+. +.|.+|++|++++ ..|+.+||++||+. ..|+|.++++.. +..+||.++|++||++||++++
T Consensus 2 ~C~~---~~L~pC~~~v~~~-----~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P-- 66 (69)
T 1l6h_A 2 GCNA---GQLTVCTGAIAGG-----ARPTAACCSSLRAQ----QGCFCQFAKDPR-YGRYVNSPNARKAVSSCGIALP-- 66 (69)
T ss_dssp CSTT---TTHHHHHHHHTTC-----CSTTHHHHHHHHHH----HHHHHHHTTCSS-HHHHTTTTTGGGCCCCCSSCSC--
T ss_pred CCCh---hhcccCHHHHcCC-----CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC--
Confidence 4775 5899999999985 57999999999984 579999887654 4446999999999999999875
Q ss_pred CCC
Q 038771 109 QCK 111 (242)
Q Consensus 109 ~C~ 111 (242)
+|+
T Consensus 67 ~C~ 69 (69)
T 1l6h_A 67 TCH 69 (69)
T ss_dssp CCC
T ss_pred CCC
Confidence 574
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=92.04 E-value=0.033 Score=42.09 Aligned_cols=67 Identities=25% Similarity=0.566 Sum_probs=49.4
Q ss_pred ccccchhhhhCCCCCCCCCccHHHHHHHHHhhcCC-CCceeeeeccCCCCCCCCChHHHhhhc-ccCcCCCCcC-CCCC
Q 038771 37 SFTPCLNFITGSTSNGVTTPTQNCCDSLKSLMSTS-MDCACLVITANVPLQLPINRTLSLSLP-RACNMGGVPV-QCKA 112 (242)
Q Consensus 37 ~LtPClpYLtg~s~ngt~sPSs~CC~aLksl~~~a-~~CLC~~~~a~~~~~~~IN~trAl~LP-~aCGv~~pP~-~C~~ 112 (242)
+|--|.+-+.+. ..+...||.-++.+.+.+ ..|+|..++. +++ +|...+++|- ..||...|+. +|..
T Consensus 10 kLgvCanvL~g~-----~~~~~~CC~Ll~GL~dleAAvCLCtaik~---Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 10 DLSICLNILGGS-----LGTVDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CCGGGGGGGGTC-----CTTHHHHHHHHHTSCHHHHHHHHHHHHHH---HTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred chhHHHHHhCcC-----CCCCCccchhhhCcchhhhhhhhhhhccc---cce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence 577899888542 337789999999986544 3599998873 455 6777777754 6899998775 8863
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=67.82 E-value=0.27 Score=45.83 Aligned_cols=53 Identities=21% Similarity=0.550 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhcCCCCceeeeeccCCC--C-------CCCCChHHHhhhcccCcCCCCcCCCCC
Q 038771 58 QNCCDSLKSLMSTSMDCACLVITANVP--L-------QLPINRTLSLSLPRACNMGGVPVQCKA 112 (242)
Q Consensus 58 s~CC~aLksl~~~a~~CLC~~~~a~~~--~-------~~~IN~trAl~LP~aCGv~~pP~~C~~ 112 (242)
.+||+.|+.+-+ .+.|.|..+..... . ....=..+|..||..||+. .|.+|.-
T Consensus 429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~~c~~ 490 (500)
T 3ob4_A 429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQRCDL 490 (500)
T ss_dssp HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCSCCCC
T ss_pred HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCccCCc
Confidence 789999998721 16899988753110 0 0011134599999999997 4568985
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=47.54 E-value=8 Score=29.69 Aligned_cols=80 Identities=23% Similarity=0.488 Sum_probs=50.5
Q ss_pred CCCChhhhhc-c-cccchhhhhCCCCC--C----C--CCccHHHHHHHHHhhcCCCCceeeeeccCC--CCC---CCCCh
Q 038771 27 TTPCTTSMIS-S-FTPCLNFITGSTSN--G----V--TTPTQNCCDSLKSLMSTSMDCACLVITANV--PLQ---LPINR 91 (242)
Q Consensus 27 a~~C~~sV~s-~-LtPClpYLtg~s~n--g----t--~sPSs~CC~aLksl~~~a~~CLC~~~~a~~--~~~---~~IN~ 91 (242)
...|...+.. . |..|..||.-.... + . ...-..||+-|+.+ +..|.|..+.... .+. ..-.+
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~ 84 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM 84 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence 3568776432 5 89999999742100 0 0 12357899999985 5789999885321 121 01124
Q ss_pred HHHhhhcccCcCCCCcCCCC
Q 038771 92 TLSLSLPRACNMGGVPVQCK 111 (242)
Q Consensus 92 trAl~LP~aCGv~~pP~~C~ 111 (242)
.+|..||..|||. +..|+
T Consensus 85 q~A~~LP~~C~i~--p~~C~ 102 (103)
T 1s6d_A 85 SMAHNLPIECNLM--SQPCQ 102 (103)
T ss_dssp HHHHHHHHHTTSS--SSCSC
T ss_pred HHHHhcHHhcCCC--cccCC
Confidence 5688999999995 44564
No 13
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=41.52 E-value=2.5 Score=30.73 Aligned_cols=54 Identities=20% Similarity=0.394 Sum_probs=35.6
Q ss_pred CccHHHHHHHHHhhcCCCCceeeeeccCC-------CCCC---CCChHHHhhhcccCcCCCCcCCCCC
Q 038771 55 TPTQNCCDSLKSLMSTSMDCACLVITANV-------PLQL---PINRTLSLSLPRACNMGGVPVQCKA 112 (242)
Q Consensus 55 sPSs~CC~aLksl~~~a~~CLC~~~~a~~-------~~~~---~IN~trAl~LP~aCGv~~pP~~C~~ 112 (242)
..-..||+-|+.+ +..|.|..+..-. .++- .-.+.+|..||..||+.. +..|.-
T Consensus 9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~-~~~C~~ 72 (75)
T 1pnb_B 9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-IGTCPF 72 (75)
T ss_dssp SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTT-TCCCCC
T ss_pred HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCC-CCCCCc
Confidence 3457999999986 5679998875321 0110 112457889999999953 246763
No 14
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=28.63 E-value=3.8 Score=31.52 Aligned_cols=71 Identities=20% Similarity=0.452 Sum_probs=42.7
Q ss_pred cccchhhhhCCCC-CCC-CC-------c--cHHHHHHHHHhhcCCCCceeeeeccCC-------CCC---CCCChHHHhh
Q 038771 38 FTPCLNFITGSTS-NGV-TT-------P--TQNCCDSLKSLMSTSMDCACLVITANV-------PLQ---LPINRTLSLS 96 (242)
Q Consensus 38 LtPClpYLtg~s~-ngt-~s-------P--Ss~CC~aLksl~~~a~~CLC~~~~a~~-------~~~---~~IN~trAl~ 96 (242)
|.+|..|+.-... .+- .. + -..||+.|+.+ +..|.|..+.... .++ ..-.+.+|..
T Consensus 15 L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~ 91 (109)
T 1sm7_A 15 LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKN 91 (109)
T ss_dssp CSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence 8899999972100 000 01 1 36899999985 4679999885311 011 0012345888
Q ss_pred hcccCcCCCCcCCCCC
Q 038771 97 LPRACNMGGVPVQCKA 112 (242)
Q Consensus 97 LP~aCGv~~pP~~C~~ 112 (242)
||..|||.. +..|.-
T Consensus 92 LP~~Cnl~~-~~~C~~ 106 (109)
T 1sm7_A 92 LPNVCNMKQ-IGTCPF 106 (109)
T ss_dssp HHHHSCCCS-SCSSCC
T ss_pred CHHhcCCCC-CCCCCC
Confidence 999999963 236763
No 15
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=25.86 E-value=12 Score=29.88 Aligned_cols=84 Identities=23% Similarity=0.526 Sum_probs=51.6
Q ss_pred CCCChhhhh-cccccchhhhhCCCCCCCC------C-------ccHHHHHHHHHhhcCCCCceeeeeccCC-----CCC-
Q 038771 27 TTPCTTSMI-SSFTPCLNFITGSTSNGVT------T-------PTQNCCDSLKSLMSTSMDCACLVITANV-----PLQ- 86 (242)
Q Consensus 27 a~~C~~sV~-s~LtPClpYLtg~s~ngt~------s-------PSs~CC~aLksl~~~a~~CLC~~~~a~~-----~~~- 86 (242)
...|...+. ..|..|..||.-....... . .-..||+-|+.+. ++..|.|..+.... .+.
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~g 91 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQD 91 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTTT
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhhh
Confidence 457877643 3689999999842100000 0 1367999999863 35789998875321 011
Q ss_pred CCCC---hHHHhhhcccCcCCCCcCCCCC
Q 038771 87 LPIN---RTLSLSLPRACNMGGVPVQCKA 112 (242)
Q Consensus 87 ~~IN---~trAl~LP~aCGv~~pP~~C~~ 112 (242)
--.. +.+|..||..|||..+ ..|.-
T Consensus 92 qq~~~~~~q~A~~LP~~C~i~~~-~~C~~ 119 (127)
T 1w2q_A 92 RQMVQQFKRELMSLPQQCNFRAP-QRCDL 119 (127)
T ss_dssp STTHHHHHHHHHHHHHHHTCCCS-SCCSC
T ss_pred HHHHHHHHHHHHHhHHhcCCCCC-CcCCC
Confidence 1122 3568899999999532 35764
No 16
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=22.48 E-value=26 Score=28.11 Aligned_cols=73 Identities=21% Similarity=0.525 Sum_probs=43.4
Q ss_pred ccccchhhhhCC-CCCCCCCc----cHHHHHHHHHhhcCCCCceeeeeccCC--CC---------C-CCCC--------h
Q 038771 37 SFTPCLNFITGS-TSNGVTTP----TQNCCDSLKSLMSTSMDCACLVITANV--PL---------Q-LPIN--------R 91 (242)
Q Consensus 37 ~LtPClpYLtg~-s~ngt~sP----Ss~CC~aLksl~~~a~~CLC~~~~a~~--~~---------~-~~IN--------~ 91 (242)
.|..|..||..- -+.+...| -..||+-|+++ +..|.|..+..-. .+ + ++.- .
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~ 92 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR 92 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence 577899999521 00010223 35699999985 4679998774210 00 0 0111 3
Q ss_pred HHHhhh--cccCcCCCCcC--CCCC
Q 038771 92 TLSLSL--PRACNMGGVPV--QCKA 112 (242)
Q Consensus 92 trAl~L--P~aCGv~~pP~--~C~~ 112 (242)
..|..| |..||+..+.. .|..
T Consensus 93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 93 GFAATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp HHHTTTTSTTTTCCCCTTSSSCCTT
T ss_pred HHHHhcCCcccCCCCCCCCCCCCCc
Confidence 358889 99999976642 5654
Done!